Pregenerated sensors for GRPEL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029198Ensembl transcript IDs: ENSMUST00000031099.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACGGAGCAGGAGCAGCCAGGGCAAGACTAAGATAGCAGGTAACTaGGCACATGACTGGGTGGTAGGCAGCATGGTCGGGTTAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: ERSRSSQGKTKIAGN*AHDWVVGSMVGLEE Trigger: CTCTTCTAACCCGACCATGCTGCCTACCACCCAGTCATGTGCCCAGTTACCTGCTATCTTAGTCTTGCCCTGGCTGCTCCTGCTCCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 90 bp | TTGTGGTTTAGTGGGACTCCTCTCCCTGCATGGGTTTCCAGAGACTaGACTCAGGTCATTAGGCTTGGCAGCGGGCACCTTTCCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LWFSGTPLPAWVSRD*TQVIRLGSGHLSWL Trigger: CAGCCAGGAAAGGTGCCCGCTGCCAAGCCTAATGACCTGAGTTCAGTCTCTGGAAACCCATGCAGGGAGAGGAGTCCCACTAAACCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 90 bp | ACAAAACAGAATACCCCTACCTCTGTGGCTTTGCCTGTTCTGCCCTaGCTTCTACACAAGGGTATACTCAAGGCCGTACTCACTGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: TKQNTPTSVALPVLP*LLHKGILKAVLTAV Trigger: GACAGCAGTGAGTACGGCCTTGAGTATACCCTTGTGTAGAAGCCAGGGCAGAACAGGCAAAGCCACAGAGGTAGGGGTATTCTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 90 bp | CAAAGTGCCAAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTaGCTCTGGCTAGCCAAACTCAACAACTTTGCCAGCTATGACCTT | + |
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Preference number: 1 (lower is better) Translates to: QSAKDDFHGAGPISS*LWLAKLNNFASYDL Trigger: AAGGTCATAGCTGGCAAAGTTGTTGAGTTTGGCTAGCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTTGGCACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 90 bp | ATATGCACTCTTGAAGGTCTTATTTTCGCTGGCAACAAGTGTTCCTaGTCTGGCTCTTCCCTTCCAGTGCCTTGGTACTCAGAGGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: ICTLEGLIFAGNKCS*SGSSLPVPWYSEVD Trigger: GTCTACCTCTGAGTACCAAGGCACTGGAAGGGAAGAGCCAGAGCAGGAACACTTGTTGCCAGCGAAAATAAGACCTTCAAGAGTGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 90 bp | TCTGCCCTGGCTTCTACACAAGGGTATACTCAAGGCCGTACTCACTaGTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SALASTQGYTQGRTH*CRMASFTSPFHQLF Trigger: GAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCCTTGAGTATACCCTTGTGTAGAAGCCAGGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 90 bp | CCTCTGAAAGATTGTCTTCAGTCTGACATGGAGCTGACGAGACCTTaGAGAGCTCTGTGCTGTTCAGCAGCTTTAGCTGAAAAGGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: PLKDCLQSDMELTRP*RALCCSAALAEKES Trigger: AGACTCCTTTTCAGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTCAGACTGAAGACAATCTTTCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 90 bp | TGTATTCACTTATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTaGCCTCCACCTGGCTATTGTTTTGTTTCAATAGTTCAAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: CIHLCNVKALPLLSG*PPPGYCFVSIVQGS Trigger: GCTGCCTTGAACTATTGAAACAAAACAATAGCCAGGTGGAGGGCAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 90 bp | ATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTGCCCTCCACCTaGCTATTGTTTTGTTTCAATAGTTCAAGGCAGCTTAAAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: MQCEGTASAVRLPST*LLFCFNSSRQLKGR Trigger: TCTTCCTTTAAGCTGCCTTGAACTATTGAAACAAAACAATAGCCAGGTGGAGGGCAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 90 bp | TGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTTTCTaGGCTTGCAATAACAGGGAAGAATCTTTTGGCTGGTGGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: CCRMASFTSPFHQLF*ACNNREESFGWWEP Trigger: AGGCTCCCACCAGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 90 bp | CTTCTACACAAGGGTATACTCAAGGCCGTACTCACTGCTGTCGCATaGCTTCCTTTACATCACCATTTCATCAGCTTTTCTGAGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: LLHKGILKAVLTAVA*LPLHHHFISFSELA Trigger: TGCAAGCTCAGAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCCTTGAGTATACCCTTGTGTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 90 bp | CATTTCAGAGCCAGGGCAGGTGTCCAAATCTCAGGACTTTTACACTaGCTTGTAAAGGAATATGCACTCTTGAAGGTCTTATTTTCGCTG | + |
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Preference number: 1 (lower is better) Translates to: HFRARAGVQISGLLH*LVKEYALLKVLFSL Trigger: CAGCGAAAATAAGACCTTCAAGAGTGCATATTCCTTTACAAGTCAGTGTAAAAGTCCTGAGATTTGGACACCTGCCCTGGCTCTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 90 bp | TTTTACATTAAATTGTTGAGAACAGAGTTGTGTCTGTTTGCTTCTTaGTCCTCCAACTTCTCAGCACACTCTGCTGTTAAACCAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: FYIKLLRTELCLFAS*SSNFSAHSAVKPAS Trigger: AGAAGCTGGTTTAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACTCTGTTCTCAACAATTTAATGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCATGGGTTTCCAGAGACTGAACTCAGGTCATTAGGCTTGGCAGCGGGCTGGCTGGCCAGAAAGTaGGCAGAGTGTCACTATGAG | + |
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Preference number: 2 (lower is better) Translates to: SLHGFPETELRSLGLAAGWLARK*AECHYE Trigger: CTCATAGTGACACTCTGCCCACTTTCTGGCCAGCCA...GCCCGCTGCCAAGCCTAATGACCTGAGTTCAGTCTCTGGAAACCCATGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | GACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTTTAGCTTGTGTGTCGTGGCTTTaGCTGCCTGGCTTTCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DMELTRPCRALCCSAALACVSWL*LPGFLP Trigger: TGGGAGAAAGCCAGGCAGCCAAAGCCACGACACACA...AGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR GCA 90 bp | GACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTTTAGCTGGCAACAAGTGTTCCTaGTCTGGCTCTTCCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: DMELTRPCRALCCSAALAGNKCS*SGSSLP Trigger: TGGAAGGGAAGAGCCAGAGCAGGAACACTTGTTGCC...AGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCATGGGTTTCCAGAGACTGAACTCAGGTCATTAGGCTTGGCAGCGGGCAAGATAGCAGGTAACTaGGCACATGACTGGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SLHGFPETELRSLGLAAGKIAGN*AHDWVV Trigger: TACCACCCAGTCATGTGCCCAGTTACCTGCTATCTT...GCCCGCTGCCAAGCCTAATGACCTGAGTTCAGTCTCTGGAAACCCATGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGCCAAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTGCCTCTGGCATACCCCTACCTCTGTaGCTTTGCCTGTTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KVPKMISMEQGPFPAASGIPLPL*LCLFCP Trigger: AGGGCAGAACAGGCAAAGCCACAGAGGTAGGGGTAT...GCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTTGGCACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | CTAATGGTGTATTCACTTATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTGGTGGCTTTGGCTGCCTaGCTTTCTCCCATGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LMVYSLMQCEGTASAVRLVALAA*LSPMSC Trigger: ACAGCTCATGGGAGAAAGCCAGGCAGCCAAAGCCAC...CAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACACCATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGCCAAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTGCCTCTGGCGATAAGAAAGAACCCTaGCCAGGTATAGTGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KVPKMISMEQGPFPAASGDKKEP*PGIVQA Trigger: TGCTTGCACTATACCTGGGCAGGGTTCTTTCTTATC...GCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTTGGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | CTCATGTGTGTCGTGGCTTTGGCTGCCTGGCTTTCTCCCATGAGCTGTATTATATCCCTTCCAGTGCCTTaGTACTCAGAGGTAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: LMCVVALAAWLSPMSCIISLPVP*YSEVDC Trigger: ACAGTCTACCTCTGAGTACCAAGGCACTGGAAGGGA...TATAATACAGCTCATGGGAGAAAGCCAGGCAGCCAAAGCCACGACACACATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTTTCTGAGCCAAGTGTTCCTGCTCTaGCTCTTCCCTTCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLLSHGFLYITISSAFLSQVFLL*LFPSSA Trigger: GGCACTGGAAGGGAAGAGCCAGAGCAGGAACACTTG...GCTCAGAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR TCA 90 bp | CTCATGTGTGTCGTGGCTTTGGCTGCCTGGCTTTCTCCCATGAGCTGTATTATAACTGTGTTCAGATGCTaGCTACTGTGCTGGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: LMCVVALAAWLSPMSCIITVFRC*LLCWRS Trigger: AGATCTCCAGCACAGTAGTCAGCATCTGAACACAGT...TATAATACAGCTCATGGGAGAAAGCCAGGCAGCCAAAGCCACGACACACATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTATGGGACTCCTCTCCCTaGATGGGTTTCCAGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLWDSSP*MGFQRL Trigger: CAGTCTCTGGAAACCCATGCAGGGAGAGGAGTCCCA...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAGCCCCAAGCTTGAAGAGCTGTGAGCTGAGTAAGCCAGGGTTTCTCCTCGCTTTACAGTCAATATaGTCTATCTGGATAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SAAPSLKSCELSKPGFLLALQSI*SIWIGL Trigger: AAGCCCTATCCAGATAGACCATATTGACTGTAAAGC...GAGGAGAAACCCTGGCTTACTCAGCTCACAGCTCTTCAAGCTTGGGGCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGCCAAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTGCCTCTGGCGAGACTTCATTATTGTaGTTTAGTGGGACTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KVPKMISMEQGPFPAASGETSLL*FSGTPL Trigger: GAGAGGAGTCCCACTAAACCACAATAATGAAGTCTC...GCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTTGGCACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTGTGATGATGGAAGCTTaGATTTGGGGAAAATTACTT | + |
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Preference number: 2 (lower is better) Translates to: QSDMELTRPCRALCCSAAVMMEA*IWGKLL Trigger: AAGTAATTTTCCCCAAATTCAAGCTTCCATCATCAC...AGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTCAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | GACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTTTAGCTGTACTAATCACCAGGTaGAACAGATACAATGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: DMELTRPCRALCCSAALAVLITR*NRYNVS Trigger: GCTAACATTGTATCTGTTCCACCTGGTGATTAGTAC...AGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CAA 90 bp | CATTTCATCAGCTTTTCTGAGCTTGCAATAACAGGGAAGAATCTTTaGGCTGGTGGGAGCCTAAAGTCAGCTTCTCATGTGTGTCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HFISFSELAITGKNL*AGGSLKSASHVCRG Trigger: GCCACGACACACATGAGAAGCTGACTTTAGGCTCCCACCAGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCGTACTCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTAGGAATATGCACTCTTaGAGGTCTTATTTTCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GRTHCCRMASFTSPFHQLRNMHS*RSYFRW Trigger: CCAGCGAAAATAAGACCTTCAAGAGTGCATATTCCT...AAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CAA 90 bp | TGTTCAAATTTAGTAACAAAACAGAATACCCCTACCTCTGTGGCTTaGCCTGTTCTGCCCTGGCTTCTACACAAGGGTATACTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: CSNLVTKQNTPTSVA*PVLPWLLHKGILKA Trigger: GGCCTTGAGTATACCCTTGTGTAGAAGCCAGGGCAGAACAGGCAAAGCCACAGAGGTAGGGGTATTCTGTTTTGTTACTAAATTTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTATCCAGTACCAGAAAGTaGGAAGATAAAAGACGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLSSTRK*EDKRRA Trigger: GGCTCGTCTTTTATCTTCCCACTTTCTGGTACTGGA...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 72 bp | AGGAGCAGCCAGGGCAAGACTAAGATAGCAGGTAACTaGGCACATGACTGGGTGGTAGGCAGCATGGTCGGG | + |
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Preference number: 3 (lower is better) Translates to: RSSQGKTKIAGN*AHDWVVGSMVG Trigger: CCCGACCATGCTGCCTACCACCCAGTCATGTGCCCAGTTACCTGCTATCTTAGTCTTGCCCTGGCTGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTGACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTATGTGTGTCGTGGCTTaGGCTGCCTGGCTTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QSDMELTRPCRALCCSAAMCVVA*AAWLSP Trigger: GGGAGAAAGCCAGGCAGCCAAAGCCACGACACACAT...AGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 72 bp | AGTGGGACTCCTCTCCCTGCATGGGTTTCCAGAGACTaGACTCAGGTCATTAGGCTTGGCAGCGGGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: SGTPLPAWVSRD*TQVIRLGSGHL Trigger: AAGGTGCCCGCTGCCAAGCCTAATGACCTGAGTTCAGTCTCTGGAAACCCATGCAGGGAGAGGAGTCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 72 bp | TTCTGTCACCTGATCAGCCAATGGCTGGCCAGAAAGTaGGCAGAGTGTCACTATGAGGTTGAACGGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: FCHLISQWLARK*AECHYEVERSR Trigger: CCTGCTCCGTTCAACCTCATAGTGACACTCTGCCCACTTTCTGGCCAGCCATTGGCTGATCAGGTGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 72 bp | AACAGAATACCCCTACCTCTGTGGCTTTGCCTGTTCTaGCCTGGCTTCTACACAAGGGTATACTCAAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: NRIPLPLWLCLF*PGFYTRVYSRP Trigger: CGGCCTTGAGTATACCCTTGTGTAGAAGCCAGGGCAGAACAGGCAAAGCCACAGAGGTAGGGGTATTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CAA 90 bp | GGCCGTACTCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTTCTGCAGCCCCAAGCTaGAAGAGCTGTGAGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GRTHCCRMASFTSPFHQLSAAPS*KSCELS Trigger: ACTCAGCTCACAGCTCTTCAAGCTTGGGGCTGCAGA...AAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 72 bp | AGGTCATTAGGCTTGGCAGCGGGCACCTTTCCTGGCTaGGTAATCTTGCTGGCCTCTGAAAGATTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RSLGLAAGTFPG*VILLASERLSS Trigger: TGAAGACAATCTTTCAGAGGCCAGCAAGATTACTCAGCCAGGAAAGGTGCCCGCTGCCAAGCCTAATGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 72 bp | AAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTaGCTCTGGCTAGCCAAACTCAACAACTTTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: KDDFHGAGPISS*LWLAKLNNFAS Trigger: GCTGGCAAAGTTGTTGAGTTTGGCTAGCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR-3UTR CAA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTAGGAGCTGACGAGACCTaGCAGAGCTCTGTGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLGADET*QSSVLF Trigger: GAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCC...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 72 bp | GAAAAGGAGTCTAATGGTGTATTCACTTATGCAATGTaGAGGCACTGCCTCTGCTGTCAGGCTGCCCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: EKESNGVFTYAM*RHCLCCQAALH Trigger: GTGGAGGGCAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACACCATTAGACTCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR TCA 72 bp | GTAATCTTGCTGGCCTCTGAAAGATTGTCTTCAGTCTaGCATGGAGCTGACGAGACCTTGCAGAGCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VILLASERLSSV*HGADETLQSSV Trigger: CACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTCAGACTGAAGACAATCTTTCAGAGGCCAGCAAGATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 72 bp | CCCAGAGTCCCTGACTGTGCAAGCAGCTTCATGTTCTaGTTAGCTTACTTAAGATTTCCAACAAGGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PRVPDCASSFMF*LAYLRFPTRLG Trigger: GCCCAGCCTTGTTGGAAATCTTAAGTAAGCTAAGCAGAACATGAAGCTGCTTGCACAGTCAGGGACTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 72 bp | TCTGACATGGAGCTGACGAGACCTTGCAGAGCTCTGTaGTGTTCAGCAGCTTTAGCTGAAAAGGAGTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: SDMELTRPCRAL*CSAALAEKESN Trigger: ATTAGACTCCTTTTCAGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 72 bp | TTGTGTAAAATCGCTTTCTGTCACCTGATCAGCCAATaGCTGGCCAGAAAGTGGGCAGAGTGTCACTATGAG | + |
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Preference number: 3 (lower is better) Translates to: LCKIAFCHLISQ*LARKWAECHYE Trigger: CTCATAGTGACACTCTGCCCACTTTCTGGCCAGCCATTGGCTGATCAGGTGACAGAAAGCGATTTTACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR GCA 72 bp | GCTTCTACACAAGGGTATACTCAAGGCCGTACTCACTaGTGTCGCATGGCTTCCTTTACATCACCATTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ASTQGYTQGRTH*CRMASFTSPFH Trigger: ATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCCTTGAGTATACCCTTGTGTAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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| 3UTR CCA 72 bp | AGTCAGCTTCTCATGTGTGTCGTGGCTTTGGCTGCCTaGCTTTCTCCCATGAGCTGTATTATAACTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: SQLLMCVVALAA*LSPMSCIITVC Trigger: ACATACAGTTATAATACAGCTCATGGGAGAAAGCCAGGCAGCCAAAGCCACGACACACATGAGAAGCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CCA 72 bp | CAAGTGGCTCCTACAAAACAGCAGGCACTGTCTCCATaGATCTGTGCAGTCTCCATAATGCCATACAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: QVAPTKQQALSP*ICAVSIMPYKL Trigger: AAGTTTGTATGGCATTATGGAGACTGCACAGATCCATGGAGACAGTGCCTGCTGTTTTGTAGGAGCCACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR GCA 72 bp | TTCCCTTCCAGTGCCTTGGTACTCAGAGGTAGACTGTaGAGCATAGATATAGCCAAAGACCTTTTATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPSSALVLRGRL*SIDIAKDLLFV Trigger: CACAAATAAAAGGTCTTTGGCTATATCTATGCTGCACAGTCTACCTCTGAGTACCAAGGCACTGGAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CCA 72 bp | GCCAGCCATGCAGCTTTACAGTCAATATGGTCTATCTaGATAGGGCTTGATGTCCTTAGCAACTACTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASHAALQSIWSI*IGLDVLSNYLV Trigger: AACTAAGTAGTTGCTAAGGACATCAAGCCCTATCCAGATAGACCATATTGACTGTAAAGCTGCATGGCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CCA 72 bp | TTTAAGCATGCCAGCCATGCAGCTTTACAGTCAATATaGTCTATCTGGATAGGGCTTGATGTCCTTAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKHASHAALQSI*SIWIGLDVLSN Trigger: GTTGCTAAGGACATCAAGCCCTATCCAGATAGACCATATTGACTGTAAAGCTGCATGGCTGGCATGCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR TCA 72 bp | GGTTTCTCCTCAGGAGCCTACCAGATCTCCATTAGATaGCAAAATCCAGTACCAGAAAGTGGGAAGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFSSGAYQISIR*QNPVPESGKIK Trigger: TTTTATCTTCCCACTTTCTGGTACTGGATTTTGTCATCTAATGGAGATCTGGTAGGCTCCTGAGGAGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR TCA 72 bp | ATGGCTTCCTTTACATCACCATTTCATCAGCTTTTCTaGGCTTGCAATAACAGGGAAGAATCTTTTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MASFTSPFHQLF*ACNNREESFGW Trigger: CCAGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR TCA 72 bp | AAATTGTTGAGAACAGAGTTGTGTCTGTTTGCTTCTTaGTCCTCCAACTTCTCAGCACACTCTGCTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLLRTELCLFAS*SSNFSAHSAVK Trigger: TTTAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACTCTGTTCTCAACAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR GCA 72 bp | AATCTCAGGACTTTTACACTGACTTGTAAAGGAATATaGACTCTTGAAGGTCTTATTTTCGCTGGCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLRTFTLTCKGI*TLEGLIFAGNK Trigger: CTTGTTGCCAGCGAAAATAAGACCTTCAAGAGTGCATATTCCTTTACAAGTCAGTGTAAAAGTCCTGAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CCA 72 bp | AAGACCTTTTATTTGTGTAAAGTACTAATCACCAGGTaGAACAGATACAATGTTAGCATACTACTCCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTFYLCKVLITR*NRYNVSILLPR Trigger: CCTCGGGAGTAGTATGCTAACATTGTATCTGTTCCACCTGGTGATTAGTACTTTACACAAATAAAAGGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CAA 72 bp | GGCTGGCCAGAAAGTGGGCAGAGTGTCACTATGAGGTaGAACGGAGCAGGAGCAGCCAGGGCAAGACTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWPESGQSVTMR*NGAGAARARLR Trigger: TCTTAGTCTTGCCCTGGCTGCTCCTGCTCCGTTCAACCTCATAGTGACACTCTGCCCACTTTCTGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR GCA 90 bp | GTTGAACGGAGCAGGAGCAGCCAGGGCAAGACTAAGATAGCAGGTAACTGGGCACAGGAGGGTCTTGTCTaGAGAGGGTGGATCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VERSRSSQGKTKIAGNWAQEGLV*RGWICL Trigger: AAGACAGATCCACCCTCTGCAGACAAGACCCTCCTG...TGCCCAGTTACCTGCTATCTTAGTCTTGCCCTGGCTGCTCCTGCTCCGTTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR GCA 90 bp | GTTGAACGGAGCAGGAGCAGCCAGGGCAAGACTAAGATAGCAGGTAACTGGGCACTTCTCCAGGATGTCTaGAACCTCCAGCAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VERSRSSQGKTKIAGNWALLQDV*NLQQVL Trigger: AAGGACTTGCTGGAGGTTGCAGACATCCTGGAGAAG...TGCCCAGTTACCTGCTATCTTAGTCTTGCCCTGGCTGCTCCTGCTCCGTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGCCCCAAGCTTGAAGAGCTGTGAGCTGAGTAAGCCAGGGTTTCTCCTCGCTGATCTCCTCCTTTaGAACACTCTGGGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAPSLKSCELSKPGFLLADLLL*NTLGCL Trigger: AAGGCAACCCAGAGTGTTCCAAAGGAGGAGATCAGC...GAGGAGAAACCCTGGCTTACTCAGCTCACAGCTCTTCAAGCTTGGGGCTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | AAAGTGCCAAAGATGATTTCCATGGAGCAGGGCCCATTTCCAGCTGCCTCTGGCTCCTCTACCAGCTTCTaGCTTCTCTGCCGTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KVPKMISMEQGPFPAASGSSTSF*LLCRRF Trigger: GAATCTACGGCAGAGAAGCCAGAAGCTGGTAGAGGA...GCCAGAGGCAGCTGGAAATGGGCCCTGCTCCATGGAAATCATCTTTGGCACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | CTAATGGTGTATTCACTTATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTGCCCTCCACAGGGGTGTaGAACAAGGCCTCATGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LMVYSLMQCEGTASAVRLPSTGV*NKASCS Trigger: CGAACATGAGGCCTTGTTCCACACCCCTGTGGAGGG...CAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACACCATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | CACCATTTCATCAGCTTTTCTGAGCTTGCAATAACAGGGAAGAATCTTTTGGCTCACCCCCACCAAAGCTaGCCTCAGGGTGCGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHFISFSELAITGKNLLAHPHQS*PQGASV Trigger: CACGGACGCACCCTGAGGCCAGCTTTGGTGGGGGTG...AGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR TCA 90 bp | GGCCGTACTCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTGAGGGTTGTTGTTGCTaGTCTCCTCCTTTGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRTHCCRMASFTSPFHQLEGCCC*SPPLEH Trigger: GTGTTCCAAAGGAGGAGATCAGCAACAACAACCCTC...AAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGCCCCAAGCTTGAAGAGCTGTGAGCTGAGTAAGCCAGGGTTTCTCCTCTTTGTGAACACCTTCTaGATCTGGACTTCAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SAAPSLKSCELSKPGFLLFVNTF*IWTSVI Trigger: GATGACTGAAGTCCAGATTCAGAAGGTGTTCACAAA...GAGGAGAAACCCTGGCTTACTCAGCTCACAGCTCTTCAAGCTTGGGGCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | GGCCGTACTCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTCTTGTCTGCAGAGGGTaGATCTGTCTTTGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRTHCCRMASFTSPFHQLLVCRG*ICLWLT Trigger: TGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAG...AAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGAGTACGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTGTCGCATGGCTTCCTTTACATCACCATTTCATCAGCTTTTCTGAGCGAACTTGGCCCCAATTaGGTCAAGCCTGAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSHGFLYITISSAFLSELGPN*VKPEQA Trigger: GGCTTGCTCAGGCTTGACCCAATTGGGGCCAAGTTC...GCTCAGAAAAGCTGATGAAATGGTGATGTAAAGGAAGCCATGCGACAGCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CAA 72 bp | CAAGTGTTCCTGCTCTGGCTCTTCCCTTCCAGTGCCTaGGTACTCAGAGGTAGACTGTGCAGCATAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: QVFLLWLFPSSA*VLRGRLCSIDI Trigger: TATATCTATGCTGCACAGTCTACCTCTGAGTACCAAGGCACTGGAAGGGAAGAGCCAGAGCAGGAACACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | CTAATGGTGTATTCACTTATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTGGGGTGGATCTGTCTTTaGCTCACAATGACCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMVYSLMQCEGTASAVRLGWICL*LTMTQV Trigger: GACTTGGGTCATTGTGAGCCAAAGACAGATCCACCC...CAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACACCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | CTAAATTCAGTGACCAGACTCCCAGAGTCCCTGACTGTGCAAGCAGCTTCATGTTCCTTGCAGAAACCCTaGATGCCATATAACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNSVTRLPESLTVQAASCSLQKP*MPYNLA Trigger: GGCCAAGTTATATGGCATCCAGGGTTTCTGCAAGGA...ACATGAAGCTGCTTGCACAGTCAGGGACTCTGGGAGTCTGGTCACTGAATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTATGGAACACTCTGGGTTaGCTTCTCCAGGATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLWNTLG*LLQDVC Trigger: GCAGACATCCTGGAGAAGGCAACCCAGAGTGTTCCA...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTATCCTTTGGAACACTCTaGGTTGCCTTCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLSFGTL*VAFSRM Trigger: CATCCTGGAGAAGGCAACCCAGAGTGTTCCAAAGGA...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | CACCATTTCATCAGCTTTTCTGAGCTTGCAATAACAGGGAAGAATCTTTTGGCTCGTAAGGGTCGAACTTaGCCCCAATTGGGTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHFISFSELAITGKNLLARKGRT*PQLGQA Trigger: GGCTTGACCCAATTGGGGCCAAGTTCGACCCTTACG...AGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTGTCTGTTTGCTTCTTGATCCTCCAACTTCTCAGCACACTCTGCTGTTAGGATGCCATATAACTTaGCCTCCTCTACCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCVCLLLDPPTSQHTLLLGCHIT*PPLPAS Trigger: AGAAGCTGGTAGAGGAGGCCAAGTTATATGGCATCC...TAACAGCAGAGTGTGCTGAGAAGTTGGAGGATCAAGAAGCAAACAGACACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CAA 72 bp | AGCTTTTCTGAGCTTGCAATAACAGGGAAGAATCTTTaGGCTGGTGGGAGCCTAAAGTCAGCTTCTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSELAITGKNL*AGGSLKSASHV Trigger: CACATGAGAAGCTGACTTTAGGCTCCCACCAGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| 3UTR CAA 72 bp | TTAGTAACAAAACAGAATACCCCTACCTCTGTGGCTTaGCCTGTTCTGCCCTGGCTTCTACACAAGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LVTKQNTPTSVA*PVLPWLLHKGI Trigger: TATACCCTTGTGTAGAAGCCAGGGCAGAACAGGCAAAGCCACAGAGGTAGGGGTATTCTGTTTTGTTACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR GCA 90 bp | CACCATTTCATCAGCTTTTCTGAGCTTGCAATAACAGGGAAGAATCTTTTGGCTATGGTCTCTCTCAGCTaGTCTTCCAGCTTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHFISFSELAITGKNLLAMVSLS*SSSFAF Trigger: GAAGGCAAAGCTGGAAGAGCAGCTGAGAGAGACCAT...AGCCAAAAGATTCTTCCCTGTTATTGCAAGCTCAGAAAAGCTGATGAAATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAATAACAGGGAAGAATCTTTTGGCTGGTGGGAGCCTAAAGTCAGCTTCGTTTGTATTTTTCCATaGTCTCTCTCAGCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACNNREESFGWWEPKVSFVCIFP*SLSAAL Trigger: AAGAGCAGCTGAGAGAGACCATGGAAAAATACAAAC...GAAGCTGACTTTAGGCTCCCACCAGCCAAAAGATTCTTCCCTGTTATTGCAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS CCA 90 bp | CTTCTCTTCCAGGAGGGTCTTGTCTGCAGAGGGTGGATCTGTCTTTaGCTCACAATGACCCAAGTCCTCGTCCAGGTTCTGGCCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLFQEGLVCRGWICL*LTMTQVLVQVLAIV Trigger: AACAATGGCCAGAACCTGGACGAGGACTTGGGTCATTGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAGACCCTCCTGGAAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CAA 90 bp | GTTGAACGGAGCAGGAGCAGCCAGGGCAAGACTAAGATAGCAGGTAACTGGGCATGGATGCCATATAACTaGGCCTCCTCTACCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VERSRSSQGKTKIAGNWAWMPYN*ASSTSF Trigger: GAAGCTGGTAGAGGAGGCCAAGTTATATGGCATCCA...TGCCCAGTTACCTGCTATCTTAGTCTTGCCCTGGCTGCTCCTGCTCCGTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CAA 90 bp | GACATGGAGCTGACGAGACCTTGCAGAGCTCTGTGCTGTTCAGCAGCTTTAGCTTTGGAACACTCTGGGTaGCCTTCTCCAGGATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DMELTRPCRALCCSAALALEHSG*PSPGCL Trigger: CAGACATCCTGGAGAAGGCAACCCAGAGTGTTCCAA...AGCTAAAGCTGCTGAACAGCACAGAGCTCTGCAAGGTCTCGTCAGCTCCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS TCA 90 bp | AGGAGGGTCTTGTCTGCAGAGGGTGGATCTGTCTTTGGCTCACAATaGCCCAAGTCCTCGTCCAGGTTCTGGCCATTGTTCTTCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRVLSAEGGSVFGSQ*PKSSSRFWPLFFCF Trigger: GAAACAGAAGAACAATGGCCAGAACCTGGACGAGGACTTGGGTCATTGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAGACCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS CCA 90 bp | GTGGAACAAGGCCTCATGTTCGTAAGGGTCGAACTTGGCCCCAATTaGGTCAAGCCTGAGCAAGCCGTGTTTTGTGAACACCTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VEQGLMFVRVELGPN*VKPEQAVFCEHLLN Trigger: ATTCAGAAGGTGTTCACAAAACACGGCTTGCTCAGGCTTGACCCAATTGGGGCCAAGTTCGACCCTTACGAACATGAGGCCTTGTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CAA 90 bp | CTAATGGTGTATTCACTTATGCAATGTGAAGGCACTGCCTCTGCTGTCAGGCTGACCTCCAGCAAGTCCTaGCAGAAACCCTGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMVYSLMQCEGTASAVRLTSSKS*QKPWMP Trigger: TGGCATCCAGGGTTTCTGCAAGGACTTGCTGGAGGT...CAGCCTGACAGCAGAGGCAGTGCCTTCACATTGCATAAGTGAATACACCATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS-3UTR CAA 90 bp | CTCATGTGTGTCGTGGCTTTGGCTGCCTGGCTTTCTCCCATGAGCTGTATTATATCTGCCAAAGCACGTTaGTATTTTTCCATGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMCVVALAAWLSPMSCIISAKAR*YFSMVS Trigger: AGAGACCATGGAAAAATACAAACGTGCTTTGGCAGA...TATAATACAGCTCATGGGAGAAAGCCAGGCAGCCAAAGCCACGACACACATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS GCA 72 bp | TGTGCACAACAAGCGAGGAGAAGGCCTGAACGACAGTaGCAAAGCCGGGAGGCTGCGGCGCGCCAGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CAQQARRRPERQ*QSREAAARQPH Trigger: GTGAGGCTGGCGCGCCGCAGCCTCCCGGCTTTGGCACTGTCGTTCAGGCCTTCTCCTCGCTTGTTGTGCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS CAA 72 bp | CCAGGAGGGTCTTGTCTGCAGAGGGTGGATCTGTCTTaGGCTCACAATGACCCAAGTCCTCGTCCAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGGSCLQRVDLS*AHNDPSPRPGS Trigger: AGAACCTGGACGAGGACTTGGGTCATTGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAGACCCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS CAA 90 bp | CCTTCTCTTCCAGGAGGGTCTTGTCTGCAGAGGGTGGATCTGTCTTaGGCTCACAATGACCCAAGTCCTCGTCCAGGTTCTGGCCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLPGGSCLQRVDLS*AHNDPSPRPGSGHC Trigger: ACAATGGCCAGAACCTGGACGAGGACTTGGGTCATTGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAGACCCTCCTGGAAGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS CCA 72 bp | GGCCTCATGTTCGTAAGGGTCGAACTTGGCCCCAATTaGGTCAAGCCTGAGCAAGCCGTGTTTTGTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLMFVRVELGPN*VKPEQAVFCEH Trigger: GTGTTCACAAAACACGGCTTGCTCAGGCTTGACCCAATTGGGGCCAAGTTCGACCCTTACGAACATGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS GCA 72 bp | TTCCAGCTTTGCCTTCTCTTCCAGGAGGGTCTTGTCTaGAGAGGGTGGATCTGTCTTTGGCTCACAATGACC | + |
|
Preference number: 6 (lower is better) Translates to: FQLCLLFQEGLV*RGWICLWLTMT Trigger: GGTCATTGTGAGCCAAAGACAGATCCACCCTCTGCAGACAAGACCCTCCTGGAAGAGAAGGCAAAGCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
||
| CDS GCA 72 bp | AAAGCACGTTTGTATTTTTCCATGGTCTCTCTCAGCTaGTCTTCCAGCTTTGCCTTCTCTTCCAGGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KARLYFSMVSLS*SSSFAFSSRRV Trigger: GACCCTCCTGGAAGAGAAGGCAAAGCTGGAAGAGCAGCTGAGAGAGACCATGGAAAAATACAAACGTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031099.4 |
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