Pregenerated sensors for GRK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003228Ensembl transcript IDs: ENSMUST00000003313.10, ENSMUST00000236876.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACCAGCCTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATaGCTTTATACTTCACTGGTGCCTAGGCTTGTTCTTAGGCATCCC | + |
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Preference number: 1 (lower is better) Translates to: RTSLWPTSPGEVTMR*LYTSLVPRLVLRHP Trigger: GGGATGCCTAAGAACAAGCCTAGGCACCAGTGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCTGGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR TCA 90 bp | CTTGATGATCTGGGAGTACTGAGTGTCCTGCTCCCCAGTAGAACCTaGATACGGTCACTTGCATCTGCTTCATGCTCAGCCCAAGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LDDLGVLSVLLPSRT*IRSLASASCSAQEK Trigger: CTTTTCTTGGGCTGAGCATGAAGCAGATGCAAGTGACCGTATTCAGGTTCTACTGGGGAGCAGGACACTCAGTACTCCCAGATCATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | CATCAGAAACATCAAGGGTCAGTAACTATGAGGCATGCTTGTTACTaGAGCTACCTGCCTGTATCTGTGTGGCAAGCCTCTTGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HQKHQGSVTMRHACY*SYLPVSVWQASCWL Trigger: CAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCTCCAGTAACAAGCATGCCTCATAGTTACTGACCCTTGATGTTTCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR GCA 90 bp | AGTCATACTCAGAGCTTCAGCTTCCCAGGGAGCAGTAAGACTAGCTaGTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SHTQSFSFPGSSKTS*SPCPGGKERSNVFF Trigger: AAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGCTAGTCTTACTGCTCCCTGGGAAGCTGAAGCTCTGAGTATGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | TTTCCTGGTGAGACTTTCTTCATGTCACAGAAGCCAACAAATAAGTaGAGTCACATGAAGGTTCATGATCTGGTGACCAGTTTGCTGACC | + |
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Preference number: 1 (lower is better) Translates to: FPGETFFMSQKPTNK*SHMKVHDLVTSLLT Trigger: GGTCAGCAAACTGGTCACCAGATCATGAACCTTCATGTGACTCCACTTATTTGTTGGCTTCTGTGACATGAAGAAAGTCTCACCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | ATAGCCTGGGAGCCAGGCTTGAAGTTAATTTTTCACCATGGAGCCTaGCTGCTCTCTTGGTTAACTGATTTCAGAATGATCATTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: IAWEPGLKLIFHHGA*LLSWLTDFRMIIPK Trigger: TTTGGGAATGATCATTCTGAAATCAGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAAATTAACTTCAAGCCTGGCTCCCAGGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR TCA 90 bp | AGCTTCAATAACTGGGTGGCTGGTTGTATAAATAGGTACAGAAGGTaGTCCAAGGGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: SFNNWVAGCINRYRR*SKGRHINCSLEEEA Trigger: AGCCTCTTCCTCCAAACTACAATTGATATGCCTACCCTTGGATCACCTTCTGTACCTATTTATACAACCAGCCACCCAGTTATTGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | CCAGGCTTGAAGTTAATTTTTCACCATGGAGCCTGGCTGCTCTCTTaGTTAACTGATTTCAGAATGATCATTCCCAAAGGCTCTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: PGLKLIFHHGAWLLS*LTDFRMIIPKGSFL Trigger: TAGAAAAGAGCCTTTGGGAATGATCATTCTGAAATCAGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAAATTAACTTCAAGCCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | CTAGTTAGGATGCTATTAAAATCCGTGCAAGCTGTCATATCCCATTaGGTTTCTATTGCAATGTTCAACAAGGAAAATTCTAGTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: LVRMLLKSVQAVISH*VSIAMFNKENSSPP Trigger: GGGTGGACTAGAATTTTCCTTGTTGAACATTGCAATAGAAACCCAATGGGATATGACAGCTTGCACGGATTTTAATAGCATCCTAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR TCA 90 bp | AATGCCAGTAGCCACAATGCCTTTCTAATGGACAACATTTACTTGTaGTCTATTATAGGATGGTGTGTCATTGAACTGGAAAAATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NASSHNAFLMDNIYL*SIIGWCVIELEKCP Trigger: TGGGCATTTTTCCAGTTCAATGACACACCATCCTATAATAGATCACAAGTAAATGTTGTCCATTAGAAAGGCATTGTGGCTACTGGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR GCA 90 bp | ACCAAGTTTGAGATACTTAGTATAGATACAGTTTCCATGGTAGTATaGACCTGTAACCTTAGAATTCCAGAGGCTGAAGCAGGAAGATAT | + |
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Preference number: 1 (lower is better) Translates to: TKFEILSIDTVSMVV*TCNLRIPEAEAGRY Trigger: ATATCTTCCTGCTTCAGCCTCTGGAATTCTAAGGTTACAGGTGCATACTACCATGGAAACTGTATCTATACTAAGTATCTCAAACTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CCA 90 bp | GGATCCCAATTCACACTTCTCCATAGTTCCATGATTGAGAACACTTaGGTTTTCATGACGCATCATTATCATCAGTACAAACTCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: GSQFTLLHSSMIENT*VFMTHHYHQYKLLK Trigger: TTTTAGGAGTTTGTACTGATGATAATGATGCGTCATGAAAACCCAAGTGTTCTCAATCATGGAACTATGGAGAAGTGTGAATTGGGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATGCCTTTATACTTCAGCCACTGAGCCACAGTaGAAGCTCCCCTGGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: SLWPTSPGEVTMRCLYTSATEPQ*KLPWLQ Trigger: TTGTAGCCAGGGGAGCTTCCACTGTGGCTCAGTGGC...TGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | TTGTTATTGGGGGAACGGTCTCCTATCTTAGTTCCCACTGGAGCTTaGCTGGCCACTGAGCCACAGTGGAAGCTCCCCTGGCTACAAGTT | + |
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Preference number: 2 (lower is better) Translates to: LLLGERSPILVPTGA*LATEPQWKLPWLQV Trigger: AACTTGTAGCCAGGGGAGCTTCCACTGTGGCTCAGTGGCCAGCAAAGCTCCAGTGGGAACTAAGATAGGAGACCGTTCCCCCAATAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAACAACACATCTCAGAGACCTTGCATCTGCTTCATaGTCAGCCCAAGAAAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: CGKPLAGCPSKRTTHLRDLASAS*SAQEKF Trigger: GAACTTTTCTTGGGCTGAGCATGAAGCAGATGCAAG...GTCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | GTGGATGGGGAAGTAAGAAACAAACCTGTAAGGAGGAGGCAGGGATaGTGTGTGGCTGAGGCTGATGACCATCCCAGGAAGACGATAATT | + |
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Preference number: 2 (lower is better) Translates to: VDGEVRNKPVRRRQG*CVAEADDHPRKTII Trigger: AATTATCGTCTTCCTGGGATGGTCATCAGCCTCAGCCACACACAATCCCTGCCTCCTCCTTACAGGTTTGTTTCTTACTTCCCCATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTACTGGAGCTACCTGCCTGTATCTGTGTGGCAAGCCTCTTGCTGGCTGCCGCCTTTATACTTCACTaGTGCCTAGGCTTGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LLLELPACICVASLLLAAAFILH*CLGLFL Trigger: TAAGAACAAGCCTAGGCACCAGTGAAGTATAAAGGC...GGCAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCTCCAGTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTACTGGAGCTACCTGCCTGTATCTGTGTGGCAAGCCTCTTGCTGGCTGCCAACCCTAGTAATTGGTaGCTGAGACAAGTTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLLELPACICVASLLLAANPSNW*LRQVLR Trigger: CCTCAAAACTTGTCTCAGCCACCAATTACTAGGGTT...GGCAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCTCCAGTAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGAGCTTTGCTGGCCACTaGGCCACAGTGGAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLSFAGH*ATVEAP Trigger: GGGAGCTTCCACTGTGGCTCAGTGGCCAGCAAAGCT...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAACAACACATCTCAGAGACGAAGAAAGGCTCTTTTaGAAAGAGCTCAGATACACA | + |
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Preference number: 2 (lower is better) Translates to: CGKPLAGCPSKRTTHLRDEERLF*KELRYT Trigger: TGTGTATCTGAGCTCTTTGCAAAAGAGCCTTTCTTC...GTCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGTCATTGAACTGGAAAAATGCCCAGCATCTTCTTTTAGGGTAAAGGGTCCACTGGAGCTTTGCTaGCCACTGAGCCACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: WCVIELEKCPASSFRVKGPLELC*PLSHSG Trigger: TCCACTGTGGCTCAGTGGCCAGCAAAGCTCCAGTGG...ACCCTTTACCCTAAAAGAAGATGCTGGGCATTTTTCCAGTTCAATGACACACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | CATGCTCAGCCCAAGAAAAGTTCAGAAATAGCCTGGGAGCCAGGCTaGAAGTTAATTTTTCACCATGGAGCCTGGCTGCTCTCTTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: HAQPKKSSEIAWEPG*KLIFHHGAWLLSWL Trigger: TAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAAATTAACTTCAAGCCTGGCTCCCAGGCTATTTCTGAACTTTTCTTGGGCTGAGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | CAGAATGATCATAGCAGAGGCCTATCTCCCAAACAGCAAAAGCAGAGAAGCTTCCCAAGTAGAAGGCTCTaGGCTGGTTCCACTTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: QNDHSRGLSPKQQKQRSFPSRRL*AGSTFD Trigger: GTCAAAAGTGGAACCAGCTCAGAGCCTTCTACTTGG...GAAGCTTCTCTGCTTTTGCTGTTTGGGAGATAGGCCTCTGCTATGATCATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR GCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCGGGAGATGGCCCAAGTaGATTCTGGCATTTCATTCA | + |
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Preference number: 2 (lower is better) Translates to: KTESHDFPYLPQALRHISGRWPK*ILAFHS Trigger: TGAATGAAATGCCAGAATGCACTTGGGCCATCTCCC...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCTTTCACCATGGAGCCTaGCTGCTCTCTTGGTTAACT | + |
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Preference number: 2 (lower is better) Translates to: KTESHDFPYLPQALRHISFHHGA*LLSWLT Trigger: AGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAA...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATCGATCTCTATCCCAATaGTTTAGGATTCCTTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FLISAFFGAGLSYEADSHRSLSQ*FRIPCP Trigger: AGGGCAAGGAATCCTAAATCATTGGGATAGAGATCG...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR GCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGCCCTTGGGGATTCTCTaGTACAATGGACATTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQPLGIL*YNGHCF Trigger: AAAGCAATGTCCATTGTAGCAGAGAATCCCCAAGGG...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGTCATTGAACTGGAAAAATGCCCAGCATCTTCTTTTAGGGTAAAGGGTCAGTGGAAGCTCCCCTaGCTACAAGTTCTGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: WCVIELEKCPASSFRVKGQWKLP*LQVLLP Trigger: TGGAAGCAGAACTTGTAGCCAGGGGAGCTTCCACTG...ACCCTTTACCCTAAAAGAAGATGCTGGGCATTTTTCCAGTTCAATGACACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCCCTTGCCCTATATGCTaGATGCCCTACAGGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLPCPIC*MPYRRR Trigger: CCTCCTCCTGTAGGGCATCCAGCATATAGGGCAAGG...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATACTGGCCCACCTCTCCTaGGGAAGTGACAATGAGATG | + |
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Preference number: 2 (lower is better) Translates to: GRHINCSLEEEALYCLSILAHLS*GSDNEM Trigger: CATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAG...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | ACAGACCTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATaGGGGGAACGGTCTCCTATCTTAGTTCCCACTGGAGCTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TDLSGNFFEKLGGLL*GERSPILVPTGALL Trigger: CAGCAAAGCTCCAGTGGGAACTAAGATAGGAGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAGGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | TTGAATTGGGAGATGGCCCAAGTGCATTCTGGCATTTCATTCAGCTaGTTACAAGTCAACAGGAGAGTGATAGCTACACTGAGGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LNWEMAQVHSGISFS*LQVNRRVIATLRGK Trigger: TTTCCCCCTCAGTGTAGCTATCACTCTCCTGTTGACTTGTAACAAGCTGAATGAAATGCCAGAATGCACTTGGGCCATCTCCCAATTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATAGCCTTGGGAGAGCTTaGAATCAAAGATATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: FLISAFFGAGLSYEADSHSLGRA*NQRYET Trigger: AGTCTCATATCTTTGATTCCAAGCTCTCCCAAGGCT...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGTTAAACAGCCGTGGATaGGGAAGTAAGAAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQLNSRG*GSKKQT Trigger: GGTTTGTTTCTTACTTCCCCATCCACGGCTGTTTAA...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | TGGAAAACAGACCTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTaGTTATTGGGGGAACGGTCTCCTATCTTAGTTCCCACTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: WKTDLSGNFFEKLGG*LLGERSPILVPTGA Trigger: AGCTCCAGTGGGAACTAAGATAGGAGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAGGTCTGTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGAAACATTATCTCTTTTaGGGCTCTGGAAGTCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQKHYLF*GSGSLE Trigger: CTCTAGACTTCCAGAGCCTCAAAAGAGATAATGTTT...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTATCACATGAAGGTTCATaGTCTGGTGACCAGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LAAHPVLVGKRDQMYSLLSHEGS*SGDQFA Trigger: AGCAAACTGGTCACCAGATCATGAACCTTCATGTGA...TAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGGCTCTCTTGGTTAACTaGTTTCAGAATGATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQALLVN*FQNDHS Trigger: GGAATGATCATTCTGAAATCAGTTAACCAAGAGAGC...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTGTCATTGAACTGGAAAAATGCCCAGCATCTTCTTTTAGGGTAAAGGGTCCTGTGACTTTGAGATaGCCAATTAGAACCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: WCVIELEKCPASSFRVKGPVTLR*PIRTSL Trigger: GAGGCTGGTTCTAATTGGGCATCTCAAAGTCACAGG...ACCCTTTACCCTAAAAGAAGATGCTGGGCATTTTTCCAGTTCAATGACACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATACTGCTCACCCTGTCCTaGTGGGAAAGAGAGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRHINCSLEEEALYCLSILLTLS*WEREIK Trigger: TTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAG...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCACAGTATGGAGCAAGTaGACAAGGGGAAGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLTVWSK*TRGSAP Trigger: TGGTGCACTTCCCCTTGTCCACTTGCTCCATACTGT...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATATGATTGAGAACACTTaGGTTTTCATGACGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: FLISAFFGAGLSYEADSHMIENT*VFMTHH Trigger: ATGATGCGTCATGAAAACCCAAGTGTTCTCAATCAT...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGAAGCCAACAAATAAGTaGAGTCACATGAAGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQKPTNK*SHMKVH Trigger: ATGAACCTTCATGTGACTCCACTTATTTGTTGGCTT...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR CAA 90 bp | CCACCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTaGCATTGCTTGCTCTATGTTGAGGGTAGTAGCTCAGTGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: PPFPLSRLRMLSYRK*HCLLYVEGSSSVNL Trigger: CAAATTCACTGAGCTACTACCCTCAACATAGAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTGTGTCATTGAACTGGAAAAATGCCCAGCATCTTCTTTTAGGGTAAAGGGTGTTAAACCATTGTCCTaGGTCAAGACTTTTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WCVIELEKCPASSFRVKGVKPLS*VKTFQR Trigger: CCTCTGAAAAGTCTTGACTCAGGACAATGGTTTAAC...ACCCTTTACCCTAAAAGAAGATGCTGGGCATTTTTCCAGTTCAATGACACACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCAAGTCAGTGGAAATTTGGTGAGAAAAATGCCACCCTCGAAGAAAGGCGCTGTCATATCCCATTaGGTTTCTATTGCAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SFQVSGNLVRKMPPSKKGAVISH*VSIAMF Trigger: GAACATTGCAATAGAAACCCAATGGGATATGACAGC...GCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCGGCCCAAGTGCATTCTaGCATTTCATTCAGCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLGPSAF*HFIQLV Trigger: AACAAGCTGAATGAAATGCCAGAATGCACTTGGGCC...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGGGTAGTCACTCAGGATaGATCCCAATTCACACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLGSHSG*IPIHTS Trigger: AGAAGTGTGAATTGGGATCCATCCTGAGTGACTACC...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 90 bp | AAGTTGCATTGCTTGCTCTATGTTGAGGGTAGTAGCTCAGTGAATTaGATGGAAAGTAGAGCCAGACTTTCAAGAAAGTACAGGGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KLHCLLYVEGSSSVN*MESRARLSRKYRVQ Trigger: TTGAACCCTGTACTTTCTTGAAAGTCTGGCTCTACTTTCCATCAAATTCACTGAGCTACTACCCTCAACATAGAGCAAGCAATGCAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 90 bp | ATGGAACATGTGAGGTTCAGAGCAGCACAACAGAAGCTGTTATCATaGACAATAACCTCCAAGATGGACCCACATTCATTCATTAATGCT | + |
|
Preference number: 2 (lower is better) Translates to: MEHVRFRAAQQKLLS*TITSKMDPHSFINA Trigger: AGCATTAATGAATGAATGTGGGTCCATCTTGGAGGTTATTGTCAATGATAACAGCTTCTGTTGTGCTGCTCTGAACCTCACATGTTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAATCCCATTTTCCTGGTaGGACTTTCTTCATGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: GRHINCSLEEEALYCLSIIPFSW*DFLHVT Trigger: TGTGACATGAAGAAAGTCTCACCAGGAAAATGGGAT...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCTTTATACTTCACTGGTaGCTAGGCTTGTTCTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLFILHW*LGLFLG Trigger: GCCTAAGAACAAGCCTAGGCACCAGTGAAGTATAAA...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR GCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGGATTCCCATCTTACTTaGTCCTCTAATGTAAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLDSHLT*SSNVKM Trigger: CATCTTTACATTAGAGGAGCAAGTAAGATGGGAATC...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAACAACACATCTCAGAGACGAGCTGGTTCCACTTTaGACTTCAAGGCCAGAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: CGKPLAGCPSKRTTHLRDELVPL*TSRPEP Trigger: CGGCTCTGGCCTTGAAGTCAAAAGTGGAACCAGCTC...GTCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | CATGCTTGTTACTGGAGCTACCTGCCTGTATCTGTGTaGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HACYWSYLPVSV*QASCWLPLQEN Trigger: GTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCTCCAGTAACAAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | TCCTATCTTAGTTCCCACTGGAGCTTTGCTGGCCACTaGGCCACAGTGGAAGCTCCCCTGGCTACAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SYLSSHWSFAGH*ATVEAPLATSS Trigger: AGAACTTGTAGCCAGGGGAGCTTCCACTGTGGCTCAGTGGCCAGCAAAGCTCCAGTGGGAACTAAGATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | CTGGGAGTACTGAGTGTCCTGCTCCCCAGTAGAACCTaGATACGGTCACTTGCATCTGCTTCATGCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGVLSVLLPSRT*IRSLASASCSA Trigger: GGCTGAGCATGAAGCAGATGCAAGTGACCGTATTCAGGTTCTACTGGGGAGCAGGACACTCAGTACTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | CCTGTGACTTTGAGATGCCCAATTAGAACCAGCCTCTaGCCCACCTCTCCTGGGGAAGTGACAATGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PVTLRCPIRTSL*PTSPGEVTMRC Trigger: GCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCTGGTTCTAATTGGGCATCTCAAAGTCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | AGCTACCTGCCTGTATCTGTGTGGCAAGCCTCTTGCTaGCTGCCCCTCCAAGAGAACAACACATCTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SYLPVSVWQASC*LPLQENNTSQR Trigger: TCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | CCCTGGCTACAAGTTCTGCTTCCAAGTAGAAGGCTCTaGGCTGGTTCCACTTTTGACTTCAAGGCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWLQVLLPSRRL*AGSTFDFKARA Trigger: GGCTCTGGCCTTGAAGTCAAAAGTGGAACCAGCTCAGAGCCTTCTACTTGGAAGCAGAACTTGTAGCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | CAGAGCTTCAGCTTCCCAGGGAGCAGTAAGACTAGCTaGTCACCCTGTCCTGGTGGGAAAGAGAGATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSFSFPGSSKTS*SPCPGGKERSN Trigger: ATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGCTAGTCTTACTGCTCCCTGGGAAGCTGAAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | CACCACATAGTAGGCTTGGGGTGTAGCCTAGGAGTCTaGATTGTAACAGGGGTTGATTCAGGTAGCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HHIVGLGCSLGV*IVTGVDSGSTC Trigger: GCAGGTGCTACCTGAATCAACCCCTGTTACAATGCAGACTCCTAGGCTACACCCCAAGCCTACTATGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTACTGGAGCTACCTGCCTGTATCTGTGTGGCAAGCCTCTTGCTGGCTGCCGACATTGCTTTGACTTaGAGGCCTAAGGAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLELPACICVASLLLAADIALT*RPKEKL Trigger: CAGTTTCTCCTTAGGCCTCAAAGTCAAAGCAATGTC...GGCAGCCAGCAAGAGGCTTGCCACACAGATACAGGCAGGTAGCTCCAGTAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | CTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATaGCTTTATACTTCACTGGTGCCTAGGCTTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LWPTSPGEVTMR*LYTSLVPRLVL Trigger: AAGAACAAGCCTAGGCACCAGTGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTACCTGAGAAACTTGGAGGTTaGTTATTGGGGGAACGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAHPVLVGKRDQMYSLLPEKLGG*LLGERS Trigger: AGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTC...AGGTAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATTACAGGAGTGATTTTTaGCCTGTGACTTTGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: FLISAFFGAGLSYEADSHYRSDF*PVTLRC Trigger: GCATCTCAAAGTCACAGGCAAAAAATCACTCCTGTA...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCGATCAAATGTATTCTTaGTTACCTCAGGGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KTESHDFPYLPQALRHISDQMYS*LPQGLQ Trigger: CTGAAGCCCCTGAGGTAACAAAGAATACATTTGATC...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | GATTCCCATCTTACTTGCTCCTCTAATGTAAAGATGTaGCATGTTCATGTCCCCACGCACATGGACTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: DSHLTCSSNVKM*HVHVPTHMDSS Trigger: TGATGAGTCCATGTGCGTGGGGACATGAACATGGCACATCTTTACATTAGAGGAGCAAGTAAGATGGGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | GGTGAGAAAAATGCCACCCTCGAAGAAAGGCTCTTTTaGAAAGAGCTCAGATACACAACACAGTCTGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GEKNATLEERLF*KELRYTTQSVH Trigger: ATGAACAGACTGTGTTGTGTATCTGAGCTCTTTGCAAAAGAGCCTTTCTTCGAGGGTGGCATTTTTCTCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | GAGCCAGGCTTGAAGTTAATTTTTCACCATGGAGCCTaGCTGCTCTCTTGGTTAACTGATTTCAGAATGATC | + |
|
Preference number: 3 (lower is better) Translates to: EPGLKLIFHHGA*LLSWLTDFRMI Trigger: GATCATTCTGAAATCAGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAAATTAACTTCAAGCCTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTACCTATTTCTTTGAGAAACTaGGAGGTTTGTTATTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AAHPVLVGKRDQMYSLLPISLRN*EVCYWG Trigger: CCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAAT...AGGTAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATATGGCTGAGACAAGTTTaGAGGCAGAGTCATACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRHINCSLEEEALYCLSIWLRQV*RQSHTQ Trigger: CTGAGTATGACTCTGCCTCAAAACTTGTCTCAGCCA...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAGCCTGGGAGCCAGGCTaGAAGTTAATTTTTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GRHINCSLEEEALYCLSIAWEPG*KLIFHH Trigger: ATGGTGAAAAATTAACTTCAAGCCTGGCTCCCAGGC...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | TTTTCACCATGGAGCCTGGCTGCTCTCTTGGTTAACTaGTTTCAGAATGATCATTCCCAAAGGCTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSPWSLAALLVN*FQNDHSQRLFS Trigger: AGAAAAGAGCCTTTGGGAATGATCATTCTGAAATCAGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | AGAGAAGCTTCTCATTCCAAGTCAGTGGAAATTTGGTaGGAAAAATGCCACCCTCGAAGAAAGGCTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: REASHSKSVEIW*EKCHPRRKALL Trigger: CAAAAGAGCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAATGAGAAGCTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | AACTGGGTGGCTGGTTGTATAAATAGGTACAGAAGGTaGTCCAAGGGTAGGCATATCAATTGTAGTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NWVAGCINRYRR*SKGRHINCSLE Trigger: CTCCAAACTACAATTGATATGCCTACCCTTGGATCACCTTCTGTACCTATTTATACAACCAGCCACCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | TCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTaGTTGCTCTATGTTGAGGGTAGTAGCTCAGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRLRMLSYRKLH*LLYVEGSSSVN Trigger: ATTCACTGAGCTACTACCCTCAACATAGAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | GAGACTTTCTTCATGTCACAGAAGCCAACAAATAAGTaGAGTCACATGAAGGTTCATGATCTGGTGACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ETFFMSQKPTNK*SHMKVHDLVTS Trigger: ACTGGTCACCAGATCATGAACCTTCATGTGACTCCACTTATTTGTTGGCTTCTGTGACATGAAGAAAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCAAGTCAGTGGAAATTTGGTGAGAAAAATGCCACCCTCGAAGAAAGGCTCCCCATTGGGTTTCTATaGCAATGTTCAACAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPSQWKFGEKNATLEERLPIGFL*QCSTRK Trigger: TTTCCTTGTTGAACATTGCAATAGAAACCCAATGGG...GAGCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAACAATGGACATTGCTTaGACTTTGAGGCCTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GRHINCSLEEEALYCLSITMDIA*TLRPKE Trigger: CTCCTTAGGCCTCAAAGTCAAAGCAATGTCCATTGT...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR TCA 72 bp | CTGTTCATTAGCCACACACACTTTCTCCTGGACAGGTaGAAGGGCAGAAGGCTTGTTTTCATTAAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LFISHTHFLLDR*KGRRLVFIKQK Trigger: TTTTTGTTTAATGAAAACAAGCCTTCTGCCCTTTCACCTGTCCAGGAGAAAGTGTGTGTGGCTAATGAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | CTCATAGAAGTACTCTTACCAATGATGTGTTTGAATTaGGAGATGGCCCAAGTGCATTCTGGCATTTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LIEVLLPMMCLN*EMAQVHSGISF Trigger: GAATGAAATGCCAGAATGCACTTGGGCCATCTCCCAATTCAAACACATCATTGGTAAGAGTACTTCTATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | AAGTTAATTTTTCACCATGGAGCCTGGCTGCTCTCTTaGTTAACTGATTTCAGAATGATCATTCCCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLIFHHGAWLLS*LTDFRMIIPKG Trigger: GCCTTTGGGAATGATCATTCTGAAATCAGTTAACCAAGAGAGCAGCCAGGCTCCATGGTGAAAAATTAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR GCA 72 bp | GAGATACTTAGTATAGATACAGTTTCCATGGTAGTATaGACCTGTAACCTTAGAATTCCAGAGGCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EILSIDTVSMVV*TCNLRIPEAEA Trigger: TGCTTCAGCCTCTGGAATTCTAAGGTTACAGGTGCATACTACCATGGAAACTGTATCTATACTAAGTATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CCA 72 bp | ATGCTATTAAAATCCGTGCAAGCTGTCATATCCCATTaGGTTTCTATTGCAATGTTCAACAAGGAAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: MLLKSVQAVISH*VSIAMFNKENS Trigger: AGAATTTTCCTTGTTGAACATTGCAATAGAAACCCAATGGGATATGACAGCTTGCACGGATTTTAATAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GGGGAACGGTCTCCTATCTTAGTTCCCACTGGAGCTTaGCTGGCCACTGAGCCACAGTGGAAGCTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GERSPILVPTGA*LATEPQWKLPW Trigger: CCAGGGGAGCTTCCACTGTGGCTCAGTGGCCAGCAAAGCTCCAGTGGGAACTAAGATAGGAGACCGTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATTGGGGGAACGGTCTAGAAAGGGTGCCTCTTaGCCTCGGCGGCCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGNFFEKLGGLLLGERSRKGAS*PRRPPP Trigger: AGGAGGGGGCCGCCGAGGTCAAGAGGCACCCTTTCT...AGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATTGGCAGCCCAGCCTCTaGTTCGAGTCTTTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLISAFFGAGLSYEADSHWQPSL*FESLVS Trigger: GCTCACCAAAGACTCGAAGCAGAGGCTGGGCTGCCA...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCTCAGCAAGACCGTGTTaGCCACGATGTTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRYESHLSGRVKTEFSHASARPC*PRCFPA Trigger: AGCTGGAAAACATCGTGGCCAACACGGTCTTGCTGA...GGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATACCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAACAACACATCTCAGAGACTGTTGCAGATGGACTTaGCCTCTTCAGAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGKPLAGCPSKRTTHLRDCCRWT*PLQRTW Trigger: CCAAGTTCTCTGAAGAGGCCAAGTCCATCTGCAACA...GTCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | ACTTCACTGGTGCCTAGGCTTGTTCTTAGGCATCCCATTTTCCTGGTGAGACTTTACAGCCCGGGGATCTaGAACGAAGGGAGGGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLVPRLVLRHPIFLVRLYSPGI*NEGRVQ Trigger: TTGGACCCTCCCTTCGTTCCAGATCCCCGGGCTGTA...AAGTCTCACCAGGAAAATGGGATGCCTAAGAACAAGCCTAGGCACCAGTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | TATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCCTGGAAGGTCTTCACACTGGCTaGTGTGAGGAAACTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YESHLSGRVKTEFSHALEGLHTG*CEETSG Trigger: TCCTGAAGTTTCCTCACATCAGCCAGTGTGAAGACC...TTCCAGGGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGCAAGCCTCTTGCTGGCTGCCCCTCCAAGAGAACAACACATCTCAGAGACCTGGGGACTTTGGAGTaGGGTACTTGGTCATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: CGKPLAGCPSKRTTHLRDLGTLE*GTWSLF Trigger: AAATAATGACCAAGTACCTCACTCCAAAGTCCCCAG...GTCTCTGAGATGTGTTGTTCTCTTGGAGGGGCAGCCAGCAAGAGGCTTGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTACAAGTTCTGCTTCCAAGTAGAAGGCTCTGAGCTGGTTCCACTTTTGCAGAGAAGAGTTCTTTaGAGGGGCTCTGCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGYKFCFQVEGSELVPLLQRRVL*RGSAGA Trigger: AGCTCCTGCAGAGCCCCTGCAAAGAACTCTTCTCTG...CAAAAGTGGAACCAGCTCAGAGCCTTCTACTTGGAAGCAGAACTTGTAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GAAGTAAGAAACAAACCTGTAAGGAGGAGGCAGGGATaGTGTGTGGCTGAGGCTGATGACCATCCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRNKPVRRRQG*CVAEADDHPRK Trigger: CTTCCTGGGATGGTCATCAGCCTCAGCCACACACAATCCCTGCCTCCTCCTTACAGGTTTGTTTCTTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | TATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCCTGGAATCACACTGGCTGATGTaGGGAAACTTCAGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YESHLSGRVKTEFSHALESHWLM*GNFRIS Trigger: GGAAATCCTGAAGTTTCCTCACATCAGCCAGTGTGA...TTCCAGGGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATGCCTTTATACTTCACCACAAACTGGCTGTTaGCCTTCTCAAGAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLWPTSPGEVTMRCLYTSPQTGC*PSQESA Trigger: AGCAGATTCTTGAGAAGGTCAACAGCCAGTTTGTGG...TGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | CTAGCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTAGGCGGTTCTGGAGGCTaGCTTCTGTTCAGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAHPVLVGKRDQMYSLLGGSGG*LLFRSG Trigger: ACCAGACCTGAACAGAAGTCAGCCTCCAGAACCGCC...TAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCAGCTTCTTCTCTGTCTaGGAGACCAGGTCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTESHDFPYLPQALRHISSFFSV*ETRSCP Trigger: TGGACAGGACCTGGTCTCCCAGACAGAGAAGAAGCT...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTACAAGTTCTGCTTCCAAGTAGAAGGCTCTGAGCTGGTTCCACTTTTGGCAGCATGTTGCAGATaGACTTGGCCTCTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGYKFCFQVEGSELVPLLAACCR*TWPLQR Trigger: TCTCTGAAGAGGCCAAGTCCATCTGCAACATGCTGC...CAAAAGTGGAACCAGCTCAGAGCCTTCTACTTGGAAGCAGAACTTGTAGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCGAACAGCCCTTTCTTTaGCGGTTCTGGAGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KTESHDFPYLPQALRHISEQPFL*RFWRLT Trigger: AGTCAGCCTCCAGAACCGCCAAAGAAAGGGCTGTTC...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | CCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTaGTTACCTCAGGGGCTTCAGGGGCTAGGTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLVGKRDQMYS*LPQGLQGLGDN Trigger: GTTGTCACCTAGCCCCTGAAGCCCCTGAGGTAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCGGTCTTCACACTGGCTaGTGTGAGGAAACTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTESHDFPYLPQALRHISGLHTG*CEETSG Trigger: TCCTGAAGTTTCCTCACATCAGCCAGTGTGAAGACC...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATTGGGGGAACGGTCTTTCCTGAAGAAAGGGTaGCTCTTGACCTCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGNFFEKLGGLLLGERSFLKKG*LLTSAA Trigger: GGCCGCCGAGGTCAAGAGGCACCCTTTCTTCAGGAA...AGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | TATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCCTGGAAAGTAATCTCTGTCTATaGTCCTTCGGAGGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YESHLSGRVKTEFSHALESNLCL*SFGGLH Trigger: GTGAAGACCTCCGAAGGACCATAGACAGAGATTACT...TTCCAGGGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATGCCTTTATACTTCAGGCATAGTGCATCTTTaGTTTCATAGGCATAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWPTSPGEVTMRCLYTSGIVHL*FHRHRP Trigger: TGGCCTATGCCTATGAAACCAAAGATGCACTATGCC...TGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTCTGGCCCACCTCTCCTGGGGAAGTGACAATGAGATGCCTTTATACTTCACATCTCATTTTGCCATaGAATTGGCACAGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWPTSPGEVTMRCLYTSHLILP*NWHRAC Trigger: ACAGGCTCTGTGCCAATTCCATGGCAAAATGAGATG...TGAAGTATAAAGGCATCTCATTGTCACTTCCCCAGGAGAGGTGGGCCAGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | TGGAGTCACATGAAGGTTCATGATCTGGTGACCAGTTaGCTGACCAGCCAAGGCCTAAACAAACTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSHMKVHDLVTS*LTSQGLNKLGG Trigger: ACCTCCAAGTTTGTTTAGGCCTTGGCTGGTCAGCAAACTGGTCACCAGATCATGAACCTTCATGTGACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | CCCAAGAAAAGTTCAGAAATAGCCTGGGAGCCAGGCTaGAAGTTAATTTTTCACCATGGAGCCTGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKKSSEIAWEPG*KLIFHHGAWLL Trigger: GAGCAGCCAGGCTCCATGGTGAAAAATTAACTTCAAGCCTGGCTCCCAGGCTATTTCTGAACTTTTCTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCGAAGACTGGGGACTTTaGAGTGAGGTACTTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTESHDFPYLPQALRHISEDWGL*SEVLGH Trigger: ATGACCAAGTACCTCACTCCAAAGTCCCCAGTCTTC...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGGTTGTTCAGAACTTCTaGGGCCATGTAGCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQVVQNF*GHVANS Trigger: ACTGTTGGCTACATGGCCCCAGAAGTTCTGAACAAC...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCAATCATCTCATAGATaGGGCAGCCCAGGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLQSSHR*GSPGPS Trigger: ACTGGGGCCTGGGCTGCCTCATCTATGAGATGATTG...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATTGGGGGAACGGTCTGCTTCGAGTCTTTGGTaGGCAGCATGTTGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGNFFEKLGGLLLGERSASSLW*AACCRW Trigger: CCATCTGCAACATGCTGCTCACCAAAGACTCGAAGC...AGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATGATCATTCCCAAAGGCTCTTTTCTAGCAATGAGCCTTGGGAGAGCTTCAGCAAGACCGTGTTaGCCACGATGTTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRMIIPKGSFLAMSLGRASARPC*PRCFPA Trigger: AGCTGGAAAACATCGTGGCCAACACGGTCTTGCTGA...AGCTCTCCCAAGGCTCATTGCTAGAAAAGAGCCTTTGGGAATGATCATTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATTGGGGGAACGGTCTCTATCCAGGTACTCGTaGAAGGGGTCTCCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGNFFEKLGGLLLGERSLSRYS*KGSPFK Trigger: CTTGAAGGGAGACCCCTTCCACGAGTACCTGGATAG...AGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCCCGTATGGTCCAGGTTaGCACCTTTCACAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLPYGPG*HLSQWR Trigger: TCTCCACTGTGAAAGGTGTCAACCTGGACCATACGG...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCGCCTGAAGAGTCTGTaGAACAGCCCTTTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLRLKSL*NSPFFG Trigger: GCCAAAGAAAGGGCTGTTCCACAGACTCTTCAGGCG...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCTTTCATATTTGTCTTTaGAGTGAGGTACTTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRYESHLSGRVKTEFSHAFHICL*SEVLGH Trigger: ATGACCAAGTACCTCACTCCAAAGACAAATATGAAA...GGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATACCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| 3UTR CAA 72 bp | GAGATGGCCCAAGTGCATTCTGGCATTTCATTCAGCTaGTTACAAGTCAACAGGAGAGTGATAGCTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: EMAQVHSGISFS*LQVNRRVIATL Trigger: CAGTGTAGCTATCACTCTCCTGTTGACTTGTAACAAGCTGAATGAAATGCCAGAATGCACTTGGGCCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | TGGGGATTCTCTGCTACAATGGACATTGCTTTGACTTaGAGGCCTAAGGAGAAACTGCTTCCTAAGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGFSATMDIALT*RPKEKLLPKSS Trigger: GGAACTCTTAGGAAGCAGTTTCTCCTTAGGCCTCAAAGTCAAAGCAATGTCCATTGTAGCAGAGAATCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGTCATTGAACTGGAAAAATGCCCAGCATCTTCTTTTAGGGTAAAGGGTTCACACTGGCTGATGTaGGGAAACTTCAGGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WCVIELEKCPASSFRVKGSHWLM*GNFRIS Trigger: GGAAATCCTGAAGTTTCCTCACATCAGCCAGTGTGA...ACCCTTTACCCTAAAAGAAGATGCTGGGCATTTTTCCAGTTCAATGACACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAGTCAGTGGAAATTTGGTGAGAAAAATGCCACCCTCGAAGAAAGGCTCAGGTTGACCACAAACTaGCTGTTGACCTTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPSQWKFGEKNATLEERLRLTTN*LLTFSR Trigger: TCTTGAGAAGGTCAACAGCCAGTTTGTGGTCAACCT...GAGCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GACCTGAGTGGAAATTTCTTTGAGAAACTTGGAGGTTaGTTATTGGGGGAACGGTCTCCTATCTTAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLSGNFFEKLGG*LLGERSPILVP Trigger: GGGAACTAAGATAGGAGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACTCAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GTCCTGCTCATAGAAGTACTCTTACCAATGATGTGTTaGAATTGGGAGATGGCCCAAGTGCATTCTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLLIEVLLPMMC*NWEMAQVHSGI Trigger: AATGCCAGAATGCACTTGGGCCATCTCCCAATTCAAACACATCATTGGTAAGAGTACTTCTATGAGCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | AAGCAGAGAAGCTTCTCATTCCAAGTCAGTGGAAATTaGGTGAGAAAAATGCCACCCTCGAAGAAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQRSFSFQVSGN*VRKMPPSKKGS Trigger: AGAGCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAATGAGAAGCTTCTCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATGATCATTCCCAAAGGCTCTTTTCTAGCAATGAGCCTTGGGAGAGCTGCCGGAAAGTGTTTTTaGTCACTGGTTGTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FRMIIPKGSFLAMSLGRAAGKCF*SLVVFL Trigger: TAGAAAGACAACCAGTGACCAAAAACACTTTCCGGC...AGCTCTCCCAAGGCTCATTGCTAGAAAAGAGCCTTTGGGAATGATCATTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAGTCAGTGGAAATTTGGTGAGAAAAATGCCACCCTCGAAGAAAGGCTCATTTTGCCATGGAATTaGCACAGAGCCTGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPSQWKFGEKNATLEERLILPWN*HRACRE Trigger: TTCTCTACAGGCTCTGTGCCAATTCCATGGCAAAAT...GAGCCTTTCTTCGAGGGTGGCATTTTTCTCACCAAATTTCCACTGACTTGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | AGTGGAAATTTCTTTGAGAAACTTGGAGGTTTGTTATaGGGGGAACGGTCTCCTATCTTAGTTCCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGNFFEKLGGLL*GERSPILVPTG Trigger: TCCAGTGGGAACTAAGATAGGAGACCGTTCCCCCAATAACAAACCTCCAAGTTTCTCAAAGAAATTTCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | AATCCGTGCAAGCTGTCATATCCCATTGGGTTTCTATaGCAATGTTCAACAAGGAAAATTCTAGTCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPCKLSYPIGFL*QCSTRKILVHP Trigger: GGGGTGGACTAGAATTTTCCTTGTTGAACATTGCAATAGAAACCCAATGGGATATGACAGCTTGCACGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | AGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTaGCTCTATGTTGAGGGTAGTAGCTCAGTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLRMLSYRKLHC*LYVEGSSSVNL Trigger: CAAATTCACTGAGCTACTACCCTCAACATAGAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | CCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTaGCATTGCTTGCTCTATGTTGAGGGTAGTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSRLRMLSYRK*HCLLYVEGSSS Trigger: TGAGCTACTACCCTCAACATAGAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTATCTATCATCTCATTTTaGCATGGAATTGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAHPVLVGKRDQMYSLLSIISF*HGIGTE Trigger: CTCTGTGCCAATTCCATGGCAAAATGAGATGATAGA...TAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAAGTAATCTCTGTCTATaGTCCTTCGGAGGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHINCSLEEEALYCLSISNLCL*SFGGLH Trigger: GTGAAGACCTCCGAAGGACCATAGACAGAGATTACT...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GCTCATAGAAGTACTCTTACCAATGATGTGTTTGAATaGGGAGATGGCCCAAGTGCATTCTGGCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: AHRSTLTNDVFE*GDGPSAFWHFI Trigger: AATGAAATGCCAGAATGCACTTGGGCCATCTCCCAATTCAAACACATCATTGGTAAGAGTACTTCTATGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGACCTTCTCAAGAATCTaGTTTTCGTTGAGTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLTFSRI*FSLSAM Trigger: CATGGCACTCAACGAAAAGCAGATTCTTGAGAAGGT...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCACCCTGTCCTGGTGGGAAAGAGAGATCAAATGTATTCTTTGTTACCTGAGTTTGAATTGATGTaGTTTGAATTTATTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHPVLVGKRDQMYSLLPEFELM*FEFIRW Trigger: CCACCGAATAAATTCAAACCACATCAATTCAAACTC...AGGTAACAAAGAATACATTTGATCTCTCTTTCCCACCAGGACAGGGTGAGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCTCTAACCATTTCCACTaGAGAAAACGGTCAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLSRLRMLSYRKLHCLLSNHFH*RKRSKY Trigger: GTATTTTGACCGTTTTCTGCAGTGGAAATGGTTAGA...GAGCAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| 3UTR CAA 72 bp | GATGCTATTAAAATCCGTGCAAGCTGTCATATCCCATaGGGTTTCTATTGCAATGTTCAACAAGGAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: DAIKIRASCHIP*GFYCNVQQGKF Trigger: GAATTTTCCTTGTTGAACATTGCAATAGAAACCCAATGGGATATGACAGCTTGCACGGATTTTAATAGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS CCA 90 bp | GAGAAGAGTTCTTTGCAGGGGCTCTGCAGGAGCTTCTTCTCTGTCTaGGAGACCAGGTCCTGTCCAACTTGGGCAATGAAGACTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EKSSLQGLCRSFFSV*ETRSCPTWAMKTGD Trigger: GTCCCCAGTCTTCATTGCCCAAGTTGGACAGGACCTGGTCTCCCAGACAGAGAAGAAGCTCCTGCAGAGCCCCTGCAAAGAACTCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS TCA 90 bp | ATCCACCTCTTCCCGCTTAACCTTCTCCTTGCGACCTCGAAATGGTaGCTGGCCTTCAATCATCTCATAGATGAGGCAGCCCAGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHLFPLNLLLATSKW*LAFNHLIDEAAQAP Trigger: TGGGGCCTGGGCTGCCTCATCTATGAGATGATTGAAGGCCAGTCACCATTTCGAGGTCGCAAGGAGAAGGTTAAGCGGGAAGAGGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
||
| CDS-3UTR CAA 90 bp | GGTATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCCATGCCCTGGTTCAGCAAGACCGTGTaGGCCACGATGTTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GMSPTFLAGSKLSSPMPWFSKTV*ATMFSS Trigger: GCTGGAAAACATCGTGGCCAACACGGTCTTGCTGAA...CCAGGGCATGGGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
||
| CDS TCA 90 bp | CCCTTTCTTTGGCGGTTCTGGAGGCTGACTTCTGTTCAGGTCTGGTaGGAGGGTACCGTTAGGTCCGAACACATTCAGCTCCTTGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PFLWRFWRLTSVQVW*EGTVRSEHIQLLET Trigger: TGTTTCAAGGAGCTGAATGTGTTCGGACCTAACGGTACCCTCTCACCAGACCTGAACAGAAGTCAGCCTCCAGAACCGCCAAAGAAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CCA 90 bp | TGCAGGAGCTTCTTCTCTGTCTGGGAGACCAGGTCCTGTCCAACTTaGGCAATGAAGACTGGGGACTTTGGAGTGAGGTACTTGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: CRSFFSVWETRSCPT*AMKTGDFGVRYLVI Trigger: AATGACCAAGTACCTCACTCCAAAGTCCCCAGTCTTCATTGCCCAAGTTGGACAGGACCTGGTCTCCCAGACAGAGAAGAAGCTCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | TTTCTGATCTCAGCTTTCTTTGGGGCTGGCCTCAGTTATGAGGCAGATTCCCATGGAACAGCCCTTTCTTaGGCGGTTCTGGAGGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FLISAFFGAGLSYEADSHGTALS*AVLEAD Trigger: GTCAGCCTCCAGAACCGCCAAAGAAAGGGCTGTTCC...ATGGGAATCTGCCTCATAACTGAGGCCAGCCCCAAAGAAAGCTGAGATCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CCA 90 bp | CTGCCACTAAGTCCAGGAACTGAATGTAGCACTCCAGCCCAGGCCTaGTTTCACAGAACTGTCGAAAAAGCAGTCTCCCAATTGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LPLSPGTECSTPAQA*FHRTVEKAVSQLVA Trigger: AGCAACCAATTGGGAGACTGCTTTTTCGACAGTTCTGTGAAACCAGGCCTGGGCTGGAGTGCTACATTCAGTTCCTGGACTTAGTGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003313.10 ENSMUST00000236876.2 |
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| CDS-3UTR CAA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGCAGGTCCTGTCCAACTaGGGCAATGAAGACTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQQVLSN*GNEDWG Trigger: TCCCCAGTCTTCATTGCCCAAGTTGGACAGGACCTG...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | AAGACTGAATCACATGACTTTCCTTACCTCCCACAGGCACTCAGGCACATTTCCATGTCCAGCACATCCTaGCAGTATACAGCCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: KTESHDFPYLPQALRHISMSSTS*QYTARG Trigger: TCCCCGGGCTGTATACTGCAAGGATGTGCTGGACAT...GGAAATGTGCCTGAGTGCCTGTGGGAGGTAAGGAAAGTCATGTGATTCAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CAGAATGATCATAGCAGAGGCCTATCTCCCAAACAGCAAAAGCAGAGAAGCTTCTCCGTATGGTCCAGGTaGACACCTTTCACAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QNDHSRGLSPKQQKQRSFSVWSR*TPFTVE Trigger: CTCCACTGTGAAAGGTGTCAACCTGGACCATACGGA...GAAGCTTCTCTGCTTTTGCTGTTTGGGAGATAGGCCTCTGCTATGATCATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | AGCCATCTCAGGTATGAGTCCCACCTTTCTGGCAGGGTCAAAACTGAGTTCTCCATTTCCTTCCACTTCTaGCTTTTCCCTTTGCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SHLRYESHLSGRVKTEFSISFHF*LFPLRF Trigger: AAAGCGCAAAGGGAAAAGCAAGAAGTGGAAGGAAAT...GGAGAACTCAGTTTTGACCCTGCCAGAAAGGTGGGACTCATACCTGAGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
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| CDS-3UTR CAA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAGCAGAGAAGAGTTCTTaGCAGGGGCTCTGCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GRHINCSLEEEALYCLSIAEKSS*QGLCRS Trigger: GCTCCTGCAGAGCCCCTGCAAAGAACTCTTCTCTGC...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CATTTCCATGTACAGGCCTTTCAGGACCTCATGATGGGAACTCTTGGTAGACAGACCACAAACTGGCTGTaGACCTTCTCAAGAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: HFHVQAFQDLMMGTLGRQTTNWL*TFSRIC Trigger: GCAGATTCTTGAGAAGGTCAACAGCCAGTTTGTGGT...CTGTCTACCAAGAGTTCCCATCATGAGGTCCTGAAAGGCCTGTACATGGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | TTCAGAATGATCATTCCCAAAGGCTCTTTTCTAGCAATGAGCCTTGGGAGAGCTAGTCCATATCGCTGGTaGTTCAGAACTTCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FRMIIPKGSFLAMSLGRASPYRW*FRTSGA Trigger: GGCCCCAGAAGTTCTGAACAACCAGCGATATGGACT...AGCTCTCCCAAGGCTCATTGCTAGAAAAGAGCCTTTGGGAATGATCATTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | TTCAGAATGATCATTCCCAAAGGCTCTTTTCTAGCAATGAGCCTTGGGAGAGCTTTGGTGAGCAGCATGTaGCAGATGGACTTGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FRMIIPKGSFLAMSLGRALVSSM*QMDLAS Trigger: AGAGGCCAAGTCCATCTGCAACATGCTGCTCACCAA...AGCTCTCCCAAGGCTCATTGCTAGAAAAGAGCCTTTGGGAATGATCATTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGTTCAGCAAGACCGTGTaGGCCACGATGTTTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLFSKTV*ATMFSS Trigger: GCTGGAAAACATCGTGGCCAACACGGTCTTGCTGAA...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CAGAATGATCATAGCAGAGGCCTATCTCCCAAACAGCAAAAGCAGAGAAGCTTCTTTGGAGTGAGGTACTaGGTCATTATTTCCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: QNDHSRGLSPKQQKQRSFFGVRY*VIISFP Trigger: GGGGAAGGAAATAATGACCAAGTACCTCACTCCAAA...GAAGCTTCTCTGCTTTTGCTGTTTGGGAGATAGGCCTCTGCTATGATCATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CAGAATGATCATAGCAGAGGCCTATCTCCCAAACAGCAAAAGCAGAGAAGCTTCTGCCGGAAAGTGTTTTaGGTCACTGGTTGTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: QNDHSRGLSPKQQKQRSFCRKVF*VTGCLS Trigger: AGAAAGACAACCAGTGACCAAAAACACTTTCCGGCA...GAAGCTTCTCTGCTTTTGCTGTTTGGGAGATAGGCCTCTGCTATGATCATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | CCATTTCCTTTATCAAGGCTTAGAATGCTAAGCTACAGGAAGTTGCATTGCTTGCTCTGCTTCGAGTCTTaGGTGAGCAGCATGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PFPLSRLRMLSYRKLHCLLCFES*VSSMLQ Trigger: CTGCAACATGCTGCTCACCAAAGACTCGAAGCAGAG...CAAGCAATGCAACTTCCTGTAGCTTAGCATTCTAAGCCTTGATAAAGGAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 90 bp | CATCTCATTTTGCCATGGAATTGGCACAGAGCCTGTAGAGAACTTTaGGTAAAAATCATCGTCCGTATGGTCCAGGTTGACACCTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: HLILPWNWHRACREL*VKIIVRMVQVDTFH Trigger: GTGAAAGGTGTCAACCTGGACCATACGGACGATGATTTTTACTCAAAGTTCTCTACAGGCTCTGTGCCAATTCCATGGCAAAATGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 90 bp | AACTCCTATCTTGCTTCTTCAGATGTTTCATATTTGTCTTTGGAGTaGGGTACTTGGTCATTATTTCCTTCCCCTTCGCCCCAAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: NSYLASSDVSYLSLE*GTWSLFPSPSPQGF Trigger: AAAACCTTGGGGCGAAGGGGAAGGAAATAATGACCAAGTACCTCACTCCAAAGACAAATATGAAACATCTGAAGAAGCAAGATAGGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
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| CDS CCA 90 bp | CTGCTTCCAGTGGAGTTTGAATTGATGTGGTTTGAATTTATTCGGTaGTTACAACTGGTCTTAGGAGTAGGTGAACTCTTGGAATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LLPVEFELMWFEFIR*LQLVLGVGELLELL Trigger: AAGCAATTCCAAGAGTTCACCTACTCCTAAGACCAGTTGTAACCACCGAATAAATTCAAACCACATCAATTCAAACTCCACTGGAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS-3UTR CAA 90 bp | GGTAGGCATATCAATTGTAGTTTGGAGGAAGAGGCTTTATACTGCCTTTCCATAATTTCCTTCCACTTCTaGCTTTTCCCTTTGCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GRHINCSLEEEALYCLSIISFHF*LFPLRF Trigger: AAAGCGCAAAGGGAAAAGCAAGAAGTGGAAGGAAAT...TATGGAAAGGCAGTATAAAGCCTCTTCCTCCAAACTACAATTGATATGCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS GCA 72 bp | TCCAGGCGCTTAAAGTTCATGTTCCTGAAGAAAGGGTaGCTCTTGACCTCGGCGGCCCCCTCCTCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRRLKFMFLKKG*LLTSAAPSSWQ Trigger: CTGCCAGGAGGAGGGGGCCGCCGAGGTCAAGAGGCACCCTTTCTTCAGGAACATGAACTTTAAGCGCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | TGGCGGTTCTGGAGGCTGACTTCTGTTCAGGTCTGGTaGGAGGGTACCGTTAGGTCCGAACACATTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: WRFWRLTSVQVW*EGTVRSEHIQL Trigger: GAGCTGAATGTGTTCGGACCTAACGGTACCCTCTCACCAGACCTGAACAGAAGTCAGCCTCCAGAACCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CAA 72 bp | ACCCGGCGATCCACCTCTTCCCGCTTAACCTTCTCCTaGCGACCTCGAAATGGTGACTGGCCTTCAATCATC | + |
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Preference number: 6 (lower is better) Translates to: TRRSTSSRLTFS*RPRNGDWPSII Trigger: GATGATTGAAGGCCAGTCACCATTTCGAGGTCGCAAGGAGAAGGTTAAGCGGGAAGAGGTGGATCGCCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS GCA 72 bp | CATGGACAGACTGAGCACAAGCAGAGAAGAGTTCTTTaGAGGGGCTCTGCAGGAGCTTCTTCTCTGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HGQTEHKQRRVL*RGSAGASSLSG Trigger: CCCAGACAGAGAAGAAGCTCCTGCAGAGCCCCTGCAAAGAACTCTTCTCTGCTTGTGCTCAGTCTGTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CAA 90 bp | CTGCAGGAGCTTCTTCTCTGTCTGGGAGACCAGGTCCTGTCCAACTaGGGCAATGAAGACTGGGGACTTTGGAGTGAGGTACTTGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LQELLLCLGDQVLSN*GNEDWGLWSEVLGH Trigger: ATGACCAAGTACCTCACTCCAAAGTCCCCAGTCTTCATTGCCCAAGTTGGACAGGACCTGGTCTCCCAGACAGAGAAGAAGCTCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CAA 72 bp | CTTCTTCTCTGTCTGGGAGACCAGGTCCTGTCCAACTaGGGCAATGAAGACTGGGGACTTTGGAGTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLLCLGDQVLSN*GNEDWGLWSEV Trigger: TACCTCACTCCAAAGTCCCCAGTCTTCATTGCCCAAGTTGGACAGGACCTGGTCTCCCAGACAGAGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | TTCCCGCTTAACCTTCTCCTTGCGACCTCGAAATGGTaGCTGGCCTTCAATCATCTCATAGATGAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FPLNLLLATSKW*LAFNHLIDEAA Trigger: GGCTGCCTCATCTATGAGATGATTGAAGGCCAGTCACCATTTCGAGGTCGCAAGGAGAAGGTTAAGCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | CTCTGTCTATGGTCCTTCGGAGGTCTTCACACTGGCTaGTGTGAGGAAACTTCAGGATTTCCTTCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LCLWSFGGLHTG*CEETSGFPSTS Trigger: AGAAGTGGAAGGAAATCCTGAAGTTTCCTCACATCAGCCAGTGTGAAGACCTCCGAAGGACCATAGACAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003313.10 ENSMUST00000236876.2 |
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| CDS CAA 72 bp | TTCGAGTCTTTGGTGAGCAGCATGTTGCAGATGGACTaGGCCTCTTCAGAGAACTTGGAGGAATACACTTCC | + |
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Preference number: 6 (lower is better) Translates to: FESLVSSMLQMD*ASSENLEEYTS Trigger: GGAAGTGTATTCCTCCAAGTTCTCTGAAGAGGCCAAGTCCATCTGCAACATGCTGCTCACCAAAGACTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS GCA 72 bp | TTGACCACAAACTGGCTGTTGACCTTCTCAAGAATCTaGTTTTCGTTGAGTGCCATGGATTCGCCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTTNWLLTFSRI*FSLSAMDSPFL Trigger: GAGGAAAGGCGAATCCATGGCACTCAACGAAAAGCAGATTCTTGAGAAGGTCAACAGCCAGTTTGTGGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | TTGCCATGGAATTGGCACAGAGCCTGTAGAGAACTTTaGGTAAAAATCATCGTCCGTATGGTCCAGGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LPWNWHRACREL*VKIIVRMVQVD Trigger: GTCAACCTGGACCATACGGACGATGATTTTTACTCAAAGTTCTCTACAGGCTCTGTGCCAATTCCATGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | ACTTTGAGTAAAAATCATCGTCCGTATGGTCCAGGTTaGCACCTTTCACAGTGGAGAACTGCTCAATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TLSKNHRPYGPG*HLSQWRTAQCP Trigger: TGGACATTGAGCAGTTCTCCACTGTGAAAGGTGTCAACCTGGACCATACGGACGATGATTTTTACTCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS TCA 72 bp | ATTTATTCGGTGGTTACAACTGGTCTTAGGAGTAGGTaGACTCTTGGAATTGCTTTGATGCTGACGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: IYSVVTTGLRSR*TLGIALMLTPE Trigger: TTCAGGCGTCAGCATCAAAGCAATTCCAAGAGTTCACCTACTCCTAAGACCAGTTGTAACCACCGAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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| CDS CAA 72 bp | TTCAGATGTTTCATATTTGTCTTTGGAGTGAGGTACTaGGTCATTATTTCCTTCCCCTTCGCCCCAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FRCFIFVFGVRY*VIISFPFAPRF Trigger: AAACCTTGGGGCGAAGGGGAAGGAAATAATGACCAAGTACCTCACTCCAAAGACAAATATGAAACATCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236876.2 |
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| CDS CCA 72 bp | GTGGAGTTTGAATTGATGTGGTTTGAATTTATTCGGTaGTTACAACTGGTCTTAGGAGTAGGTGAACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VEFELMWFEFIR*LQLVLGVGELL Trigger: CAAGAGTTCACCTACTCCTAAGACCAGTTGTAACCACCGAATAAATTCAAACCACATCAATTCAAACTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003313.10 |
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