Pregenerated sensors for GRK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074886Ensembl transcript IDs: ENSMUST00000001115.16, ENSMUST00000099482.5, ENSMUST00000224118.2, ENSMUST00000224653.2, ENSMUST00000224995.2, ENSMUST00000225925.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTaGCTGGGGCTCCCCACAGTCAGGCAGCAAGGCCAACCCATGGGG | + |
Preference number: 1 (lower is better) Translates to: HQTSFSYISPLPRMG*LGLPTVRQQGQPMG Trigger: CCCCATGGGTTGGCCTTGCTGCCTGACTGTGGGGAGCCCCAGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR CCA 90 bp | GCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTGGCTTTCCTaGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGGAAT | + |
Preference number: 1 (lower is better) Translates to: AWSLALAPLASSWLS*PGLIALGCPGPGWN Trigger: ATTCCACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | GCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTaGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCA | + |
Preference number: 1 (lower is better) Translates to: ALEAWSLALAPLASS*LSWPGLIALGCPGP Trigger: TGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | GGGCAGAGGTCTGACCTGGCCCACTCTCTGCTTGCTCATCTCCACTaGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGC | + |
Preference number: 1 (lower is better) Translates to: GQRSDLAHSLLAHLH*ALEAWSLALAPLAS Trigger: GCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGTCAGACCTCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | GTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTaGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGGTCTGACCTGGCC | + |
Preference number: 1 (lower is better) Translates to: VASVHNRQAQVSLGG*WWPVQCCGQRSDLA Trigger: GGCCAGGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | GTGGACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATaGGCTGCCTGGGGCTCCCCACAGTCAGGCAGCAAGGCCAACCCA | + |
Preference number: 1 (lower is better) Translates to: VDTRLLSPTSRLCLG*AAWGSPQSGSKANP Trigger: TGGGTTGGCCTTGCTGCCTGACTGTGGGGAGCCCCAGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR GCA 90 bp | AGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTaGTGTGGGCAGAGGTCTGACCTGGCCCACTCTCTGCTTGCTCAT | + |
Preference number: 1 (lower is better) Translates to: RQAQVSLGGWWWPVQ*CGQRSDLAHSLLAH Trigger: ATGAGCAAGCAGAGAGTGGGCCAGGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR GCA 90 bp | AGGAGACAGTTGCTAAGCAAGGTTAGCAGCTTGAAGGGGTCAGGGTaGAGGGAGGCAAGCGGCAGGGAAGGAGCGGGTAAGGTGGACACC | + |
Preference number: 1 (lower is better) Translates to: RRQLLSKVSSLKGSG*REASGREGAGKVDT Trigger: GGTGTCCACCTTACCCGCTCCTTCCCTGCCGCTTGCCTCCCTGCACCCTGACCCCTTCAAGCTGCTAACCTTGCTTAGCAACTGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR CCA 90 bp | TGGTCCCATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTaGGACAGGCCAGGGCTAGGGTCCGGGGGCTTAGGCACAGCCTTA | + |
Preference number: 1 (lower is better) Translates to: WSHAVLTSIRTAITV*DRPGLGSGGLGTAL Trigger: TAAGGCTGTGCCTAAGCCCCCGGACCCTAGCCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATGGGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR TCA 90 bp | TATGGCCTGGACTGGGGCATTTCTGAAAAAGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACTGTGCTCTGGGAGCTGGAAGGCAGA | + |
Preference number: 1 (lower is better) Translates to: YGLDWGISEKGVFRI*PRIRTTVLWELEGR Trigger: TCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCTTATTCTGGGTCATATCCTGAAGACACCTTTTTCAGAAATGCCCCAGTCCAGGCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | ATGGCAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATaGTCCCATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTC | + |
Preference number: 1 (lower is better) Translates to: MAAYIGFKYGKARAL*SHAVLTSIRTAITV Trigger: GACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 90 bp | TTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGACACATaGCAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTAT | + |
Preference number: 1 (lower is better) Translates to: FAQTRGSSHWSHRDT*QLTLALNMEKPGPY Trigger: ATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTGCCATGTGTCTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CAAGATCTGTCAGAGCAAGGCCTCTGTCCATCCCCCTGGACAGACTCTGGCACACGCCTCTGCCTCGGATaGGCTGCCTGGGGCTCCCCA | + |
Preference number: 2 (lower is better) Translates to: QDLSEQGLCPSPWTDSGTRLCLG*AAWGSP Trigger: TGGGGAGCCCCAGGCAGCCCATCCGAGGCAGAGGCG...TGTGCCAGAGTCTGTCCAGGGGGATGGACAGAGGCCTTGCTCTGACAGATCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR-3UTR CCA 90 bp | CTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGACTCAGCTAGGCCAGTaGCTGAGGAACGGAGGACAC | + |
Preference number: 2 (lower is better) Translates to: LLAFLARANCPGVSRSRVTQLGQ*LRNGGH Trigger: GTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGT...CACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | TGCCAGCTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCCCACAATCCACGGCTTaGGTGGAAAATGGGGAACAC | + |
Preference number: 2 (lower is better) Translates to: CQLLAFLARANCPGVSRSPQSTA*VENGEH Trigger: GTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGG...GGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | CTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGCCACAATCCACGGCTTaGGTGGAAAATGGGGAACAC | + |
Preference number: 2 (lower is better) Translates to: LLAFLARANCPGVSRSRVPQSTA*VENGEH Trigger: GTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGG...CACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACGGCACTGGCTCCTCTTaGCAGCTCCTGGCTTTCCTG | + |
Preference number: 2 (lower is better) Translates to: WLASRVLRMYSHRHVAAHGTGSS*QLLAFL Trigger: CAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCC...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | TCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGGTCTGACCACTCAGCTAGGCCAGTaGCTGAGGAACGGAGGACAC | + |
Preference number: 2 (lower is better) Translates to: SHLEVGGGQCSAVGRGLTTQLGQ*LRNGGH Trigger: GTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGT...GGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GGGAAAGCATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCAGGCACTGGCTCCTCTTaGCAGCTCCTGGCTTTCCTG | + |
Preference number: 2 (lower is better) Translates to: GKALGNQKVVASVHNRQAGTGSS*QLLAFL Trigger: CAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCC...TGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAATGCTTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGACCTGGCCCACTCTCTaGTTGCTCATCTCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: VHNRQAQVSLGGWWWPVQTWPTL*LLISTG Trigger: CCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGT...CTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | CCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGACCTGGCCCACTCTCTaGTTGCTCATCTCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: PQSTTGRHKSHLEVGGGQTWPTL*LLISTG Trigger: CCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGT...CTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AGGACTACTGTGCTCTGGGAGCTGGAAGGCAGAAAGCGACCCATCTCGGGCAGTACTCAGCTAGGCCAGTaGCTGAGGAACGGAGGACAC | + |
Preference number: 2 (lower is better) Translates to: RTTVLWELEGRKRPISGSTQLGQ*LRNGGH Trigger: GTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGT...ACTGCCCGAGATGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AGGACTACTGTGCTCTGGGAGCTGGAAGGCAGAAAGCGACCCATCTCGGGCAGTCCTGGAGTTTGGCACTaGCTCCTCTTGCCAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: RTTVLWELEGRKRPISGSPGVWH*LLLPAP Trigger: AGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGG...ACTGCCCGAGATGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGCCTGGAGTTTGGCACTaGCTCCTCTTGCCAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: PQSTTGRHKSHLEVGGGQPGVWH*LLLPAP Trigger: AGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGG...CTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGCCACAATCCACGGCTTaGGTGGAAAATGGGGAACAC | + |
Preference number: 2 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWPQSTA*VENGEH Trigger: GTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGG...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAGTTGGTGGTGGCCAGTaGAGTGCTGTGGGCAGAGGT | + |
Preference number: 2 (lower is better) Translates to: NQKVVASVHNRQAQVSLGVGGGQ*SAVGRG Trigger: ACCTCTGCCCACAGCACTGCACTGGCCACCACCAAC...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGACTCAGCTAGGCCAGTaGCTGAGGAACGGAGGACAC | + |
Preference number: 2 (lower is better) Translates to: HAVLTSIRTAITVWDRPGTQLGQ*LRNGGH Trigger: GTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGT...CCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AGGACTACTGTGCTCTGGGAGCTGGAAGGCAGAAAGCGACCCATCTCGGGCAGTCTTGCTCATCTCCACTaGGCCCTAGAAGCCTGGAGT | + |
Preference number: 2 (lower is better) Translates to: RTTVLWELEGRKRPISGSLAHLH*ALEAWS Trigger: ACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAG...ACTGCCCGAGATGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGGTCTCACTTGGAGGTTaGTGGTGGCCAGTGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: HAVLTSIRTAITVWDRPGVSLGG*WWPVQC Trigger: GCACTGCACTGGCCACCACCAACCTCCAAGTGAGAC...CCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGCTGTGCTCTGGGAGCTaGAAGGCAGAAAGCGACCCA | + |
Preference number: 2 (lower is better) Translates to: HAVLTSIRTAITVWDRPGLCSGS*KAESDP Trigger: TGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAG...CCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | AGTAAGACTAGGAAGCTCCCAAGATCTGTCAGAGCAAGGCCTCTGTCCATCCCCGCAAGGTTAGCAGCTTaGAGGGGTCAGGGTGCAGGG | + |
Preference number: 2 (lower is better) Translates to: SKTRKLPRSVRARPLSIPARLAA*RGQGAG Trigger: CCCTGCACCCTGACCCCTTCAAGCTGCTAACCTTGC...GGGGATGGACAGAGGCCTTGCTCTGACAGATCTTGGGAGCTTCCTAGTCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR-3UTR CCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCCCTGGAGTTTGGCACTaGCTCCTCTTGCCAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLPGVWH*LLLPAP Trigger: AGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGG...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCGTCTCACTTGGAGGTTaGTGGTGGCCAGTGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLVSLGG*WWPVQC Trigger: GCACTGCACTGGCCACCACCAACCTCCAAGTGAGAC...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | CATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGGGCACAAGTCTCACTTaGAGGTTGGTGGTGGCCAGT | + |
Preference number: 2 (lower is better) Translates to: HAVLTSIRTAITVWDRPGGTSLT*RLVVAS Trigger: ACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC...CCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGGGCACTGGCTCCTCTTaGCAGCTCCTGGCTTTCCTG | + |
Preference number: 2 (lower is better) Translates to: GILECWRANSNSSYGLDWGTGSS*QLLAFL Trigger: CAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCC...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | ACTGAAGTAAGACTAGGAAGCTCCCAAGATCTGTCAGAGCAAGGCCTCTGTCCATTGAAGGGGTCAGGGTaGAGGGAGGCAAGCGGCAGG | + |
Preference number: 2 (lower is better) Translates to: TEVRLGSSQDLSEQGLCPLKGSG*REASGR Trigger: CCTGCCGCTTGCCTCCCTGCACCCTGACCCCTTCAA...TGGACAGAGGCCTTGCTCTGACAGATCTTGGGAGCTTCCTAGTCTTACTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR-3UTR CCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCGGCACAAGTCTCACTTaGAGGTTGGTGGTGGCCAGT | + |
Preference number: 2 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLGTSLT*RLVVAS Trigger: ACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACACACACAGGGAAGGGTaGATTATTGCTGGGCATGTG | + |
Preference number: 2 (lower is better) Translates to: WLASRVLRMYSHRHVAAHTHREG*IIAGHV Trigger: CACATGCCCAGCAATAATCCACCCTTCCCTGTGTGT...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGACCACAATCCACGGCTTaGGTGGAAAATGGGGAACAC | + |
Preference number: 2 (lower is better) Translates to: NQKVVASVHNRQAQVSLGPQSTA*VENGEH Trigger: GTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGG...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGGGCACTGGCTCCTCTTaGCAGCTCCTGGCTTTCCTG | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIEGTGSS*QLLAFL Trigger: CAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCC...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGTGGTGGCCAGTGCAGTaGTGTGGGCAGAGGTCTGAC | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIEWWPVQ*CGQRSD Trigger: GTCAGACCTCTGCCCACAGCACTGCACTGGCCACCA...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGCTTGGAGGTTGGTGGTaGCCAGTGCAGTGCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIELGGWW*PVQCCG Trigger: CCCACAGCACTGCACTGGCCACCACCAACCTCCAAG...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | GGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGGTCTCACTTGGAGGTTaGTGGTGGCCAGTGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: GLNYVPVLEDTKTPAPTLVSLGG*WWPVQC Trigger: GCACTGCACTGGCCACCACCAACCTCCAAGTGAGAC...CAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGCTAGGGTCCGGGGGCTTTTATGAGGGATTCTaGAATGTTGGAGGGCTAATT | + |
Preference number: 2 (lower is better) Translates to: SIRTAITVWDRPGLGSGGFYEGF*NVGGLI Trigger: AATTAGCCCTCCAACATTCCAGAATCCCTCATAAAA...GCCCCCGGACCCTAGCCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGACCTGGCCCACTCTCTaGTTGCTCATCTCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIETWPTL*LLISTG Trigger: CCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGT...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGCTTGCTCATCTCCACTaGGCCCTAGAAGCCTGGAGT | + |
Preference number: 2 (lower is better) Translates to: GILECWRANSNSSYGLDWLAHLH*ALEAWS Trigger: ACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAG...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGACAAATCTTGGAGGTTGGTGGTaGCCAGTGCAGTGCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: NYVPVLEDTKTPAPTLTNLGGWW*PVQCCG Trigger: CCCACAGCACTGCACTGGCCACCACCAACCTCCAAG...ATTTGTCAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGCTGTGCTCTGGGAGCTaGAAGGCAGAAAGCGACCCA | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIELCSGS*KAESDP Trigger: TGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAG...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | CATGCTGTCCTAACTAGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACT | + |
Preference number: 2 (lower is better) Translates to: HAVLTSIRTAITVWDRPGGVFRI*PRIRTT Trigger: AGTAGTCCTTATTCTGGGTCATATCCTGAAGACACC...CCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCTAGTTAGGACAGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | AGTAAGACTAGGAAGCTCCCAAGATCTGTCAGAGCAAGGCCTCTGTCCATCCCCAAGGAGCGGGTAAGGTaGACACCAGACTTCTTTCTC | + |
Preference number: 2 (lower is better) Translates to: SKTRKLPRSVRARPLSIPKERVR*TPDFFL Trigger: GAGAAAGAAGTCTGGTGTCCACCTTACCCGCTCCTT...GGGGATGGACAGAGGCCTTGCTCTGACAGATCTTGGGAGCTTCCTAGTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR-3UTR CCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGAGCTCCTGGCTTTCCTaGCCAGGGCTAATTGCCCTG | + |
Preference number: 2 (lower is better) Translates to: QLTLALNMEKPGPYGPMLSSWLS*PGLIAL Trigger: CAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCT...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | TCCCACTCAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAACCTGGAGTTTGGCACTaGCTCCTCTTGCCAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: SHSAKSGVKLCPSPRGYKPGVWH*LLLPAP Trigger: AGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGG...TTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTGAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGAAAGCCAGGGCCTTATaGTCCCATGCTGTCCTAACT | + |
Preference number: 2 (lower is better) Translates to: VLRMYSHRHVAAHIGHIEKARAL*SHAVLT Trigger: AGTTAGGACAGCATGGGACCATAAGGCCCTGGCTTT...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CAA 90 bp | CGTGGCAGCTCACATTGGTCACATAGAGACACATGGCAGCTTACATaGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTG | + |
Preference number: 2 (lower is better) Translates to: RGSSHWSHRDTWQLT*ALNMEKPGPYGPML Trigger: CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTGCCATGTGTCTCTATGTGACCAATGTGAGCTGCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACT | + |
Preference number: 2 (lower is better) Translates to: GILECWRANSNSSYGLDWGVFRI*PRIRTT Trigger: AGTAGTCCTTATTCTGGGTCATATCCTGAAGACACC...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTACCTGGCCCACTCTCTaGTTGCTCATCTCCACTGGG | + |
Preference number: 2 (lower is better) Translates to: VYFYEGFWNVGGLILTPPTWPTL*LLISTG Trigger: CCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGT...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGTGGTGGCCAGTGCAGTaGTGTGGGCAGAGGTCTGAC | + |
Preference number: 2 (lower is better) Translates to: YFYEGFWNVGGLILTPPMWWPVQ*CGQRSD Trigger: GTCAGACCTCTGCCCACAGCACTGCACTGGCCACCA...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCCTTGCTCATCTCCACTaGGCCCTAGAAGCCTGGAGT | + |
Preference number: 2 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGLAHLH*ALEAWS Trigger: ACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAG...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR GCA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCCCACAATCCACGGCTTaGGTGGAAAATGGGGAACAC | + |
Preference number: 2 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGPQSTA*VENGEH Trigger: GTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGG...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCAGGACTACTGTGCTCTaGGAGCTGGAAGGCAGAAAG | + |
Preference number: 2 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGRTTVL*ELEGRK Trigger: CTTTCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCT...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGGCACAAGTCTCACTTaGAGGTTGGTGGTGGCCAGT | + |
Preference number: 2 (lower is better) Translates to: YFYEGFWNVGGLILTPPMGTSLT*RLVVAS Trigger: ACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAAACCCTGACAAATGCTaGGAAAGAGGGAAAGCATTA | + |
Preference number: 2 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPNPDKC*ERGKAL Trigger: TAATGCTTTCCCTCTTTCTCAGCATTTGTCAGGGTT...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACT | + |
Preference number: 2 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGGVFRI*PRIRTT Trigger: AGTAGTCCTTATTCTGGGTCATATCCTGAAGACACC...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR TCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACT | + |
Preference number: 2 (lower is better) Translates to: VYFYEGFWNVGGLILTPPGVFRI*PRIRTT Trigger: AGTAGTCCTTATTCTGGGTCATATCCTGAAGACACC...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | GGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCTGGCACTGGCTCCTCTaGCCAGCTCCTGGCTTTCCT | + |
Preference number: 3 (lower is better) Translates to: GRHKSHLEVGGGQCSAVGWHWLL*PAPGFP Trigger: AGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCA...GCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | CCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTGTGGCACTGGCTCCTCTaGCCAGCTCCTGGCTTTCCT | + |
Preference number: 3 (lower is better) Translates to: PLGPRSLEFGTGSSCQLLWHWLL*PAPGFP Trigger: AGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCA...CAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | GCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTaGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGT | + |
Preference number: 3 (lower is better) Translates to: AWSLALAPLASS*LSWPGLIALGC Trigger: ACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR GCA 72 bp | CAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTaGTGTGGGCAGAGGTCTGACCTGGCCCACTCTCTG | + |
Preference number: 3 (lower is better) Translates to: QVSLGGWWWPVQ*CGQRSDLAHSL Trigger: CAGAGAGTGGGCCAGGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | GGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTaGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCA | + |
Preference number: 3 (lower is better) Translates to: GLSPQQAGTSLT*RLVVASAVLWA Trigger: TGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | TCTCTGCTTGCTCATCTCCACTGGGCCCTAGAAGCCTaGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTGG | + |
Preference number: 3 (lower is better) Translates to: SLLAHLHWALEA*SLALAPLASSW Trigger: CCAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | TCTGACCTGGCCCACTCTCTGCTTGCTCATCTCCACTaGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCT | + |
Preference number: 3 (lower is better) Translates to: SDLAHSLLAHLH*ALEAWSLALAP Trigger: AGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCAGGTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACAGTCTCACTTGGAGGTaGGTGGTGGCCAGTGCAGTG | + |
Preference number: 3 (lower is better) Translates to: WLASRVLRMYSHRHVAAHSLTWR*VVASAV Trigger: CACTGCACTGGCCACCACCAACCTCCAAGTGAGACT...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGATGGCACTGGCTCCTCTaGCCAGCTCCTGGCTTTCCT | + |
Preference number: 3 (lower is better) Translates to: NQKVVASVHNRQAQVSLGWHWLL*PAPGFP Trigger: AGGAAAGCCAGGAGCTGGCAAGAGGAGCCAGTGCCA...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR GCA 72 bp | TCTTGCCAGCTCCTGGCTTTCCTGGCCAGGGCTAATTaGCCTGGGGTGTCCAGGTCCAGGGTGGAATTAAGA | + |
Preference number: 3 (lower is better) Translates to: SCQLLAFLARAN*PGVSRSRVELR Trigger: TCTTAATTCCACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | CAAGATCTGTCAGAGCAAGGCCTCTGTCCATCCCCCTaGACAGACTCTGGCACAAGGAGACAGTTGCTAAGC | + |
Preference number: 3 (lower is better) Translates to: QDLSEQGLCPSP*TDSGTRRQLLS Trigger: GCTTAGCAACTGTCTCCTTGTGCCAGAGTCTGTCCAGGGGGATGGACAGAGGCCTTGCTCTGACAGATCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR-3UTR CAA 90 bp | GGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGCTAGAAGCCTGGAGTTaGGCACTGGCTCCTCTTGCC | + |
Preference number: 3 (lower is better) Translates to: GLNYVPVLEDTKTPAPTLLEAWS*ALAPLA Trigger: GGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAG...CAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCATGGCCCACTCTCTGCTaGCTCATCTCCACTGGGCCC | + |
Preference number: 3 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPWPTLC*LISTGP Trigger: GGGCCCAGTGGAGATGAGCAAGCAGAGAGTGGGCCA...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR GCA 72 bp | ACCCCCACCAGGCACACACAGGGAAGGGTGGATTATTaGTGGGCATGTGTCTACTTTTATGAGGGATTCTGG | + |
Preference number: 3 (lower is better) Translates to: TPTRHTQGRVDY*WACVYFYEGFW Trigger: CCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAATCCACCCTTCCCTGTGTGTGCCTGGTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGAGTCTCACTTGGAGGTaGGTGGTGGCCAGTGCAGTG | + |
Preference number: 3 (lower is better) Translates to: QLTLALNMEKPGPYGPMLSLTWR*VVASAV Trigger: CACTGCACTGGCCACCACCAACCTCCAAGTGAGACT...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR-3UTR CAA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCAGTCTCACTTGGAGGTaGGTGGTGGCCAGTGCAGTG | + |
Preference number: 3 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGSLTWR*VVASAV Trigger: CACTGCACTGGCCACCACCAACCTCCAAGTGAGACT...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR TCA 72 bp | GGATACAAAGACCCCAGCTCCAACCCTGACAAATGCTaGGAAAGAGGGAAAGCATTAGGCAACCAGAAGGTG | + |
Preference number: 3 (lower is better) Translates to: GYKDPSSNPDKC*ERGKALGNQKV Trigger: CACCTTCTGGTTGCCTAATGCTTTCCCTCTTTCTCAGCATTTGTCAGGGTTGGAGCTGGGGTCTTTGTATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR TCA 72 bp | GACTGGGGCATTTCTGAAAAAGGTGTCTTCAGGATATaGCCCAGAATAAGGACTACTGTGCTCTGGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: DWGISEKGVFRI*PRIRTTVLWEL Trigger: CAGCTCCCAGAGCACAGTAGTCCTTATTCTGGGTCATATCCTGAAGACACCTTTTTCAGAAATGCCCCAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CCA 72 bp | ACACGTGGCAGCTCACATTGGTCACATAGAGACACATaGCAGCTTACATTGGCTTTAAATATGGAAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: TRGSSHWSHRDT*QLTLALNMEKP Trigger: TGGCTTTTCCATATTTAAAGCCAATGTAAGCTGCCATGTGTCTCTATGTGACCAATGTGAGCTGCCACGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
3UTR CCA 72 bp | TATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTaGAATGTTGGAGGGCTAATTCTAACTCCTCCTATG | + |
Preference number: 3 (lower is better) Translates to: YCWACVYFYEGF*NVGGLILTPPM Trigger: CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | CCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGGCCAAAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: PREGCGLPTRGLEQQLGQRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...TTGGCCGAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
||
CDS-3UTR GCA 90 bp | CTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: LLAFLARANCPGVSRSRVPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...CACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | AGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGCTAGGGTCCGGGGGCCGAAGCTCCTCACACTaGCTGATATGGGGGAACTGC | + |
Preference number: 4 (lower is better) Translates to: SIRTAITVWDRPGLGSGGRSSSH*LIWGNC Trigger: GCAGTTCCCCCATATCAGCCAGTGTGAGGAGCTTCG...GCCCCCGGACCCTAGCCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | GTTCTGCCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VLPREGCGLPTRGLEQQLVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...GAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGGCAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR TCA 90 bp | CCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTGTGCTGGAAGGGCGACTaGCCTGCGATCATCTCGTAC | + |
Preference number: 4 (lower is better) Translates to: PLGPRSLEFGTGSSCQLLCWKGD*PAIISY Trigger: GTACGAGATGATCGCAGGTCAGTCGCCCTTCCAGCA...CAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR GCA 90 bp | GGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: GRHKSHLEVGGGQCSAVGPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...GCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | CTGCCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGGCCGAAGCTCCTCACACTaGCTGATATGGGGGAACTGC | + |
Preference number: 4 (lower is better) Translates to: LPREGCGLPTRGLEQQLGRSSSH*LIWGNC Trigger: GCAGTTCCCCCATATCAGCCAGTGTGAGGAGCTTCG...GCCGAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
||
CDS-3UTR CCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: WLASRVLRMYSHRHVAAHVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VHNRQAQVSLGGWWWPVQVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...CTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CAA 72 bp | TGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTaGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: WPQSTTGRHKSH*EVGGGQCSAVG Trigger: GCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR TCA 90 bp | GGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGGCCAAATACGGGTCCCACCAGTCAGGACTaGACGTGTAGCGCTCATTCC | + |
Preference number: 4 (lower is better) Translates to: GLWASHERLRAAARPNTGPTSQD*TCSAHS Trigger: GGAATGAGCGCTACACGTTCAGTCCTGACTGGTGGG...ACCCGTATTTGGCCGAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR TCA 90 bp | GCCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGCCCACCAGTCAGGACTaGACGTGTAGCGCTCATTCC | + |
Preference number: 4 (lower is better) Translates to: AQALSNSARPVAEERRTLPTSQD*TCSAHS Trigger: GGAATGAGCGCTACACGTTCAGTCCTGACTGGTGGG...CAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGTGCTGGAAGGGCGACTaGCCTGCGATCATCTCGTAC | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWCWKGD*PAIISY Trigger: GTACGAGATGATCGCAGGTCAGTCGCCCTTCCAGCA...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGGTCTTGCTCTTGCCTTTaGGATTCCCGCCACCACCTT | + |
Preference number: 4 (lower is better) Translates to: SWLSWPGLIALGCPGPGWSCSCL*DSRHHL Trigger: AAGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGA...CCACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GCCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: AQALSNSARPVAEERRTLPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...CAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GCCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: AQALSNSARPVAEERRTLITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...CAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | ACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTGGGGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: TPDFFLLHLASASDGLPGVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...CCCAGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | TCTGCTTGCTCATCTCCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: SACSSPLGPRSLEFGTGSVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...GGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | AGCATCAGGACAGCCATCACAGTCTGGGACAGGCCAGGGCTAGGGTCCGGGGGCCCCACAGCAATCCTTTaGCGACTGAAGAGTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: SIRTAITVWDRPGLGSGGPTAIL*RLKSLC Trigger: ACAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGG...GCCCCCGGACCCTAGCCCTGGCCTGTCCCAGACTGTGATGGCTGTCCTGATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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3UTR CAA 72 bp | GGCACAAGGAGACAGTTGCTAAGCAAGGTTAGCAGCTaGAAGGGGTCAGGGTGCAGGGAGGCAAGCGGCAGG | + |
Preference number: 4 (lower is better) Translates to: GTRRQLLSKVSS*KGSGCREASGR Trigger: CCTGCCGCTTGCCTCCCTGCACCCTGACCCCTTCAAGCTGCTAACCTTGCTTAGCAACTGTCTCCTTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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3UTR CAA 72 bp | AAGGCAGACCAAGGCCAGTGTTCTGCCCAGAGAGGGTaGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: KADQGQCSAQRG*WASHERLRAAA Trigger: AGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGGCAGAACACTGGCCTTGGTCTGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR TCA 90 bp | GCCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: AQALSNSARPVAEERRTLSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...CAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: WLASRVLRMYSHRHVAAHPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | CAGTGTTCTGCCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCACCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: QCSAQRGLWASHERLRAAPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...TGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGGCAGAACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR GCA 90 bp | TCTGCTTGCTCATCTCCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: SACSSPLGPRSLEFGTGSTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...GGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: WLASRVLRMYSHRHVAAHTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGCGAAGCTCCTCACACTaGCTGATATGGGGGAACTGC | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWRSSSH*LIWGNC Trigger: GCAGTTCCCCCATATCAGCCAGTGTGAGGAGCTTCG...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: NQKVVASVHNRQAQVSLGRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GTGGACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: VDTRLLSPTSRLCLGWAAITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...GGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | TCTGCTTGCTCATCTCCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: SACSSPLGPRSLEFGTGSITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...GGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGGAGATGAGCAAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CCACTGGGCCCTAGAAGCCTGGAGTTTGGCACTGGCTCCTCTTGCCAGCTCCTGATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: PLGPRSLEFGTGSSCQLLIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...CAGGAGCTGGCAAGAGGAGCCAGTGCCAAACTCCAGGCTTCTAGGGCCCAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | TCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGGAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: SWLSWPGLIALGCPGPGWKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...CCACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GGGAAAGCATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCAGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: GKALGNQKVVASVHNRQAVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...TGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAATGCTTTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | GTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: VHNRQAQVSLGGWWWPVQSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...CTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGTCTTGCTCTTGCCTTTaGGATTCCCGCCACCACCTT | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWSCSCL*DSRHHL Trigger: AAGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGA...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGTCTTGCTCTTGCCTTTaGGATTCCCGCCACCACCTT | + |
Preference number: 4 (lower is better) Translates to: GTSLTWRLVVASAVLWAESCSCL*DSRHHL Trigger: AAGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGA...CTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGGTCTGACCTCTTGCTCTTGCCTTTaGGATTCCCGCCACCACCTT | + |
Preference number: 4 (lower is better) Translates to: SHLEVGGGQCSAVGRGLTSCSCL*DSRHHL Trigger: AAGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGA...GGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCAGGGTGGTTTTTGGTCACTGGTTaGCTTTCCAGCCACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: SWLSWPGLIALGCPGPGWFLVTG*LSSHFH Trigger: GTGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAA...CCACCCTGGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR GCA 90 bp | GGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: GRHKSHLEVGGGQCSAVGIEDST*FRKASL Trigger: CAGGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTAT...GCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR GCA 90 bp | TGGACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: WTPDFFLLHLASASDGLPTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...AGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGTCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: GTSLTWRLVVASAVLWAESEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...CTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTGGGGTCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: HQTSFSYISPLPRMGCLGSEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...CCCCAGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGTCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWSEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | AAGATCTGTCAGAGCAAGGCCTCTGTCCATCCCCCTGGACAGACTCTGGCACAATGCTGGAAGGGCGACTaGCCTGCGATCATCTCGTAC | + |
Preference number: 4 (lower is better) Translates to: KICQSKASVHPPGQTLAQCWKGD*PAIISY Trigger: GTACGAGATGATCGCAGGTCAGTCGCCCTTCCAGCA...TTGTGCCAGAGTCTGTCCAGGGGGATGGACAGAGGCCTTGCTCTGACAGATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR TCA 90 bp | TGGACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: WTPDFFLLHLASASDGLPSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...AGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: WLASRVLRMYSHRHVAAHIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTGGGGAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: HQTSFSYISPLPRMGCLGKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...CCCCAGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAATGCTGGAAGGGCGACTaGCCTGCGATCATCTCGTAC | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQCWKGD*PAIISY Trigger: GTACGAGATGATCGCAGGTCAGTCGCCCTTCCAGCA...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | GGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGAGCAATCTTGGCGACTaGAGAGTCTCTGTAGCAATC | + |
Preference number: 4 (lower is better) Translates to: GTSLTWRLVVASAVLWAESNLGD*RVSVAI Trigger: GATTGCTACAGAGACTCTTCAGTCGCCAAGATTGCT...CTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GCCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGTTTTTGGTCACTGGTTaGCTTTCCAGCCACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: AQALSNSARPVAEERRTLFLVTG*LSSHFH Trigger: GTGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAA...CAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GGGAAAGCATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCATCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: GKALGNQKVVASVHNRQASEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...TGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAATGCTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | AGGACTACTGTGCTCTGGGAGCTGGAAGGCAGAAAGCGACCCATCTCGGGCAGTAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: RTTVLWELEGRKRPISGSKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...ACTGCCCGAGATGGGTCGCTTTCTGCCTTCCAGCTCCCAGAGCACAGTAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | CCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATCCCACCAGTCAGGACTaGACGTGTAGCGCTCATTCC | + |
Preference number: 4 (lower is better) Translates to: PCAQNVFAQTRGSSHWSHPTSQD*TCSAHS Trigger: GGAATGAGCGCTACACGTTCAGTCCTGACTGGTGGG...ATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGTGCTGGAAGGGCGACTaGCCTGCGATCATCTCGTAC | + |
Preference number: 4 (lower is better) Translates to: GILECWRANSNSSYGLDWCWKGD*PAIISY Trigger: GTACGAGATGATCGCAGGTCAGTCGCCCTTCCAGCA...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACTTTTTGGTCACTGGTTaGCTTTCCAGCCACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: WLASRVLRMYSHRHVAAHFLVTG*LSSHFH Trigger: GTGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAA...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GGGAAAGCATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCAATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: GKALGNQKVVASVHNRQAIEDST*FRKASL Trigger: CAGGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTAT...TGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAATGCTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR GCA 90 bp | TGGACACCAGACTTCTTTCTCCTACATCTCGCCTCTGCCTCGGATGGGCTGCCTATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: WTPDFFLLHLASASDGLPIEDST*FRKASL Trigger: CAGGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTAT...AGGCAGCCCATCCGAGGCAGAGGCGAGATGTAGGAGAAAGAAGTCTGGTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR GCA 90 bp | CCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: PCAQNVFAQTRGSSHWSHTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...ATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GCAAGCGGCAGGGAAGGAGCGGGTAAGGTGGACACCAGACTTCTTTCTCCTACATTTTTGGTCACTGGTTaGCTTTCCAGCCACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: ASGREGAGKVDTRLLSPTFLVTG*LSSHFH Trigger: GTGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAA...TGTAGGAGAAAGAAGTCTGGTGTCCACCTTACCCGCTCCTTCCCTGCCGCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | GGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGCGAAGCTCCTCACACTaGCTGATATGGGGGAACTGC | + |
Preference number: 4 (lower is better) Translates to: GLNYVPVLEDTKTPAPTLRSSSH*LIWGNC Trigger: GCAGTTCCCCCATATCAGCCAGTGTGAGGAGCTTCG...CAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | TCCCACTCAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: SHSAKSGVKLCPSPRGYKRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...TTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTGAGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGACAATCCTTTGGCGACTaGAGAGTCTCTGTAGCAATC | + |
Preference number: 4 (lower is better) Translates to: NQKVVASVHNRQAQVSLGQSFGD*RVSVAI Trigger: GATTGCTACAGAGACTCTTCAGTCGCCAAAGGATTG...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR GCA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCACCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCC | + |
Preference number: 4 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPPGRGL*RVPALA Trigger: GGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGG...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQIEDST*FRKASL Trigger: CAGGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTAT...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGGTAGCAATCCCTTCTTaGGGGGTGCAGTGGGCTGGC | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLVAIPS*GVQWAG Trigger: GCCAGCCCACTGCACCCCCCAAGAAGGGATTGCTAC...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGCCCACCAGTCAGGACTaGACGTGTAGCGCTCATTCC | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLPTSQD*TCSAHS Trigger: GGAATGAGCGCTACACGTTCAGTCCTGACTGGTGGG...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAAGCAATCTTGGCGACTaGAGAGTCTCTGTAGCAATC | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQSNLGD*RVSVAI Trigger: GATTGCTACAGAGACTCTTCAGTCGCCAAGATTGCT...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224118.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | ACTGAAGTAAGACTAGGAAGCTCCCAAGATCTGTCAGAGCAAGGCCTCTGTCCATCTTGCTCTTGCCTTTaGGATTCCCGCCACCACCTT | + |
Preference number: 4 (lower is better) Translates to: TEVRLGSSQDLSEQGLCPSCSCL*DSRHHL Trigger: AAGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGA...TGGACAGAGGCCTTGCTCTGACAGATCTTGGGAGCTTCCTAGTCTTACTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR GCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGACAATGCGTTCCCGGTaGAGGTCTTCCAGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLTMRSR*RSSRPQ Trigger: CTGTGGCCTGGAAGACCTGCACCGGGAACGCATTGT...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGGTACATCTTGCCTGTTaGCCGCACCTCCCCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLVHLAC*PHLPKA Trigger: GGCTTTGGGGAGGTGCGGGCAACAGGCAAGATGTAC...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224995.2 |
||
CDS-3UTR CCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTGTGCTCAGGTACTCGTaGGTCAGCCGGGTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VYFYEGFWNVGGLILTPPVLRYS*VSRVSS Trigger: GGAGCTGACCCGGCTGACCCACGAGTACCTGAGCAC...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | ACTGAAGTAAGACTAGGAAGCTCCCAAGATCTGTCAGAGCAAGGCCTCTGTCCAATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: TEVRLGSSQDLSEQGLCPIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...TGGACAGAGGCCTTGCTCTGACAGATCTTGGGAGCTTCCTAGTCTTACTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CCA 90 bp | GGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: GLNYVPVLEDTKTPAPTLKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...CAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAATTCCCACAGCAATCTTaGCGACTGAAGAGTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQFPQQS*RLKSLC Trigger: ACAGAGACTCTTCAGTCGCCAAGATTGCTGTGGGAA...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224118.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | CAGCTTACATTGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGTCCCATGCTGTCCTTGCTAAGAAGCTaGGAACAGAGTGAGCGCGCC | + |
Preference number: 4 (lower is better) Translates to: QLTLALNMEKPGPYGPMLSLLRS*EQSERA Trigger: GGCGCGCTCACTCTGTTCTCAGCTTCTTAGCAAGGA...CAGCATGGGACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR GCA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTGCATGCGTACATCTTaGCTGTTGCCCGCACCTCCC | + |
Preference number: 4 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGCMRTS*LLPAPP Trigger: GGGAGGTGCGGGCAACAGGCAAGATGTACGCATGCA...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224995.2 |
||
CDS-3UTR CCA 90 bp | TCCCACTCAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAACGAAGCTCCTCACACTaGCTGATATGGGGGAACTGC | + |
Preference number: 4 (lower is better) Translates to: SHSAKSGVKLCPSPRGYKRSSSH*LIWGNC Trigger: GCAGTTCCCCCATATCAGCCAGTGTGAGGAGCTTCG...TTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTGAGTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
||
CDS-3UTR CCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGAGGCGCCCAATGGGCTaGCGCTCACATAGGCTGTGG | + |
Preference number: 4 (lower is better) Translates to: YFYEGFWNVGGLILTPPMRRPMG*RSHRLW Trigger: CCACAGCCTATGTGAGCGCCAGCCCATTGGGCGCCT...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCATCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPSEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR GCA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPIEDST*FRKASL Trigger: CAGGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTAT...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATAACAGGCGCCCAATaGGCTGGCGCTCACATAGGC | + |
Preference number: 4 (lower is better) Translates to: VYFYEGFWNVGGLILTPPITGAQ*AGAHIG Trigger: GCCTATGTGAGCGCCAGCCCATTGGGCGCCTGTTAT...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | TCCCACTCAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAATCCGAGATCCGAATGTaGCCATGGTCATCCAGAAGG | + |
Preference number: 4 (lower is better) Translates to: SHSAKSGVKLCPSPRGYKSEIRM*PWSSRR Trigger: CCTTCTGGATGACCATGGCCACATTCGGATCTCGGA...TTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTGAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATAGAGTTCCCACAGCAATCTTaGCGACTGAAGAGTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: VLRMYSHRHVAAHIGHIEFPQQS*RLKSLC Trigger: ACAGAGACTCTTCAGTCGCCAAGATTGCTGTGGGAA...CTCTATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGCCCACCAGTCAGGACTaGACGTGTAGCGCTCATTCC | + |
Preference number: 4 (lower is better) Translates to: YFYEGFWNVGGLILTPPMPTSQD*TCSAHS Trigger: GGAATGAGCGCTACACGTTCAGTCCTGACTGGTGGG...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR TCA 90 bp | AACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGACAAATCAATCCTTTGGCGACTaGAGAGTCTCTGTAGCAATC | + |
Preference number: 4 (lower is better) Translates to: NYVPVLEDTKTPAPTLTNQSFGD*RVSVAI Trigger: GATTGCTACAGAGACTCTTCAGTCGCCAAAGGATTG...ATTTGTCAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR TCA 90 bp | TCCCACTCAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAACAATCCTTTGGCGACTaGAGAGTCTCTGTAGCAATC | + |
Preference number: 4 (lower is better) Translates to: SHSAKSGVKLCPSPRGYKQSFGD*RVSVAI Trigger: GATTGCTACAGAGACTCTTCAGTCGCCAAAGGATTG...TTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTGAGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGATTCCTCACCACCTCTaGAGCCATGTAGCCCACAGT | + |
Preference number: 4 (lower is better) Translates to: YFYEGFWNVGGLILTPPMIPHHL*SHVAHS Trigger: ACTGTGGGCTACATGGCTCCAGAGGTGGTGAGGAAT...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTAAGACATTGAGTTCCTaGAAGCACTCGGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: VYFYEGFWNVGGLILTPPKTLSS*KHSVST Trigger: GGTGGAGACCGAGTGCTTCCAGGAACTCAATGTCTT...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CCA 90 bp | GTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTCCCACAGCAATCCTTTaGCGACTGAAGAGTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: VYFYEGFWNVGGLILTPPPTAIL*RLKSLC Trigger: ACAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGG...AGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGCCCACAGCAATCCTTTaGCGACTGAAGAGTCTCTGT | + |
Preference number: 4 (lower is better) Translates to: YFYEGFWNVGGLILTPPMPTAIL*RLKSLC Trigger: ACAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGG...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR GCA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGTTTTTGGTCACTGGTTaGCTTTCCAGCCACTTCCAC | + |
Preference number: 4 (lower is better) Translates to: YFYEGFWNVGGLILTPPMFLVTG*LSSHFH Trigger: GTGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAA...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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3UTR CAA 72 bp | TCACATTGGTCACATAGAGACACATGGCAGCTTACATaGGCTTTAAATATGGAAAAGCCAGGGCCTTATGGT | + |
Preference number: 4 (lower is better) Translates to: SHWSHRDTWQLT*ALNMEKPGPYG Trigger: ACCATAAGGCCCTGGCTTTTCCATATTTAAAGCCAATGTAAGCTGCCATGTGTCTCTATGTGACCAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS GCA 90 bp | TCAGGTACTCGTGGGTCAGCCGGGTCAGCTCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCCGCTGGGCACAGTTACTCACCAGCT | + |
Preference number: 5 (lower is better) Translates to: SGTRGSAGSAPGRGL*RVPALAAGHSYSPA Trigger: AGCTGGTGAGTAACTGTGCCCAGCGGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGAGCTGACCCGGCTGACCCACGAGTACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001115.16 ENSMUST00000099482.5 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | CCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGGCCAATCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: PREGCGLPTRGLEQQLGQSWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...TTGGCCGAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CAA 90 bp | TCGGATGGGCTGCCTGGGGCTCCCCACAGTCAGGCAGCAAGGCCAACCCATGGGGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: SDGLPGAPHSQAARPTHGVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...CCCATGGGTTGGCCTTGCTGCCTGACTGTGGGGAGCCCCAGGCAGCCCATCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CAA 90 bp | CCCAGGCCTTGTCAAACTCAGCTAGGCCAGTGGCTGAGGAACGGAGGACACTGGTCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: PRPCQTQLGQWLRNGGHWSWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...CCAGTGTCCTCCGTTCCTCAGCCACTGGCCTAGCTGAGTTTGACAAGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | TGCCAGCTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCTCCCACAGCAATCCTTaGGCGACTGAAGAGTCTCTG | + |
Preference number: 5 (lower is better) Translates to: CQLLAFLARANCPGVSRSSHSNP*ATEESL Trigger: CAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGGA...GGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CAA 90 bp | GTTCTGCCCAGAGAGGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCTTCTTGCTCTTGCCTTaGCGATTCCCGCCACCACCT | + |
Preference number: 5 (lower is better) Translates to: VLPREGCGLPTRGLEQQLFLLLP*RFPPPP Trigger: AGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGAA...GAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCCTCTCTGGGCAGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CAA 90 bp | GGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGTTCTTGCTCTTGCCTTaGCGATTCCCGCCACCACCT | + |
Preference number: 5 (lower is better) Translates to: GTSLTWRLVVASAVLWAEFLLLP*RFPPPP Trigger: AGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGAA...CTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | TGCCAGCTCCTGGCTTTCCTGGCCAGGGCTAATTGCCCTGGGGTGTCCAGGTCCGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: CQLLAFLARANCPGVSRSVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...GGACCTGGACACCCCAGGGCAATTAGCCCTGGCCAGGAAAGCCAGGAGCTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | CCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTTCTTGCTCTTGCCTTaGCGATTCCCGCCACCACCT | + |
Preference number: 5 (lower is better) Translates to: PQSTTGRHKSHLEVGGGQFLLLP*RFPPPP Trigger: AGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGAA...CTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GGGAAAGCATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCATCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: GKALGNQKVVASVHNRQASWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...TGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAATGCTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GTCCACAACAGGCAGGCACAAGTCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTCCCACAGCAATCCTTaGGCGACTGAAGAGTCTCTG | + |
Preference number: 5 (lower is better) Translates to: VHNRQAQVSLGGWWWPVQSHSNP*ATEESL Trigger: CAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGGA...CTGCACTGGCCACCACCAACCTCCAAGTGAGACTTGTGCCTGCCTGTTGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CAA 90 bp | TGGCTGGCCAGCCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: WLASRVLRMYSHRHVAAHVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...GTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGGCTGGCCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAATTCTTGCTCTTGCCTTaGCGATTCCCGCCACCACCT | + |
Preference number: 5 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQFLLLP*RFPPPP Trigger: AGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGAA...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCAGCTCCAACCCTGTCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: GLNYVPVLEDTKTPAPTLSWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...CAGGGTTGGAGCTGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGTCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: GILECWRANSNSSYGLDWSWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | AACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCACTTGGATCCCACAGCAATCCTTaGGCGACTGAAGAGTCTCTG | + |
Preference number: 5 (lower is better) Translates to: NQKVVASVHNRQAQVSLGSHSNP*ATEESL Trigger: CAGAGACTCTTCAGTCGCCAAAGGATTGCTGTGGGA...TCCAAGTGAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 |
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CDS-3UTR CAA 90 bp | CCGTGTGCTCAGAATGTATTCGCACAGACACGTGGCAGCTCACATTGGTCACATTTCTTGCTCTTGCCTTaGCGATTCCCGCCACCACCT | + |
Preference number: 5 (lower is better) Translates to: PCAQNVFAQTRGSSHWSHFLLLP*RFPPPP Trigger: AGGTGGTGGCGGGAATCGCAAAGGCAAGAGCAAGAA...ATGTGACCAATGTGAGCTGCCACGTGTCTGTGCGAATACATTCTGAGCACACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001115.16 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | ATTAGGCAACCAGAAGGTGGTGGCCTCAGTCCACAACAGGCAGGCACAAGTCTCGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: IRQPEGGGLSPQQAGTSLVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...GAGACTTGTGCCTGCCTGTTGTGGACTGAGGCCACCACCTTCTGGTTGCCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GGGTTGTGGGCTTCCCACGAGAGGCTTAGAGCAGCAGCTCGGCCAAATACGGGTTTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCT | + |
Preference number: 5 (lower is better) Translates to: GLWASHERLRAAARPNTGFFSSF*HAYILP Trigger: AGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAA...ACCCGTATTTGGCCGAGCTGCTGCTCTAAGCCTCTCGTGGGAAGCCCACAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099482.5 |
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CDS-3UTR CAA 90 bp | TCTCACTTGGAGGTTGGTGGTGGCCAGTGCAGTGCTGTGGGCAGAGGTCTGACCTTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCT | + |
Preference number: 5 (lower is better) Translates to: SHLEVGGGQCSAVGRGLTFFSSF*HAYILP Trigger: AGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAA...GGTCAGACCTCTGCCCACAGCACTGCACTGGCCACCACCAACCTCCAAGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAAGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GCTGTGTTCCACAATCCACGGCTTGCGTGGAAAATGGGGAACACCACTGTGCAATTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCT | + |
Preference number: 5 (lower is better) Translates to: AVFHNPRLAWKMGNTTVQFFSSF*HAYILP Trigger: AGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAA...TTGCACAGTGGTGTTCCCCATTTTCCACGCAAGCCGTGGATTGTGGAACACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000001115.16 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | TACTTTTATGAGGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGTCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: YFYEGFWNVGGLILTPPMSWKRS*QGPCSS Trigger: GCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGA...CATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCCTCATAAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | GGGATTCTGGAATGTTGGAGGGCTAATTCTAACTCCTCCTATGGCCTGGACTGGTTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCT | + |
Preference number: 5 (lower is better) Translates to: GILECWRANSNSSYGLDWFFSSF*HAYILP Trigger: AGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAA...CCAGTCCAGGCCATAGGAGGAGTTAGAATTAGCCCTCCAACATTCCAGAATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | ATTATTGCTGGGCATGTGTCTACTTTTATGAGGGATTCTGGAATGTTGGAGGGCGTTTTTGGTCACTGGTaGCCTTTCCAGCCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: IIAGHVSTFMRDSGMLEGVFGHW*PFQPLP Trigger: TGGAAGTGGCTGGAAAGGCAACCAGTGACCAAAAAC...GCCCTCCAACATTCCAGAATCCCTCATAAAAGTAGACACATGCCCAGCAATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS-3UTR CAA 90 bp | CAGCTAAGTCTGGGGTTAAACTATGTCCCAGTCCTAGAGGATACAAAGACCCCATTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCT | + |
Preference number: 5 (lower is better) Translates to: QLSLGLNYVPVLEDTKTPFFSSF*HAYILP Trigger: AGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAA...TGGGGTCTTTGTATCCTCTAGGACTGGGACATAGTTTAACCCCAGACTTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000001115.16 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS GCA 72 bp | CGTGGGTCAGCCGGGTCAGCTCCTGGAAGAGGTCTTTaGAGGGTCCCTGCTCTAGCCGCTGGGCACAGTTAC | + |
Preference number: 6 (lower is better) Translates to: RGSAGSAPGRGL*RVPALAAGHSY Trigger: GTAACTGTGCCCAGCGGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGAGCTGACCCGGCTGACCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001115.16 ENSMUST00000099482.5 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS CAA 90 bp | CTCAGGTACTCGTGGGTCAGCCGGGTCAGCTCCTGGAAGAGGTCTTaGCAGGGTCCCTGCTCTAGCCGCTGGGCACAGTTACTCACCAGC | + |
Preference number: 6 (lower is better) Translates to: LRYSWVSRVSSWKRS*QGPCSSRWAQLLTS Trigger: GCTGGTGAGTAACTGTGCCCAGCGGCTAGAGCAGGGACCCTGCAAAGACCTCTTCCAGGAGCTGACCCGGCTGACCCACGAGTACCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001115.16 ENSMUST00000099482.5 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS GCA 72 bp | CCCAGCCGCTTGAAATTCAGTTTCTTGAAAAGGGGGTaGTCCTTTACCTCACGGGCGCCACCTCCACGACAC | + |
Preference number: 6 (lower is better) Translates to: PSRLKFSFLKRG*SFTSRAPPPRH Trigger: GTGTCGTGGAGGTGGCGCCCGTGAGGTAAAGGAGCACCCCCTTTTCAAGAAACTGAATTTCAAGCGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000001115.16 ENSMUST00000099482.5 ENSMUST00000224118.2 ENSMUST00000224653.2 ENSMUST00000224995.2 ENSMUST00000225925.2 |
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CDS GCA 72 bp | GCCACAGCAGATCTCAGCAGCATAGAAGACAGCACGTaGTTCAGGAAAGCCAGCTACAAACCTACTGTTCAC | + |
Preference number: 6 (lower is better) Translates to: ATADLSSIEDST*FRKASYKPTVH Trigger: GTGAACAGTAGGTTTGTAGCTGGCTTTCCTGAAGCACGTGCTGTCTTCTATGCTGCTGAGATCTGCTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225925.2 |
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CDS CAA 72 bp | CCCTTTCGCTTCTTTATCCGCTTCTTTTCCAGTTTCTaGCATGCGTACATCTTGCCTGTTGCCCGCACCTCC | + |
Preference number: 6 (lower is better) Translates to: PFRFFIRFFSSF*HAYILPVARTS Trigger: GGAGGTGCGGGCAACAGGCAAGATGTACGCATGCAAGAAACTGGAAAAGAAGCGGATAAAGAAGCGAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224995.2 |