RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRM4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063239

Ensembl transcript IDs: ENSMUST00000118161.3, ENSMUST00000118489.8, ENSMUST00000231290.2, ENSMUST00000231416.2, ENSMUST00000231809.2, ENSMUST00000232243.2

Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCGGGCAGGACACATaGCAGACGGGTAGGGTGGGCGAGCAGGCTGCAGGCCACAGGGAC +
Preference number: 1 (lower is better)
Translates to: VSLAGRARRTGGQDT*QTGRVGEQAAGHRD
Trigger: GTCCCTGTGGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCCATGTGTCCTGCCCGCCTGTCCGCCTTGCCCTTCCTGCCAACGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR CCA 90 bp GCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTaGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCT +
Preference number: 1 (lower is better)
Translates to: AHEAGRHQQGPREWP*PDAPSSEVVALQPA
Trigger: AGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR GCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATaGACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GRQTSAGPSGMALAG*TILRGCGSSACLAL
Trigger: CAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR GCA 90 bp GAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAGGTGATGGCCAGCTGCGAGGCGGGG +
Preference number: 1 (lower is better)
Translates to: EWEGSTTNHTQMPSN*SEMRTKVMASCEAG
Trigger: CCCCGCCTCGCAGCTGGCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 90 bp GCAGGGCAGGCTGCAGATGGAGCGTGGCAGCTGCTGGCCACTCCCTaGCCACTGCATCCGCTCTATTCTGAGGTGCAAGTGGTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: AGQAADGAWQLLATP*PLHPLYSEVQVVCP
Trigger: TGGACAGACCACTTGCACCTCAGAATAGAGCGGATGCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATaGCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCC +
Preference number: 1 (lower is better)
Translates to: WLGILLSSAPSHIRG*PRGRQTSAGPSGMA
Trigger: GGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR GCA 90 bp ACAACATCCGTCTGGAAGGAAGGCCTGTGTGGCACAACCTGGAGCTaGCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCC +
Preference number: 1 (lower is better)
Translates to: TTSVWKEGLCGTTWS*PSHLASSSCPPWLA
Trigger: GGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAGGTTGTGCCACACAGGCCTTCCTTCCAGACGGATGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR GCA 90 bp AGGCTGCAGATGGAGCGTGGCAGCTGCTGGCCACTCCCTGGCCACTaGATCCGCTCTATTCTGAGGTGCAAGTGGTCTGTCCATGAGCCG +
Preference number: 1 (lower is better)
Translates to: RLQMERGSCWPLPGH*IRSILRCKWSVHEP
Trigger: CGGCTCATGGACAGACCACTTGCACCTCAGAATAGAGCGGATGCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 90 bp TCGGTCAAACCCTCGCACAGACGTCCTCTTGGGAAGAATGGTGACTaGACCTTCAGCCACTTCCTCAAGGCGCAGCACGGGGGCGCTCTT +
Preference number: 1 (lower is better)
Translates to: SVKPSHRRPLGKNGD*TFSHFLKAQHGGAL
Trigger: AAGAGCGCCCCCGTGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGGGTTTGACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTaGATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAAT +
Preference number: 1 (lower is better)
Translates to: VMAGDSTVLSTKPHS*MPTRQADISRALGN
Trigger: ATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 90 bp GCCGAGTCCTGCCCGATGCGCTCTCGGTTGGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCGTGGCGGCTCAACTTGCAATGGAAG +
Preference number: 1 (lower is better)
Translates to: AESCPMRSRLVHFLM*LPFLSAWRLNLQWK
Trigger: CTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCACCAACCGAGAGCGCATCGGGCAGGACTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 90 bp AGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTaGTGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGT +
Preference number: 1 (lower is better)
Translates to: SHLASSSCPPWLAQQ*WLGILLSSAPSHIR
Trigger: ACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR GCA 90 bp GGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTaGTTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: GGRKSQDWALETEPL*FGVGHNIRLEGRPV
Trigger: CACAGGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR TCA 90 bp ACAGTCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTaGACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCGGGC +
Preference number: 1 (lower is better)
Translates to: TVMLHIRDHHQTLRH*TPCRWQEGQGGQAG
Trigger: GCCCGCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR CCA 90 bp GAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTaGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTGTGTGGCA +
Preference number: 1 (lower is better)
Translates to: EKKPGLGSRDRAPVL*SRTQHPSGRKACVA
Trigger: TGCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR TCA 90 bp TGGCCACTGCATCCGCTCTATTCTGAGGTGCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTCAGCCGAGCCGTTGCGACGTTGGTA +
Preference number: 1 (lower is better)
Translates to: WPLHPLYSEVQVVCP*ADDLVLSRAVATLV
Trigger: TACCAACGTCGCAACGGCTCGGCTGAGTACAAGGTCATCGGCTCATGGACAGACCACTTGCACCTCAGAATAGAGCGGATGCAGTGGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 90 bp CTGTTTGGTGGCCAGTGCTGGGGCCTCCAGGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGGCCTGAAGTTGCCCTTCTGTGTGAA +
Preference number: 1 (lower is better)
Translates to: LFGGQCWGLQVLTQL*LGFPIRPEVALLCE
Trigger: TTCACACAGAAGGGCAACTTCAGGCCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 90 bp TCTCGGTTGGTGCACTTCTTGATGTGGCTTCCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGGAAGTTGTCCTCCCAGAACTCAGCA +
Preference number: 1 (lower is better)
Translates to: SRLVHFLMWLPFLSA*RLNLQWKLSSQNSA
Trigger: TGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCACCAACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 90 bp TGTGATGTGAAAGAGTTGGTAGATGAAGCAAAGAGGGGGAGAGGCTaGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTG +
Preference number: 1 (lower is better)
Translates to: CDVKELVDEAKRGRG*KEMRSSGAEEKMTV
Trigger: CACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAGCCTCTCCCCCTCTTTGCTTCATCTACCAACTCTTTCACATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR GCA 90 bp CGGGGGTCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: RGSSVRWSWKSTTEWEGSMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...GGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGACCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp CGGGGGTCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCGGGGCTGATGAACCGTaGGGCGCTGACCGACCGCTT +
Preference number: 2 (lower is better)
Translates to: RGSSVRWSWKSTTEWEGSGADEP*GADRPL
Trigger: AAGCGGTCGGTCAGCGCCCCACGGTTCATCAGCCCC...GGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGACCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp AAGTCCACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 2 (lower is better)
Translates to: KSTTEWEGSTTNHTQMPSAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...GCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCCGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 2 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCRSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR GCA 90 bp GAACCACACGCAGATGCCAAGCAACTGCAGCGAGATGAGGACGAAGGTGATGGCCGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 2 (lower is better)
Translates to: EPHADAKQLQRDEDEGDGRSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...GCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR TCA 90 bp ACACATGGCAGACGGGTAGGGTGGGCGAGCAGGCTGCAGGCCACAGGGACACACGAGGCTGGAAGGAAATaGGGTCCAGTGGTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: THGRRVGWASRLQATGTHEAGRK*GPVVQK
Trigger: CTTCTGCACCACTGGACCTCATTTCCTTCCAGCCTC...GTGTGTCCCTGTGGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCCATGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR TCA 90 bp AAGTCCACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCTGTGGCTTCCCTTCTTaGGCGCGTGGCGGCTCAACT +
Preference number: 2 (lower is better)
Translates to: KSTTEWEGSTTNHTQMPSCGFPS*ARGGST
Trigger: AGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACA...GCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR GCA 90 bp AGCGTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGTCCTCTTGGGAGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: SVRLEKYRSNPRTDVLLGVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...TCCCAAGAGGACGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp CACCTTCCCCTCCTGTTCGTAGGCCGAGTCCTGCCCGATGCGCTCTCGGTTGGTCCCATCCAAAAGAAGTaGCCGGTCTGGTTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: HLPLLFVGRVLPDALSVGPIQKK*PVWLAL
Trigger: CAGGGCCAACCAGACCGGCCACTTCTTTTGGATGGG...ACCAACCGAGAGCGCATCGGGCAGGACTCGGCCTACGAACAGGAGGGGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp TCGTGCGGTTCTCCGTGGGCCGCATGTCATAGGGGCAGGTCTTACAGGTGTAGCGCACGGGGGCGCTCTTaGAGCCCCAGCTATCAGAAC +
Preference number: 2 (lower is better)
Translates to: SCGSPWAACHRGRSYRCSARGRS*SPSYQN
Trigger: GTTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGC...GCTACACCTGTAAGACCTGCCCCTATGACATGCGGCCCACGGAGAACCGCACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp TCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCACCACGCCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: SSVRWSWKSTTEWEGSTTPFLSA*RLNLQW
Trigger: CCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGG...CGTGGTGGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR TCA 90 bp AACACTCAGGCACTGAACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCTGGCTCGCCCAGCAGTaGTGGCTGGGGATTCTACTG +
Preference number: 2 (lower is better)
Translates to: NTQALNSVSLAGRARRTGWLAQQ*WLGILL
Trigger: CAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCA...GCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR TCA 90 bp AGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGTTCCCAGAGATGCTaGGGGGAAGTGGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: RNHPFGHSFCSPLGGPSGSSQRC*GEVAPR
Trigger: TCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACT...GCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR-3UTR TCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCCAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 2 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp TGTTGTTGTCAAGCGTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: CCCQACGWRSIGQTLAQTSGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...CGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCTTGACAACAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CAA 90 bp CATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTaGGCAGGAAGGGCAAGGCGGACAGGCGGGCAGGACACATGGCAG +
Preference number: 2 (lower is better)
Translates to: HQRPSPNTQALNSVS*AGRARRTGGQDTWQ
Trigger: CTGCCATGTGTCCTGCCCGCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR TCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCTGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 2 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCCSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR GCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCCGTGGCGGCTCAACTTaGAATGGAAGTTGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCRGGST*NGSCPP
Trigger: GGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACG...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp AGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGATGCTGAGGGGAAGTaGCCCCCAGAAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RRCRGSLVPAPNLGIIPSDAEGK*PPEGRE
Trigger: CTCCCTGCCTTCTGGGGGCCACTTCCCCTCAGCATC...CGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR-3UTR CCA 90 bp TCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCACCACGGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCG +
Preference number: 2 (lower is better)
Translates to: SSVRWSWKSTTEWEGSTTVHFLM*LPFLSA
Trigger: CGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCAC...CGTGGTGGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGGCAGACGGGTAGGGTaGGCGAGCAGGCTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SCYTSETITKHSGTELRVGRRVG*ASRLQA
Trigger: GGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCC...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR CCA 90 bp TCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGAAGGCAGGGAGACCCTaGCTAAGGAAGCCTAGCCCG +
Preference number: 2 (lower is better)
Translates to: SQLRNHPFGHSFCSPLGGKAGRP*LRKPSP
Trigger: CGGGCTAGGCTTCCTTAGCCAGGGTCTCCCTGCCTT...CCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR-3UTR CCA 90 bp ACTCAGCAAACCAGATGTTGCGCCTGTTGTTGTCAAGCGTGCGGCTGGAGAAGTAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 2 (lower is better)
Translates to: TQQTRCCACCCQACGWRSKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...ACTTCTCCAGCCGCACGCTTGACAACAACAGGCGCAACATCTGGTTTGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CAA 90 bp GTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGTCCTCTaGGGAAGAATGGTGACTGCACCTTCAGCCACTTCCTCAAGGCGC +
Preference number: 2 (lower is better)
Translates to: VRLEKYRSNPRTDVL*GRMVTAPSATSSRR
Trigger: GCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CAA 90 bp CCGATGCGCTCTCGGTTGGTGCACTTCTTGATGTGGCTTCCCTTCTaGAGCGCGTGGCGGCTCAACTTGCAATGGAAGTTGTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PMRSRLVHFLMWLPF*SAWRLNLQWKLSSQ
Trigger: CTGGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCACCAACCGAGAGCGCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR TCA 90 bp GGTCTTACAGGTGTAGCGGTCCACCTGGTACTGGTACCCCGTGCAGGGCTCGCATCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 2 (lower is better)
Translates to: GLTGVAVHLVLVPRAGLASWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...TGCGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCGCTACACCTGTAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR GCA 90 bp TTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAATGGCCCTGGCCGGATaGACCATCCTCAGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: FYCPQHQATFVDAHEAGRMALAG*TILRGC
Trigger: ACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCAT...TCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR GCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGATGGCCCTGGCCGGATaGACCATCCTCAGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTMALAG*TILRGC
Trigger: ACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCAT...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR GCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 2 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp GAACCACACGCAGATGCCAAGCAACTGCAGCGAGATGAGGACGAAGGTGATGGCACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCC +
Preference number: 2 (lower is better)
Translates to: EPHADAKQLQRDEDEGDGTMGMG*QLVRFS
Trigger: GGAGAACCGCACGAGCTGCCAGCCCATACCCATTGT...GCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CAA 90 bp TTGGTGGCCAGTGCTGGGGCCTCCAGGTTCTCACACAGCTCTGACTaGGCTTCCCCATTAGGCCTGAAGTTGCCCTTCTGTGTGAACTTG +
Preference number: 2 (lower is better)
Translates to: LVASAGASRFSHSSD*ASPLGLKLPFCVNL
Trigger: CAAGTTCACACAGAAGGGCAACTTCAGGCCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR GCA 90 bp GACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTGGGTCACCAACAAGACTTAGCCTCCTCCAGTTaGCCACCATGGCTCGCCCAG +
Preference number: 2 (lower is better)
Translates to: DRRETQRQGGDQLGHQQDLASSS*PPWLAQ
Trigger: CTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAA...GTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR TCA 90 bp GCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTTGTGGCTCGCCCAGCAGTaGTGGCTGGGGATTCTACTG +
Preference number: 2 (lower is better)
Translates to: ATHQRPSPNTQALNSVSLWLAQQ*WLGILL
Trigger: CAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCA...CAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR GCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATATGGCCCTGGCCGGATaGACCATCCTCAGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDMALAG*TILRGC
Trigger: ACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCAT...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGAAGGAAGGCCTGTGTaGCACAACCTGGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLEGRPV*HNLELP
Trigger: GGGCAGCTCCAGGTTGTGCCACACAGGCCTTCCTTC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGAAGGGTGGGGACCAACTaGGTCACCAACAAGACAGAC +
Preference number: 2 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRRVGTN*VTNKTD
Trigger: GTCTGTCTTGTTGGTGACCCAGTTGGTCCCCACCCT...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp GAACCACACGCAGATGCCAAGCAACTGCAGCGAGATGAGGACGAAGGTGATGGCTGTCAAGCGTGCGGCTaGAGAAGTATCGGTCAAACC +
Preference number: 2 (lower is better)
Translates to: EPHADAKQLQRDEDEGDGCQACG*RSIGQT
Trigger: GGTTTGACCGATACTTCTCCAGCCGCACGCTTGACA...GCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp GTCGTTGTAGCGCACAAAAGTGACCACCACGAACAGCGTGGCAGCAATGCCCACCGGCTCAACTTGCAATaGAAGTTGTCCTCCCAGAAC +
Preference number: 2 (lower is better)
Translates to: VVVAHKSDHHEQRGSNAHRLNLQ*KLSSQN
Trigger: GTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCG...GTGGGCATTGCTGCCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAACGCAAAGACAGGGTaGGGACCAACTGGGTCACCA +
Preference number: 2 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLNAKTG*GPTGSP
Trigger: TGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTT...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR GCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTATGGCCCTGGCCGGATaGACCATCCTCAGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVMALAG*TILRGC
Trigger: ACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCAT...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTCTGTGTGGCACAACCTaGAGCTGCCCCAGCCACTTA +
Preference number: 2 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVLCGTT*SCPSHL
Trigger: TAAGTGGCTGGGGCAGCTCCAGGTTGTGCCACACAG...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTAACGCAAAGACAGGGTaGGGACCAACTGGGTCACCA +
Preference number: 2 (lower is better)
Translates to: NEVQWCRRENDSGRVGATNAKTG*GPTGSP
Trigger: TGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTT...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGACACAACATCCGTCTaGAAGGAAGGCCTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: REQKEKYRSREPKQTTHADTTSV*KEGLCG
Trigger: GCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTC...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp AGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCGACACAACATCCGTCTaGAAGGAAGGCCTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: SRKKNTGVESPNRQHMQSDTTSV*KEGLCG
Trigger: GCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTC...GCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CCA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGGAAATGAGGTCCAGTaGTGCAGAAGAGAAAATGAC +
Preference number: 2 (lower is better)
Translates to: SCYTSETITKHSGTELRVGNEVQ*CRREND
Trigger: GTCATTTTCTCTTCTGCACCACTGGACCTCATTTCC...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR CCA 72 bp GGACAGGCGGGCAGGACACATGGCAGACGGGTAGGGTaGGCGAGCAGGCTGCAGGCCACAGGGACACACAGG +
Preference number: 3 (lower is better)
Translates to: GQAGRTHGRRVG*ASRLQATGTHR
Trigger: CCTGTGTGTCCCTGTGGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCCATGTGTCCTGCCCGCCTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR CAA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGCACCATCCTCAGAGGTaGTGGCTCTTCAGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: MPTRQADISRALGNGPGRHHPQR*WLFSLL
Trigger: AAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTG...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CAA 90 bp AGCGTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGTCCTCTTGGGAAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: SVRLEKYRSNPRTDVLLGKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...TCCCAAGAGGACGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp CGGGGGTCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCATGTTGCGCCTGTTGTaGTCAAGCGTGCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RGSSVRWSWKSTTEWEGSMLRLL*SSVRLE
Trigger: CTCCAGCCGCACGCTTGACAACAACAGGCGCAACAT...GGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGACCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp AAGTCCACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 3 (lower is better)
Translates to: KSTTEWEGSTTNHTQMPSALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...GCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp CCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTaGGGGGAAGTGGCCCCCAGAAGGCAGGGAGACCCT +
Preference number: 3 (lower is better)
Translates to: PSGRARGSSQRC*GEVAPRRQGDP
Trigger: AGGGTCTCCCTGCCTTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR CCA 72 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTaGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: AGRHQQGPREWP*PDAPSSEVVAL
Trigger: AAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CAA 90 bp CACCTTCCCCTCCTGTTCGTAGGCCGAGTCCTGCCCGATGCGCTCTCGGTTGGTCAGATGTTGCGCCTGTaGTTGTCAAGCGTGCGGCTG +
Preference number: 3 (lower is better)
Translates to: HLPLLFVGRVLPDALSVGQMLRL*LSSVRL
Trigger: CAGCCGCACGCTTGACAACAACAGGCGCAACATCTG...ACCAACCGAGAGCGCATCGGGCAGGACTCGGCCTACGAACAGGAGGGGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp GCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTaGTGGCTGGGGATTCTACTGTCCTCAGCACCAAGC +
Preference number: 3 (lower is better)
Translates to: ASSSCPPWLAQQ*WLGILLSSAPS
Trigger: GCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 72 bp GGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTaGCCCCCAGAAGGCAGGGAGACCCTGGCTAAGGAA +
Preference number: 3 (lower is better)
Translates to: GLEGVPRDAEGK*PPEGRETLAKE
Trigger: TTCCTTAGCCAGGGTCTCCCTGCCTTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR CCA 72 bp GGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTaGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCC +
Preference number: 3 (lower is better)
Translates to: GIIPSDTVSALP*AGHQAGLEGVP
Trigger: GGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR CCA 72 bp TCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAACCACACGCAGATGCCA +
Preference number: 3 (lower is better)
Translates to: SSVRWSWKSTTE*EGSTTNHTQMP
Trigger: TGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 72 bp CCCTCGCACAGACGTCCTCTTGGGAAGAATGGTGACTaGACCTTCAGCCACTTCCTCAAGGCGCAGCACGGG +
Preference number: 3 (lower is better)
Translates to: PSHRRPLGKNGD*TFSHFLKAQHG
Trigger: CCCGTGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 72 bp GGGTCCACCACGAACCACACGCAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAGGTGATGGCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: GSTTNHTQMPSN*SEMRTKVMASC
Trigger: GCAGCTGGCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 72 bp GGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTaGATGCCCACGAGGCAGGCAGACATCAGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: GDSTVLSTKPHS*MPTRQADISRA
Trigger: GGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 72 bp ACATCCGTCTGGAAGGAAGGCCTGTGTGGCACAACCTaGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGC +
Preference number: 3 (lower is better)
Translates to: TSVWKEGLCGTT*SCPSHLASSSC
Trigger: GCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAGGTTGTGCCACACAGGCCTTCCTTCCAGACGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 72 bp GGTGAGTCCCACTCCAACTTGACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCCGTGGGCCGCATGTCA +
Preference number: 3 (lower is better)
Translates to: GESHSNLTMGMG*QLVRFSVGRMS
Trigger: TGACATGCGGCCCACGGAGAACCGCACGAGCTGCCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp AACACTCAGGCACTGAACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCATGACAGTGGTAGGGTaGGGGCAACTCAGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: NTQALNSVSLAGRARRTGMTVVG*GQLREQ
Trigger: CTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCAT...GCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR-3UTR CAA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp GGCCAGTGCTGGGGCCTCCAGGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGGCCTGAAGTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: GQCWGLQVLTQL*LGFPIRPEVAL
Trigger: AAGGGCAACTTCAGGCCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAACCTGGAGGCCCCAGCACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 72 bp ATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATaGCCACGAGGCAGGCAGACATCAGCAGGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: ILLSSAPSHIRG*PRGRQTSAGPS
Trigger: CGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 72 bp TGCCCGATGCGCTCTCGGTTGGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCGTGGCGGCTCAACTTG +
Preference number: 3 (lower is better)
Translates to: CPMRSRLVHFLM*LPFLSAWRLNL
Trigger: CAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCACCAACCGAGAGCGCATCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCCACCATCCTCAGAGGTaGTGGCTCTTCAGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSHHPQR*WLFSLL
Trigger: AAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTG...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CAA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCTCAGCAAACCAGATGTaGCGCCTGTTGTTGTCAAGC +
Preference number: 3 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCSANQM*RLLLSS
Trigger: GCTTGACAACAACAGGCGCAACATCTGGTTTGCTGA...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR GCA 72 bp TCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTaGTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGA +
Preference number: 3 (lower is better)
Translates to: SQLRNHPFGHSF*SPLGGPSGRAR
Trigger: TCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR CCA 72 bp GCGCTCAGACTCACAGAGACCGTCAGTGTGGTTGTCTaGATGTACAGCTTGTCAGCCGACTGCGAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: ALRLTETVSVVV*MYSLSADCEVP
Trigger: TGGCACCTCGCAGTCGGCTGACAAGCTGTACATCCAGACAACCACACTGACGGTCTCTGTGAGTCTGAGCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp TGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCACACCATCCTCAGAGGTaGTGGCTCTTCAGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: WGFYCPQHQATFVDAHEAHHPQR*WLFSLL
Trigger: AAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTG...TGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR-3UTR CAA 90 bp GGTCTTACAGGTGTAGCGGTCCACCTGGTACTGGTACCCCGTGCAGGGCTCGCAAACTTGCAATGGAAGTaGTCCTCCCAGAACTCAGCA +
Preference number: 3 (lower is better)
Translates to: GLTGVAVHLVLVPRAGLANLQWK*SSQNSA
Trigger: TGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTT...TGCGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCGCTACACCTGTAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp CAAACCCTCGCACAGACGTCCTCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTTCCTCAAGGCGCAGCA +
Preference number: 3 (lower is better)
Translates to: QTLAQTSSWEEW*LHLQPLPQGAA
Trigger: TGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp CATCCGCTCTATTCTGAGGTGCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTCAGCCGAGCCGTTGCG +
Preference number: 3 (lower is better)
Translates to: HPLYSEVQVVCP*ADDLVLSRAVA
Trigger: CGCAACGGCTCGGCTGAGTACAAGGTCATCGGCTCATGGACAGACCACTTGCACCTCAGAATAGAGCGGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 72 bp ACCAGATGTTGCGCCTGTTGTTGTCAAGCGTGCGGCTaGAGAAGTATCGGTCAAACCCTCGCACAGACGTCC +
Preference number: 3 (lower is better)
Translates to: TRCCACCCQACG*RSIGQTLAQTS
Trigger: GGACGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCTTGACAACAACAGGCGCAACATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR TCA 72 bp CTACACATCAGAGACCATCACCAAACACTCAGGCACTaGACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGA +
Preference number: 3 (lower is better)
Translates to: LHIRDHHQTLRH*TPCRWQEGQGG
Trigger: TCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
3UTR GCA 72 bp CAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTaGTCCCAACTTAGGAATCATCCCTTCGGACACAGT +
Preference number: 3 (lower is better)
Translates to: QQLQKMQGLPRA*SQLRNHPFGHS
Trigger: ACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
3UTR GCA 72 bp CAGCAAACCAGATGTTGCGCCTGTTGTTGTCAAGCGTaGGGCTGGAGAAGTATCGGTCAAACCCTCGCACAG +
Preference number: 3 (lower is better)
Translates to: QQTRCCACCCQA*GWRSIGQTLAQ
Trigger: CTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCTTGACAACAACAGGCGCAACATCTGGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CCA 72 bp ACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTaGGTCACCAACAAGACAGACGGAGGCAGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: TEEKRKDRVGTN*VTNKTDGGRRR
Trigger: CCTCCTTCTGCCTCCGTCTGTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CCA 72 bp GTGCACTTCTTGATGTGGCTTCCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGGAAGTTGTCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: VHFLMWLPFLSA*RLNLQWKLSSQ
Trigger: CTGGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR-3UTR CAA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCCACCATCCTCAGAGGTaGTGGCTCTTCAGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: SCYTSETITKHSGTELRVHHPQR*WLFSLL
Trigger: AAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTG...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR GCA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGCGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAERSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCGGTACTGGTACCCCGTaGAGGGCTCGCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCGTGTP*RARSAS
Trigger: GCTGGCACTGCGAGCCCTGCACGGGGTACCAGTACC...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TRQADISRALGNGPGRMHLGDDG*APAAAA
Trigger: CGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAG...GTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSSGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAGGGGCTGATGAACCGTaGGGCGCTGACCGACCGCTT +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGGADEP*GADRPL
Trigger: AAGCGGTCGGTCAGCGCCCCACGGTTCATCAGCCCC...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGGGCTGATGAACCGTaGGGCGCTGACCGACCGCTT +
Preference number: 4 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPGADEP*GADRPL
Trigger: AAGCGGTCGGTCAGCGCCCCACGGTTCATCAGCCCC...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCCCGGCCCGAGGCCTTaGCGATCGGAGTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GRQTSAGPSGMALAGCTIPGPRP*RSECRC
Trigger: ACAACGACACTCCGATCGTCAAGGCCTCGGGCCGGG...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCAAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGGCGTGCAGAGCATaGCCCATGGCGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRMACRA*PMAYTA
Trigger: CGCCGTGTACGCCATGGGCCATGCTCTGCACGCCAT...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGGAGCGTGGCAGCTGCTaGCCACTCCCTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQERGSC*PLPGHC
Trigger: GCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTC...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGGAGCGTGGCAGCTGCTaGCCACTCCCTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRERGSC*PLPGHC
Trigger: GCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTC...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGTCGTGCGGTTCTCCGTaGGCCGCATGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPSCGSP*AACHRG
Trigger: GCCCCTATGACATGCGGCCCACGGAGAACCGCACGA...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATTGCGGGCGCCCAACGTaGTGTTGGGCAGTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RQADISRALGNGPGRMHHCGRPT*CWAVGP
Trigger: CGGACCTACTGCCCAACATCACGTTGGGCGCCCGCA...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAGGCGTGGGTATCCCTTaGGCAGGTGTCCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGGVGIP*AGVQNA
Trigger: CGCATTCTGGACACCTGCTCAAGGGATACCCACGCC...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGCAGCACAGCCCAGGGTaGGTCCCACTCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPQHSPG*VPLQLD
Trigger: GTCAAGTTGGAGTGGGACTCACCCTGGGCTGTGCTG...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGGGTACTGGTACCCCGTaGAGGGCTCGCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQGTGTP*RARSAS
Trigger: GCTGGCACTGCGAGCCCTGCACGGGGTACCAGTACC...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGACTGCTCCAGGGCGTaGGTATCCCTTGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRDCSRA*VSLEQV
Trigger: CACCTGCTCAAGGGATACCCACGCCCTGGAGCAGTC...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HSFCSPLGGPSGRARGSSLGDDG*APAAAA
Trigger: CGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAG...GGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCAGCACGGGGGCGCTCTTaGAGCCCCAGCTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPARGRS*SPSYQN
Trigger: GTTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGC...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGCGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVRSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACTCGTGCGGTTCTCCGTaGGCCGCATGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRQADISRALGNGPGRMHSCGSP*AACHRG
Trigger: GCCCCTATGACATGCGGCCCACGGAGAACCGCACGA...GTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRKSTTE*EGSTTN
Trigger: GTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGGTCAAGTGTCCGCTaGTCCTGGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPGSSVR*SWKSTT
Trigger: GGTGGTGGACTTCCAGGACCAGCGGACACTTGACCC...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAAGGAGCCATAAAGGCTaGGGAGTAGGCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGRSHKG*GVGRGA
Trigger: TGCCCCTCTGCCTACTCCTCAGCCTTTATGGCTCCT...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCAGGCGTGGGTATCCCTTaGGCAGGTGTCCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPGVGIP*AGVQNA
Trigger: CGCATTCTGGACACCTGCTCAAGGGATACCCACGCC...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGATGTTGGCCACCATaGTCGAGACGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAEGCWPP*SRRSSP
Trigger: CGGGGAGCTCCGTCTCGATCATGGTGGCCAACATCC...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCCAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGACATCCCCAGGGACACTaGAGCGCTCAGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGHPQGH*SAQTHR
Trigger: TCTGTGAGTCTGAGCGCTTCAGTGTCCCTGGGGATG...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSFCSPLGGPSGRARGSSMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...GGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGCCAGCAGCAAGCCATaGCCTTCACCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRASSKP*PSPSSS
Trigger: GGAAGAAGACGGTGAAGGGCATGGCTTGCTGCTGGC...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCACTGTTTGGTGGCCAGTaGTGGGGCCTCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPLFGGQ*WGLQVL
Trigger: GAGAACCTGGAGGCCCCAGCACTGGCCACCAAACAG...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCCAGGGCAAAGAGCATaGCCTCCAGCCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: GRQTSAGPSGMALAGCTIPGQRA*PPAGGY
Trigger: GTATCCACCGGCTGGAGGCCATGCTCTTTGCCCTGG...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCGACTGCTCCAGGGCGTaGGTATCCCTTGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSDCSRA*VSLEQV
Trigger: CACCTGCTCAAGGGATACCCACGCCCTGGAGCAGTC...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAGGTCTTGGGTTCCCGTaGAATCTTCACCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGGLGFP*NLHRLG
Trigger: GCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACC...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPLSLLQLPTMARPAVMASGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCCCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCPFLSA*RLNLQW
Trigger: CCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGG...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CCA 90 bp GAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAATGGCGTGCAGAGCATaGCCCATGGCGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: ELPQPLSLLQLPTMARPAMACRA*PMAYTA
Trigger: CGCCGTGTACGCCATGGGCCATGCTCTGCACGCCAT...TGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGTCGTGCGGTTCTCCGTaGGCCGCATGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVSCGSP*AACHRG
Trigger: GCCCCTATGACATGCGGCCCACGGAGAACCGCACGA...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCAAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPKSTTE*EGSTTN
Trigger: GTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp ATGGTGGCGGCGGTGACAACGGCTTTGAGGCTGCGCTaGCGCTTGGGCACGTTCTGCTCCGGGTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MVAAVTTALRLR*RLGTFCSGWKR
Trigger: CCTCTTCCACCCGGAGCAGAACGTGCCCAAGCGCAAGCGCAGCCTCAAAGCCGTTGTCACCGCCGCCACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp ACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TRQADISRALGNGPGRMHEFMWG*PLGFPR
Trigger: CCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTC...GTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGGGTCCGGGTCGTTGTTaGTGCGGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVGPGRC*CGPGQR
Trigger: TCTTTGCCCTGGACCGCATCAACAACGACCCGGACC...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGTGTGGCTTCCCTTCTTaGGCGCGTGGCGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQCGFPS*ARGGST
Trigger: AGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACA...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR TCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGCSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGCCCAGGAGGCAGATaGGCGACAGGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQSPGGR*ATGPRC
Trigger: ACATCTCGGACCTGTCGCTCATCTGCCTCCTGGGCT...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAAGCCCAGGAGGCAGATaGGCGACAGGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: ELPQPLSLLQLPTMARPASPGGR*ATGPRC
Trigger: ACATCTCGGACCTGTCGCTCATCTGCCTCCTGGGCT...TGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCATCCCCAGGGACACTaGAGCGCTCAGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: GRQTSAGPSGMALAGCTIHPQGH*SAQTHR
Trigger: TCTGTGAGTCTGAGCGCTTCAGTGTCCCTGGGGATG...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQRSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCACGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSRSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGCGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: WALETEPLCFGVGHNIRLRSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...CAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGCGTGGCGGCTCAACTTaGAATGGAAGTTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPRGGST*NGSCPP
Trigger: GGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACG...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGTCACGATGCATGGCGTaGAGAGCATGGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVSRCMA*RAWPMA
Trigger: CGCCATGGGCCATGCTCTGCACGCCATGCATCGTGA...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCGCCAGCAGCAAGCCATaGCCTTCACCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSASSKP*PSPSSS
Trigger: GGAAGAAGACGGTGAAGGGCATGGCTTGCTGCTGGC...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCCCAGAAGGTACTGGTACCCCGTaGAGGGCTCGCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGLEGVPRDAEGKWPPEGTGTP*RARSAS
Trigger: GCTGGCACTGCGAGCCCTGCACGGGGTACCAGTACC...TTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCACCCCAGGTCAGGCTCTaGGATCATGAGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPPQVRL*DHEEGG
Trigger: ACCACCTTCCTCATGATCGCAGAGCCTGACCTGGGG...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGCGCTTGGGCACGTTCTaGTCCGGGTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRRLGTF*SGWKRM
Trigger: CATCCTCTTCCACCCGGAGCAGAACGTGCCCAAGCG...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCGCTTGGGCACGTTCTaGTCCGGGTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: RQADISRALGNGPGRMHHRLGTF*SGWKRM
Trigger: CATCCTCTTCCACCCGGAGCAGAACGTGCCCAAGCG...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGCCAGGGCAAAGAGCATaGCCTCCAGCCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVPGQRA*PPAGGY
Trigger: GTATCCACCGGCTGGAGGCCATGCTCTTTGCCCTGG...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACGGTCTTGGGTTCCCGTaGAATCTTCACCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: TRQADISRALGNGPGRMHGLGFP*NLHRLG
Trigger: GCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACC...GTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCACCCATCCAAAAGAAGTaGCCGGTCTGGTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPPIQKK*PVWLAL
Trigger: CAGGGCCAACCAGACCGGCCACTTCTTTTGGATGGG...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCAGCCGAGCGTGGCAGCTGCTaGCCACTCCCTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CTILRGCGSSACLALSAAERGSC*PLPGHC
Trigger: GCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTC...GGCTGCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGGGTCAAGTGTCCGCTaGTCCTGGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: ELPQPLSLLQLPTMARPAGSSVR*SWKSTT
Trigger: GGTGGTGGACTTCCAGGACCAGCGGACACTTGACCC...TGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCGTAGGTCTGTTTGGTaGCCAGTGCTGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQADISRALGNGPGRMHHRRSVW*PVLGPP
Trigger: TGGAGGCCCCAGCACTGGCCACCAAACAGACCTACG...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCACGTAGGTCTGTTTGGTaGCCAGTGCTGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LELPQPLSLLQLPTMARPRRSVW*PVLGPP
Trigger: TGGAGGCCCCAGCACTGGCCACCAAACAGACCTACG...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGACAGGCCTCCCAGGGTaGTGTCTCCATCGATACGGA +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRTGLPG*CLHRYG
Trigger: TCCGTATCGATGGAGACATCACCCTGGGAGGCCTGT...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCTGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GRQTSAGPSGMALAGCTICSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: MPTRQADISRALGNGPGRVLTQL*LGFPIR
Trigger: CCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAAC...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGACAAAGGTCAGGGACTaGTCCAGGGCGTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRTKVRD*SRAWVS
Trigger: GGATACCCACGCCCTGGAGCAGTCCCTGACCTTTGT...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATACAAAGGTCAGGGACTaGTCCAGGGCGTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: RQADISRALGNGPGRMHHTKVRD*SRAWVS
Trigger: GGATACCCACGCCCTGGAGCAGTCCCTGACCTTTGT...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCCAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCQMPSN*SEMRTK
Trigger: CTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTG...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGACAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGQMPSN*SEMRTK
Trigger: CTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTG...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTGACTGCTCCAGGGCGTaGGTATCCCTTGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GHSFCSPLGGPSGRARGSDCSRA*VSLEQV
Trigger: CACCTGCTCAAGGGATACCCACGCCCTGGAGCAGTC...ACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: STVLSTKPHSWMPTRQADLGDDG*APAAAA
Trigger: CGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAG...GTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADILGDDG*APAAAA
Trigger: CGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAG...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTTCTCTCGGGACTTCTaGATAAAGGCCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSFSRDF*IKASTP
Trigger: CGGCGTGGAGGCCTTTATCCAGAAGTCCCGAGAGAA...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: STVLSTKPHSWMPTRQADSGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...GTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGGCTCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCAAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MARPAVMAGDSTVLSTKPSGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...TGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCGCAGAGCATGGCCCATaGCGTACACGGCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: HSFCSPLGGPSGRARGSSAEHGP*RTRRRS
Trigger: TGATCGACGCCGTGTACGCCATGGGCCATGCTCTGC...GGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGATGGCGTGCAGAGCATaGCCCATGGCGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWMACRA*PMAYTA
Trigger: CGCCGTGTACGCCATGGGCCATGCTCTGCACGCCAT...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCAGAGCGTGGCAGCTGCTaGCCACTCCCTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSERGSC*PLPGHC
Trigger: GCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTC...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AACACTCAGGCACTGAACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: NTQALNSVSLAGRARRTGAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...GCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR CCA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCATTTGGTGGCCAGTGCTaGGGCCTCCAGGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: LELPQPLSLLQLPTMARPFGGQC*GLQVLT
Trigger: TGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAAA...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GCCACTTCCTCAAGGCGCAGCACGGGGGCGCTCTTGGAGCCCCAGCTATCAGAAAGGAGCCATAAAGGCTaGGGAGTAGGCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ATSSRRSTGALLEPQLSERSHKG*GVGRGA
Trigger: TGCCCCTCTGCCTACTCCTCAGCCTTTATGGCTCCT...TTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGCTGCGCCTTGAGGAAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp GACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTGGTCCGGGTCGTTGTTaGTGCGGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DTVSALPWAGHQAGLEGVGPGRC*CGPGQR
Trigger: TCTTTGCCCTGGACCGCATCAACAACGACCCGGACC...AACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGGGTCCGGGTCGTTGTTaGTGCGGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWGPGRC*CGPGQR
Trigger: TCTTTGCCCTGGACCGCATCAACAACGACCCGGACC...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGTGCGGGCGCCCAACGTaGTGTTGGGCAGTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: WALETEPLCFGVGHNIRLCGRPT*CWAVGP
Trigger: CGGACCTACTGCCCAACATCACGTTGGGCGCCCGCA...CAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GHQAGLEGVPRDAEGKWPCRPSR*APAQRS
Trigger: TGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCA...GGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: GRQTSAGPSGMALAGCTIQVVCP*ADDLVL
Trigger: GAGTACAAGGTCATCGGCTCATGGACAGACCACTTG...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCAGCACAGCCCAGGGTaGGTCCCACTCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: IIPSDTVSALPWAGHQAGQHSPG*VPLQLD
Trigger: GTCAAGTTGGAGTGGGACTCACCCTGGGCTGTGCTG...CCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp ACACATGGCAGACGGGTAGGGTGGGCGAGCAGGCTGCAGGCCACAGGGACACACGCACGCCTCGAGTCTTaGTGGCATACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: THGRRVGWASRLQATGTHARLES*WHTQYT
Trigger: CGTGTACTGTGTATGCCATCAAGACTCGAGGCGTGC...GTGTGTCCCTGTGGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCCATGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR TCA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCACGCCTCGAGTCTTaGTGGCATACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: LELPQPLSLLQLPTMARPARLES*WHTQYT
Trigger: CGTGTACTGTGTATGCCATCAAGACTCGAGGCGTGC...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCACAAAGGTCAGGGACTaGTCCAGGGCGTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: HSFCSPLGGPSGRARGSSTKVRD*SRAWVS
Trigger: GGATACCCACGCCCTGGAGCAGTCCCTGACCTTTGT...GGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGCGTGGCGGCTCAACTTaGAATGGAAGTTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQRGGST*NGSCPP
Trigger: GGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACG...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGCGTGGCGGCTCAACTTaGAATGGAAGTTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAERGGST*NGSCPP
Trigger: GGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACG...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGGCGTCGATCACAAACTaGACCTTCCCCTCCTGTTCG +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRASITN*TFPSCS
Trigger: CGAACAGGAGGGGAAGGTGCAGTTTGTGATCGACGC...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAAATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTCCCCAGGTCAGGCTCTaGGATCATGAGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GHSFCSPLGGPSGRARGSPQVRL*DHEEGG
Trigger: ACCACCTTCCTCATGATCGCAGAGCCTGACCTGGGG...ACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTCTGTTTGGTGGCCAGTaGTGGGGCCTCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QPLSLLQLPTMARPAVMALFGGQ*WGLQVL
Trigger: GAGAACCTGGAGGCCCCAGCACTGGCCACCAAACAG...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGILLSSAPSHIRGCPRGKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...GCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTGTCAAGCGTGCGGCTaGAGAAGTATCGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSCQACG*RSIGQT
Trigger: GGTTTGACCGATACTTCTCCAGCCGCACGCTTGACA...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CCA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGGCAGAGCATGGCCCATaGCGTACACGGCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWAEHGP*RTRRRS
Trigger: TGATCGACGCCGTGTACGCCATGGGCCATGCTCTGC...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCAATGTACTTAAGCAGCTaGGTGCCATCCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: HEAGRHQQGPREWPWPDAMYLSS*VPSTGS
Trigger: GGACCCTGTGGATGGCACCCAGCTGCTTAAGTACAT...TGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: QGLPRACSQLRNHPFGHSAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...ACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGAGGGCAGGCTGCAGATaGAGCGTGGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WALETEPLCFGVGHNIRLRAGCR*SVAAAG
Trigger: GCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCT...CAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTCGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QGLPRACSQLRNHPFGHSRSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...ACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCACGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSRSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCTCGTGCGGTTCTCCGTaGGCCGCATGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSSCGSP*AACHRG
Trigger: GCCCCTATGACATGCGGCCCACGGAGAACCGCACGA...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp AGGAGGCAGATGAGCGACAGGTCCGAGATGTCACACTaGAGCACACCCCGGGCGAAGCGGGGGTCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RRQMSDRSEMSH*STPRAKRGSSV
Trigger: GACACTTGACCCCCGCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGACCTGTCGCTCATCTGCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATACAGGCCTCCCAGGGTaGTGTCTCCATCGATACGGA +
Preference number: 4 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDTGLPG*CLHRYG
Trigger: TCCGTATCGATGGAGACATCACCCTGGGAGGCCTGT...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTACAGGCCTCCCAGGGTaGTGTCTCCATCGATACGGA +
Preference number: 4 (lower is better)
Translates to: QPLSLLQLPTMARPAVMATGLPG*CLHRYG
Trigger: TCCGTATCGATGGAGACATCACCCTGGGAGGCCTGT...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWCRPSR*APAQRS
Trigger: TGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCA...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGGCTCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCAGGATGTTGGCCACCATaGTCGAGACGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: MARPAVMAGDSTVLSTKPGCWPP*SRRSSP
Trigger: CGGGGAGCTCCGTCTCGATCATGGTGGCCAACATCC...TGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCGCCGTAGCTACCCTCTaGGGCCAGCGTGGACACATA +
Preference number: 4 (lower is better)
Translates to: RMHHPQRLWLFSLLGSVRAVATL*GQRGHI
Trigger: TATGTGTCCACGCTGGCCTCAGAGGGTAGCTACGGC...GCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACACATGGCAGACGGGTAGGGTGGGCGAGCAGGCTGCAGGCCACAGGGACACACCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: THGRRVGWASRLQATGTHQVVCP*ADDLVL
Trigger: GAGTACAAGGTCATCGGCTCATGGACAGACCACTTG...GTGTGTCCCTGTGGCCTGCAGCCTGCTCGCCCACCCTACCCGTCTGCCATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR TCA 90 bp CAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTCCGAGATGTCACACTTaGGCACACCCCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: QGLPRACSQLRNHPFGHSPRCHT*AHPGRS
Trigger: GCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGG...ACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGCCGGGTGGAAGAGGATaGTGTAGACTTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: DISRALGNGPGRMHHPQRPGGRG*CRLWAC
Trigger: ACATGCCCAAAGTCTACATCATCCTCTTCCACCCGG...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACATGGTTGGTGTAAGTaGCGTAGGTCTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HEAGRHQQGPREWPWPDAHGWCK*RRSVWW
Trigger: CCACCAAACAGACCTACGTCACTTACACCAACCATG...TGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp ACCACCGAGTGGGAGGGGTCCACCACGAACCACACGCAGATGCCAAGCAACTGCACAAAGGTCAGGGACTaGTCCAGGGCGTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: TTEWEGSTTNHTQMPSNCTKVRD*SRAWVS
Trigger: GGATACCCACGCCCTGGAGCAGTCCCTGACCTTTGT...GCAGTTGCTTGGCATCTGCGTGTGGTTCGTGGTGGACCCCTCCCACTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR GCA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATACAGCGTGGCAGCAATaGCCACCACAGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDTAWQQ*PPQPGR
Trigger: TCTTCCTGGCTGTGGTGGGCATTGCTGCCACGCTGT...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTACAGCGTGGCAGCAATaGCCACCACAGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPLSLLQLPTMARPAVMATAWQQ*PPQPGR
Trigger: TCTTCCTGGCTGTGGTGGGCATTGCTGCCACGCTGT...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CACCTTCCCCTCCTGTTCGTAGGCCGAGTCCTGCCCGATGCGCTCTCGGTTGGTTCACCGACTGGGCAATaGACACGCCTCCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: HLPLLFVGRVLPDALSVGSPTGQ*TRLLEE
Trigger: CTCTTCAAGGAGGCGTGTGCATTGCCCAGTCGGTGA...ACCAACCGAGAGCGCATCGGGCAGGACTCGGCCTACGAACAGGAGGGGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CCA 90 bp TCGTGCGGTTCTCCGTGGGCCGCATGTCATAGGGGCAGGTCTTACAGGTGTAGCCCAGGGCAAAGAGCATaGCCTCCAGCCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: SCGSPWAACHRGRSYRCSPGQRA*PPAGGY
Trigger: GTATCCACCGGCTGGAGGCCATGCTCTTTGCCCTGG...GCTACACCTGTAAGACCTGCCCCTATGACATGCGGCCCACGGAGAACCGCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CCA 90 bp TGTTGTTGTCAAGCGTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: CCCQACGWRSIGQTLAQTLGDDG*APAAAA
Trigger: CGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAG...CGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCTTGACAACAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCAACCATGGCCTGGGCCTaGTATGTGTCCGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSTMAWA*YVSEGT
Trigger: CGTGCCCTCGGACACATACCAGGCCCAGGCCATGGT...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGGGAATCTTCACCGACTaGGCAATGCACACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: IIPSDTVSALPWAGHQAGGIFTD*AMHTPP
Trigger: CGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCC...CCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCGCAGAGCATGGCCCATaGCGTACACGGCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSAEHGP*RTRRRS
Trigger: TGATCGACGCCGTGTACGCCATGGGCCATGCTCTGC...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGGCTCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCAATGGCGTGCAGAGCATaGCCCATGGCGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: MARPAVMAGDSTVLSTKPMACRA*PMAYTA
Trigger: CGCCGTGTACGCCATGGGCCATGCTCTGCACGCCAT...TGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGATGTACTTAAGCAGCTaGGTGCCATCCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ADISRALGNGPGRMHHPQMYLSS*VPSTGS
Trigger: GGACCCTGTGGATGGCACCCAGCTGCTTAAGTACAT...CTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAATGTACTTAAGCAGCTaGGTGCCATCCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ELPQPLSLLQLPTMARPAMYLSS*VPSTGS
Trigger: GGACCCTGTGGATGGCACCCAGCTGCTTAAGTACAT...TGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCGAGCGTGGCAGCTGCTaGCCACTCCCTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPERGSC*PLPGHC
Trigger: GCAGTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTC...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGAGGGCAGGCTGCAGATaGAGCGTGGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGIIPSDTVSALPWAGHQRAGCR*SVAAAG
Trigger: GCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCT...CTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCAGGGCAGGCTGCAGATaGAGCGTGGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPRAGCR*SVAAAG
Trigger: GCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCT...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCAGGGCAGGCTGCAGATaGAGCGTGGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSSDGWGFYCPQHQATFRAGCR*SVAAAG
Trigger: GCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCT...GAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCACGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQARSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDTMGMG*QLVRFS
Trigger: GGAGAACCGCACGAGCTGCCAGCCCATACCCATTGT...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCCCAGAAACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QAGLEGVPRDAEGKWPPETMGMG*QLVRFS
Trigger: GGAGAACCGCACGAGCTGCCAGCCCATACCCATTGT...TTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp CGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCCGTAGGTCTGTTTGGTaGCCAGTGCTGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RMHHPQRLWLFSLLGSVRRRSVW*PVLGPP
Trigger: TGGAGGCCCCAGCACTGGCCACCAAACAGACCTACG...GCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCATGCGGGCGCCCAACGTaGTGTTGGGCAGTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GKFPTTAEDAGAPSCLLPCGRPT*CWAVGP
Trigger: CGGACCTACTGCCCAACATCACGTTGGGCGCCCGCA...TGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCGGCGTGGGTATCCCTTaGGCAGGTGTCCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: DRAPVLWSRTQHPSGRKAGVGIP*AGVQNA
Trigger: CGCATTCTGGACACCTGCTCAAGGGATACCCACGCC...GGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATGGCGGGATGTTGGCCACCATaGTCGAGACGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RENDSGRVGATQGAGQMAGCWPP*SRRSSP
Trigger: CGGGGAGCTCCGTCTCGATCATGGTGGCCAACATCC...CGCCATCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCTGTGGCTTCCCTTCTTaGGCGCGTGGCGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADICGFPS*ARGGST
Trigger: AGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACA...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR TCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCCCCGGCCCGAGGCCTTaGCGATCGGAGTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPPGPRP*RSECRC
Trigger: ACAACGACACTCCGATCGTCAAGGCCTCGGGCCGGG...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGACCCGGCCCGAGGCCTTaGCGATCGGAGTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRPGPRP*RSECRC
Trigger: ACAACGACACTCCGATCGTCAAGGCCTCGGGCCGGG...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAAGATGCGGCGGAGTaGACAGGTCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAEDAAE*TGPQVR
Trigger: CCTGACCTGGGGACCTGTTCACTCCGCCGCATCTTC...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACCGAGATGTCACACTTaGGCACACCCCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FYCPQHQATFVDAHEAGRPRCHT*AHPGRS
Trigger: GCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGG...TCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGGCACGCCTCGAGTCTTaGTGGCATACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: IIPSDTVSALPWAGHQAGARLES*WHTQYT
Trigger: CGTGTACTGTGTATGCCATCAAGACTCGAGGCGTGC...CCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGTGTTGTTGTCAAGCGTaGGGCTGGAGAAGTATCGGT +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVCCCQA*GWRSIG
Trigger: ACCGATACTTCTCCAGCCGCACGCTTGACAACAACA...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGCAGCAAACCAGATGTTaGGCCTGTTGTTGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVQQTRC*ACCCQA
Trigger: CGCTTGACAACAACAGGCGCAACATCTGGTTTGCTG...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp CAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCCCAGAAGCGTCGATCACAAACTaGACCTTCCCCTCCTGTTCG +
Preference number: 4 (lower is better)
Translates to: QAGLEGVPRDAEGKWPPEASITN*TFPSCS
Trigger: CGAACAGGAGGGGAAGGTGCAGTTTGTGATCGACGC...TTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp CAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTCACGATGCATGGCGTaGAGAGCATGGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: QGLPRACSQLRNHPFGHSSRCMA*RAWPMA
Trigger: CGCCATGGGCCATGCTCTGCACGCCATGCATCGTGA...ACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: RQADISRALGNGPGRMHHRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AACACTCAGGCACTGAACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCGCCAGCAGCAAGCCATaGCCTTCACCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NTQALNSVSLAGRARRTGASSKP*PSPSSS
Trigger: GGAAGAAGACGGTGAAGGGCATGGCTTGCTGCTGGC...GCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR GCA 90 bp CGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCACAGCGTGGCAGCAATaGCCACCACAGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RMHHPQRLWLFSLLGSVRTAWQQ*PPQPGR
Trigger: TCTTCCTGGCTGTGGTGGGCATTGCTGCCACGCTGT...GCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCCCCCAGGTCAGGCTCTaGGATCATGAGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RMHHPQRLWLFSLLGSVRPQVRL*DHEEGG
Trigger: ACCACCTTCCTCATGATCGCAGAGCCTGACCTGGGG...GCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATTTCTCTCGGGACTTCTaGATAAAGGCCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDFSRDF*IKASTP
Trigger: CGGCGTGGAGGCCTTTATCCAGAAGTCCCGAGAGAA...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCGGAATCTTCACCGACTaGGCAATGCACACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RMHHPQRLWLFSLLGSVRGIFTD*AMHTPP
Trigger: CGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCC...GCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGAAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGGCACGGGGGCGCTCTTaGAGCCCCAGCTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTARGRS*SPSYQN
Trigger: GTTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGC...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGATGGCGTGCAGAGCATaGCCCATGGCGTACACGGCG +
Preference number: 4 (lower is better)
Translates to: SQLRNHPFGHSFCSPLGGMACRA*PMAYTA
Trigger: CGCCGTGTACGCCATGGGCCATGCTCTGCACGCCAT...CCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAAAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQKSTTE*EGSTTN
Trigger: GTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGTGTCCGCTGGTCCTaGAAGTCCACCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LGILLSSAPSHIRGCPRGSVRWS*KSTTEW
Trigger: CCACTCGGTGGTGGACTTCCAGGACCAGCGGACACT...GCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCGGGTCAAGTGTCCGCTaGTCCTGGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADIGSSVR*SWKSTT
Trigger: GGTGGTGGACTTCCAGGACCAGCGGACACTTGACCC...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAAAGGAGCCATAAAGGCTaGGGAGTAGGCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQRSHKG*GVGRGA
Trigger: TGCCCCTCTGCCTACTCCTCAGCCTTTATGGCTCCT...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACTCAGCAAACCAGATGTTGCGCCTGTTGTTGTCAAGCGTGCGGCTGGAGAAGTTGCGGGCGCCCAACGTaGTGTTGGGCAGTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TQQTRCCACCCQACGWRSCGRPT*CWAVGP
Trigger: CGGACCTACTGCCCAACATCACGTTGGGCGCCCGCA...ACTTCTCCAGCCGCACGCTTGACAACAACAGGCGCAACATCTGGTTTGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGCCGTAGCTACCCTCTaGGGCCAGCGTGGACACATA +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAAVATL*GQRGHI
Trigger: TATGTGTCCACGCTGGCCTCAGAGGGTAGCTACGGC...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCGCCGTAGCTACCCTCTaGGGCCAGCGTGGACACATA +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPAVATL*GQRGHI
Trigger: TATGTGTCCACGCTGGCCTCAGAGGGTAGCTACGGC...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: DTVSALPWAGHQAGLEGVQVVCP*ADDLVL
Trigger: GAGTACAAGGTCATCGGCTCATGGACAGACCACTTG...AACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp AGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATGGCGCAGCACAGCCCAGGGTaGGTCCCACTCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: RENDSGRVGATQGAGQMAQHSPG*VPLQLD
Trigger: GTCAAGTTGGAGTGGGACTCACCCTGGGCTGTGCTG...CGCCATCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGCAGCACAGCCCAGGGTaGGTCCCACTCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTQHSPG*VPLQLD
Trigger: GTCAAGTTGGAGTGGGACTCACCCTGGGCTGTGCTG...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGAAGATGCGGCGGAGTaGACAGGTCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGEDAAE*TGPQVR
Trigger: CCTGACCTGGGGACCTGTTCACTCCGCCGCATCTTC...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp AGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCCGAGATGTCACACTTaGGCACACCCCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SDGWGFYCPQHQATFVDAPRCHT*AHPGRS
Trigger: GCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGG...GGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGAGCCCAGGAGGCAGATaGGCGACAGGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RRCRGSLVPAPNLGIIPSSPGGR*ATGPRC
Trigger: ACATCTCGGACCTGTCGCTCATCTGCCTCCTGGGCT...CGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCGCACGCCTCGAGTCTTaGTGGCATACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSARLES*WHTQYT
Trigger: CGTGTACTGTGTATGCCATCAAGACTCGAGGCGTGC...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCCCAGGGACACTaGAGCGCTCAGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQHPQGH*SAQTHR
Trigger: TCTGTGAGTCTGAGCGCTTCAGTGTCCCTGGGGATG...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATCCGGGTGGAAGAGGATaGTGTAGACTTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDPGGRG*CRLWAC
Trigger: ACATGCCCAAAGTCTACATCATCCTCTTCCACCCGG...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTCCAGCAATGGCGGGCTaGATTCCACGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NFQQLQKMQGLPRACSQLPAMAG*IPRAGP
Trigger: AGGCCCTGCCCGTGGAATTCAGCCCGCCATTGCTGG...AAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp AATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: NFQQLQKMQGLPRACSQLVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...AAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp TGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCATCACGATGCATGGCGTaGAGAGCATGGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: WGFYCPQHQATFVDAHEASRCMA*RAWPMA
Trigger: CGCCATGGGCCATGCTCTGCACGCCATGCATCGTGA...TGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATATGGAGCGTGGCAGCTaGTGGCCACTCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDMERGS*WPLPGH
Trigger: GTGGCCAGGGAGTGGCCAGCAGCTGCCACGCTCCAT...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGTACTGGTACCCCGTaGAGGGCTCGCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QWCRRENDSGRVGATQGAGTGTP*RARSAS
Trigger: GCTGGCACTGCGAGCCCTGCACGGGGTACCAGTACC...TGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCCCCCAGGTCAGGCTCTaGGATCATGAGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADIPQVRL*DHEEGG
Trigger: ACCACCTTCCTCATGATCGCAGAGCCTGACCTGGGG...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCACCCCAGGTCAGGCTCTaGGATCATGAGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSPQVRL*DHEEGG
Trigger: ACCACCTTCCTCATGATCGCAGAGCCTGACCTGGGG...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCGCTTGGGCACGTTCTaGTCCGGGTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHRLGTF*SGWKRM
Trigger: CATCCTCTTCCACCCGGAGCAGAACGTGCCCAAGCG...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCACTGTTTGGTGGCCAGTaGTGGGGCCTCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQALFGGQ*WGLQVL
Trigger: GAGAACCTGGAGGCCCCAGCACTGGCCACCAAACAG...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GTCGTTGTAGCGCACAAAAGTGACCACCACGAACAGCGTGGCAGCAATGCCCACGACTGCTCCAGGGCGTaGGTATCCCTTGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VVVAHKSDHHEQRGSNAHDCSRA*VSLEQV
Trigger: CACCTGCTCAAGGGATACCCACGCCCTGGAGCAGTC...GTGGGCATTGCTGCCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CCA 90 bp AACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCACCATGGCCTGGGCCTaGTATGTGTCCGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: NNCRRCRGSLVPAPNLGITMAWA*YVSEGT
Trigger: CGTGCCCTCGGACACATACCAGGCCCAGGCCATGGT...GATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAAGGAATCTTCACCGACTaGGCAATGCACACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQGIFTD*AMHTPP
Trigger: CGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCC...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACGGTCTTGGGTTCCCGTaGAATCTTCACCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: STVLSTKPHSWMPTRQADGLGFP*NLHRLG
Trigger: GCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACC...GTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQPFLSA*RLNLQW
Trigger: CCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGG...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CCA 90 bp CAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCCCAGAAATGTACTTAAGCAGCTaGGTGCCATCCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QAGLEGVPRDAEGKWPPEMYLSS*VPSTGS
Trigger: GGACCCTGTGGATGGCACCCAGCTGCTTAAGTACAT...TTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTGGGTCACCAACAAGACCGGTCCACCTGGTACTaGTACCCCGTGCAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: DRRETQRQGGDQLGHQQDRSTWY*YPVQGS
Trigger: CGAGCCCTGCACGGGGTACCAGTACCAGGTGGACCG...GTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCTCGTGCGGTTCTCCGTaGGCCGCATGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: NNCRRCRGSLVPAPNLGISCGSP*AACHRG
Trigger: GCCCCTATGACATGCGGCCCACGGAGAACCGCACGA...GATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTGGGGCTGATGAACCGTaGGGCGCTGACCGACCGCTT +
Preference number: 4 (lower is better)
Translates to: NFQQLQKMQGLPRACSQLGADEP*GADRPL
Trigger: AAGCGGTCGGTCAGCGCCCCACGGTTCATCAGCCCC...AAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATAGTGTCCGCTGGTCCTaGAAGTCCACCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHSVRWS*KSTTEW
Trigger: CCACTCGGTGGTGGACTTCCAGGACCAGCGGACACT...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCAGTGTCCGCTGGTCCTaGAAGTCCACCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPSSDGWGFYCPQHQATFSVRWS*KSTTEW
Trigger: CCACTCGGTGGTGGACTTCCAGGACCAGCGGACACT...GAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTTTGGTGGCCAGTGCTaGGGCCTCCAGGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: DRAPVLWSRTQHPSGRKAFGGQC*GLQVLT
Trigger: TGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAAA...GGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAEFMWG*PLGFPR
Trigger: CCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTC...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GAACCACACGCAGATGCCAAGCAACTGCAGCGAGATGAGGACGAAGGTGATGGCGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: EPHADAKQLQRDEDEGDGEFMWG*PLGFPR
Trigger: CCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTC...GCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp GAACCACACGCAGATGCCAAGCAACTGCAGCGAGATGAGGACGAAGGTGATGGCACAGGCCTCCCAGGGTaGTGTCTCCATCGATACGGA +
Preference number: 4 (lower is better)
Translates to: EPHADAKQLQRDEDEGDGTGLPG*CLHRYG
Trigger: TCCGTATCGATGGAGACATCACCCTGGGAGGCCTGT...GCCATCACCTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTGCGTGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGCGTGGGTATCCCTTaGGCAGGTGTCCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGGVGIP*AGVQNA
Trigger: CGCATTCTGGACACCTGCTCAAGGGATACCCACGCC...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TGTTGTTGTCAAGCGTGCGGCTGGAGAAGTATCGGTCAAACCCTCGCACAGACGGGCGTGGGTATCCCTTaGGCAGGTGTCCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: CCCQACGWRSIGQTLAQTGVGIP*AGVQNA
Trigger: CGCATTCTGGACACCTGCTCAAGGGATACCCACGCC...CGTCTGTGCGAGGGTTTGACCGATACTTCTCCAGCCGCACGCTTGACAACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp TTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTGTGTGGCACAACCTGGGATGTTGGCCACCATaGTCGAGACGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FGVGHNIRLEGRPVWHNLGCWPP*SRRSSP
Trigger: CGGGGAGCTCCGTCTCGATCATGGTGGCCAACATCC...CAGGTTGTGCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACAGACGTCCTCTTGGGAAGAATGGTGACTGCACCTTCAGCCACTTCCTCAAGGGGATGTTGGCCACCATaGTCGAGACGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TDVLLGRMVTAPSATSSRGCWPP*SRRSSP
Trigger: CGGGGAGCTCCGTCTCGATCATGGTGGCCAACATCC...CCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp AACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCTGTGGCTTCCCTTCTTaGGCGCGTGGCGGCTCAACT +
Preference number: 4 (lower is better)
Translates to: NNCRRCRGSLVPAPNLGICGFPS*ARGGST
Trigger: AGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACA...GATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGCAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGAAGATGCGGCGGAGTaGACAGGTCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QWCRRENDSGRVGATQGAEDAAE*TGPQVR
Trigger: CCTGACCTGGGGACCTGTTCACTCCGCCGCATCTTC...TGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTCATGGTTGGTGTAAGTaGCGTAGGTCTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPLSLLQLPTMARPAVMAHGWCK*RRSVWW
Trigger: CCACCAAACAGACCTACGTCACTTACACCAACCATG...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCATGGTTGGTGTAAGTaGCGTAGGTCTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWHGWCK*RRSVWW
Trigger: CCACCAAACAGACCTACGTCACTTACACCAACCATG...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAACAAAGGTCAGGGACTaGTCCAGGGCGTGGGTATCC +
Preference number: 4 (lower is better)
Translates to: WGFYCPQHQATFVDAHEATKVRD*SRAWVS
Trigger: GGATACCCACGCCCTGGAGCAGTCCCTGACCTTTGT...TGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGTTGGCCCTGCGCGCTaGCTCCAGCACCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLVGPAR*LQHPPD
Trigger: ATCAGGAGGGTGCTGGAGGCAGCGCGCAGGGCCAAC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCCAGCAGCAAGCCATaGCCTTCACCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGIIPSDTVSALPWAGHQASSKP*PSPSSS
Trigger: GGAAGAAGACGGTGAAGGGCATGGCTTGCTGCTGGC...CTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCGCCAGCAGCAAGCCATaGCCTTCACCGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPASSKP*PSPSSS
Trigger: GGAAGAAGACGGTGAAGGGCATGGCTTGCTGCTGGC...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGAACAGCGTGGCAGCAATaGCCACCACAGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KMQGLPRACSQLRNHPFGTAWQQ*PPQPGR
Trigger: TCTTCCTGGCTGTGGTGGGCATTGCTGCCACGCTGT...TCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGACTGTTTGGTGGCCAGTaGTGGGGCCTCCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRLFGGQ*WGLQVL
Trigger: GAGAACCTGGAGGCCCCAGCACTGGCCACCAAACAG...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCCCAGGGCAAAGAGCATaGCCTCCAGCCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPPGQRA*PPAGGY
Trigger: GTATCCACCGGCTGGAGGCCATGCTCTTTGCCCTGG...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTGGGTCACCAACAAGACACCATGGCCTGGGCCTaGTATGTGTCCGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: DRRETQRQGGDQLGHQQDTMAWA*YVSEGT
Trigger: CGTGCCCTCGGACACATACCAGGCCCAGGCCATGGT...GTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATGGCGGGTCTTGGGTTCCCGTaGAATCTTCACCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RENDSGRVGATQGAGQMAGLGFP*NLHRLG
Trigger: GCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACC...CGCCATCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCCCCATCCAAAAGAAGTaGCCGGTCTGGTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSSDGWGFYCPQHQATFPIQKK*PVWLAL
Trigger: CAGGGCCAACCAGACCGGCCACTTCTTTTGGATGGG...GAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCCCAGAACGGCTCAACTTGCAATaGAAGTTGTCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QAGLEGVPRDAEGKWPPERLNLQ*KLSSQN
Trigger: GTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCG...TTCTGGGGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGCCCTTCTTGAGCGCGTaGCGGCTCAACTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RRCRGSLVPAPNLGIIPSPFLSA*RLNLQW
Trigger: CCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGG...CGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGCTGCAGATGGAGCGTaGCAGCTGCTGGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLAADGA*QLLATP
Trigger: GGGAGTGGCCAGCAGCTGCCACGCTCCATCTGCAGC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTTMGMG*QLVRFS
Trigger: GGAGAACCGCACGAGCTGCCAGCCCATACCCATTGT...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAACAATGGGTATGGGCTaGCAGCTCGTGCGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WGFYCPQHQATFVDAHEATMGMG*QLVRFS
Trigger: GGAGAACCGCACGAGCTGCCAGCCCATACCCATTGT...TGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGGGGCTGATGAACCGTaGGGCGCTGACCGACCGCTT +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLGADEP*GADRPL
Trigger: AAGCGGTCGGTCAGCGCCCCACGGTTCATCAGCCCC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: SDGWGFYCPQHQATFVDAKSTTE*EGSTTN
Trigger: GTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT...GGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAAAGTCCACCACCGAGTaGGAGGGGTCCACCACGAAC +
Preference number: 4 (lower is better)
Translates to: GKFPTTAEDAGAPSCLLPKSTTE*EGSTTN
Trigger: GTTCGTGGTGGACCCCTCCCACTCGGTGGTGGACTT...TGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAGTGTCCGCTGGTCCTaGAAGTCCACCACCGAGTGG +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPSVRWS*KSTTEW
Trigger: CCACTCGGTGGTGGACTTCCAGGACCAGCGGACACT...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGTCAAGTGTCCGCTaGTCCTGGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGGSSVR*SWKSTT
Trigger: GGTGGTGGACTTCCAGGACCAGCGGACACTTGACCC...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCATTTGGTGGCCAGTGCTaGGGCCTCCAGGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAFGGQC*GLQVLT
Trigger: TGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAAA...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGACGTAGGTCTGTTTGGTaGCCAGTGCTGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRRRSVW*PVLGPP
Trigger: TGGAGGCCCCAGCACTGGCCACCAAACAGACCTACG...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPEFMWG*PLGFPR
Trigger: CCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTC...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCACAGGCCTCCCAGGGTaGTGTCTCCATCGATACGGA +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGTGLPG*CLHRYG
Trigger: TCCGTATCGATGGAGACATCACCCTGGGAGGCCTGT...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp AGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGGTCCGGGTCGTTGTTaGTGCGGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RSSGAEEKMTVVGLGQLRGPGRC*CGPGQR
Trigger: TCTTTGCCCTGGACCGCATCAACAACGACCCGGACC...CCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACAGACGTCCTCTTGGGAAGAATGGTGACTGCACCTTCAGCCACTTCCTCAAGGGGTCCGGGTCGTTGTTaGTGCGGTCCAGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TDVLLGRMVTAPSATSSRGPGRC*CGPGQR
Trigger: TCTTTGCCCTGGACCGCATCAACAACGACCCGGACC...CCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTTGCGGGCGCCCAACGTaGTGTTGGGCAGTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: NEVQWCRRENDSGRVGATCGRPT*CWAVGP
Trigger: CGGACCTACTGCCCAACATCACGTTGGGCGCCCGCA...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGACACATAGTTCCACTTaGGGGCCCGGACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTTHSST*GPGRCP
Trigger: TGGACATCGTCCGGGCCCTCAAGTGGAACTATGTGT...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAACACATAGTTCCACTTaGGGGCCCGGACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRTHSST*GPGRCP
Trigger: TGGACATCGTCCGGGCCCTCAAGTGGAACTATGTGT...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTGCCGTAGCTACCCTCTaGGGCCAGCGTGGACACATA +
Preference number: 4 (lower is better)
Translates to: KFPTTAEDAGAPSCLLPTAVATL*GQRGHI
Trigger: TATGTGTCCACGCTGGCCTCAGAGGGTAGCTACGGC...AGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCTGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPCSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGTGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RRCRGSLVPAPNLGIIPSCSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...CGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCCCCGGCCCGAGGCCTTaGCGATCGGAGTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: SCYTSETITKHSGTELRVPGPRP*RSECRC
Trigger: ACAACGACACTCCGATCGTCAAGGCCTCGGGCCGGG...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR TCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCCCGAGATGTCACACTTaGGCACACCCCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLPRCHT*AHPGRS
Trigger: GCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGG...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAGCACGCCTCGAGTCTTaGTGGCATACACAGTACACG +
Preference number: 4 (lower is better)
Translates to: FYCPQHQATFVDAHEAGRARLES*WHTQYT
Trigger: CGTGTACTGTGTATGCCATCAAGACTCGAGGCGTGC...TCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCATCCCCAGGGACACTaGAGCGCTCAGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: SDGWGFYCPQHQATFVDAHPQGH*SAQTHR
Trigger: TCTGTGAGTCTGAGCGCTTCAGTGTCCCTGGGGATG...GGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCCATGGTTGGTGTAAGTaGCGTAGGTCTGTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSHGWCK*RRSVWW
Trigger: CCACCAAACAGACCTACGTCACTTACACCAACCATG...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCACGGTCTGGTTGGCCCTaGGCGCTGCCTCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: REQKEKYRSREPKQTTHARSGWP*ALPPAP
Trigger: GGGTGCTGGAGGCAGCGCGCAGGGCCAACCAGACCG...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCCAGCAAACCAGATGTTaGGCCTGTTGTTGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: RNHPFGHSFCSPLGGPSGQQTRC*ACCCQA
Trigger: CGCTTGACAACAACAGGCGCAACATCTGGTTTGCTG...GCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGCGTCGATCACAAACTaGACCTTCCCCTCCTGTTCG +
Preference number: 4 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRASITN*TFPSCS
Trigger: CGAACAGGAGGGGAAGGTGCAGTTTGTGATCGACGC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATTCACGATGCATGGCGTaGAGAGCATGGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDSRCMA*RAWPMA
Trigger: CGCCATGGGCCATGCTCTGCACGCCATGCATCGTGA...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAACAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQQMPSN*SEMRTK
Trigger: CTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTG...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp ATGGCTCGCCCAGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: MARPAVMAGDSTVLSTKPQMPSN*SEMRTK
Trigger: CTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTG...TGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCTGGGCGAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATCCAGGGCAAAGAGCATaGCCTCCAGCCGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDPGQRA*PPAGGY
Trigger: GTATCCACCGGCTGGAGGCCATGCTCTTTGCCCTGG...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGTTCTCTCGGGACTTCTaGATAAAGGCCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: SQLRNHPFGHSFCSPLGGFSRDF*IKASTP
Trigger: CGGCGTGGAGGCCTTTATCCAGAAGTCCCGAGAGAA...CCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGTTCTCTCGGGACTTCTaGATAAAGGCCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTFSRDF*IKASTP
Trigger: CGGCGTGGAGGCCTTTATCCAGAAGTCCCGAGAGAA...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGAGTGGCCGGTCTGGTTaGCCCTGCGCGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLSGRSG*PCALPP
Trigger: TGGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACT...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTAAGAAGTGGCCGGTCTaGTTGGCCCTGCGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: NEVQWCRRENDSGRVGATKKWPV*LALRAA
Trigger: GGCAGCGCGCAGGGCCAACCAGACCGGCCACTTCTT...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCCCCATCCAAAAGAAGTaGCCGGTCTGGTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGPIQKK*PVWLAL
Trigger: CAGGGCCAACCAGACCGGCCACTTCTTTTGGATGGG...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTTGGCACGGGGGCGCTCTTaGAGCCCCAGCTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: ATHQRPSPNTQALNSVSLARGRS*SPSYQN
Trigger: GTTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGC...CAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR CCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADIVHFLM*LPFLSA
Trigger: CGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCAC...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CCA 90 bp TCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: STVLSTKPHSWMPTRQADVHFLM*LPFLSA
Trigger: CGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCAC...GTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CCA 90 bp TTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTGTGTGGCACAACCTGGCAGAGCATGGCCCATaGCGTACACGGCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: FGVGHNIRLEGRPVWHNLAEHGP*RTRRRS
Trigger: TGATCGACGCCGTGTACGCCATGGGCCATGCTCTGC...CAGGTTGTGCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCAGAGCATGGCCCATaGCGTACACGGCGTCGATCA +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDAEHGP*RTRRRS
Trigger: TGATCGACGCCGTGTACGCCATGGGCCATGCTCTGC...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCTCTGTCCGCAGCCGTCAGTGTGGTTGTCTaGATGTACAGCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: CTILRGCGSSACLALSAAVSVVV*MYSLSA
Trigger: GGCTGACAAGCTGTACATCCAGACAACCACACTGAC...GGCTGCGGACAGAGCCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp AGTGCTGGGGCCTCCAGGTTCTCACACAGCTCTGACTaGGCTTCCCCATTAGGCCTGAAGTTGCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SAGASRFSHSSD*ASPLGLKLPFC
Trigger: ACAGAAGGGCAACTTCAGGCCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAACCTGGAGGCCCCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDEFMWG*PLGFPR
Trigger: CCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTC...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ACAGACGTCCTCTTGGGAAGAATGGTGACTGCACCTTCAGCCACTTCCTCAAGGTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TDVLLGRMVTAPSATSSRCRPSR*APAQRS
Trigger: TGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCA...CCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCACACATAGTTCCACTTaGGGGCCCGGACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPTHSST*GPGRCP
Trigger: TGGACATCGTCCGGGCCCTCAAGTGGAACTATGTGT...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp GCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTTGCAGCACAGCCCAGGGTaGGTCCCACTCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: ATHQRPSPNTQALNSVSLQHSPG*VPLQLD
Trigger: GTCAAGTTGGAGTGGGACTCACCCTGGGCTGTGCTG...CAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR TCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATGTAGCGCACAAAAGTaGCCACCACGAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRCSAQK*PPRTAW
Trigger: CCACGCTGTTCGTGGTGGTCACTTTTGTGCGCTACA...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTCAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: NFQQLQKMQGLPRACSQLQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...AAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCCGGGTGGAAGAGGATaGTGTAGACTTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHPGGRG*CRLWAC
Trigger: ACATGCCCAAAGTCTACATCATCCTCTTCCACCCGG...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGCCGGGTGGAAGAGGATaGTGTAGACTTTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTPGGRG*CRLWAC
Trigger: ACATGCCCAAAGTCTACATCATCCTCTTCCACCCGG...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCTGTTGTTGTCAAGCGTaGGGCTGGAGAAGTATCGGT +
Preference number: 4 (lower is better)
Translates to: TVLSTKPHSWMPTRQADICCCQA*GWRSIG
Trigger: ACCGATACTTCTCCAGCCGCACGCTTGACAACAACA...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp CTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCCAGCAAACCAGATGTTaGGCCTGTTGTTGTCAAGCG +
Preference number: 4 (lower is better)
Translates to: LGILLSSAPSHIRGCPRGQQTRC*ACCCQA
Trigger: CGCTTGACAACAACAGGCGCAACATCTGGTTTGCTG...GCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR GCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCTCACGATGCATGGCGTaGAGAGCATGGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLSRCMA*RAWPMA
Trigger: CGCCATGGGCCATGCTCTGCACGCCATGCATCGTGA...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGTACTGGTACCCCGTaGAGGGCTCGCAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVGTGTP*RARSAS
Trigger: GCTGGCACTGCGAGCCCTGCACGGGGTACCAGTACC...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp GCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTTGCGCTTGGGCACGTTCTaGTCCGGGTGGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ATHQRPSPNTQALNSVSLRLGTF*SGWKRM
Trigger: CATCCTCTTCCACCCGGAGCAGAACGTGCCCAAGCG...CAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR CCA 90 bp TTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCTGTGTGGCACAACCTGCCCATCCAAAAGAAGTaGCCGGTCTGGTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FGVGHNIRLEGRPVWHNLPIQKK*PVWLAL
Trigger: CAGGGCCAACCAGACCGGCCACTTCTTTTGGATGGG...CAGGTTGTGCCACACAGGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp AAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGAGTGCACTTCTTGATGTaGCTTCCCTTCTTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: KMQGLPRACSQLRNHPFGVHFLM*LPFLSA
Trigger: CGCGCTCAAGAAGGGAAGCCACATCAAGAAGTGCAC...TCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAATGTACTTAAGCAGCTaGGTGCCATCCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAMYLSS*VPSTGS
Trigger: GGACCCTGTGGATGGCACCCAGCTGCTTAAGTACAT...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGGGTCAAGTGTCCGCTaGTCCTGGAAGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLGSSVR*SWKSTT
Trigger: GGTGGTGGACTTCCAGGACCAGCGGACACTTGACCC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCAGTCAGTGTGGTTGTCTaGATGTACAGCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSVSVVV*MYSLSA
Trigger: GGCTGACAAGCTGTACATCCAGACAACCACACTGAC...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp CCATTAGGCCTGAAGTTGCCCTTCTGTGTGAACTTGTaGGACATGGTGGCGGCGGTGACAACGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PLGLKLPFCVNL*DMVAAVTTALR
Trigger: CCTCAAAGCCGTTGTCACCGCCGCCACCATGTCCAACAAGTTCACACAGAAGGGCAACTTCAGGCCTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
3UTR CAA 72 bp TCCCCATTAGGCCTGAAGTTGCCCTTCTGTGTGAACTaGTTGGACATGGTGGCGGCGGTGACAACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPLGLKLPFCVN*LDMVAAVTTAL
Trigger: CAAAGCCGTTGTCACCGCCGCCACCATGTCCAACAAGTTCACACAGAAGGGCAACTTCAGGCCTAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCTCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPSWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCATCCCTTCGGATCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: KMQGLPRACSQLRNHPFGSWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...TCCGAAGGGATGATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATTCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHSWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGTCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTSWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGTGTTGTTGTCAAGCGTaGGGCTGGAGAAGTATCGGT +
Preference number: 4 (lower is better)
Translates to: LGIIPSDTVSALPWAGHQCCCQA*GWRSIG
Trigger: ACCGATACTTCTCCAGCCGCACGCTTGACAACAACA...CTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR GCA 90 bp TGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCCAGATGCCAAGCAACTaGAGCGAGATGAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: WKISNNCRRCRGSLVPAPQMPSN*SEMRTK
Trigger: CTTCGTCCTCATCTCGCTGCAGTTGCTTGGCATCTG...GGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp CAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCATTCTCTCGGGACTTCTaGATAAAGGCCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: QWCRRENDSGRVGATQGAFSRDF*IKASTP
Trigger: CGGCGTGGAGGCCTTTATCCAGAAGTCCCGAGAGAA...TGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGGAATCTTCACCGACTaGGCAATGCACACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLGIFTD*AMHTPP
Trigger: CGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGGCACGGGGGCGCTCTTaGAGCCCCAGCTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLARGRS*SPSYQN
Trigger: GTTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGC...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp AGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATGGCGCGGCTCAACTTGCAATaGAAGTTGTCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RENDSGRVGATQGAGQMARLNLQ*KLSSQN
Trigger: GTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCG...CGCCATCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CCA 90 bp GTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCCGGCTCAACTTGCAATaGAAGTTGTCCTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VMAGDSTVLSTKPHSWMPRLNLQ*KLSSQN
Trigger: GTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCG...GGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAAGGGCAGGCTGCAGATaGAGCGTGGCAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: REQKEKYRSREPKQTTHARAGCR*SVAAAG
Trigger: GCCAGCAGCTGCCACGCTCCATCTGCAGCCTGCCCT...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGTCAGTGTGGTTGTCTaGATGTACAGCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRVSVVV*MYSLSA
Trigger: GGCTGACAAGCTGTACATCCAGACAACCACACTGAC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCTTTGGTGGCCAGTGCTaGGGCCTCCAGGTTCTCACA +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLFGGQC*GLQVLT
Trigger: TGTGAGAACCTGGAGGCCCCAGCACTGGCCACCAAA...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp ATGTGGCTTCCCTTCTTGAGCGCGTGGCGGCTCAACTaGCAATGGAAGTTGTCCTCCCAGAACTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: MWLPFLSAWRLN*QWKLSSQNSAN
Trigger: GTTTGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR TCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NEVQWCRRENDSGRVGATCRPSR*APAQRS
Trigger: TGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCA...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGCCGTAGCTACCCTCTaGGGCCAGCGTGGACACATA +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVAVATL*GQRGHI
Trigger: TATGTGTCCACGCTGGCCTCAGAGGGTAGCTACGGC...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp GCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGAGCAGGGCAGATCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: AEEKMTVVGLGQLREQGRSWEEW*LHLQPL
Trigger: AAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGA...TCTGCCCTGCTCCCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTAGCCCAGGAGGCAGATaGGCGACAGGTCCGAGATGT +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVSPGGR*ATGPRC
Trigger: ACATCTCGGACCTGTCGCTCATCTGCCTCCTGGGCT...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDVLTQL*LGFPIR
Trigger: CCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAAC...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp TGCTCCCAACTTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: CSQLRNHPFGHSFCSPLGRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...GCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAAGTTGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAACCATGGCCTGGGCCTaGTATGTGTCCGAGGGCACG +
Preference number: 4 (lower is better)
Translates to: REQKEKYRSREPKQTTHATMAWA*YVSEGT
Trigger: CGTGCCCTCGGACACATACCAGGCCCAGGCCATGGT...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTAGGAGCCATAAAGGCTaGGGAGTAGGCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVRSHKG*GVGRGA
Trigger: TGCCCCTCTGCCTACTCCTCAGCCTTTATGGCTCCT...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGAGGAGCCATAAAGGCTaGGGAGTAGGCAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLRSHKG*GVGRGA
Trigger: TGCCCCTCTGCCTACTCCTCAGCCTTTATGGCTCCT...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLQVVCP*ADDLVL
Trigger: GAGTACAAGGTCATCGGCTCATGGACAGACCACTTG...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTCAGGCTCTGCGATCATaGGGAAGGTGGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVQALRS*GRWWHS
Trigger: GCTATGCCACCACCTTCCTCATGATCGCAGAGCCTG...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCGAAGATGCGGCGGAGTaGACAGGTCCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRKKNTGVESPNRQHMQSEDAAE*TGPQVR
Trigger: CCTGACCTGGGGACCTGTTCACTCCGCCGCATCTTC...GCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCCCGAGATGTCACACTTaGGCACACCCCGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SRKKNTGVESPNRQHMQSPRCHT*AHPGRS
Trigger: GCTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGG...GCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGACTGCTCCAGGGCGTaGGTATCCCTTGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: REQKEKYRSREPKQTTHADCSRA*VSLEQV
Trigger: CACCTGCTCAAGGGATACCCACGCCCTGGAGCAGTC...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGGGTCTTGGGTTCCCGTaGAATCTTCACCGACTGGGC +
Preference number: 4 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLGLGFP*NLHRLG
Trigger: GCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACC...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTACACATAGTTCCACTTaGGGGCCCGGACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVTHSST*GPGRCP
Trigger: TGGACATCGTCCGGGCCCTCAAGTGGAACTATGTGT...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAAGTGGTCTGTCCATaGGCCGATGACCTTGTACTC +
Preference number: 4 (lower is better)
Translates to: NEVQWCRRENDSGRVGATQVVCP*ADDLVL
Trigger: GAGTACAAGGTCATCGGCTCATGGACAGACCACTTG...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR TCA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: NEVQWCRRENDSGRVGATVLTQL*LGFPIR
Trigger: CCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAAC...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR GCA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGCGTCGATCACAAACTaGACCTTCCCCTCCTGTTCG +
Preference number: 4 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVASITN*TFPSCS
Trigger: CGAACAGGAGGGGAAGGTGCAGTTTGTGATCGACGC...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp ATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCGTCAGTGTGGTTGTCTaGATGTACAGCTTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: MRSSGAEEKMTVVGLGQLVSVVV*MYSLSA
Trigger: GGCTGACAAGCTGTACATCCAGACAACCACACTGAC...GAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
3UTR CAA 72 bp ATGATGGCTCTGGCATTGGACGTTTCCAGAAGGCGTTaGATGATCTTGTCAAACTCCCCGGTCTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: MMALALDVSRRR*MILSNSPVLGS
Trigger: GGAACCCAAGACCGGGGAGTTTGACAAGATCATCAAACGCCTTCTGGAAACGTCCAATGCCAGAGCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR GCA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCCGCTCTATTCTGAGGTaGAAGTGGTCTGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SCYTSETITKHSGTELRVRSILR*KWSVHE
Trigger: CTCATGGACAGACCACTTGCACCTCAGAATAGAGCG...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS-3UTR GCA 90 bp AGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCACAGCGTGGCAGCAATaGCCACCACAGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRKKNTGVESPNRQHMQSTAWQQ*PPQPGR
Trigger: TCTTCCTGGCTGTGGTGGGCATTGCTGCCACGCTGT...GCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGTGTCAAGCGTGCGGCTaGAGAAGTATCGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLCQACG*RSIGQT
Trigger: GGTTTGACCGATACTTCTCCAGCCGCACGCTTGACA...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR TCA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGTTCTCACACAGCTCTaGCTTGGCTTCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: REQKEKYRSREPKQTTHAVLTQL*LGFPIR
Trigger: CCTAATGGGGAAGCCAAGTCAGAGCTGTGTGAGAAC...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CCA 90 bp CAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCAGTGTCAAGCGTGCGGCTaGAGAAGTATCGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QKEKYRSREPKQTTHAEQCQACG*RSIGQT
Trigger: GGTTTGACCGATACTTCTCCAGCCGCACGCTTGACA...CTGCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS TCA 90 bp GTGGGCCCCCGCTGCCGCAGCGGACCTCCGTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCAGGGACTGCTCCAGGGCGTGGGTAT +
Preference number: 5 (lower is better)
Translates to: VGPRCRSGPPCRPSR*APAQRSGTAPGRGY
Trigger: ATACCCACGCCCTGGAGCAGTCCCTGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCACGGAGGTCCGCTGCGGCAGCGGGGGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp ATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGGCGCCCAACGTGATGTaGGGCAGTAGGTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: MPTRQADISRALGNGPGRAPNVM*GSRSGS
Trigger: CGACCCGGACCTACTGCCCAACATCACGTTGGGCGC...CCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGAGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: QPLSLLQLPTMARPAVMAKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...AGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAEALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: RQADISRALGNGPGRMHHALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: LELPQPLSLLQLPTMARPALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCGCTTTGAGGCTGCGCTaGCGCTTGGGCACGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AGRHQQGPREWPWPDAPSALRLR*RLGTFC
Trigger: GCAGAACGTGCCCAAGCGCAAGCGCAGCCTCAAAGC...GGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS CCA 90 bp AGCTCCGATGACACCCACCACTCGTTCAGGCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCGGACCTCCGTGCCGTCCTTCTCGAT +
Preference number: 5 (lower is better)
Translates to: SSDDTHHSFRLGDDG*APAAAADLRAVLLD
Trigger: ATCGAGAAGGACGGCACGGAGGTCCGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAGCCTGAACGAGTGGTGGGTGTCATCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp CACCTTCCCCTCCTGTTCGTAGGCCGAGTCCTGCCCGATGCGCTCTCGGTTGGTGCGCCCAACGTGATGTaGGGCAGTAGGTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: HLPLLFVGRVLPDALSVGAPNVM*GSRSGS
Trigger: CGACCCGGACCTACTGCCCAACATCACGTTGGGCGC...ACCAACCGAGAGCGCATCGGGCAGGACTCGGCCTACGAACAGGAGGGGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCAACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPTTRSG*VMMGGP
Trigger: GGGCCCACCCATCATCACCAAGCCTGAACGAGTGGT...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCAAGAGGCGGAGGATGTaGGCCACCATGATCGAGACG +
Preference number: 5 (lower is better)
Translates to: PRGRQTSAGPSGMALAGCKRRRM*ATMIET
Trigger: CGTCTCGATCATGGTGGCCAACATCCTCCGCCTCTT...GCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCGAGATGTCACACTaGAGCACACCCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPSEMSH*STPRAK
Trigger: CTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGA...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCGGTGACAACGGCTTaGAGGCTGCGCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LELPQPLSLLQLPTMARPAVTTA*RLRLRL
Trigger: CAAGCGCAAGCGCAGCCTCAAAGCCGTTGTCACCGC...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGACCCTTCTGTGTGAACTaGTTGGACATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: CPRGRQTSAGPSGMALAGPFCVN*LDMVAA
Trigger: CGCCGCCACCATGTCCAACAAGTTCACACAGAAGGG...TCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS CCA 90 bp TCCTTCTTCAACTCGCCGCAGGCCTTGCCCTCGGAGCCGCGACCGTaGACGGGAAACAGGCCTCCCAGGGTGATGTCTCCATCGATACGG +
Preference number: 5 (lower is better)
Translates to: SFFNSPQALPSEPRP*TGNRPPRVMSPSIR
Trigger: CCGTATCGATGGAGACATCACCCTGGGAGGCCTGTTTCCCGTCCACGGTCGCGGCTCCGAGGGCAAGGCCTGCGGCGAGTTGAAGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp TCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: STVLSTKPHSWMPTRQADKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...GTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCAAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LSSAPSHIRGCPRGRQTSKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...TGATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGACGGAGGCAGAAGGAGGGAGAAAAAGCCAGGACTGGGCTCTCGAGACCGAGCAGGCTGCGCTTGCGCTaGGGCACGTTCTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: RRRQKEGEKARTGLSRPSRLRLR*GTFCSG
Trigger: CCCGGAGCAGAACGTGCCCAAGCGCAAGCGCAGCCT...GCTCGGTCTCGAGAGCCCAGTCCTGGCTTTTTCTCCCTCCTTCTGCCTCCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GATGCCCACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGTTCTGTGTGAACTTGTaGGACATGGTGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: DAHEAGRHQQGPREWPWPFCVNL*DMVAAV
Trigger: CACCGCCGCCACCATGTCCAACAAGTTCACACAGAA...CGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCACCCTTCTGTGTGAACTaGTTGGACATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPPFCVN*LDMVAA
Trigger: CGCCGCCACCATGTCCAACAAGTTCACACAGAAGGG...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGAAGAGGCGGAGGATGTaGGCCACCATGATCGAGACG +
Preference number: 5 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAEKRRRM*ATMIET
Trigger: CGTCTCGATCATGGTGGCCAACATCCTCCGCCTCTT...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp GACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCCTCAGAGGAAGAGGCGGAGGATGTaGGCCACCATGATCGAGACG +
Preference number: 5 (lower is better)
Translates to: DISRALGNGPGRMHHPQRKRRRM*ATMIET
Trigger: CGTCTCGATCATGGTGGCCAACATCCTCCGCCTCTT...CCTCTGAGGATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGIIPSDTVSALPWAGHQKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...CTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp TTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAAAGTGGCCGGTCTGGTaGGCCCTGCGCGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FYCPQHQATFVDAHEAGRKWPVW*ALRAAS
Trigger: GGAGGCAGCGCGCAGGGCCAACCAGACCGGCCACTT...TCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGATGTTGCGCCTGTTGTaGTCAAGCGTGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LPWAGHQAGLEGVPRDAEMLRLL*SSVRLE
Trigger: CTCCAGCCGCACGCTTGACAACAACAGGCGCAACAT...CTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp CACGAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCAGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HEAGRHQQGPREWPWPDAESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...TGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATCGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GRQTSAGPSGMALAGCTIESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...GATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTAGAGGGAGTTCCGAGATGTCACACTaGAGCACACCCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: GHSFCSPLGGPSGRARGSSEMSH*STPRAK
Trigger: CTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGA...ACTCCCTCTAGCCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGGCGGTGACAACGGCTTaGAGGCTGCGCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWAVTTA*RLRLRL
Trigger: CAAGCGCAAGCGCAGCCTCAAAGCCGTTGTCACCGC...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GAGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATTCTGTGTGAACTTGTaGGACATGGTGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: EAGRHQQGPREWPWPDAPFCVNL*DMVAAV
Trigger: CACCGCCGCCACCATGTCCAACAAGTTCACACAGAA...TGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS GCA 90 bp GCGCTCTCGGTCTCGCACAGACGTCCTCTTGGGAAGAATGGTGACTaGACCTTCAGCCACTTCCTCAAGGCGCAGCACGGGGGCGCTCTT +
Preference number: 5 (lower is better)
Translates to: ALSVSHRRPLGKNGD*TFSHFLKAQHGGAL
Trigger: AAGAGCGCCCCCGTGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGACCGAGAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TCAAGTGTCCGCTGGTCCTGGAAGTCCACCACCGAGTGGGAGGGGTCCACCACGAAGAGGCGGAGGATGTaGGCCACCATGATCGAGACG +
Preference number: 5 (lower is better)
Translates to: SSVRWSWKSTTEWEGSTTKRRRM*ATMIET
Trigger: CGTCTCGATCATGGTGGCCAACATCCTCCGCCTCTT...CGTGGTGGACCCCTCCCACTCGGTGGTGGACTTCCAGGACCAGCGGACACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp GGCCATCAGGCAGGGCTAGAGGGAGTTCCCAGAGATGCTGAGGGGAAGTGGCCCGCGTGGCGGCTCAACTaGCAATGGAAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GHQAGLEGVPRDAEGKWPAWRLN*QWKLSS
Trigger: GGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGC...GGGCCACTTCCCCTCAGCATCTCTGGGAACTCCCTCTAGCCCTGCCTGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGATGTGGCTTCCCTTCTaGAGCGCGTGGCGGCTCAAC +
Preference number: 5 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWMWLPF*SAWRLN
Trigger: GTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACAT...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RQADISRALGNGPGRMHHESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGAAGGCTGCGCTTGCGCTaGGGCACGTTCTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: FYCPQHQATFVDAHEAGRRLRLR*GTFCSG
Trigger: CCCGGAGCAGAACGTGCCCAAGCGCAAGCGCAGCCT...TCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAAGGCTGCGCTTGCGCTaGGGCACGTTCTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRRLRLR*GTFCSG
Trigger: CCCGGAGCAGAACGTGCCCAAGCGCAAGCGCAGCCT...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RNHPFGHSFCSPLGGPSGTTRSG*VMMGGP
Trigger: GGGCCCACCCATCATCACCAAGCCTGAACGAGTGGT...GCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp CTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGATGGCTGGGGATCAGATGTTGCGCCTGTaGTTGTCAAGCGTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LSLLQLPTMARPAVMAGDQMLRL*LSSVRL
Trigger: CAGCCGCACGCTTGACAACAACAGGCGCAACATCTG...ATCCCCAGCCATCACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGCGCTGACCGACCGCTaGCCCTGCTCAAAGATGCGG +
Preference number: 5 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRALTDR*PCSKMR
Trigger: CCGCATCTTTGAGCAGGGCAAGCGGTCGGTCAGCGC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AAGCCAGGACTGGGCTCTCGAGACCGAGCCCCTGTGCTTTGGAGTAGGACACAAGCGGTGACAACGGCTTaGAGGCTGCGCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: KPGLGSRDRAPVLWSRTQAVTTA*RLRLRL
Trigger: CAAGCGCAAGCGCAGCCTCAAAGCCGTTGTCACCGC...TTGTGTCCTACTCCAAAGCACAGGGGCTCGGTCTCGAGAGCCCAGTCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TGGCCCTGGCCGGATGCACCATCCTCAGAGGTTGTGGCTCTTCAGCCTGCTTGGCCCTTCTGTGTGAACTaGTTGGACATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: WPWPDAPSSEVVALQPAWPFCVN*LDMVAA
Trigger: CGCCGCCACCATGTCCAACAAGTTCACACAGAAGGG...CCAAGCAGGCTGAAGAGCCACAACCTCTGAGGATGGTGCATCCGGCCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GCCACTTCCTCAAGGCGCAGCACGGGGGCGCTCTTGGAGCCCCAGCTATCAGAAAATGCACACGCCTCCTaGAAGAGGCGGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: ATSSRRSTGALLEPQLSENAHAS*KRRRML
Trigger: CAACATCCTCCGCCTCTTCAAGGAGGCGTGTGCATT...TTCTGATAGCTGGGGCTCCAAGAGCGCCCCCGTGCTGCGCCTTGAGGAAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp ATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGGCAGGGCTGATCTGGGGGATCTaGAAGAGGCGGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: IIPSDTVSALPWAGHQAGLIWGI*KRRRML
Trigger: CAACATCCTCCGCCTCTTCAAGATCCCCCAGATCAG...CCCTGCCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AACACTCAGGCACTGAACTCCGTGTCGTTGGCAGGAAGGGCAAGGCGGACAGGCATGTTGCGCCTGTTGTaGTCAAGCGTGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: NTQALNSVSLAGRARRTGMLRLL*SSVRLE
Trigger: CTCCAGCCGCACGCTTGACAACAACAGGCGCAACAT...GCCTGTCCGCCTTGCCCTTCCTGCCAACGACACGGAGTTCAGTGCCTGAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CAA 90 bp AGGCAGGCAGACATCAGCAGGGCCCTCGGGAATGGCCCTGGCCGGATGCACCATTCAGCAAACCAGATGTaGCGCCTGTTGTTGTCAAGC +
Preference number: 5 (lower is better)
Translates to: RQADISRALGNGPGRMHHSANQM*RLLLSS
Trigger: GCTTGACAACAACAGGCGCAACATCTGGTTTGCTGA...ATGGTGCATCCGGCCAGGGCCATTCCCGAGGGCCCTGCTGATGTCTGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp CTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAGCAGTGTCAGCAAACCAGATGTaGCGCCTGTTGTTGTCAAGC +
Preference number: 5 (lower is better)
Translates to: LPQPLSLLQLPTMARPAVSANQM*RLLLSS
Trigger: GCTTGACAACAACAGGCGCAACATCTGGTTTGCTGA...CACTGCTGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGCTTTGAGGCTGCGCTaGCGCTTGGGCACGTTCTGC +
Preference number: 5 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRALRLR*RLGTFC
Trigger: GCAGAACGTGCCCAAGCGCAAGCGCAGCCTCAAAGC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTCAGGGCGCCCAACGTGATGTaGGGCAGTAGGTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: RSSGAEEKMTVVGLGQLRAPNVM*GSRSGS
Trigger: CGACCCGGACCTACTGCCCAACATCACGTTGGGCGC...CCTGAGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GACCGAGCCCCTGTGCTTTGGAGTAGGACACAACATCCGTCTGGAAGGAAGGCCCAGATGTTGCGCCTGTaGTTGTCAAGCGTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: DRAPVLWSRTQHPSGRKAQMLRL*LSSVRL
Trigger: CAGCCGCACGCTTGACAACAACAGGCGCAACATCTG...GGCCTTCCTTCCAGACGGATGTTGTGTCCTACTCCAAAGCACAGGGGCTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CAA 90 bp CTGGAGCTGCCCCAGCCACTTAGCCTCCTCCAGTTGCCCACCATGGCTCGCCCAAACTTGCAATGGAAGTaGTCCTCCCAGAACTCAGCA +
Preference number: 5 (lower is better)
Translates to: LELPQPLSLLQLPTMARPNLQWK*SSQNSA
Trigger: TGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTT...TGGGCGAGCCATGGTGGGCAACTGGAGGAGGCTAAGTGGCTGGGGCAGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATATGTGGCTTCCCTTCTaGAGCGCGTGGCGGCTCAAC +
Preference number: 5 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHMWLPF*SAWRLN
Trigger: GTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACAT...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCATCCGAGATGTCACACTaGAGCACACCCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQASEMSH*STPRAK
Trigger: CTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGA...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SDGWGFYCPQHQATFVDATTRSG*VMMGGP
Trigger: GGGCCCACCCATCATCACCAAGCCTGAACGAGTGGT...GGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAAAGAGGCGGAGGATGTaGGCCACCATGATCGAGACG +
Preference number: 5 (lower is better)
Translates to: DSTVLSTKPHSWMPTRQAKRRRM*ATMIET
Trigger: CGTCTCGATCATGGTGGCCAACATCCTCCGCCTCTT...TGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATATGTTGCGCCTGTTGTaGTCAAGCGTGCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHMLRLL*SSVRLE
Trigger: CTCCAGCCGCACGCTTGACAACAACAGGCGCAACAT...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGCGTGGCGGCTCAACTaGCAATGGAAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRAWRLN*QWKLSS
Trigger: GGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGC...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp GGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAATGTGGCTTCCCTTCTaGAGCGCGTGGCGGCTCAAC +
Preference number: 5 (lower is better)
Translates to: GKFPTTAEDAGAPSCLLPMWLPF*SAWRLN
Trigger: GTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACAT...TGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCTTTGAGGCTGCGCTaGCGCTTGGGCACGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDALRLR*RLGTFC
Trigger: GCAGAACGTGCCCAAGCGCAAGCGCAGCCTCAAAGC...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp ACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCTTCTGTGTGAACTTGTaGGACATGGTGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: TVLSTKPHSWMPTRQADIFCVNL*DMVAAV
Trigger: CACCGCCGCCACCATGTCCAACAAGTTCACACAGAA...GATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TCATGCTACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGCGCCCAACGTGATGTaGGGCAGTAGGTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: SCYTSETITKHSGTELRVAPNVM*GSRSGS
Trigger: CGACCCGGACCTACTGCCCAACATCACGTTGGGCGC...GACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTAGCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CAA 90 bp GACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTGGGTCACCAACAAGACACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: DRRETQRQGGDQLGHQQDTTRSG*VMMGGP
Trigger: GGGCCCACCCATCATCACCAAGCCTGAACGAGTGGT...GTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TTCTTGATGTGGCTTCCCTTCTTGAGCGCGTGGCGGCTCAACTTGCAATGGAAGACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: FLMWLPFLSAWRLNLQWKTTRSG*VMMGGP
Trigger: GGGCCCACCCATCATCACCAAGCCTGAACGAGTGGT...CTTCCATTGCAAGTTGAGCCGCCACGCGCTCAAGAAGGGAAGCCACATCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232243.2
CDS-3UTR CAA 90 bp ATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGCTGATCTGGGGGATCTaGAAGAGGCGGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: MAGDSTVLSTKPHSWMPTLIWGI*KRRRML
Trigger: CAACATCCTCCGCCTCTTCAAGATCCCCCAGATCAG...CGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGACTGATCTGGGGGATCTaGAAGAGGCGGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: WLGILLSSAPSHIRGCPRLIWGI*KRRRML
Trigger: CAACATCCTCCGCCTCTTCAAGATCCCCCAGATCAG...TCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAGGCAGACATCTGATCTGGGGGATCTaGAAGAGGCGGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: YCPQHQATFVDAHEAGRHLIWGI*KRRRML
Trigger: CAACATCCTCCGCCTCTTCAAGATCCCCCAGATCAG...ATGTCTGCCTGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGCAGTGATGGCTGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATTCCGAGATGTCACACTaGAGCACACCCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SSDGWGFYCPQHQATFVDSEMSH*STPRAK
Trigger: CTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGA...ATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCAGCCATCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp GACAGAAGAGAAACGCAAAGACAGGGTGGGGACCAACTGGGTCACCAACAAGACTCCGAGATGTCACACTaGAGCACACCCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: DRRETQRQGGDQLGHQQDSEMSH*STPRAK
Trigger: CTTCGCCCGGGGTGTGCTCAAGTGTGACATCTCGGA...GTCTTGTTGGTGACCCAGTTGGTCCCCACCCTGTCTTTGCGTTTCTCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TACACATCAGAGACCATCACCAAACACTCAGGCACTGAACTCCGTGTCGTTGGCGCTTTGAGGCTGCGCTaGCGCTTGGGCACGTTCTGC +
Preference number: 5 (lower is better)
Translates to: YTSETITKHSGTELRVVGALRLR*RLGTFC
Trigger: GCAGAACGTGCCCAAGCGCAAGCGCAGCCTCAAAGC...GCCAACGACACGGAGTTCAGTGCCTGAGTGTTTGGTGATGGTCTCTGATGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
CDS CCA 90 bp TTGTCAAACTCCCCGGTCTTGGGTTCCCGTGGAATCTTCACCGACTaGGCAATGCACACGCCTCCGTTCTCTCGGGACTTCTGGATAAAG +
Preference number: 5 (lower is better)
Translates to: LSNSPVLGSRGIFTD*AMHTPPFSRDFWIK
Trigger: CTTTATCCAGAAGTCCCGAGAGAACGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACCGGGGAGTTTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp TATTATGGAAAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGGCGCCCAACGTGATGTaGGGCAGTAGGTCCGGGTCG +
Preference number: 5 (lower is better)
Translates to: YYGKFPTTAEDAGAPSCLAPNVM*GSRSGS
Trigger: CGACCCGGACCTACTGCCCAACATCACGTTGGGCGC...CAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTTTCCATAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AAATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTCAGATGTTGCGCCTGTaGTTGTCAAGCGTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: KFPTTAEDAGAPSCLLPTQMLRL*LSSVRL
Trigger: CAGCCGCACGCTTGACAACAACAGGCGCAACATCTG...AGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp CGGGAGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAAGGCTGCGCTTGCGCTaGGGCACGTTCTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: REQKEKYRSREPKQTTHARLRLR*GTFCSG
Trigger: CCCGGAGCAGAACGTGCCCAAGCGCAAGCGCAGCCT...TGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AATTTCCAACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NFQQLQKMQGLPRACSQLESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...AAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTTGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AACAACTGCAGAAGATGCAGGGGCTCCCTCGTGCCTGCTCCCAACTTAGGAATCTCAGCAAACCAGATGTaGCGCCTGTTGTTGTCAAGC +
Preference number: 5 (lower is better)
Translates to: NNCRRCRGSLVPAPNLGISANQM*RLLLSS
Trigger: GCTTGACAACAACAGGCGCAACATCTGGTTTGCTGA...GATTCCTAAGTTGGGAGCAGGCACGAGGGAGCCCCTGCATCTTCTGCAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp TGGGGATTCTACTGTCCTCAGCACCAAGCCACATTCGTGGATGCCCACGAGGCAAACTTGCAATGGAAGTaGTCCTCCCAGAACTCAGCA +
Preference number: 5 (lower is better)
Translates to: WGFYCPQHQATFVDAHEANLQWK*SSQNSA
Trigger: TGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTT...TGCCTCGTGGGCATCCACGAATGTGGCTTGGTGCTGAGGACAGTAGAATCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118161.3
ENSMUST00000231290.2
CDS-3UTR CAA 90 bp TTAGGAATCATCCCTTCGGACACAGTTTCTGCTCTCCCCTGGGCGGGCCATCAGAACTTGCAATGGAAGTaGTCCTCCCAGAACTCAGCA +
Preference number: 5 (lower is better)
Translates to: LGIIPSDTVSALPWAGHQNLQWK*SSQNSA
Trigger: TGCTGAGTTCTGGGAGGACAACTTCCATTGCAAGTT...CTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118489.8
CDS-3UTR CAA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTGCGTGGCGGCTCAACTaGCAATGGAAGTTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: NEVQWCRRENDSGRVGATAWRLN*QWKLSS
Trigger: GGAGGACAACTTCCATTGCAAGTTGAGCCGCCACGC...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118161.3
CDS-3UTR CAA 90 bp AATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTGGGGCAACTGAGTCCCACTCCAACTaGACAATGGGTATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NEVQWCRRENDSGRVGATESHSN*TMGMGW
Trigger: CCAGCCCATACCCATTGTCAAGTTGGAGTGGGACTC...AGTTGCCCCAACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp AGCAGAAAGAAAAATACAGGAGTAGAGAGCCCAAACAGACAACACATGCAGAGCGCGGTGACAACGGCTTaGAGGCTGCGCTTGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SRKKNTGVESPNRQHMQSAVTTA*RLRLRL
Trigger: CAAGCGCAAGCGCAGCCTCAAAGCCGTTGTCACCGC...GCTCTGCATGTGTTGTCTGTTTGGGCTCTCTACTCCTGTATTTTTCTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS-3UTR CAA 90 bp CTGGAAGGAAATGAGGTCCAGTGGTGCAGAAGAGAAAATGACAGTGGTAGGGTTTTCTGTGTGAACTTGTaGGACATGGTGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LEGNEVQWCRRENDSGRVFCVNL*DMVAAV
Trigger: CACCGCCGCCACCATGTCCAACAAGTTCACACAGAA...AACCCTACCACTGTCATTTTCTCTTCTGCACCACTGGACCTCATTTCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118161.3
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS CCA 72 bp GACACCCACCACTCGTTCAGGCTTGGTGATGATGGGTaGGCCCCCGCTGCCGCAGCGGACCTCCGTGCCGTC +
Preference number: 6 (lower is better)
Translates to: DTHHSFRLGDDG*APAAAADLRAV
Trigger: GACGGCACGGAGGTCCGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAGCCTGAACGAGTGGTGGGTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS CAA 90 bp ACGGAGCTCCCCGAAGCTCCGATGACACCCACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCCCCGCTGCCGCAGCGGACCTCCGTG +
Preference number: 6 (lower is better)
Translates to: TELPEAPMTPTTRSG*VMMGGPPLPQRTSV
Trigger: CACGGAGGTCCGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAGCCTGAACGAGTGGTGGGTGTCATCGGAGCTTCGGGGAGCTCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS TCA 72 bp CGCTGCCGCAGCGGACCTCCGTGCCGTCCTTCTCGATaGGCGCCTGCACAAAGGTCAGGGACTGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RCRSGPPCRPSR*APAQRSGTAPG
Trigger: CCCTGGAGCAGTCCCTGACCTTTGTGCAGGCGCTCATCGAGAAGGACGGCACGGAGGTCCGCTGCGGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS CCA 72 bp AACTCGCCGCAGGCCTTGCCCTCGGAGCCGCGACCGTaGACGGGAAACAGGCCTCCCAGGGTGATGTCTCCA +
Preference number: 6 (lower is better)
Translates to: NSPQALPSEPRP*TGNRPPRVMSP
Trigger: TGGAGACATCACCCTGGGAGGCCTGTTTCCCGTCCACGGTCGCGGCTCCGAGGGCAAGGCCTGCGGCGAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS CAA 72 bp CCCGAAGCTCCGATGACACCCACCACTCGTTCAGGCTaGGTGATGATGGGTGGGCCCCCGCTGCCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: PEAPMTPTTRSG*VMMGGPPLPQR
Trigger: CCGCTGCGGCAGCGGGGGCCCACCCATCATCACCAAGCCTGAACGAGTGGTGGGTGTCATCGGAGCTTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS GCA 72 bp GGATACCTTTCTCCTTCTTCAACTCGCCGCAGGCCTTaGCCTCGGAGCCGCGACCGTGGACGGGAAACAGGC +
Preference number: 6 (lower is better)
Translates to: GYLSPSSTRRRP*PRSRDRGRETG
Trigger: GCCTGTTTCCCGTCCACGGTCGCGGCTCCGAGGGCAAGGCCTGCGGCGAGTTGAAGAAGGAGAAAGGTATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS GCA 72 bp CCTTCCCCTCCTGTTCGTAGGCCGAGTCCTGCCCGATaGGCTCTCGGTCTCGCACAGACGTCCTCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: PSPPVRRPSPAR*ALGLAQTSSWE
Trigger: TTCCCAAGAGGACGTCTGTGCGAGACCGAGAGCGCATCGGGCAGGACTCGGCCTACGAACAGGAGGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS CAA 72 bp TGGATACCTTTCTCCTTCTTCAACTCGCCGCAGGCCTaGCCCTCGGAGCCGCGACCGTGGACGGGAAACAGG +
Preference number: 6 (lower is better)
Translates to: WIPFSFFNSPQA*PSEPRPWTGNR
Trigger: CCTGTTTCCCGTCCACGGTCGCGGCTCCGAGGGCAAGGCCTGCGGCGAGTTGAAGAAGGAGAAAGGTATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2
CDS CCA 72 bp TCCCCGGTCTTGGGTTCCCGTGGAATCTTCACCGACTaGGCAATGCACACGCCTCCGTTCTCTCGGGACTTC +
Preference number: 6 (lower is better)
Translates to: SPVLGSRGIFTD*AMHTPPFSRDF
Trigger: GAAGTCCCGAGAGAACGGAGGCGTGTGCATTGCCCAGTCGGTGAAGATTCCACGGGAACCCAAGACCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS GCA 72 bp GTCTCGCACAGACGTCCTCTTGGGAAGAATGGTGACTaGACCTTCAGCCACTTCCTCAAGGCGCAGCACGGG +
Preference number: 6 (lower is better)
Translates to: VSHRRPLGKNGD*TFSHFLKAQHG
Trigger: CCCGTGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS CAA 72 bp TGCCCGATGCGCTCTCGGTCTCGCACAGACGTCCTCTaGGGAAGAATGGTGACTGCACCTTCAGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: CPMRSRSRTDVL*GRMVTAPSATS
Trigger: GGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGACCGAGAGCGCATCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS TCA 72 bp CTCGGTCTCGCACAGACGTCCTCTTGGGAAGAATGGTaGCTGCACCTTCAGCCACTTCCTCAAGGCGCAGCA +
Preference number: 6 (lower is better)
Translates to: LGLAQTSSWEEW*LHLQPLPQGAA
Trigger: TGCTGCGCCTTGAGGAAGTGGCTGAAGGTGCAGTCACCATTCTTCCCAAGAGGACGTCTGTGCGAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231416.2
ENSMUST00000231809.2
CDS TCA 72 bp ATGTCTCCATCGATACGGATAGAGTTCATGTGGGGGTaGCCCTTGGGCTTTCCTAGGGATGAAGGCACCCAG +
Preference number: 6 (lower is better)
Translates to: MSPSIRIEFMWG*PLGFPRDEGTQ
Trigger: CTGGGTGCCTTCATCCCTAGGAAAGCCCAAGGGTCACCCCCACATGAACTCTATCCGTATCGATGGAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118161.3
ENSMUST00000118489.8
ENSMUST00000231290.2
ENSMUST00000231809.2
ENSMUST00000232243.2