RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042249

Ensembl transcript IDs: ENSMUST00000065167.9, ENSMUST00000197776.2, ENSMUST00000197888.5, ENSMUST00000200332.5

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCCCCGAGGATGTCCCAGCTCCCAGAAGGCCGCCCTGGTGTCCTaGGCCTCCTCGGCTTGGAGCAGCCCCGTCAGTGCTCAGAAACAC +
Preference number: 1 (lower is better)
Translates to: QPRGCPSSQKAALVS*ASSAWSSPVSAQKH
Trigger: GTGTTTCTGAGCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAGGACACCAGGGCGGCCTTCTGGGAGCTGGGACATCCTCGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp TGCTCCTTCAACTCTCGTGCCCCTCCTCCTCCGCAGCCCAGCCGCTaGCTCACGTCCCGCTGGAGCAAACCCTCTAAGAGGGACCTCAGC +
Preference number: 1 (lower is better)
Translates to: CSFNSRAPPPPQPSR*LTSRWSKPSKRDLS
Trigger: GCTGAGGTCCCTCTTAGAGGGTTTGCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 90 bp TTCAGGCCCCGCTGCTCTGTGGTTCAGAGGCCGCTGCTATTTCTGTaGCACAGTGGTGGCTTGGAGAACTCCAGGATGGCGGCCCGTGGT +
Preference number: 1 (lower is better)
Translates to: FRPRCSVVQRPLLFL*HSGGLENSRMAARG
Trigger: ACCACGGGCCGCCATCCTGGAGTTCTCCAAGCCACCACTGTGTCACAGAAATAGCAGCGGCCTCTGAACCACAGAGCAGCGGGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp GGAGCCTCAACCCCTACACCTCAGGCAGGCACTCGGACACAGCAATaGCTAGAACAGGCCACCATAGTCCCAGAGACCGTGCTTCCACCC +
Preference number: 1 (lower is better)
Translates to: GASTPTPQAGTRTQQ*LEQATIVPETVLPP
Trigger: GGGTGGAAGCACGGTCTCTGGGACTATGGTGGCCTGTTCTAGGCATTGCTGTGTCCGAGTGCCTGCCTGAGGTGTAGGGGTTGAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp TCTGTGACACAGTGGTGGCTTGGAGAACTCCAGGATGGCGGCCCGTaGTTTGTTGAGGAATTTGGGGGCACGGCGCAGCAGTCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: SVTQWWLGELQDGGP*FVEEFGGTAQQSLG
Trigger: GCCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCGCCATCCTGGAGTTCTCCAAGCCACCACTGTGTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 90 bp GAGGTGCAAGCCAGATTTGAGAAATCTAGGCAGTGGGGCTGGCCCTaGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTCCTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: EVQARFEKSRQWGWP*MRPSLSTEPAFLPG
Trigger: GCCAGGGAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTGCCTAGATTTCTCAAATCTGGCTTGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 90 bp GCCCGTGGTTTGTTGAGGAATTTGGGGGCACGGCGCAGCAGTCTCTaGGCCTCATTGAAGGTGCAGGTCAGCTCCTTCAGCCACTGTGCA +
Preference number: 1 (lower is better)
Translates to: ARGLLRNLGARRSSL*ASLKVQVSSFSHCA
Trigger: TGCACAGTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp GCACGCCATGCATTGGGGGCACTGTCTGGTGGGTTACCTAGGTCCTaGTTGAAGTCTGTGCCCACCAGAAATGGCTGTGATGGATGCCGC +
Preference number: 1 (lower is better)
Translates to: ARHALGALSGGLPRS*LKSVPTRNGCDGCR
Trigger: GCGGCATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCAATGCATGGCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 90 bp GCCATGCATTGGGGGCACTGTCTGGTGGGTTACCTAGGTCCTGCTTaGAGTCTGTGCCCACCAGAAATGGCTGTGATGGATGCCGCGAAG +
Preference number: 1 (lower is better)
Translates to: AMHWGHCLVGYLGPA*SLCPPEMAVMDAAK
Trigger: CTTCGCGGCATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCAATGCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 90 bp CATCTAAGTTGGACACGCACCCCTCCACAGCCCATTCATGGACAGTaGCTAGGTCACAGCCTCACACTGCCTGGGCGACACAGCCACAGT +
Preference number: 1 (lower is better)
Translates to: HLSWTRTPPQPIHGQ*LGHSLTLPGRHSHS
Trigger: ACTGTGGCTGTGTCGCCCAGGCAGTGTGAGGCTGTGACCTAGTCACTGTCCATGAATGGGCTGTGGAGGGGTGCGTGTCCAACTTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 90 bp TGTCTTCCTCATCGAAGGAGCCGATATCGAAGGCATCTGCAGCGTTaGCCTCTCCCCGAGGAGGGATTAGGGGTGGCGGGTACTTCCGTA +
Preference number: 1 (lower is better)
Translates to: CLPHRRSRYRRHLQR*PLPEEGLGVAGTSV
Trigger: TACGGAAGTACCCGCCACCCCTAATCCCTCCTCGGGGAGAGGTCAACGCTGCAGATGCCTTCGATATCGGCTCCTTCGATGAGGAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp GCGTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATaGCAAGTGTGTGGCTTCCATCAGCCAACCAAGCCTTCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: ACPLSSPHSLLGGSS*QVCGFHQPTKPSPS
Trigger: AGAGGGAGAAGGCTTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 90 bp TTCCGTAAGTACACATGCTGCCAGTCAATGCCCTTGAAGAAGATGTaGTCCTTCAACTCTCGTGCCCCTCCTCCTCCGCAGCCCAGCCGC +
Preference number: 1 (lower is better)
Translates to: FRKYTCCQSMPLKKM*SFNSRAPPPPQPSR
Trigger: GCGGCTGGGCTGCGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 90 bp GATTCTGAGGGCGTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTaGGTCATCATGCCAAGTGTGTGGCTTCCATCAGCCAACCAAGCC +
Preference number: 1 (lower is better)
Translates to: DSEGVSLELPSFPPW*VIMPSVWLPSANQA
Trigger: GGCTTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACACGCCCTCAGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp GGGGATTCTGAGGGCGTGTCCCTTGAGCTCCCCTCATTCCCTCCTTaGTGGGTCATCATGCCAAGTGTGTGGCTTCCATCAGCCAACCAA +
Preference number: 1 (lower is better)
Translates to: GDSEGVSLELPSFPP*WVIMPSVWLPSANQ
Trigger: TTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACACGCCCTCAGAATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp GACTCTGAGGTGCAAGCCAGATTTGAGAAATCTAGGCAGTGGGGCTaGCCCTGGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTCCTC +
Preference number: 1 (lower is better)
Translates to: DSEVQARFEKSRQWG*PWMRPSLSTEPAFL
Trigger: GAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTGCCTAGATTTCTCAAATCTGGCTTGCACCTCAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 90 bp CACACAGGGGGCTGCTCTCAGAGGCTTGGAGCCCTGCGTGCAAACTaGCTTGGAGACACATGCATAAACAGCTCAAGGGGAGCTGACCAA +
Preference number: 1 (lower is better)
Translates to: HTGGCSQRLGALRAN*LGDTCINSSRGADQ
Trigger: TTGGTCAGCTCCCCTTGAGCTGTTTATGCATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCCCCCTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 90 bp GTGGCGGGTACTTCCGTAAGTACACATGCTGCCAGTCAATGCCCTTaGAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTCCTCCGC +
Preference number: 1 (lower is better)
Translates to: VAGTSVSTHAASQCP*RRCAPSTLVPLLLR
Trigger: GCGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAAGTACCCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp CCCAGAGCTACTGCCATAGCCCTTGGTGTTCTGGAGGCAGAGACTTaGCATGTAGGCCAGGCTAGCCTCAAACTCATAAGCCTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: PRATAIALGVLEAET*HVGQASLKLISLLP
Trigger: AGGCAGGAGGCTTATGAGTTTGAGGCTAGCCTGGCCTACATGGCAAGTCTCTGCCTCCAGAACACCAAGGGCTATGGCAGTAGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp GAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGTaGCTTCCATCAGCCAACCAAGCCTTCTCCCTCTGTCCTTACCCT +
Preference number: 1 (lower is better)
Translates to: ELPSFPPWWVIMPSV*LPSANQAFSLCPYP
Trigger: AGGGTAAGGACAGAGGGAGAAGGCTTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp CTGCTCTGTGGTTCAGAGGCCGCTGCTATTTCTGTGACACAGTGGTaGCTTGGAGAACTCCAGGATGGCGGCCCGTGGTTTGTTGAGGAA +
Preference number: 1 (lower is better)
Translates to: LLCGSEAAAISVTQW*LGELQDGGPWFVEE
Trigger: TTCCTCAACAAACCACGGGCCGCCATCCTGGAGTTCTCCAAGCCACCACTGTGTCACAGAAATAGCAGCGGCCTCTGAACCACAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp TATGTGCTCGGGACTTCATCTAGAGACCCAGTAACACTACCATACTaGCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGA +
Preference number: 1 (lower is better)
Translates to: YVLGTSSRDPVTLPY*PRPQGLRNWTSPPR
Trigger: TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTCTCTAGATGAAGTCCCGAGCACATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp TGGACAAGTCCACCGAGACCTTGCAGGACTTCTCATTGTGTGACATaGGGCCAGGCAGCAGCAGAGAAACCCACTTTTAAGGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: WTSPPRPCRTSHCVT*GQAAAEKPTFKGKG
Trigger: CCCCTTCCCCTTAAAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp CCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTaGACAAGTCCACCGAGACCTTGCAGGACTTCTCATTGTGTGACA +
Preference number: 1 (lower is better)
Translates to: PVTLPYCPRPQGLRN*TSPPRPCRTSHCVT
Trigger: TGTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp CACGCAGTCAAGTGGAACACACACAGGGGGCTGCTCTCAGAGGCTTaGAGCCCTGCGTGCAAACTGACTTGGAGACACATGCATAAACAG +
Preference number: 1 (lower is better)
Translates to: HAVKWNTHRGLLSEA*SPACKLTWRHMHKQ
Trigger: CTGTTTATGCATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCCCCCTGTGTGTGTTCCACTTGACTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 90 bp TTCCTGTACCGAGTTGCTCTGCCTCTCTGTCACACTGACCACTGGTaGACAATCCTGGCTAGTGGGGCCTCAGAACAGCTGCTTCTCACA +
Preference number: 1 (lower is better)
Translates to: FLYRVALPLCHTDHW*TILASGASEQLLLT
Trigger: TGTGAGAAGCAGCTGTTCTGAGGCCCCACTAGCCAGGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTCGGTACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 90 bp TCCATCAGCCAACCAAGCCTTCTCCCTCTGTCCTTACCCTACCACTaGAACGGTGAGTTCCTGTACCGAGTTGCTCTGCCTCTCTGTCAC +
Preference number: 1 (lower is better)
Translates to: SISQPSLLPLSLPYH*NGEFLYRVALPLCH
Trigger: GTGACAGAGAGGCAGAGCAACTCGGTACAGGAACTCACCGTTTCAGTGGTAGGGTAAGGACAGAGGGAGAAGGCTTGGTTGGCTGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 90 bp AGGTCCTGCTTGAAGTCTGTGCCCACCAGAAATGGCTGTGATGGATaGCGCGAAGTTTCCTCGAGGGGCATCCCTGGAAAGAAGTCATCA +
Preference number: 1 (lower is better)
Translates to: RSCLKSVPTRNGCDG*REVSSRGIPGKKSS
Trigger: TGATGACTTCTTTCCAGGGATGCCCCTCGAGGAAACTTCGCGGCATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp GAGTTGCTCTGCCTCTCTGTCACACTGACCACTGGTGAACAATCCTaGCTAGTGGGGCCTCAGAACAGCTGCTTCTCACAGACACATAGC +
Preference number: 1 (lower is better)
Translates to: ELLCLSVTLTTGEQS*LVGPQNSCFSQTHS
Trigger: GCTATGTGTCTGTGAGAAGCAGCTGTTCTGAGGCCCCACTAGCCAGGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp CTGCATGATGGGAACTCTCAAACAGCCATGTATCATAAACCCATCTaGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTAGCCAC +
Preference number: 1 (lower is better)
Translates to: LHDGNSQTAMYHKPI*LLLPPYGSRTHPSH
Trigger: GTGGCTAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGATACATGGCTGTTTGAGAGTTCCCATCATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp GATGGTCTCCACCACTTCTTGCTGCCAGCGCTCGGAGATCACCAGTaGGAAGTTCTTATAGAGGTCCTGGTCACAGTCCAACAGCTTAAT +
Preference number: 1 (lower is better)
Translates to: DGLHHFLLPALGDHQ*EVLIEVLVTVQQLN
Trigger: ATTAAGCTGTTGGACTGTGACCAGGACCTCTATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTGGAGACCATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp TGTGCGGTGAGACAGGCCCTGAGTCTCACAGGTCCCTCATGCACCTaGCGAGTAATGGACCCTCTCAGTAAATTATCTTCCAAATTCTCA +
Preference number: 1 (lower is better)
Translates to: CAVRQALSLTGPSCT*RVMDPLSKLSSKFS
Trigger: TGAGAATTTGGAAGATAATTTACTGAGAGGGTCCATTACTCGGCAGGTGCATGAGGGACCTGTGAGACTCAGGGCCTGTCTCACCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp TCTTGTCTATCTTGGGCACATCCTCAGATGCTCCCCAGGTCAAACTaGGGGATCAGGAGGACTCTGTCATACCTAACCATTGATGGTGAC +
Preference number: 1 (lower is better)
Translates to: SCLSWAHPQMLPRSN*GIRRTLSYLTIDGD
Trigger: GTCACCATCAATGGTTAGGTATGACAGAGTCCTCCTGATCCCCCAGTTTGACCTGGGGAGCATCTGAGGATGTGCCCAAGATAGACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp TTTAAAGTGCGTGGTTTCCCACTTTGGGAACATGGCACCTTCGGGTaGCTTGTAGGAGTGTTCACACCTGTGTCAGGAAACAACTCCGTC +
Preference number: 1 (lower is better)
Translates to: FKVRGFPLWEHGTFG*LVGVFTPVSGNNSV
Trigger: GACGGAGTTGTTTCCTGACACAGGTGTGAACACTCCTACAAGCCACCCGAAGGTGCCATGTTCCCAAAGTGGGAAACCACGCACTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 90 bp CTGTCTCAGTGTCCTGAATCCTGGGGCTGCCAGTCTGAGGTGCTGTaGTGCGTTCTCTCTTATTTGTCTAAGTTGACAAAAGCAACCAAC +
Preference number: 1 (lower is better)
Translates to: LSQCPESWGCQSEVL*CVLSYLSKLTKATN
Trigger: GTTGGTTGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCAGCCCCAGGATTCAGGACACTGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp GCCCGTGAGTGCACAGTCTGTCCTCTTCCTGCTTGGCCCTTGCCTTaGGAGATGTGTCTCAAGATCCTAAGATGTGAATCAGATAAAACA +
Preference number: 1 (lower is better)
Translates to: ARECTVCPLPAWPLP*EMCLKILRCESDKT
Trigger: TGTTTTATCTGATTCACATCTTAGGATCTTGAGACACATCTCCCAAGGCAAGGGCCAAGCAGGAAGAGGACAGACTGTGCACTCACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR GCA 90 bp TCTCAGTGTCCTGAATCCTGGGGCTGCCAGTCTGAGGTGCTGTGCTaGGTTCTCTCTTATTTGTCTAAGTTGACAAAAGCAACCAACAGA +
Preference number: 1 (lower is better)
Translates to: SQCPESWGCQSEVLC*VLSYLSKLTKATNR
Trigger: TCTGTTGGTTGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCAGCCCCAGGATTCAGGACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 90 bp GTCACCTGTTTCTTGGAGAGATGGCTCTGGACATGTTCTACAGCTTaGTTTGAGAATTGGTGTGTGCTGGATAGGAGCTCCCTCATGATG +
Preference number: 1 (lower is better)
Translates to: VTCFLERWLWTCSTA*FENWCVLDRSSLMM
Trigger: CATCATGAGGGAGCTCCTATCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp ACGAGAGACAGCATGATCCTCTCGTTCAAAGCCAGAGTCTCCCCCTaGTTCATCTTCACCCTTTTCTTGTCTAAGCACTTCATGGCATAC +
Preference number: 1 (lower is better)
Translates to: TRDSMILSFKARVSP*FIFTLFLSKHFMAY
Trigger: GTATGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGATGAAGCAGGGGGAGACTCTGGCTTTGAACGAGAGGATCATGCTGTCTCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 90 bp GGCTGGAAAAGTGTAGCCGTCACCTGTTTCTTGGAGAGATGGCTCTaGACATGTTCTACAGCTTGCTTTGAGAATTGGTGTGTGCTGGAT +
Preference number: 1 (lower is better)
Translates to: GWKSVAVTCFLERWL*TCSTACFENWCVLD
Trigger: ATCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 90 bp TGCAAACTGACTTGGAGACACATGCATAAACAGCTCAAGGGGAGCTaGCCAATTTCAGAGTATCAGATGACACACTACTCTGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: CKLTWRHMHKQLKGS*PISEYQMTHYSAAW
Trigger: CCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAAATTGGTCAGCTCCCCTTGAGCTGTTTATGCATGTGTCTCCAAGTCAGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 90 bp CTGTGTAAAAACAGCAATAAGTGGAACATCCTCCATCATGATAAGTaGTCCAGGCCAGAAACCCAGGTCACTAGTACTCATGACTCGCCC +
Preference number: 1 (lower is better)
Translates to: LCKNSNKWNILHHDK*SRPETQVTSTHDSP
Trigger: GGGCGAGTCATGAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGTTCCACTTATTGCTGTTTTTACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 90 bp CTTTCCCCTGTAGGTCACCATCCATCCTTCATTGCTGGTTTTACATaGACAGTTTGTAATGTCAGCCAATGGGCCTTTCAATGTGCACAC +
Preference number: 1 (lower is better)
Translates to: LSPVGHHPSFIAGFT*TVCNVSQWAFQCAH
Trigger: GTGTGCACATTGAAAGGCCCATTGGCTGACATTACAAACTGTCCATGTAAAACCAGCAATGAAGGATGGATGGTGACCTACAGGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 90 bp ATGTATGGCTGGAAAAGTGTAGCCGTCACCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACAGCTTGCTTTGAGAATTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: MYGWKSVAVTCFLER*LWTCSTACFENWCV
Trigger: CACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCAGCCATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 90 bp AGCCACTGTGCAAACTCGGGGTCACTCTCACATTGCAAGACAAATTaGTTCCCTCCCTTTATCCTGAGTAAGATGCACTTTCTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: SHCANSGSLSHCKTN*FPPFILSKMHFLSL
Trigger: TAAAGACAGAAAGTGCATCTTACTCAGGATAAAGGGAGGGAAGCAATTTGTCTTGCAATGTGAGAGTGACCCCGAGTTTGCACAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 90 bp TTGACAAAAGCAACCAACAGAGAAAATGCTAATGTCCACCAAGAATaGAGAAGAGGCTTTGGGCTCATCCTTCTTCATTCCCATAGCAAC +
Preference number: 1 (lower is better)
Translates to: LTKATNRENANVHQE*RRGFGLILLHSHSN
Trigger: GTTGCTATGGGAATGAAGAAGGATGAGCCCAAAGCCTCTTCTCCATTCTTGGTGGACATTAGCATTTTCTCTGTTGGTTGCTTTTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCAGTTCCACTCCTGGGCTaGAGAGCTGGGGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPVPLLG*RAGAPP
Trigger: AGGAGGGGCCCCAGCTCTTCAGCCCAGGAGTGGAAC...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CAA 90 bp TCCCAGCTCCCAGAAGGCCGCCCTGGTGTCCTGAGCCTCCTCGGCTaGGAGCAGCCCCGTCAGTGCTCAGAAACACTGTGTCTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: SQLPEGRPGVLSLLG*EQPRQCSETLCLSP
Trigger: GGGGCTAAGACACAGTGTTTCTGAGCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAGGACACCAGGGCGGCCTTCTGGGAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCACTCCCCAGGTCAAACTaGGGGATCAGGAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPLPRSN*GIRRTL
Trigger: CAGAGTCCTCCTGATCCCCCAGTTTGACCTGGGGAG...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp GACCCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAGTTCCACTCCTGGGCTaGAGAGCTGGGGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: DPVTLPYCPRPQGLRNWTVPLLG*RAGAPP
Trigger: AGGAGGGGCCCCAGCTCTTCAGCCCAGGAGTGGAAC...TGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CCTCCGCAGCCCAGCCGCTGGCTCACGTCCCGCTGGAGCAAACCCTCTAAGAGGCTCGAGGGGCATCCCTaGAAAGAAGTCATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: PPQPSRWLTSRWSKPSKRLEGHP*KEVIRG
Trigger: TCCTCTGATGACTTCTTTCCAGGGATGCCCCTCGAG...CCTCTTAGAGGGTTTGCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CTCCACCACTTCTTGCTGCCAGCGCTCGGAGATCACCAGTGGGAAGTTCTTATACCGCAGCCCAGCCGCTaGCTCACGTCCCGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LHHFLLPALGDHQWEVLIPQPSR*LTSRWS
Trigger: GCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGG...TATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 90 bp GGCTTGGAGAACTCCAGGATGGCGGCCCGTGGTTTGTTGAGGAATTaGGGGGCACGGCGCAGCAGTCTCTGGGCCTCATTGAAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GLENSRMAARGLLRN*GARRSSLWASLKVQ
Trigger: CTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCGCCATCCTGGAGTTCTCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACGCAAGGAGTCAGCCCTaGCCTACAGAGACCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHARSQP*PTETLL
Trigger: GAGGAGGGTCTCTGTAGGTCAGGGCTGACTCCTTGC...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACTCCCCAGGTCAAACTaGGGGATCAGGAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: LPYCPRPQGLRNWTSPPRLPRSN*GIRRTL
Trigger: CAGAGTCCTCCTGATCCCCCAGTTTGACCTGGGGAG...TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp GACCCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACATGCCTGAAGGGGCTGTaGCCCCGCAGAAGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: DPVTLPYCPRPQGLRNWTCLKGL*PRRSLK
Trigger: CTTCAAGCTTCTGCGGGGCCACAGCCCCTTCAGGCA...TGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 90 bp GTGTCTTCCTCATCGAAGGAGCCGATATCGAAGGCATCTGCAGCGTaGACCTCTCCCCGAGGAGGGATTAGGGGTGGCGGGTACTTCCGT +
Preference number: 2 (lower is better)
Translates to: VSSSSKEPISKASAA*TSPRGGIRGGGYFR
Trigger: ACGGAAGTACCCGCCACCCCTAATCCCTCCTCGGGGAGAGGTCAACGCTGCAGATGCCTTCGATATCGGCTCCTTCGATGAGGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp TCAATGCCCTTGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTCCTCCGGCTTCGTTCCACTCCTaGGCTGAAGAGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: SMPLKKMCSFNSRAPPPPASFHS*AEELGP
Trigger: GGGCCCCAGCTCTTCAGCCCAGGAGTGGAACGAAGC...CGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 90 bp CGCCATGCATTGGGGGCACTGTCTGGTGGGTTACCTAGGTCCTGCTaGAAGTCTGTGCCCACCAGAAATGGCTGTGATGGATGCCGCGAA +
Preference number: 2 (lower is better)
Translates to: RHALGALSGGLPRSC*KSVPTRNGCDGCRE
Trigger: TTCGCGGCATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCAATGCATGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp TGGAGCAAACCCTCTAAGAGGGACCTCAGCTCAGGGGAGAAGGCATCTGGAAGCGGACTTCTCATTGTGTaGCATGGGGCCAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: WSKPSKRDLSSGEKASGSGLLIV*HGARQQ
Trigger: CTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCC...GCTTCCAGATGCCTTCTCCCCTGAGCTGAGGTCCCTCTTAGAGGGTTTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACCCCTCCCTGCAGGTCTaGCTGAGCATGTGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHPSLQV*LSMCEL
Trigger: CAGCTCACACATGCTCAGTCAGACCTGCAGGGAGGG...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp TGCCAGTCAATGCCCTTGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTGGCCCCGCAGAAGCTTaGAGAGCATACAGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: CQSMPLKKMCSFNSRAPPGPAEA*RAYSPG
Trigger: CCCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCC...AGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGGTAACACTACCATACTaGCCCCGCCCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVVTLPY*PRPQGL
Trigger: GAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTAC...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCAGACCATTTTACGTTCTaGGTCCCTGGATACCAAAGT +
Preference number: 2 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPDHFTF*VPGYQS
Trigger: ACTTTGGTATCCAGGGACCCAGAACGTAAAATGGTC...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCAAACTCTTGTCTATCTTaGGCACATCCTCAGATGCTC +
Preference number: 2 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPNSCLS*AHPQML
Trigger: GAGCATCTGAGGATGTGCCCAAGATAGACAAGAGTT...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACCAATGTGGAAGGGGTaGGGGGAGGTCTCTATATGT +
Preference number: 2 (lower is better)
Translates to: LPYCPRPQGLRNWTSPPRPMWKG*GEVSIC
Trigger: ACATATAGAGACCTCCCCCCACCCCTTCCACATTGG...TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CAA 90 bp CCCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATaGGACAAGTCCACCGAGACCTTGCAGGACTTCTCATTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: PSNTTILPPPPRPQE*DKSTETLQDFSLCD
Trigger: GTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CAA 90 bp GGTGGCGGGTACTTCCGTAAGTACACATGCTGCCAGTCAATGCCCTaGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTCCTCCG +
Preference number: 2 (lower is better)
Translates to: GGGYFRKYTCCQSMP*KKMCSFNSRAPPPP
Trigger: CGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAAGTACCCGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp CAGTGGGGCTGGCCCTGGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTCCTCCCAGGATCACATATATaGATGTCAGTCAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: QWGWPWMRPSLSTEPAFLPGSHI*MSVSPQ
Trigger: TTGGGGACTGACTGACATTCATATATGTGATCCTGG...GAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR GCA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACAACCCAGAATTCATGTaGGGTGAGACAGGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHNPEFM*GETGPE
Trigger: CTCAGGGCCTGTCTCACCGCACATGAATTCTGGGTT...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CCCGCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAGCTTCGTTCCACTCCTaGGCTGAAGAGCTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: PAVHTLWELNPESWRCKAASFHS*AEELGP
Trigger: GGGCCCCAGCTCTTCAGCCCAGGAGTGGAACGAAGC...TGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp CCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACCTTGCAGGACTTCTCATCTCATTGTGTGACATaGGGCCAGGCAGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: PPRPQELDKSTETLQDFSSHCVT*GQAAAE
Trigger: CTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGA...TGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp GACCCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACACCCTGGATACCAAAGTaGGAGAGTTGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: DPVTLPYCPRPQGLRNWTPWIPK*ESCTAE
Trigger: TTCTGCTGTGCAACTCTCTCACTTTGGTATCCAGGG...TGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp GTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGTACCTAGGTCCTGCTTaGAGTCTGTGCCCACCAGAA +
Preference number: 2 (lower is better)
Translates to: VSLELPSFPPWWVIMPSVYLGPA*SLCPPE
Trigger: TTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTA...CACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTAGGACTTCTCATTGTGTaGCATGGGGCCAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLGLLIV*HGARQQ
Trigger: CTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCC...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACGTCTTTGCCACTGTGTaGGAAAGGGGTTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHVFATV*ERGSPA
Trigger: AGCTGGGGAACCCCTTTCTCACACAGTGGCAAAGAC...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CCCGCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAGTAACACTACCATACTaGCCCCGCCCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: PAVHTLWELNPESWRCKAVTLPY*PRPQGL
Trigger: GAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTAC...TGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR GCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGCTCACAGGTCCCTCATaGACCTGCCGAGTAATGGAC +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVLTGPS*TCRVMD
Trigger: GTCCATTACTCGGCAGGTGCATGAGGGACCTGTGAG...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CGGCGCAGCAGTCTCTGGGCCTCATTGAAGGTGCAGGTCAGCTCCTTCAGCCACAACTCTTGTCTATCTTaGGCACATCCTCAGATGCTC +
Preference number: 2 (lower is better)
Translates to: RRSSLWASLKVQVSSFSHNSCLS*AHPQML
Trigger: GAGCATCTGAGGATGTGCCCAAGATAGACAAGAGTT...GTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp ACAGCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTGCGGTGAGACAGGCCCCTCATTCCCTCCTTaGTGGGTCATCATGCCAAGT +
Preference number: 2 (lower is better)
Translates to: TAALCVIMNPEFMCGETGPSFPP*WVIMPS
Trigger: ACTTGGCATGATGACCCACCAAGGAGGGAATGAGGG...GCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGATTGGAGAGATGGCTCTaGACATGTTCTACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: LPYCPRPQGLRNWTSPPRLERWL*TCSTAC
Trigger: GCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAA...TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGAATTTCTGTGACACAGTaGTGGCTTGGAGAACTCCAG +
Preference number: 2 (lower is better)
Translates to: LPYCPRPQGLRNWTSPPRISVTQ*WLGELQ
Trigger: CTGGAGTTCTCCAAGCCACCACTGTGTCACAGAAAT...TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CTCCACCACTTCTTGCTGCCAGCGCTCGGAGATCACCAGTGGGAAGTTCTTATACTCACAGGTCCCTCATaGACCTGCCGAGTAATGGAC +
Preference number: 2 (lower is better)
Translates to: LHHFLLPALGDHQWEVLILTGPS*TCRVMD
Trigger: GTCCATTACTCGGCAGGTGCATGAGGGACCTGTGAG...TATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACCTTGCAGGACTTCTCAAGGCATCTAGGGACTTaGCTGCATGATGGGAACTCT +
Preference number: 2 (lower is better)
Translates to: PPRPQELDKSTETLQDFSRHLGT*LHDGNS
Trigger: AGAGTTCCCATCATGCAGGCAAGTCCCTAGATGCCT...TGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CTCCACCACTTCTTGCTGCCAGCGCTCGGAGATCACCAGTGGGAAGTTCTTATAAGAACCAGTCGGCGCTaGTGTCATAGCACGTTCCCT +
Preference number: 2 (lower is better)
Translates to: LHHFLLPALGDHQWEVLIRTSRR*CHSTFP
Trigger: AGGGAACGTGCTATGACAGCAGCGCCGACTGGTTCT...TATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTTCATGGGTGCCCACGCTaGCATGAGGCTTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: QDFSLCDMGPGSSRETHFHGCPR*HEASFW
Trigger: CCAAAAAGAAGCCTCATGCCAGCGTGGGCACCCATG...AAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAAGAGCAAGGAGTCAGCCCTaGCCTACAGAGACCCTCCTC +
Preference number: 2 (lower is better)
Translates to: AVHTLWELNPESWRCKARARSQP*PTETLL
Trigger: GAGGAGGGTCTCTGTAGGTCAGGGCTGACTCCTTGC...TCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp CTTCTTGCTGCCAGCGCTCGGAGATCACCAGTGGGAAGTTCTTATAGAGGTCCTTACCTAGGTCCTGCTTaGAGTCTGTGCCCACCAGAA +
Preference number: 2 (lower is better)
Translates to: LLAASARRSPVGSSYRGPYLGPA*SLCPPE
Trigger: TTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTA...AGGACCTCTATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACACCCACGCAGTCAAGTaGAACACACACAGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHTHAVK*NTHRGL
Trigger: CAGCCCCCTGTGTGTGTTCCACTTGACTGCGTGGGT...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACCCGTCACCTGTTTCTTaGAGAGATGGCTCTGGACAT +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHPSPVS*RDGSGH
Trigger: ATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGG...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp CCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACCTTGCAGGACTTCTCACATGAGGCTTCTTTTTaGAGAAATCGCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: PPRPQELDKSTETLQDFSHEASF*RNRRQG
Trigger: GCCTTGCCTGCGATTTCTCCAAAAAGAAGCCTCATG...TGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp AGGGATGGCATAGGTTTCTGTTTCCTGGAAGGACTCAGACTATTAGAAGCCGAGCCCTGCAGGTCTGACTaGGCATGTGTGAGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: RDGIGFCFLEGLRLLEAEPCRSD*ACVSCP
Trigger: TGGACAGCTCACACATGCTCAGTCAGACCTGCAGGG...CTCGGCTTCTAATAGTCTGAGTCCTTCCAGGAAACAGAAACCTATGCCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp ACAGCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTGCGGTGAGACAGGCTCGTTCATGCTCAGGTaGATATTCAACTCCACGTTC +
Preference number: 2 (lower is better)
Translates to: TAALCVIMNPEFMCGETGSFMLR*IFNSTF
Trigger: GAACGTGGAGTTGAATATTCACCTGAGCATGAACGA...GCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTTACTCGGACACAGCAATaGCTAGAACAGGCCACCATA +
Preference number: 2 (lower is better)
Translates to: QDFSLCDMGPGSSRETHFTRTQQ*LEQATI
Trigger: TATGGTGGCCTGTTCTAGGCATTGCTGTGTCCGAGT...AAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp TGTGATGGATGCCGCGAAGTTTCCTCGAGGGGCATCCCTGGAAAGAAGTCATCAACTCGGACACAGCAATaGCTAGAACAGGCCACCATA +
Preference number: 2 (lower is better)
Translates to: CDGCREVSSRGIPGKKSSTRTQQ*LEQATI
Trigger: TATGGTGGCCTGTTCTAGGCATTGCTGTGTCCGAGT...TGATGACTTCTTTCCAGGGATGCCCCTCGAGGAAACTTCGCGGCATCCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTTCGGTGTCTGCTTTCCTaGAGCCATAAACTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: QDFSLCDMGPGSSRETHFRCLLS*SHKLPQ
Trigger: TTGGGGAAGTTTATGGCTGCAGGAAAGCAGACACCG...AAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTCCGTAAGTACACATaGTGCCAGTCAATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHFRKYT*CQSMPL
Trigger: CAAGGGCATTGACTGGCAGCATGTGTACTTACGGAA...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGTATCATAAACCCATCTaGCTCCTCCTCCCACCCTAT +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVYHKPI*LLLPPY
Trigger: ATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGATA...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp TTTGTGTGTATGTGTGTGTTACCTACAAAGCAAGTCACACCTCTAGCATCCCATCAGTGGGGCTGGCCCTaGATGAGGCCGAGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: FVCMCVLPTKQVTPLASHQWGWP*MRPSLS
Trigger: GCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTG...ATGGGATGCTAGAGGTGTGACTTGCTTTGTAGGTAACACACACATACACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CCA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACTTTCTGTCTTTAATCTaGGTCTCCTCCACAGACATG +
Preference number: 2 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHFLSLI*VSSTDM
Trigger: CATGTCTGTGGAGGAGACCCAGATTAAAGACAGAAA...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 90 bp ATCAGTATCAGCATTGACGGCGTCATAGATGGTCTCCACCACTTCTaGCTGCCAGCGCTCGGAGATCACCAGTGGGAAGTTCTTATAGAG +
Preference number: 2 (lower is better)
Translates to: ISISIDGVIDGLHHF*LPALGDHQWEVLIE
Trigger: CTCTATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTGGAGACCATCTATGACGCCGTCAATGCTGATACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGTTCTACAGCTTGCTTTaGGAATTGGTGTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVFYSLL*ELVCAG
Trigger: TCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAA...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAAGATCTCATTGTGTGACATaGGGCCAGGCAGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: AVHTLWELNPESWRCKARSHCVT*GQAAAE
Trigger: CTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGA...TCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACGCCAATAATAACACATaGTATTTGTGCCAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHANNNT*YLCQSG
Trigger: GCCAGACTGGCACAAATATCATGTGTTATTATTGGC...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp ACAGCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTGCGGTGAGACAGGCTTGGACTTTGTGCATTaGTTCTTGCCTTATGAAACC +
Preference number: 2 (lower is better)
Translates to: TAALCVIMNPEFMCGETGLDFVH*FLPYET
Trigger: GGTTTCATAAGGCAAGAATCAATGCACAAAGTCCAA...GCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGACAGCAGAATGCCTCTaGTTCTTCAGTAATTTCGAG +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVTAECL*FFSNFE
Trigger: CTCGAAATTACTGAAGAAGCAGAGGCATTCTGCTGT...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp TCAGATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAATTCATTAAGAGTCTGTCCTCTTCCTaGTTGGCCCTTGCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SDDTLLCSLETQGDEFIKSLSSS*LALALG
Trigger: TCCCAAGGCAAGGGCCAAGCAGGAAGAGGACAGACT...CTTAATGAATTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR TCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCCCCTGGATACCAAAGTaGGAGAGTTGCACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLPWIPK*ESCTAE
Trigger: TTCTGCTGTGCAACTCTCTCACTTTGGTATCCAGGG...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp TCCTGTACCGAGTTGCTCTGCCTCTCTGTCACACTGACCACTGGTGAACAATCCGAACACAAAGAATTCTaGTGTCAGGTTATGTGCTCG +
Preference number: 2 (lower is better)
Translates to: SCTELLCLSVTLTTGEQSEHKEF*CQVMCS
Trigger: CGAGCACATAACCTGACAGCAGAATTCTTTGTGTTC...GGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTCGGTACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp TTGCAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTGTCTAAGCACTTCATaGCATACATTTTACCGGTGT +
Preference number: 2 (lower is better)
Translates to: LQDFSLCDMGPGSSRETHCLSTS*HTFYRC
Trigger: ACACCGGTAAAATGTATGCCATGAAGTGCTTAGACA...GTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGCCAGACATAAAAGCTTaGGAAGTAAGGACCATTTTA +
Preference number: 2 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVPDIKA*EVRTIL
Trigger: TAAAATGGTCCTTACTTCTCAAGCTTTTATGTCTGG...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACTTTCAGAGTATCAGATaGCACACTACTCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHFQSIR*HTTLQP
Trigger: AGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAAA...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR TCA 90 bp AGTAATTTACTTACCTATAACTTGAACTGTTTTCATACCCTAGGGTGTGTGTGGGCCGAGTCTCAGCACTaGGCCAGCATTCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SNLLTYNLNCFHTLGCVWAESQH*ASIPPW
Trigger: CCAGGGAGGAATGCTGGCTCAGTGCTGAGACTCGGC...CCACACACACCCTAGGGTATGAAAACAGTTCAAGTTATAGGTAAGTAAATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR GCA 90 bp ATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCTGGTGACAGCAGAATGCCTCTaGTTCTTCAGTAATTTCGAG +
Preference number: 2 (lower is better)
Translates to: IDGDSKFMHAMHWGHCLVTAECL*FFSNFE
Trigger: CTCGAAATTACTGAAGAAGCAGAGGCATTCTGCTGT...CACCAGACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CTAACCATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTATCAGAGGAAGGAAGTaGACACGATACTCAGGGTTA +
Preference number: 2 (lower is better)
Translates to: LTIDGDSKFMHAMHWGHCIRGRK*TRYSGL
Trigger: TAACCCTGAGTATCGTGTGCACTTCCTTCCTCTGAT...ACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAATGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACAATGCACGCCATGCATTaGGGGCACTGTCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTMHAMH*GHCLVG
Trigger: ACCCACCAGACAGTGCCCCCAATGCATGGCGTGCAT...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp CAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTTGATTTCTTCTATGTATaGCTGGAAAAGTGTAGCCGT +
Preference number: 2 (lower is better)
Translates to: QDFSLCDMGPGSSRETHFDFFYV*LEKCSR
Trigger: ACGGCTACACTTTTCCAGCCATACATAGAAGAAATC...AAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR GCA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACACATGGACTCTGAGGTaGAAGCCAGATTTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHTWTLR*KPDLRN
Trigger: ATTTCTCAAATCTGGCTTGCACCTCAGAGTCCATGT...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCTCTTCTATGTATGGCTaGAAAAGTGTAGCCGTCACC +
Preference number: 2 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLSSMYG*KSVAVT
Trigger: GGTGACGGCTACACTTTTCCAGCCATACATAGAAGA...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACA +
Preference number: 2 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLCFLER*LWTCST
Trigger: TGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACA...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR TCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCTTGGACTTTGTGCATTaGTTCTTGCCTTATGAAACC +
Preference number: 2 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLLDFVH*FLPYET
Trigger: GGTTTCATAAGGCAAGAATCAATGCACAAAGTCCAA...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CCA 90 bp TCTTCACCCTTTTCTTGTCTAAGCACTTCATGGCATACATTTTACCGGTGTCTGGCTTGCTTTGAGAATTaGTGTGTGCTGGATAGGAGC +
Preference number: 2 (lower is better)
Translates to: SSPFSCLSTSWHTFYRCLACFEN*CVLDRS
Trigger: GCTCCTATCCAGCACACACCAATTCTCAAAGCAAGC...CAGACACCGGTAAAATGTATGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 90 bp TGCCAGTCTGAGGTGCTGTGCTGCGTTCTCTCTTATTTGTCTAAGTaGACAAAAGCAACCAACAGAGAAAATGCTAATGTCCACCAAGAA +
Preference number: 2 (lower is better)
Translates to: CQSEVLCCVLSYLSK*TKATNRENANVHQE
Trigger: TTCTTGGTGGACATTAGCATTTTCTCTGTTGGTTGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp AGGGATGGCATAGGTTTCTGTTTCCTGGAAGGACTCAGACTATTAGAAGCCGAGGGCTCTAAAATTATCTaGTATTCTTGGACTTTGTGC +
Preference number: 2 (lower is better)
Translates to: RDGIGFCFLEGLRLLEAEGSKII*YSWTLC
Trigger: GCACAAAGTCCAAGAATATCAGATAATTTTAGAGCC...CTCGGCTTCTAATAGTCTGAGTCCTTCCAGGAAACAGAAACCTATGCCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp AAGAAGCAGAAATACAGATGGTTTCCATGGGAACGCACATACGGATTCAATAAAGCGGTGATGCCATTCTaGGGTTCACCACATCTAAGT +
Preference number: 2 (lower is better)
Translates to: KKQKYRWFPWERTYGFNKAVMPF*GSPHLS
Trigger: ACTTAGATGTGGTGAACCTCAGAATGGCATCACCGC...TTTATTGAATCCGTATGTGCGTTCCCATGGAAACCATCTGTATTTCTGCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp AGGGATGGCATAGGTTTCTGTTTCCTGGAAGGACTCAGACTATTAGAAGCCGAGATTGCTGGTTTTACATaGACAGTTTGTAATGTCAGC +
Preference number: 2 (lower is better)
Translates to: RDGIGFCFLEGLRLLEAEIAGFT*TVCNVS
Trigger: GCTGACATTACAAACTGTCCATGTAAAACCAGCAAT...CTCGGCTTCTAATAGTCTGAGTCCTTCCAGGAAACAGAAACCTATGCCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR GCA 90 bp AGGGATGGCATAGGTTTCTGTTTCCTGGAAGGACTCAGACTATTAGAAGCCGAGTATTCTTGGACTTTGTaGATTGATTCTTGCCTTATG +
Preference number: 2 (lower is better)
Translates to: RDGIGFCFLEGLRLLEAEYSWTL*IDSCLM
Trigger: CATAAGGCAAGAATCAATGCACAAAGTCCAAGAATA...CTCGGCTTCTAATAGTCTGAGTCCTTCCAGGAAACAGAAACCTATGCCATCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR GCA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACACCATCCATCCTTCATTaGTGGTTTTACATGGACAGT +
Preference number: 2 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTPSILH*WFYMDS
Trigger: ACTGTCCATGTAAAACCAGCAATGAAGGATGGATGG...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR TCA 90 bp AAGAAGCAGAAATACAGATGGTTTCCATGGGAACGCACATACGGATTCAATAAAGCCAATAATAACACATaGTATTTGTGCCAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: KKQKYRWFPWERTYGFNKANNNT*YLCQSG
Trigger: GCCAGACTGGCACAAATATCATGTGTTATTATTGGC...TTTATTGAATCCGTATGTGCGTTCCCATGGAAACCATCTGTATTTCTGCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CCA 90 bp TTTGTGTGTATGTGTGTGTTACCTACAAAGCAAGTCACACCTCTAGCATCCCATATCATCCTTGTAAAATaGAAGTTCTCCAGACTGTCT +
Preference number: 2 (lower is better)
Translates to: FVCMCVLPTKQVTPLASHIILVK*KFSRLS
Trigger: AGACAGTCTGGAGAACTTCCATTTTACAAGGATGAT...ATGGGATGCTAGAGGTGTGACTTGCTTTGTAGGTAACACACACATACACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp AGCCCCGAGGATGTCCCAGCTCCCAGAAGGCCGCCCTaGTGTCCTGAGCCTCCTCGGCTTGGAGCAGCCCCG +
Preference number: 3 (lower is better)
Translates to: SPEDVPAPRRPP*CPEPPRLGAAP
Trigger: CGGGGCTGCTCCAAGCCGAGGAGGCTCAGGACACCAGGGCGGCCTTCTGGGAGCTGGGACATCCTCGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp CCTCCTCCGCAGCCCAGCCGCTGGCTCACGTCCCGCTaGAGCAAACCCTCTAAGAGGGACCTCAGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: PPPQPSRWLTSR*SKPSKRDLSSG
Trigger: CCCTGAGCTGAGGTCCCTCTTAGAGGGTTTGCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGGAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACTGAGCCTCCTCGGCTaGGAGCAGCCCCGTCAGTGC +
Preference number: 3 (lower is better)
Translates to: LPYCPRPQGLRNWTSPPRLSLLG*EQPRQC
Trigger: GCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAG...TCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp CAGTGGGGCTGGCCCTGGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTCCTCGCTGCTCTCAGAGGCTaGGAGCCCTGCGTGCAAACT +
Preference number: 3 (lower is better)
Translates to: QWGWPWMRPSLSTEPAFLAALRG*EPCVQT
Trigger: AGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGC...GAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp CAGTGGTGGCTTGGAGAACTCCAGGATGGCGGCCCGTaGTTTGTTGAGGAATTTGGGGGCACGGCGCAGCAG +
Preference number: 3 (lower is better)
Translates to: QWWLGELQDGGP*FVEEFGGTAQQ
Trigger: CTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCGCCATCCTGGAGTTCTCCAAGCCACCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp CATCGAAGGAGCCGATATCGAAGGCATCTGCAGCGTTaGCCTCTCCCCGAGGAGGGATTAGGGGTGGCGGGT +
Preference number: 3 (lower is better)
Translates to: HRRSRYRRHLQR*PLPEEGLGVAG
Trigger: ACCCGCCACCCCTAATCCCTCCTCGGGGAGAGGTCAACGCTGCAGATGCCTTCGATATCGGCTCCTTCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp GTCCTGAGCCTCCTCGGCTTGGAGCAGCCCCGTCAGTaGTCAGAAACACTGTGTCTTAGCCCCACACGGTTC +
Preference number: 3 (lower is better)
Translates to: VLSLLGLEQPRQ*SETLCLSPTRF
Trigger: GAACCGTGTGGGGCTAAGACACAGTGTTTCTGAGCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACTATGCACGCCATGCATaGGGGGCACTGTCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHYARHA*GALSGG
Trigger: CCCACCAGACAGTGCCCCCAATGCATGGCGTGCATA...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp ATTTGGGGGCACGGCGCAGCAGTCTCTGGGCCTCATTaGAGGTGCAGGTCAGCTCCTTCAGCCACTGTGCAA +
Preference number: 3 (lower is better)
Translates to: IWGHGAAVSGPH*RCRSAPSATVQ
Trigger: TTGCACAGTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp ACCCCTACACCTCAGGCAGGCACTCGGACACAGCAATaGCTAGAACAGGCCACCATAGTCCCAGAGACCGTG +
Preference number: 3 (lower is better)
Translates to: TPTPQAGTRTQQ*LEQATIVPETV
Trigger: CACGGTCTCTGGGACTATGGTGGCCTGTTCTAGGCATTGCTGTGTCCGAGTGCCTGCCTGAGGTGTAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR GCA 72 bp GCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTaGGGTGAGACAGGCCCTGAGTCTCACAGGTCCCTC +
Preference number: 3 (lower is better)
Translates to: AALCVIMNPEFM*GETGPESHRSL
Trigger: GAGGGACCTGTGAGACTCAGGGCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp GGCGTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTaGGTCATCATGCCAAGTGTGTGGCTTCCATCAGCC +
Preference number: 3 (lower is better)
Translates to: GVSLELPSFPPW*VIMPSVWLPSA
Trigger: GGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CAA 90 bp GGGCCCCTCCTTCAGGCCCCGCTGCTCTGTGGTTCAGAGGCCGCTGCTATTTCTACCAAAGTGAGAGAGTaGCACAGCAGAATGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GPLLQAPLLCGSEAAAISTKVRE*HSRMPL
Trigger: CAGAGGCATTCTGCTGTGCAACTCTCTCACTTTGGT...AGAAATAGCAGCGGCCTCTGAACCACAGAGCAGCGGGGCCTGAAGGAGGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp CGGCGCAGCAGTCTCTGGGCCTCATTGAAGGTGCAGGTCAGCTCCTTCAGCCACTTACCTAGGTCCTGCTaGAAGTCTGTGCCCACCAGA +
Preference number: 3 (lower is better)
Translates to: RRSSLWASLKVQVSSFSHLPRSC*KSVPTR
Trigger: TCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAA...GTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp GTCCTGCTTGAAGTCTGTGCCCACCAGAAATGGCTGTaGTGGATGCCGCGAAGTTTCCTCGAGGGGCATCCC +
Preference number: 3 (lower is better)
Translates to: VLLEVCAHQKWL*WMPRSFLEGHP
Trigger: GGGATGCCCCTCGAGGAAACTTCGCGGCATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp GATTTGAGAAATCTAGGCAGTGGGGCTGGCCCTGGATaGGGCCGAGTCTCAGCACTGAGCCAGCATTCCTCC +
Preference number: 3 (lower is better)
Translates to: DLRNLGSGAGPG*GRVSALSQHSS
Trigger: GGAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTGCCTAGATTTCTCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp CTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTaGACAAGTCCACCGAGACCTTGCAGGACTTCTCAT +
Preference number: 3 (lower is better)
Translates to: LPYCPRPQGLRN*TSPPRPCRTSH
Trigger: ATGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp GGCAAGACCTTGGCCCAGAGCTACTGCCATAGCCCTTaGTGTTCTGGAGGCAGAGACTTGCCATGTAGGCCA +
Preference number: 3 (lower is better)
Translates to: GKTLAQSYCHSP*CSGGRDLPCRP
Trigger: TGGCCTACATGGCAAGTCTCTGCCTCCAGAACACCAAGGGCTATGGCAGTAGCTCTGGGCCAAGGTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp GAGGGCGTGTCCCTTGAGCTCCCCTCATTCCCTCCTTaGTGGGTCATCATGCCAAGTGTGTGGCTTCCATCA +
Preference number: 3 (lower is better)
Translates to: EGVSLELPSFPP*WVIMPSVWLPS
Trigger: TGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACACGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp GCCAGATTTGAGAAATCTAGGCAGTGGGGCTGGCCCTaGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTC +
Preference number: 3 (lower is better)
Translates to: ARFEKSRQWGWP*MRPSLSTEPAF
Trigger: GAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTGCCTAGATTTCTCAAATCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp TTGTTGAGGAATTTGGGGGCACGGCGCAGCAGTCTCTaGGCCTCATTGAAGGTGCAGGTCAGCTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: LLRNLGARRSSL*ASLKVQVSSFS
Trigger: GCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TCAATGCCCTTGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTCCTCCGCCAAGGCCTCAGGAATaGGACAAGTCCACCGAGACC +
Preference number: 3 (lower is better)
Translates to: SMPLKKMCSFNSRAPPPPPRPQE*DKSTET
Trigger: GGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGG...CGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGGGTTTGTTGAGGAATTaGGGGGCACGGCGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVGLLRN*GARRSS
Trigger: ACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACC...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp CGAGTTGCTCTGCCTCTCTGTCACACTGACCACTGGTaGACAATCCTGGCTAGTGGGGCCTCAGAACAGCTG +
Preference number: 3 (lower is better)
Translates to: RVALPLCHTDHW*TILASGASEQL
Trigger: CAGCTGTTCTGAGGCCCCACTAGCCAGGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp GGTGAACAATCCTGGCTAGTGGGGCCTCAGAACAGCTaGTTCTCACAGACACATAGCCAAGGTCAAGGCGGC +
Preference number: 3 (lower is better)
Translates to: GEQSWLVGPQNS*FSQTHSQGQGG
Trigger: GCCGCCTTGACCTTGGCTATGTGTCTGTGAGAAGCAGCTGTTCTGAGGCCCCACTAGCCAGGATTGTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp CACAGGGGGCTGCTCTCAGAGGCTTGGAGCCCTGCGTaGAAACTGACTTGGAGACACATGCATAAACAGCTC +
Preference number: 3 (lower is better)
Translates to: HRGLLSEAWSPA*KLTWRHMHKQL
Trigger: GAGCTGTTTATGCATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCCCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR GCA 72 bp AGGGACCTCAGCTCAGGGGAGAAGGCATCTGGAAGCTaGACGTTCACGGTCAGGGTCATTCGGTCTATCTCA +
Preference number: 3 (lower is better)
Translates to: RDLSSGEKASGS*TFTVRVIRSIS
Trigger: TGAGATAGACCGAATGACCCTGACCGTGAACGTGCAGCTTCCAGATGCCTTCTCCCCTGAGCTGAGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 72 bp AAGTGGAACACACACAGGGGGCTGCTCTCAGAGGCTTaGAGCCCTGCGTGCAAACTGACTTGGAGACACATG +
Preference number: 3 (lower is better)
Translates to: KWNTHRGLLSEA*SPACKLTWRHM
Trigger: CATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCCCCCTGTGTGTGTTCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp TCTGAGGTGCAAGCCAGATTTGAGAAATCTAGGCAGTaGGGCTGGCCCTGGATGAGGCCGAGTCTCAGCACT +
Preference number: 3 (lower is better)
Translates to: SEVQARFEKSRQ*GWPWMRPSLST
Trigger: AGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTGCCTAGATTTCTCAAATCTGGCTTGCACCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CAA 90 bp TCTTCTATGTATGGCTGGAAAAGTGTAGCCGTCACCTGTTTCTTGGAGAGATGGCTGAGCCTCCTCGGCTaGGAGCAGCCCCGTCAGTGC +
Preference number: 3 (lower is better)
Translates to: SSMYGWKSVAVTCFLERWLSLLG*EQPRQC
Trigger: GCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAG...CCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCAGCCATACATAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp GTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGTTACCTAGGTCCTGCTaGAAGTCTGTGCCCACCAGA +
Preference number: 3 (lower is better)
Translates to: VSLELPSFPPWWVIMPSVLPRSC*KSVPTR
Trigger: TCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAA...CACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 72 bp TGGGGGCACTGTCTGGTGGGTTACCTAGGTCCTGCTTaGAGTCTGTGCCCACCAGAAATGGCTGTGATGGAT +
Preference number: 3 (lower is better)
Translates to: WGHCLVGYLGPA*SLCPPEMAVMD
Trigger: ATCCATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp CAAGTCCACCGAGACCTTGCAGGACTTCTCATTGTGTaGCATGGGGCCAGGCAGCAGCAGAGAAACCCACTT +
Preference number: 3 (lower is better)
Translates to: QVHRDLAGLLIV*HGARQQQRNPL
Trigger: AAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp GGCTGCTCTCAGAGGCTTGGAGCCCTGCGTGCAAACTaGCTTGGAGACACATGCATAAACAGCTCAAGGGGA +
Preference number: 3 (lower is better)
Translates to: GCSQRLGALRAN*LGDTCINSSRG
Trigger: TCCCCTTGAGCTGTTTATGCATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp TTGAGAATTGGTGTGTGCTGGATAGGAGCTCCCTCATaGTGTAGGCGTCGTACATCTGCCGGCTCCGGCGTA +
Preference number: 3 (lower is better)
Translates to: LRIGVCWIGAPS*CRRRTSAGSGV
Trigger: TACGCCGGAGCCGGCAGATGTACGACGCCTACATCATGAGGGAGCTCCTATCCAGCACACACCAATTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp GCATTGGGGGCACTGTCTGGTGGGTTACCTAGGTCCTaGTTGAAGTCTGTGCCCACCAGAAATGGCTGTGAT +
Preference number: 3 (lower is better)
Translates to: ALGALSGGLPRS*LKSVPTRNGCD
Trigger: ATCACAGCCATTTCTGGTGGGCACAGACTTCAAGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR GCA 72 bp GGGACTTCATCTAGAGACCCAGTAACACTACCATACTaGCCCCGCCCCCAAGGCCTCAGGAATTGGACAAGT +
Preference number: 3 (lower is better)
Translates to: GTSSRDPVTLPY*PRPQGLRNWTS
Trigger: ACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTCTCTAGATGAAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR GCA 72 bp GCGGTGAGACAGGCCCTGAGTCTCACAGGTCCCTCATaGACCTGCCGAGTAATGGACCCTCTCAGTAAATTA +
Preference number: 3 (lower is better)
Translates to: AVRQALSLTGPS*TCRVMDPLSKL
Trigger: TAATTTACTGAGAGGGTCCATTACTCGGCAGGTGCATGAGGGACCTGTGAGACTCAGGGCCTGTCTCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR GCA 72 bp TTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATaGCAAGTGTGTGGCTTCCATCAGCCAACCAAGCCT +
Preference number: 3 (lower is better)
Translates to: LSSPHSLLGGSS*QVCGFHQPTKP
Trigger: AGGCTTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp TACACATGCTGCCAGTCAATGCCCTTGAAGAAGATGTaGTCCTTCAACTCTCGTGCCCCTCCTCCTCCGCAG +
Preference number: 3 (lower is better)
Translates to: YTCCQSMPLKKM*SFNSRAPPPPQ
Trigger: CTGCGGAGGAGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 72 bp TGCCTCTCTGTCACACTGACCACTGGTGAACAATCCTaGCTAGTGGGGCCTCAGAACAGCTGCTTCTCACAG +
Preference number: 3 (lower is better)
Translates to: CLSVTLTTGEQS*LVGPQNSCFSQ
Trigger: CTGTGAGAAGCAGCTGTTCTGAGGCCCCACTAGCCAGGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CAA 90 bp GTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGACCAAAGTGAGAGAGTaGCACAGCAGAATGCCTCTG +
Preference number: 3 (lower is better)
Translates to: VSLELPSFPPWWVIMPSVTKVRE*HSRMPL
Trigger: CAGAGGCATTCTGCTGTGCAACTCTCTCACTTTGGT...CACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CAA 90 bp TGCCAGTCAATGCCCTTGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTCCTTTGCAGGACTTCTCATaGTGTGACATGGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CQSMPLKKMCSFNSRAPPLQDFS*CDMGPG
Trigger: GCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA...AGGAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TCTATATGTGCTAAAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTTGGCCCCGCAGAAGCTaGAAGAGCATACAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: SICAKETRDTAPTPPCRSWPRRS*KSIQPR
Trigger: CCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCCA...AGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTTTAGCACATATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp CTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGTaGGCTGTCCATACTAACCATGCCTACACAGTAACC +
Preference number: 3 (lower is better)
Translates to: LLPLPAGLTEHV*AVHTNHAYTVT
Trigger: GGTTACTGTGTAGGCATGGTTAGTATGGACAGCTCACACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp GACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTaGCTGAGCATGTGTGAGCTGTCCATACTAACCATG +
Preference number: 3 (lower is better)
Translates to: DQRYSSYPSLQV*LSMCELSILTM
Trigger: CATGGTTAGTATGGACAGCTCACACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp CCTTCTCCCTCTGTCCTTACCCTACCACTGAAACGGTaGGTTCCTGTACCGAGTTGCTCTGCCTCTCTGTCA +
Preference number: 3 (lower is better)
Translates to: PSPSVLTLPLKR*VPVPSCSASLS
Trigger: TGACAGAGAGGCAGAGCAACTCGGTACAGGAACTCACCGTTTCAGTGGTAGGGTAAGGACAGAGGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 72 bp CAACCAAGCCTTCTCCCTCTGTCCTTACCCTACCACTaGAACGGTGAGTTCCTGTACCGAGTTGCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: QPSLLPLSLPYH*NGEFLYRVALP
Trigger: AGGCAGAGCAACTCGGTACAGGAACTCACCGTTTCAGTGGTAGGGTAAGGACAGAGGGAGAAGGCTTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp ACTGCCATAGCCCTTGGTGTTCTGGAGGCAGAGACTTaGCATGTAGGCCAGGCTAGCCTCAAACTCATAAGC +
Preference number: 3 (lower is better)
Translates to: TAIALGVLEAET*HVGQASLKLIS
Trigger: GCTTATGAGTTTGAGGCTAGCCTGGCCTACATGGCAAGTCTCTGCCTCCAGAACACCAAGGGCTATGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp CCACCGAGACCTTGCAGGACTTCTCATTGTGTGACATaGGGCCAGGCAGCAGCAGAGAAACCCACTTTTAAG +
Preference number: 3 (lower is better)
Translates to: PPRPCRTSHCVT*GQAAAEKPTFK
Trigger: CTTAAAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp CAAACTCATAAGCCTCCTGCCTCTGCCAATCAAGGCTaGGCTTGTGAACCTGCAGTGTCTTTCCCCTGTAGG +
Preference number: 3 (lower is better)
Translates to: QTHKPPASANQG*ACEPAVSFPCR
Trigger: CCTACAGGGGAAAGACACTGCAGGTTCACAAGCCCAGCCTTGATTGGCAGAGGCAGGAGGCTTATGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp TCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGTaGCTTCCATCAGCCAACCAAGCCTTCTCCCTCTGT +
Preference number: 3 (lower is better)
Translates to: SFPPWWVIMPSV*LPSANQAFSLC
Trigger: ACAGAGGGAGAAGGCTTGGTTGGCTGATGGAAGCCACACACTTGGCATGATGACCCACCAAGGAGGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp CGTGGTTTCCCACTTTGGGAACATGGCACCTTCGGGTaGCTTGTAGGAGTGTTCACACCTGTGTCAGGAAAC +
Preference number: 3 (lower is better)
Translates to: RGFPLWEHGTFG*LVGVFTPVSGN
Trigger: GTTTCCTGACACAGGTGTGAACACTCCTACAAGCCACCCGAAGGTGCCATGTTCCCAAAGTGGGAAACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp CACCACTTCTTGCTGCCAGCGCTCGGAGATCACCAGTaGGAAGTTCTTATAGAGGTCCTGGTCACAGTCCAA +
Preference number: 3 (lower is better)
Translates to: HHFLLPALGDHQ*EVLIEVLVTVQ
Trigger: TTGGACTGTGACCAGGACCTCTATAAGAACTTCCCACTGGTGATCTCCGAGCGCTGGCAGCAAGAAGTGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp CCCGCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCATTGCAGGACTTCTCATaGTGTGACATGGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PAVHTLWELNPESWRCKALQDFS*CDMGPG
Trigger: GCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAA...TGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CAA 90 bp TCTATATGTGCTAAAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTCCAAGGCCTCAGGAATaGGACAAGTCCACCGAGACC +
Preference number: 3 (lower is better)
Translates to: SICAKETRDTAPTPPCRSPRPQE*DKSTET
Trigger: GGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGG...AGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTTTAGCACATATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACAGCCTATCCTCTTCGTaGTCCAGCTTCTCATATTCT +
Preference number: 3 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHSLSSS*SSFSYS
Trigger: AGAATATGAGAAGCTGGACAACGAAGAGGATAGGCT...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp ACCACTGAAACGGTGAGTTCCTGTACCGAGTTGCTCTaGCTCTCTGTCACACTGACCACTGGTGAACAATCC +
Preference number: 3 (lower is better)
Translates to: TTETVSSCTELL*LSVTLTTGEQS
Trigger: GGATTGTTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTCGGTACAGGAACTCACCGTTTCAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp ATCATTCTCCTGTCTCAGTGTCCTGAATCCTGGGGCTaGCAGTCTGAGGTGCTGTGCTGCGTTCTCTCTTAT +
Preference number: 3 (lower is better)
Translates to: IILLSQCPESWG*QSEVLCCVLSY
Trigger: ATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCAGCCCCAGGATTCAGGACACTGAGACAGGAGAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp AAATCGCAGGCAAGGCCGAGATCCGATATCCTCACGTaGCCATATTCATCTAGGAGGATGTTCGCAGGCTTC +
Preference number: 3 (lower is better)
Translates to: KSQARPRSDILT*PYSSRRMFAGF
Trigger: GAAGCCTGCGAACATCCTCCTAGATGAATATGGGCACGTGAGGATATCGGATCTCGGCCTTGCCTGCGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 72 bp ATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTaGGGGCACTGTCTGGTGGGTTACCTAGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: IDGDSKFMHAMH*GHCLVGYLGPA
Trigger: AGCAGGACCTAGGTAACCCACCAGACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp TCTTGGGCACATCCTCAGATGCTCCCCAGGTCAAACTaGGGGATCAGGAGGACTCTGTCATACCTAACCATT +
Preference number: 3 (lower is better)
Translates to: SWAHPQMLPRSN*GIRRTLSYLTI
Trigger: AATGGTTAGGTATGACAGAGTCCTCCTGATCCCCCAGTTTGACCTGGGGAGCATCTGAGGATGTGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TTCAGAGTATCAGATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAACTGTCCTCTTCCTGCTaGGCCCTTGCCTTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: FRVSDDTLLCSLETQGDELSSSC*ALALGD
Trigger: ATCTCCCAAGGCAAGGGCCAAGCAGGAAGAGGACAG...TTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CAA 90 bp CAGGACTTCTCATTGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACCCACTTTGGGGTCACTCTCACATaGCAAGACAAATTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: QDFSLCDMGPGSSRETHFGVTLT*QDKLLP
Trigger: GGGAAGCAATTTGTCTTGCAATGTGAGAGTGACCCC...AAAGTGGGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp GGCCTCCTGGCACAGCACCAAGGTGACCACAGGCCATTGCCACCATTCATAATTGTCAGGATAAAGGAGTaGAGCTTGGCCTCATGGATT +
Preference number: 3 (lower is better)
Translates to: GLLAQHQGDHRPLPPFIIVRIKE*SLASWI
Trigger: AATCCATGAGGCCAAGCTCAACTCCTTTATCCTGAC...AATTATGAATGGTGGCAATGGCCTGTGGTCACCTTGGTGCTGTGCCAGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR-3UTR CAA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTACAACTCTTGTCTATCTaGGGCACATCCTCAGATGCT +
Preference number: 3 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLQLLSI*GTSSDA
Trigger: AGCATCTGAGGATGTGCCCAAGATAGACAAGAGTTG...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACTTCCTCTTGACCAAGTaGCTTATTTTTAGCCTTCCT +
Preference number: 3 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHFLLTK*LIFSLP
Trigger: AGGAAGGCTAAAAATAAGCAACTTGGTCAAGAGGAA...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp GAGATGGCGCTAGCAGATCCACCACCAGCCCATATATaGATCTTTAGGACTATGCCAGAGGCCATCTGCACT +
Preference number: 3 (lower is better)
Translates to: EMALADPPPAHI*IFRTMPEAICT
Trigger: AGTGCAGATGGCCTCTGGCATAGTCCTAAAGATTCATATATGGGCTGGTGGTGGATCTGCTAGCGCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp AGCTCAAGGGGAGCTGACCAATTTCAGAGTATCAGATaGCACACTACTCTGCAGCCTGGAAACCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: SSRGADQFQSIR*HTTLQPGNPGR
Trigger: TCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAAATTGGTCAGCTCCCCTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp ACTTCCGTAAGTACACATGCTGCCAGTCAATGCCCTTaGAGAAGATGTGCTCCTTCAACTCTCGTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: TSVSTHAASQCP*RRCAPSTLVPL
Trigger: GAGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp ACTTCATGGCATACATTTTACCGGTGTCTGCTTTCCTaGAGCCATAAACTTCCCCAAACCCTCCTCGGCCGA +
Preference number: 3 (lower is better)
Translates to: TSWHTFYRCLLS*SHKLPQTLLGR
Trigger: TCGGCCGAGGAGGGTTTGGGGAAGTTTATGGCTGCAGGAAAGCAGACACCGGTAAAATGTATGCCATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 72 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTaGAGATGTAAGGCAAGACCTTGGCCCAGAGCTACT +
Preference number: 3 (lower is better)
Translates to: AVHTLWELNPES*RCKARPWPRAT
Trigger: AGTAGCTCTGGGCCAAGGTCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp CCTGGCTTCACTGAGCCTCTTTCCAGAGCTTTCTGCTaGCCCCAGGATCACATATATGAATGTCAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: PGFTEPLSRAFC*PQDHIYECQSV
Trigger: GACTGACTGACATTCATATATGTGATCCTGGGGCCAGCAGAAAGCTCTGGAAAGAGGCTCAGTGAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp GGACCATTTTACGTTCTGGGTCCCTGGATACCAAAGTaGGAGAGTTGCACAGCAGAATGCCTCTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: GPFYVLGPWIPK*ESCTAECLCFF
Trigger: GAAGAAGCAGAGGCATTCTGCTGTGCAACTCTCTCACTTTGGTATCCAGGGACCCAGAACGTAAAATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp TGGAATCAAACATGTAGGAAGGCGGTGATGCCATTCTaGGGTTCACCACATCTAAGTTGGACACGCACCCCT +
Preference number: 3 (lower is better)
Translates to: WNQTCRKAVMPF*GSPHLSWTRTP
Trigger: AGGGGTGCGTGTCCAACTTAGATGTGGTGAACCTCAGAATGGCATCACCGCCTTCCTACATGTTTGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 72 bp CCTTCCTCCTGGCCTCGATTTTATCAGTATCAGCATTaGCGGCGTCATAGATGGTCTCCACCACTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: PSSWPRFYQYQH*RRHRWSPPLLA
Trigger: AGCAAGAAGTGGTGGAGACCATCTATGACGCCGTCAATGCTGATACTGATAAAATCGAGGCCAGGAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR GCA 72 bp CCTGAATCCTGGGGCTGCCAGTCTGAGGTGCTGTGCTaGGTTCTCTCTTATTTGTCTAAGTTGACAAAAGCA +
Preference number: 3 (lower is better)
Translates to: PESWGCQSEVLC*VLSYLSKLTKA
Trigger: TGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCAGCCCCAGGATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp GATGAATTCATTAAGTGTGCAAACAATGCCCGTGAGTaGACAGTCTGTCCTCTTCCTGCTTGGCCCTTGCCT +
Preference number: 3 (lower is better)
Translates to: DEFIKCANNARE*TVCPLPAWPLP
Trigger: AGGCAAGGGCCAAGCAGGAAGAGGACAGACTGTGCACTCACGGGCATTGTTTGCACACTTAATGAATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR GCA 72 bp GAACCCAGTCACACAAGACTAACATGGACTCTGAGGTaGAAGCCAGATTTGAGAAATCTAGGCAGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: EPSHTRLTWTLR*KPDLRNLGSGA
Trigger: AGCCCCACTGCCTAGATTTCTCAAATCTGGCTTGCACCTCAGAGTCCATGTTAGTCTTGTGTGACTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp TTAAACCCAGAATCTTGGAGATGTAAGGCAAGACCTTaGCCCAGAGCTACTGCCATAGCCCTTGGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LNPESWRCKARP*PRATAIALGVL
Trigger: CAGAACACCAAGGGCTATGGCAGTAGCTCTGGGCCAAGGTCTTGCCTTACATCTCCAAGATTCTGGGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp TGCACAGTCTGTCCTCTTCCTGCTTGGCCCTTGCCTTaGGAGATGTGTCTCAAGATCCTAAGATGTGAATCA +
Preference number: 3 (lower is better)
Translates to: CTVCPLPAWPLP*EMCLKILRCES
Trigger: TGATTCACATCTTAGGATCTTGAGACACATCTCCCAAGGCAAGGGCCAAGCAGGAAGAGGACAGACTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CAA 90 bp TCTATATGTGCTAAAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTCAACTCTTGTCTATCTaGGGCACATCCTCAGATGCT +
Preference number: 3 (lower is better)
Translates to: SICAKETRDTAPTPPCRSQLLSI*GTSSDA
Trigger: AGCATCTGAGGATGTGCCCAAGATAGACAAGAGTTG...AGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTTTAGCACATATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TTTGTGTGTATGTGTGTGTTACCTACAAAGCAAGTCACACCTCTAGCATCCCATCTTCCTGCTTGGCCCTaGCCTTGGGAGATGTGTCTC +
Preference number: 3 (lower is better)
Translates to: FVCMCVLPTKQVTPLASHLPAWP*PWEMCL
Trigger: GAGACACATCTCCCAAGGCAAGGGCCAAGCAGGAAG...ATGGGATGCTAGAGGTGTGACTTGCTTTGTAGGTAACACACACATACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CAA 90 bp CCTGGAAAGAAGTCATCAGAGGAAGGAAGTGCACACGATACTCAGGGTTACCTCGTTCTACAGCTTGCTTaGAGAATTGGTGTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: PGKKSSEEGSAHDTQGYLVLQLA*RIGVCW
Trigger: CCAGCACACACCAATTCTCAAAGCAAGCTGTAGAAC...GAGGTAACCCTGAGTATCGTGTGCACTTCCTTCCTCTGATGACTTCTTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TGTGATGGATGCCGCGAAGTTTCCTCGAGGGGCATCCCTGGAAAGAAGTCATCAATCTTCACCCTTTTCTaGTCTAAGCACTTCATGGCA +
Preference number: 3 (lower is better)
Translates to: CDGCREVSSRGIPGKKSSIFTLF*SKHFMA
Trigger: TGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGAT...TGATGACTTCTTTCCAGGGATGCCCCTCGAGGAAACTTCGCGGCATCCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp TTCCAGAGCTTTCTGCTGGCCCCAGGATCACATATATaGATGTCAGTCAGTCCCCAAGATGCTGACTGCATT +
Preference number: 3 (lower is better)
Translates to: FQSFLLAPGSHI*MSVSPQDADCI
Trigger: AATGCAGTCAGCATCTTGGGGACTGACTGACATTCATATATGTGATCCTGGGGCCAGCAGAAAGCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp TTTAATTTCAAAGGGCCTCCTGGCACAGCACCAAGGTaGCCACAGGCCATTGCCACCATTCATAATTACCCT +
Preference number: 3 (lower is better)
Translates to: FNFKGPPGTAPR*PQAIATIHNYP
Trigger: AGGGTAATTATGAATGGTGGCAATGGCCTGTGGTCACCTTGGTGCTGTGCCAGGAGGCCCTTTGAAATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR GCA 72 bp ATCCACCACCAGCCCATATATGAATCTTTAGGACTATaGCAGAGGCCATCTGCACTCTCTCTCATTCCTGTC +
Preference number: 3 (lower is better)
Translates to: IHHQPIYESLGL*QRPSALSLIPV
Trigger: GACAGGAATGAGAGAGAGTGCAGATGGCCTCTGGCATAGTCCTAAAGATTCATATATGGGCTGGTGGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR GCA 72 bp TGTCCTGAATCCTGGGGCTGCCAGTCTGAGGTGCTGTaGTGCGTTCTCTCTTATTTGTCTAAGTTGACAAAA +
Preference number: 3 (lower is better)
Translates to: CPESWGCQSEVL*CVLSYLSKLTK
Trigger: TTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCAGCCCCAGGATTCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp TTCTTGGAGAGATGGCTCTGGACATGTTCTACAGCTTaGTTTGAGAATTGGTGTGTGCTGGATAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: FLERWLWTCSTA*FENWCVLDRSS
Trigger: GGAGCTCCTATCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR-3UTR CAA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACACCCCTCATTCCCTCCTaGGTGGGTCATCATGCCAAG +
Preference number: 3 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTPLIPS*VGHHAK
Trigger: CTTGGCATGATGACCCACCAAGGAGGGAATGAGGGG...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR-3UTR CAA 90 bp CTAACCATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTACATTGCAAGACAAATaGCTTCCCTCCCTTTATCCT +
Preference number: 3 (lower is better)
Translates to: LTIDGDSKFMHAMHWGHCTLQDK*LPSLYP
Trigger: AGGATAAAGGGAGGGAAGCAATTTGTCTTGCAATGT...ACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAATGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp GTAATGTCAGCCAATGGGCCTTTCAATGTGCACACTTaGGTATCAGTAGCAAGACAGGTTCCTCTGTCAACC +
Preference number: 3 (lower is better)
Translates to: VMSANGPFNVHT*VSVARQVPLST
Trigger: GGTTGACAGAGGAACCTGTCTTGCTACTGATACTCAAGTGTGCACATTGAAAGGCCCATTGGCTGACATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp AGTGTAGCCGTCACCTGTTTCTTGGAGAGATGGCTCTaGACATGTTCTACAGCTTGCTTTGAGAATTGGTGT +
Preference number: 3 (lower is better)
Translates to: SVAVTCFLERWL*TCSTACFENWC
Trigger: ACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp ACTGCATTCCAGGATAAACTATCTCTCCATTCTAGTTaGACCACAACCCACGCAGTCAAGTGGAACACACAC +
Preference number: 3 (lower is better)
Translates to: TAFQDKLSLHSS*TTTHAVKWNTH
Trigger: GTGTGTGTTCCACTTGACTGCGTGGGTTGTGGTTCAACTAGAATGGAGAGATAGTTTATCCTGGAATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CCA 72 bp ACCTCATTTTCCCCAGCACAAGAACATAATACACACTaGGGACTGTCAGGAAGATCCAGGACAGAACACAAA +
Preference number: 3 (lower is better)
Translates to: TSFSPAQEHNTH*GLSGRSRTEHK
Trigger: TTTGTGTTCTGTCCTGGATCTTCCTGACAGTCCCCAGTGTGTATTATGTTCTTGTGCTGGGGAAAATGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp TGGAAAAGTGTAGCCGTCACCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACAGCTTGCTTTGAGAAT +
Preference number: 3 (lower is better)
Translates to: WKSVAVTCFLER*LWTCSTACFEN
Trigger: ATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CCA 72 bp ATCCCCACGAAGGCTTTCACAGATTTCTTCTATGTATaGCTGGAAAAGTGTAGCCGTCACCTGTTTCTTGGA +
Preference number: 3 (lower is better)
Translates to: IPTKAFTDFFYV*LEKCSRHLFLG
Trigger: TCCAAGAAACAGGTGACGGCTACACTTTTCCAGCCATACATAGAAGAAATCTGTGAAAGCCTTCGTGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR TCA 72 bp AACAGCAATAAGTGGAACATCCTCCATCATGATAAGTaGTCCAGGCCAGAAACCCAGGTCACTAGTACTCAT +
Preference number: 3 (lower is better)
Translates to: NSNKWNILHHDK*SRPETQVTSTH
Trigger: ATGAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGTTCCACTTATTGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR TCA 72 bp ACATTTCGAACCAAGTCTCTGTGGCTGCTTTTCAATTaGAGGCCATTTAAAGTGCGTGGTTTCCCACTTTGG +
Preference number: 3 (lower is better)
Translates to: TFRTKSLWLLFN*RPFKVRGFPLW
Trigger: CCAAAGTGGGAAACCACGCACTTTAAATGGCCTTCAATTGAAAAGCAGCCACAGAGACTTGGTTCGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp CATAAAAGCTTGAGAAGTAAGGACCATTTTACGTTCTaGGTCCCTGGATACCAAAGTGAGAGAGTTGCACAG +
Preference number: 3 (lower is better)
Translates to: HKSLRSKDHFTF*VPGYQSERVAQ
Trigger: CTGTGCAACTCTCTCACTTTGGTATCCAGGGACCCAGAACGTAAAATGGTCCTTACTTCTCAAGCTTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CCA 72 bp GCTGGTTTTACATGGACAGTTTGTAATGTCAGCCAATaGGCCTTTCAATGTGCACACTTGAGTATCAGTAGC +
Preference number: 3 (lower is better)
Translates to: AGFTWTVCNVSQ*AFQCAHLSISS
Trigger: GCTACTGATACTCAAGTGTGCACATTGAAAGGCCCATTGGCTGACATTACAAACTGTCCATGTAAAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp GTAGGTCACCATCCATCCTTCATTGCTGGTTTTACATaGACAGTTTGTAATGTCAGCCAATGGGCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: VGHHPSFIAGFT*TVCNVSQWAFQ
Trigger: TTGAAAGGCCCATTGGCTGACATTACAAACTGTCCATGTAAAACCAGCAATGAAGGATGGATGGTGACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR GCA 72 bp ATGAAAGGCGAACATTTCGAACCAAGTCTCTGTGGCTaGTTTTCAATTGAAGGCCATTTAAAGTGCGTGGTT +
Preference number: 3 (lower is better)
Translates to: MKGEHFEPSLCG*FSIEGHLKCVV
Trigger: AACCACGCACTTTAAATGGCCTTCAATTGAAAAGCAGCCACAGAGACTTGGTTCGAAATGTTCGCCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp ATGGAACAAGTAGAACCCAGTCACACAAGACTAACATaGACTCTGAGGTGCAAGCCAGATTTGAGAAATCTA +
Preference number: 3 (lower is better)
Translates to: MEQVEPSHTRLT*TLRCKPDLRNL
Trigger: TAGATTTCTCAAATCTGGCTTGCACCTCAGAGTCCATGTTAGTCTTGTGTGACTGGGTTCTACTTGTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp AGGTGCTGTGCTGCGTTCTCTCTTATTTGTCTAAGTTaGCAAAAGCAACCAACAGAGAAAATGCTAATGTCC +
Preference number: 3 (lower is better)
Translates to: RCCAAFSLICLS*QKQPTEKMLMS
Trigger: GGACATTAGCATTTTCTCTGTTGGTTGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CCA 72 bp TATAACTTGAACTGTTTTCATACCCTAGGGTGTGTGTaGGTGTGTGTTTGTGTGTATGTGTGTGTTACCTAC +
Preference number: 3 (lower is better)
Translates to: YNLNCFHTLGCV*VCVCVYVCVTY
Trigger: GTAGGTAACACACACATACACACAAACACACACCCACACACACCCTAGGGTATGAAAACAGTTCAAGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR TCA 72 bp ATCACATATATGAATGTCAGTCAGTCCCCAAGATGCTaGCTGCATTCCAGGATAAACTATCTCTCCATTCTA +
Preference number: 3 (lower is better)
Translates to: ITYMNVSQSPRC*LHSRINYLSIL
Trigger: TAGAATGGAGAGATAGTTTATCCTGGAATGCAGTCAGCATCTTGGGGACTGACTGACATTCATATATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR-3UTR CAA 90 bp AAGAAGCAGAAATACAGATGGTTTCCATGGGAACGCACATACGGATTCAATAAAGCCAGACATAAAAGCTaGAGAAGTAAGGACCATTTT +
Preference number: 3 (lower is better)
Translates to: KKQKYRWFPWERTYGFNKARHKS*RSKDHF
Trigger: AAAATGGTCCTTACTTCTCAAGCTTTTATGTCTGGC...TTTATTGAATCCGTATGTGCGTTCCCATGGAAACCATCTGTATTTCTGCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR TCA 72 bp GATATTCTTGGACTTTGTGCATTGATTCTTGCCTTATaGAACCACGCCTATGTAGAGTATAGCTGTGTAAAA +
Preference number: 3 (lower is better)
Translates to: DILGLCALILAL*NHAYVEYSCVK
Trigger: TTTTACACAGCTATACTCTACATAGGCGTGGTTTCATAAGGCAAGAATCAATGCACAAAGTCCAAGAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CAA 72 bp CCAGAAGGCCGCCCTGGTGTCCTGAGCCTCCTCGGCTaGGAGCAGCCCCGTCAGTGCTCAGAAACACTGTGT +
Preference number: 4 (lower is better)
Translates to: PEGRPGVLSLLG*EQPRQCSETLC
Trigger: ACACAGTGTTTCTGAGCACTGACGGGGCTGCTCCAAGCCGAGGAGGCTCAGGACACCAGGGCGGCCTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
CDS-3UTR GCA 90 bp AAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTGACTGAGCATGTGGCAGGACGACCTTCTTaGTGGCGCGCGCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KRPEIQLLPLPAGLTEHVAGRPS*WRARPA
Trigger: CGCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGC...CACATGCTCAGTCAGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
CDS-3UTR CCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTACCGCAGCCCAGCCGCTaGCTCACGTCCCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLPQPSR*LTSRWS
Trigger: GCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGG...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR GCA 90 bp GGGTCCCTGGATACCAAAGTGAGAGAGTTGCACAGCAGAATGCCTCTGCTTCTTGCAGGACGACCTTCTTaGTGGCGCGCGCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GSLDTKVRELHSRMPLLLAGRPS*WRARPA
Trigger: CGCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGC...AAGAAGCAGAGGCATTCTGCTGTGCAACTCTCTCACTTTGGTATCCAGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
3UTR CAA 72 bp TCATCGAAGGAGCCGATATCGAAGGCATCTGCAGCGTaGACCTCTCCCCGAGGAGGGATTAGGGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSKEPISKASAA*TSPRGGIRGGG
Trigger: CCCGCCACCCCTAATCCCTCCTCGGGGAGAGGTCAACGCTGCAGATGCCTTCGATATCGGCTCCTTCGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 72 bp AACTCCAGGATGGCGGCCCGTGGTTTGTTGAGGAATTaGGGGGCACGGCGCAGCAGTCTCTGGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: NSRMAARGLLRN*GARRSSLWASL
Trigger: CAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCGCCATCCTGGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
CDS-3UTR GCA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACGCAGGACGACCTTCTTaGTGGCGCGCGCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHAGRPS*WRARPA
Trigger: CGCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGC...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CAA 72 bp AATTTGGGGGCACGGCGCAGCAGTCTCTGGGCCTCATaGAAGGTGCAGGTCAGCTCCTTCAGCCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: NLGARRSSLWAS*KVQVSSFSHCA
Trigger: TGCACAGTGGCTGAAGGAGCTGACCTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCGTGCCCCCAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
CDS-3UTR GCA 90 bp GGCCTCCTGGCACAGCACCAAGGTGACCACAGGCCATTGCCACCATTCATAATTCTCCTTCAACTCTCGTaGCCCTCCTCCTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLLAQHQGDHRPLPPFIILLQLS*PSSSAA
Trigger: GGCTGCGGAGGAGGAGGGGCACGAGAGTTGAAGGAG...AATTATGAATGGTGGCAATGGCCTGTGGTCACCTTGGTGCTGTGCCAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACAGAACCAGTCGGCGCTaGTGTCATAGCACGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHRTSRR*CHSTFP
Trigger: AGGGAACGTGCTATGACAGCAGCGCCGACTGGTTCT...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCATCTTCTATGTATGGCTaGAAAAGTGTAGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPSSMYG*KSVAVT
Trigger: GGTGACGGCTACACTTTTCCAGCCATACATAGAAGA...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp TACCCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAACCGCAGCCCAGCCGCTaGCTCACGTCCCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YPRRHQQLSKPMALSQDKPQPSR*LTSRWS
Trigger: GCTCCAGCGGGACGTGAGCCAGCGGCTGGGCTGCGG...TTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR CAA 72 bp ACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATaGGACAAGTCCACCGAGACCTTGCAGGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: TTILPPPPRPQE*DKSTETLQDFS
Trigger: TGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
CDS-3UTR TCA 90 bp CAGTGGGGCTGGCCCTGGATGAGGCCGAGTCTCAGCACTGAGCCAGCATTCCTCTTCTACAGCTTGCTTTaGGAATTGGTGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QWGWPWMRPSLSTEPAFLFYSLL*ELVCAG
Trigger: TCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAA...GAGGAATGCTGGCTCAGTGCTGAGACTCGGCCTCATCCAGGGCCAGCCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTATGCCTGAAGGGGCTGTaGCCCCGCAGAAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLCLKGL*PRRSLK
Trigger: CTTCAAGCTTCTGCGGGGCCACAGCCCCTTCAGGCA...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp TCGGCCTCAGGAACGAAGCAAGTCTTGCAAAAATCCTaGGGGGATTCTGAGGGCGTGTCCCTTGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SASGTKQVLQKS*GDSEGVSLELP
Trigger: GGGGAGCTCAAGGGACACGCCCTCAGAATCCCCCAAGGATTTTTGCAAGACTTGCTTCGTTCCTGAGGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp CAAGTGGAACACACACAGGGGGCTGCTCTCAGAGGCTaGGAGCCCTGCGTGCAAACTGACTTGGAGACACAT +
Preference number: 4 (lower is better)
Translates to: QVEHTQGAALRG*EPCVQTDLETH
Trigger: ATGTGTCTCCAAGTCAGTTTGCACGCAGGGCTCCAAGCCTCTGAGAGCAGCCCCCTGTGTGTGTTCCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR TCA 90 bp CTAACCATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTGGCCCCGCAGAAGCTTaGAGAGCATACAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTIDGDSKFMHAMHWGHCGPAEA*RAYSPG
Trigger: CCCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCC...ACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAATGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp CTAACCATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCGGCCCGTGGTTTGTTaGGGAATTTGGGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LTIDGDSKFMHAMHWGHCRPVVC*GIWGHG
Trigger: GCCGTGCCCCCAAATTCCTCAACAAACCACGGGCCG...ACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAATGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR GCA 90 bp CCTGGAAAGAAGTCATCAGAGGAAGGAAGTGCACACGATACTCAGGGTTACCTCCTCCTTCAACTCTCGTaGCCCTCCTCCTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGKKSSEEGSAHDTQGYLLLQLS*PSSSAA
Trigger: GGCTGCGGAGGAGGAGGGGCACGAGAGTTGAAGGAG...GAGGTAACCCTGAGTATCGTGTGCACTTCCTTCCTCTGATGACTTCTTTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp TGCACAGTCTGTCCTCTTCCTGCTTGGCCCTTGCCTTGGGAGATGTGTCTCAAGAGTGTGACAAAGGGCTaGGTTGGGGTCCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: CTVCPLPAWPLPWEMCLKSVTKG*VGVPRK
Trigger: CTTTCTGGGGACCCCAACCCAGCCCTTTGTCACACT...CTTGAGACACATCTCCCAAGGCAAGGGCCAAGCAGGAAGAGGACAGACTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
3UTR CAA 72 bp TTGGACAAGTCCACCGAGACCTTGCAGGACTTCTCATaGTGTGACATGGGGCCAGGCAGCAGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: LDKSTETLQDFS*CDMGPGSSRET
Trigger: GGTTTCTCTGCTGCTGCCTGGCCCCATGTCACACAATGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
CDS-3UTR TCA 90 bp ATGGCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCGGCCCCGCAGAAGCTTaGAGAGCATACAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MALSQDKGVELGLMDSILGPAEA*RAYSPG
Trigger: CCCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCC...GAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR TCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTAGTCTTTGCCACTGTGTaGGAAAGGGGTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLVFATV*ERGSPA
Trigger: AGCTGGGGAACCCCTTTCTCACACAGTGGCAAAGAC...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp GACCCAGTAACACTACCATACTGCCCCCGCCCCCAAGGCCTCAGGAATTGGACAGCTTGCTTTGAGAATTaGTGTGTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: DPVTLPYCPRPQGLRNWTACFEN*CVLDRS
Trigger: GCTCCTATCCAGCACACACCAATTCTCAAAGCAAGC...TGTCCAATTCCTGAGGCCTTGGGGGCGGGGGCAGTATGGTAGTGTTACTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp GAACCTGCAGTGTCTTTCCCCTGTAGGTCACCATCCATCCTTCATTGCTGGTTTCGGCGCAGCAGTCTCTaGGCCTCATTGAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EPAVSFPCRSPSILHCWFRRSSL*ASLKVQ
Trigger: CTGCACCTTCAATGAGGCCCAGAGACTGCTGCGCCG...AAACCAGCAATGAAGGATGGATGGTGACCTACAGGGGAAAGACACTGCAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp ATGGCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTGCCTGAAGGGGCTGTaGCCCCGCAGAAGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MALSQDKGVELGLMDSILCLKGL*PRRSLK
Trigger: CTTCAAGCTTCTGCGGGGCCACAGCCCCTTCAGGCA...GAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp ACAGCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTGCGGTGAGACAGGCATTTCTGTGACACAGTaGTGGCTTGGAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: TAALCVIMNPEFMCGETGISVTQ*WLGELQ
Trigger: CTGGAGTTCTCCAAGCCACCACTGTGTCACAGAAAT...GCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp TACCCTACCACTGAAACGGTGAGTTCCTGTACCGAGTaGCTCTGCCTCTCTGTCACACTGACCACTGGTGAA +
Preference number: 4 (lower is better)
Translates to: YPTTETVSSCTE*LCLSVTLTTGE
Trigger: TTCACCAGTGGTCAGTGTGACAGAGAGGCAGAGCAACTCGGTACAGGAACTCACCGTTTCAGTGGTAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp TCTATATGTGCTAAAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTTCATCAGGTCCAGGATaGAGCAGAGTTTGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SICAKETRDTAPTPPCRSSSGPG*SRVCPA
Trigger: CGCCGGACAAACTCTGCTTCATCCTGGACCTGATGA...AGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTTTAGCACATATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp AGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTGTCTTTGCCACTGTGTaGGAAAGGGGTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQDKGVELGLMDSILSGTVFATV*ERGSPA
Trigger: AGCTGGGGAACCCCTTTCTCACACAGTGGCAAAGAC...AGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTACGGTGTCTGCTTTCCTaGAGCCATAAACTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLRCLLS*SHKLPQ
Trigger: TTGGGGAAGTTTATGGCTGCAGGAAAGCAGACACCG...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR GCA 90 bp AGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTAAGCAGGTGTGCATGTaGTCGAGGCCCAGGATGATC +
Preference number: 4 (lower is better)
Translates to: SQDKGVELGLMDSILSGTKQVCM*SRPRMI
Trigger: GATCATCCTGGGCCTCGAGCACATGCACACCTGCTT...AGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp GGCCTCCTGGCACAGCACCAAGGTGACCACAGGCCATTGCCACCATTCATAATTTTCCGTAAGTACACATaGTGCCAGTCAATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GLLAQHQGDHRPLPPFIIFRKYT*CQSMPL
Trigger: CAAGGGCATTGACTGGCAGCATGTGTACTTACGGAA...AATTATGAATGGTGGCAATGGCCTGTGGTCACCTTGGTGCTGTGCCAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp GTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTGTTCAGCATGTACCCGTaGATGATGCAGTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VRIKELSLASWIPYSPALFSMYP*MMQSFP
Trigger: GGGGAAGGACTGCATCATGCACGGGTACATGCTGAA...CAGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp ATCATAAACCCATCTGGCTCCTCCTCCCACCCTATGGATCCAGGACACACCCTACCGTCACCTGTTTCTTaGAGAGATGGCTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: IINPSGSSSHPMDPGHTLPSPVS*RDGSGH
Trigger: ATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGG...TAGGGTGTGTCCTGGATCCATAGGGTGGGAGGAGGAGCCAGATGGGTTTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp CTAACCATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCATGGGTGCCCACGCTaGCATGAGGCTTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LTIDGDSKFMHAMHWGHCHGCPR*HEASFW
Trigger: CCAAAAAGAAGCCTCATGCCAGCGTGGGCACCCATG...ACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAATGGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp TCTGCAGCCTGGAAACCCAGGGAGATGAATTCATTAAGTGTGCAAACAATGCCCATCAAGGAGGAAGTGTaGCAAAGGGCTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAAWKPREMNSLSVQTMPIKEEV*QRAGLG
Trigger: CCCCAACCCAGCCCTTTGTCACACTTCCTCCTTGAT...GGGCATTGTTTGCACACTTAATGAATTCATCTCCCTGGGTTTCCAGGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR GCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCAAGCAGGTGTGCATGTaGTCGAGGCCCAGGATGATC +
Preference number: 4 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLKQVCM*SRPRMI
Trigger: GATCATCCTGGGCCTCGAGCACATGCACACCTGCTT...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR GCA 90 bp ATGGCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCAGAACCAGTCGGCGCTaGTGTCATAGCACGTTCCCT +
Preference number: 4 (lower is better)
Translates to: MALSQDKGVELGLMDSILRTSRR*CHSTFP
Trigger: AGGGAACGTGCTATGACAGCAGCGCCGACTGGTTCT...GAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp ACAGCGGCCCTGTGCGTGATCATGAACCCAGAATTCATGTGCGGTGAGACAGGCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACA +
Preference number: 4 (lower is better)
Translates to: TAALCVIMNPEFMCGETGCFLER*LWTCST
Trigger: TGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACA...GCCTGTCTCACCGCACATGAATTCTGGGTTCATGATCACGCACAGGGCCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp AGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAAGGAGTTTCATCAGGTCCAGGATaGAGCAGAGTTTGTCCGGCG +
Preference number: 4 (lower is better)
Translates to: RRHQQLSKPMALSQDKGVSSGPG*SRVCPA
Trigger: CGCCGGACAAACTCTGCTTCATCCTGGACCTGATGA...AACTCCTTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp ATGGCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCCGGCCGATGATCCTGTaGACACTGAAGTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: MALSQDKGVELGLMDSILRPMIL*TLKSFM
Trigger: CATGAACGACTTCAGTGTGCACAGGATCATCGGCCG...GAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp GCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCCGGTGTCTGCTTTCCTaGAGCCATAAACTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ALSQDKGVELGLMDSILSRCLLS*SHKLPQ
Trigger: TTGGGGAAGTTTATGGCTGCAGGAAAGCAGACACCG...GGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAAGATTCAGCATGTACCCGTaGATGATGCAGTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AVHTLWELNPESWRCKARFSMYP*MMQSFP
Trigger: GGGGAAGGACTGCATCATGCACGGGTACATGCTGAA...TCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp ATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCTGGTGTTGGAGAGATGGCTCTaGACATGTTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IDGDSKFMHAMHWGHCLVLERWL*TCSTAC
Trigger: GCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAA...CACCAGACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp AATTACCCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATCATGGGTGCCCACGCTaGCATGAGGCTTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NYPRRHQQLSKPMALSQDHGCPR*HEASFW
Trigger: CCAAAAAGAAGCCTCATGCCAGCGTGGGCACCCATG...ATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGGGTAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp GAACCTGCAGTGTCTTTCCCCTGTAGGTCACCATCCATCCTTCATTGCTGGTTTTCTGTGACACAGTGGTaGCTTGGAGAACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EPAVSFPCRSPSILHCWFSVTQW*LGELQD
Trigger: ATCCTGGAGTTCTCCAAGCCACCACTGTGTCACAGA...AAACCAGCAATGAAGGATGGATGGTGACCTACAGGGGAAAGACACTGCAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp TGGAGAGATGGCTCTGGACATGTTCTACAGCTTGCTTaGAGAATTGGTGTGTGCTGGATAGGAGCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WRDGSGHVLQLA*RIGVCWIGAPS
Trigger: TGAGGGAGCTCCTATCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 72 bp TACTTCCGTAAGTACACATGCTGCCAGTCAATGCCCTaGAAGAAGATGTGCTCCTTCAACTCTCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: YFRKYTCCQSMP*KKMCSFNSRAP
Trigger: AGGGGCACGAGAGTTGAAGGAGCACATCTTCTTCAAGGGCATTGACTGGCAGCATGTGTACTTACGGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
3UTR CAA 72 bp CTTCAGCCACTGTGCAAACTCGGGGTCACTCTCACATaGCAAGACAAATTGCTTCCCTCCCTTTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LQPLCKLGVTLT*QDKLLPSLYPE
Trigger: CTCAGGATAAAGGGAGGGAAGCAATTTGTCTTGCAATGTGAGAGTGACCCCGAGTTTGCACAGTGGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
CDS-3UTR TCA 90 bp GTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTGTCGTTCATGCTCAGGTaGATATTCAACTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: VRIKELSLASWIPYSPALSFMLR*IFNSTF
Trigger: GAACGTGGAGTTGAATATTCACCTGAGCATGAACGA...CAGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR TCA 90 bp TCTATATGTGCTAAAGAGACCAGAGATACAGCTCCTACCCCTCCCTGCAGGTCTTCTCCTCCACAGACATaGTCTGTTCCATGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SICAKETRDTAPTPPCRSSPPQT*SVPWSV
Trigger: TACTGACCATGGAACAGATCATGTCTGTGGAGGAGA...AGACCTGCAGGGAGGGGTAGGAGCTGTATCTCTGGTCTCTTTAGCACATATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp CCCGCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCATCCCTCCCTTTATCCTaGGTAAGATGCACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PAVHTLWELNPESWRCKASLPLS*VRCTFC
Trigger: ACAGAAAGTGCATCTTACTCAGGATAAAGGGAGGGA...TGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp TTCAGAGTATCAGATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAACCGTCACCTGTTTCTTaGAGAGATGGCTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: FRVSDDTLLCSLETQGDEPSPVS*RDGSGH
Trigger: ATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGG...TTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp GCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCCATGAGGCTTCTTTTTaGAGAAATCGCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALSQDKGVELGLMDSILSHEASF*RNRRQG
Trigger: GCCTTGCCTGCGATTTCTCCAAAAAGAAGCCTCATG...GGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR CAA 72 bp ATGTATGGCTGGAAAAGTGTAGCCGTCACCTGTTTCTaGGAGAGATGGCTCTGGACATGTTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: MYGWKSVAVTCF*ERWLWTCSTAC
Trigger: GCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCAGCCATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
CDS-3UTR CCA 90 bp AATTACCCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATCCGTCACCTGTTTCTTaGAGAGATGGCTCTGGACAT +
Preference number: 4 (lower is better)
Translates to: NYPRRHQQLSKPMALSQDPSPVS*RDGSGH
Trigger: ATGTCCAGAGCCATCTCTCCAAGAAACAGGTGACGG...ATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp GCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCTCTTCTATGTATGGCTaGAAAAGTGTAGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: ALSQDKGVELGLMDSILSSSMYG*KSVAVT
Trigger: GGTGACGGCTACACTTTTCCAGCCATACATAGAAGA...GGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp TGTGATGGATGCCGCGAAGTTTCCTCGAGGGGCATCCCTGGAAAGAAGTCATCATGTCTAAGCACTTCATaGCATACATTTTACCGGTGT +
Preference number: 4 (lower is better)
Translates to: CDGCREVSSRGIPGKKSSCLSTS*HTFYRC
Trigger: ACACCGGTAAAATGTATGCCATGAAGTGCTTAGACA...TGATGACTTCTTTCCAGGGATGCCCCTCGAGGAAACTTCGCGGCATCCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCTTCTACAGCTTGCTTTaGGAATTGGTGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLFYSLL*ELVCAG
Trigger: TCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAA...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR TCA 90 bp AGGGATGGCATAGGTTTCTGTTTCCTGGAAGGACTCAGACTATTAGAAGCCGAGTCGTTCATGCTCAGGTaGATATTCAACTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RDGIGFCFLEGLRLLEAESFMLR*IFNSTF
Trigger: GAACGTGGAGTTGAATATTCACCTGAGCATGAACGA...CTCGGCTTCTAATAGTCTGAGTCCTTCCAGGAAACAGAAACCTATGCCATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR GCA 90 bp TTCAGAGTATCAGATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAAGCGCACACACCAAGCTaGATACCTTTCCATAAACTT +
Preference number: 4 (lower is better)
Translates to: FRVSDDTLLCSLETQGDEAHTPS*IPFHKL
Trigger: AAGTTTATGGAAAGGTATGCAGCTTGGTGTGTGCGC...TTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp AATTACCCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATGCTTGCTTTGAGAATTaGTGTGTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: NYPRRHQQLSKPMALSQDACFEN*CVLDRS
Trigger: GCTCCTATCCAGCACACACCAATTCTCAAAGCAAGC...ATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp ATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAATTCATTAAGTGTGTTGGAGAGATGGCTCTaGACATGTTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: MTHYSAAWKPREMNSLSVLERWL*TCSTAC
Trigger: GCAAGCTGTAGAACATGTCCAGAGCCATCTCTCCAA...CACACTTAATGAATTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp GCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACA +
Preference number: 4 (lower is better)
Translates to: ALSQDKGVELGLMDSILSCFLER*LWTCST
Trigger: TGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACA...GGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CCA 90 bp TTCAGAGTATCAGATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAATCTTCTATGTATGGCTaGAAAAGTGTAGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: FRVSDDTLLCSLETQGDESSMYG*KSVAVT
Trigger: GGTGACGGCTACACTTTTCCAGCCATACATAGAAGA...TTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCATCTGATACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR TCA 90 bp AGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAAGGAGTTTTCTACAGCTTGCTTTaGGAATTGGTGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRHQQLSKPMALSQDKGVFYSLL*ELVCAG
Trigger: TCCAGCACACACCAATTCTCAAAGCAAGCTGTAGAA...AACTCCTTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR GCA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACACGGCCGATGATCCTGTaGACACTGAAGTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTRPMIL*TLKSFM
Trigger: CATGAACGACTTCAGTGTGCACAGGATCATCGGCCG...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp TGGCCCTTGCCTTGGGAGATGTGTCTCAAGATCCTAAGATGTGAATCAGATAAAGCTTGCTTTGAGAATTaGTGTGTGCTGGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPLPWEMCLKILRCESDKACFEN*CVLDRS
Trigger: GCTCCTATCCAGCACACACCAATTCTCAAAGCAAGC...TTTATCTGATTCACATCTTAGGATCTTGAGACACATCTCCCAAGGCAAGGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp TCTGCAGCCTGGAAACCCAGGGAGATGAATTCATTAAGTGTGCAAACAATGCCCTGTTTCTTGGAGAGATaGCTCTGGACATGTTCTACA +
Preference number: 4 (lower is better)
Translates to: SAAWKPREMNSLSVQTMPCFLER*LWTCST
Trigger: TGTAGAACATGTCCAGAGCCATCTCTCCAAGAAACA...GGGCATTGTTTGCACACTTAATGAATTCATCTCCCTGGGTTTCCAGGCTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACGATTTCTTCTATGTATaGCTGGAAAAGTGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHDFFYV*LEKCSR
Trigger: ACGGCTACACTTTTCCAGCCATACATAGAAGAAATC...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CCA 90 bp AGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTGATTTCTTCTATGTATaGCTGGAAAAGTGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: SQDKGVELGLMDSILSGTDFFYV*LEKCSR
Trigger: ACGGCTACACTTTTCCAGCCATACATAGAAGAAATC...AGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR CAA 72 bp GTCCTTCCCCATAGCGTAATCTTCCTCTTGACCAAGTaGCTTATTTTTAGCCTTCCTCCTGGCCTCGATTTT +
Preference number: 4 (lower is better)
Translates to: VLPHSVIFLLTK*LIFSLPPGLDF
Trigger: AAAATCGAGGCCAGGAGGAAGGCTAAAAATAAGCAACTTGGTCAAGAGGAAGATTACGCTATGGGGAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5
CDS-3UTR CCA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCGATTTCTTCTATGTATaGCTGGAAAAGTGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLDFFYV*LEKCSR
Trigger: ACGGCTACACTTTTCCAGCCATACATAGAAGAAATC...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp CCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAAGGATGTCTAAGCACTTCATaGCATACATTTTACCGGTGT +
Preference number: 4 (lower is better)
Translates to: PRRHQQLSKPMALSQDKGCLSTS*HTFYRC
Trigger: ACACCGGTAAAATGTATGCCATGAAGTGCTTAGACA...TCCTTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
3UTR CAA 72 bp TGCCAGTCTGAGGTGCTGTGCTGCGTTCTCTCTTATTaGTCTAAGTTGACAAAAGCAACCAACAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: CQSEVLCCVLSY*SKLTKATNREN
Trigger: ATTTTCTCTGTTGGTTGCTTTTGTCAACTTAGACAAATAAGAGAGAACGCAGCACAGCACCTCAGACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp AAGAAGCAGAAATACAGATGGTTTCCATGGGAACGCACATACGGATTCAATAAACATGAGGCTTCTTTTTaGAGAAATCGCAGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KKQKYRWFPWERTYGFNKHEASF*RNRRQG
Trigger: GCCTTGCCTGCGATTTCTCCAAAAAGAAGCCTCATG...TTTATTGAATCCGTATGTGCGTTCCCATGGAAACCATCTGTATTTCTGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp AAAATGCTAATGTCCACCAAGAATGGAGAAGAGGCTTaGGGCTCATCCTTCTTCATTCCCATAGCAACAAAT +
Preference number: 4 (lower is better)
Translates to: KMLMSTKNGEEA*GSSFFIPIATN
Trigger: ATTTGTTGCTATGGGAATGAAGAAGGATGAGCCCAAAGCCTCTTCTCCATTCTTGGTGGACATTAGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CCA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACATTTCTGTCTTTAATCTaGGTCTCCTCCACAGACATG +
Preference number: 4 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTFLSLI*VSSTDM
Trigger: CATGTCTGTGGAGGAGACCCAGATTAAAGACAGAAA...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
3UTR CAA 72 bp CAAATTGATTTTCAAAGTAATTTACTTACCTATAACTaGAACTGTTTTCATACCCTAGGGTGTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QIDFQSNLLTYN*NCFHTLGCVWV
Trigger: CACCCACACACACCCTAGGGTATGAAAACAGTTCAAGTTATAGGTAAGTAAATTACTTTGAAAATCAATTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CAA 90 bp ATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCTGGTGGGCAGGACGACCTTCTaGCTGGCGCGCGCGGCCGGC +
Preference number: 5 (lower is better)
Translates to: IDGDSKFMHAMHWGHCLVGRTTF*LARAAG
Trigger: GCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGCC...CACCAGACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065167.9
ENSMUST00000200332.5
CDS-3UTR CAA 90 bp CCCCCAAGGCCTCAGGAATTGGACAAGTCCACCGAGACCTTGCAGGACTTCTCATGGCCCCGCAGAAGCTaGAAGAGCATACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PPRPQELDKSTETLQDFSWPRRS*KSIQPR
Trigger: CCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCCA...TGAGAAGTCCTGCAAGGTCTCGGTGGACTTGTCCAATTCCTGAGGCCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp ATGGGGCATGCCAGGGCGCATAGGGGACCGACCGCTGGACACTGTCACCCACCAAGCCTATCCTCTTCGTaGTCCAGCTTCTCATATTCT +
Preference number: 5 (lower is better)
Translates to: MGHARAHRGPTAGHCHPPSLSSS*SSFSYS
Trigger: AGAATATGAGAAGCTGGACAACGAAGAGGATAGGCT...TGGTGGGTGACAGTGTCCAGCGGTCGGTCCCCTATGCGCCCTGGCATGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS CCA 90 bp AGTGTGACAAAGGGCTGGGTTGGGGTCCCCAGAAAGGAAGGTCTGTaGAGGGATAAAGCAGCACACACCAGGGCAATGTATCGCGCACAC +
Preference number: 5 (lower is better)
Translates to: SVTKGWVGVPRKEGL*RDKAAHTRAMYRAH
Trigger: GTGTGCGCGATACATTGCCCTGGTGTGTGCTGCTTTATCCCTCCACAGACCTTCCTTTCTGGGGACCCCAACCCAGCCCTTTGTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CAA 90 bp TTTGTGTGTATGTGTGTGTTACCTACAAAGCAAGTCACACCTCTAGCATCCCATGGCAGGACGACCTTCTaGCTGGCGCGCGCGGCCGGC +
Preference number: 5 (lower is better)
Translates to: FVCMCVLPTKQVTPLASHGRTTF*LARAAG
Trigger: GCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGCC...ATGGGATGCTAGAGGTGTGACTTGCTTTGTAGGTAACACACACATACACACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CAA 90 bp TTGATAATCAGAATGATGGCTCCACTCCCAAGCTGCTGTCAAAGATGTTTTACAGGCAGGACGACCTTCTaGCTGGCGCGCGCGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LIIRMMAPLPSCCQRCFTGRTTF*LARAAG
Trigger: GCCGGCCGCGCGCGCCAGCAAGAAGGTCGTCCTGCC...TGTAAAACATCTTTGACAGCAGCTTGGGAGTGGAGCCATCATTCTGATTATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp GAGGGAAATGGGGTTGAGGGCAGGAGACCCCACCATACACACACCCACACACACAGAAAACACCCCGTGTaGAGAGAGATGGTAGTGCAT +
Preference number: 5 (lower is better)
Translates to: EGNGVEGRRPHHTHTHTHRKHPV*REMVVH
Trigger: ATGCACTACCATCTCTCTCAACACGGGGTGTTTTCT...GTGTGTGTGGGTGTGTGTATGGTGGGGTCTCCTGCCCTCAACCCCATTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp ATTGATGGTGACTCCAAGTTTATGCACGCCATGCATTGGGGGCACTGTCTGGTGGGTTTGTTGAGGAATTaGGGGGCACGGCGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: IDGDSKFMHAMHWGHCLVGLLRN*GARRSS
Trigger: ACTGCTGCGCCGTGCCCCCAAATTCCTCAACAAACC...CACCAGACAGTGCCCCCAATGCATGGCGTGCATAAACTTGGAGTCACCATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp TACCCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAATGGCCCCGCAGAAGCTaGAAGAGCATACAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: YPRRHQQLSKPMALSQDKWPRRS*KSIQPR
Trigger: CCTGGGCTGTATGCTCTTCAAGCTTCTGCGGGGCCA...TTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp GTGTCCCTTGAGCTCCCCTCATTCCCTCCTTGGTGGGTCATCATGCCAAGTGTGGTAAAAATAGCGTCTTaGCCACTGTGTGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VSLELPSFPPWWVIMPSVVKIAS*PLCEKG
Trigger: CCCTTTCTCACACAGTGGCAAAGACGCTATTTTTAC...CACACTTGGCATGATGACCCACCAAGGAGGGAATGAGGGGAGCTCAAGGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAAGAATGGCGGCCCGTGGTTaGTTGAGGAATTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: AVHTLWELNPESWRCKARMAARG*LRNLGA
Trigger: TGCCCCCAAATTCCTCAACAAACCACGGGCCGCCAT...TCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp GGCCTCCTGGCACAGCACCAAGGTGACCACAGGCCATTGCCACCATTCATAATTCGGTCTATCTCATGCTaGTCTTTGGTTTTATGCTGC +
Preference number: 5 (lower is better)
Translates to: GLLAQHQGDHRPLPPFIIRSISC*SLVLCC
Trigger: GCAGCATAAAACCAAAGACAAGCATGAGATAGACCG...AATTATGAATGGTGGCAATGGCCTGTGGTCACCTTGGTGCTGTGCCAGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp CCCGCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAGGGGTCACTCTCACATaGCAAGACAAATTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PAVHTLWELNPESWRCKAGVTLT*QDKLLP
Trigger: GGGAAGCAATTTGTCTTGCAATGTGAGAGTGACCCC...TGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp GTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTGGTTCTACAGCTTGCTTaGAGAATTGGTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VRIKELSLASWIPYSPALVLQLA*RIGVCW
Trigger: CCAGCACACACCAATTCTCAAAGCAAGCTGTAGAAC...CAGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp CTTGAGGTAAAGACAGACCAGGCTCAAGGCATGGAACAAGTAGAACCCAGTCACGTTCTACAGCTTGCTTaGAGAATTGGTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LEVKTDQAQGMEQVEPSHVLQLA*RIGVCW
Trigger: CCAGCACACACCAATTCTCAAAGCAAGCTGTAGAAC...GTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTCTTTACCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CAA 90 bp AGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGGCACTAGAAAACACCCCGTGTaGAGAGAGATGGTAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SQDKGVELGLMDSILSGTRKHPV*REMVVH
Trigger: ATGCACTACCATCTCTCTCAACACGGGGTGTTTTCT...AGTGCCGGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCGTTCTACAGCTTGCTTaGAGAATTGGTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLVLQLA*RIGVCW
Trigger: CCAGCACACACCAATTCTCAAAGCAAGCTGTAGAAC...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp GCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTCCGTAAAAATAGCGTCTTaGCCACTGTGTGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: ALSQDKGVELGLMDSILSVKIAS*PLCEKG
Trigger: CCCTTTCTCACACAGTGGCAAAGACGCTATTTTTAC...GGAGAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCCGGTCTATCTCATGCTaGTCTTTGGTTTTATGCTGC +
Preference number: 5 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLRSISC*SLVLCC
Trigger: GCAGCATAAAACCAAAGACAAGCATGAGATAGACCG...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp ACATCCTCCATCATGATAAGTGATCCAGGCCAGAAACCCAGGTCACTAGTACTCAACAGCTTAATGCCTTaGGTGTCTTCCTCATCGAAG +
Preference number: 5 (lower is better)
Translates to: TSSIMISDPGQKPRSLVLNSLMP*VSSSSK
Trigger: CTTCGATGAGGAAGACACCAAAGGCATTAAGCTGTT...GAGTACTAGTGACCTGGGTTTCTGGCCTGGATCACTTATCATGATGGAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp CCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAAGGAAACAGCTTAATGCCTTaGGTGTCTTCCTCATCGAAG +
Preference number: 5 (lower is better)
Translates to: PRRHQQLSKPMALSQDKGNSLMP*VSSSSK
Trigger: CTTCGATGAGGAAGACACCAAAGGCATTAAGCTGTT...TCCTTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp ATGACACACTACTCTGCAGCCTGGAAACCCAGGGAGATGAATTCATTAAGTGTGAGCCTATCCTCTTCGTaGTCCAGCTTCTCATATTCT +
Preference number: 5 (lower is better)
Translates to: MTHYSAAWKPREMNSLSVSLSSS*SSFSYS
Trigger: AGAATATGAGAAGCTGGACAACGAAGAGGATAGGCT...CACACTTAATGAATTCATCTCCCTGGGTTTCCAGGCTGCAGAGTAGTGTGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS-3UTR CAA 90 bp CCTAGACGTCACCAGCAGTTATCAAAACCCATGGCTCTGAGTCAGGATAAAGGAATCTTCACCCTTTTCTaGTCTAAGCACTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: PRRHQQLSKPMALSQDKGIFTLF*SKHFMA
Trigger: TGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGAT...TCCTTTATCCTGACTCAGAGCCATGGGTTTTGATAACTGCTGGTGACGTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp GCTGTCCACACCCTCTGGGAATTAAACCCAGAATCTTGGAGATGTAAGGCAAGAACATTGCAAGACAAATaGCTTCCCTCCCTTTATCCT +
Preference number: 5 (lower is better)
Translates to: AVHTLWELNPESWRCKARTLQDK*LPSLYP
Trigger: AGGATAAAGGGAGGGAAGCAATTTGTCTTGCAATGT...TCTTGCCTTACATCTCCAAGATTCTGGGTTTAATTCCCAGAGGGTGTGGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp ATGGCTCTGAGTCAGGATAAAGGAGTTGAGCTTGGCCTCATGGATTCCATACTCTTCCTCTTGACCAAGTaGCTTATTTTTAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: MALSQDKGVELGLMDSILFLLTK*LIFSLP
Trigger: AGGAAGGCTAAAAATAAGCAACTTGGTCAAGAGGAA...GAGTATGGAATCCATGAGGCCAAGCTCAACTCCTTTATCCTGACTCAGAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197888.5
CDS-3UTR CAA 90 bp AGTGAGAGAGTTGCACAGCAGAATGCCTCTGCTTCTTCAGTAATTTCGAGTGTGTTCCTCTTGACCAAGTaGCTTATTTTTAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SERVAQQNASASSVISSVFLLTK*LIFSLP
Trigger: AGGAAGGCTAAAAATAAGCAACTTGGTCAAGAGGAA...CACACTCGAAATTACTGAAGAAGCAGAGGCATTCTGCTGTGCAACTCTCTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS-3UTR CAA 90 bp AAGAAGCAGAAATACAGATGGTTTCCATGGGAACGCACATACGGATTCAATAAAATCTTCACCCTTTTCTaGTCTAAGCACTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: KKQKYRWFPWERTYGFNKIFTLF*SKHFMA
Trigger: TGCCATGAAGTGCTTAGACAAGAAAAGGGTGAAGAT...TTTATTGAATCCGTATGTGCGTTCCCATGGAAACCATCTGTATTTCTGCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065167.9
CDS CCA 72 bp AACATAAAGCATCAAGGAGGAAGTGTGACAAAGGGCTaGGTTGGGGTCCCCAGAAAGGAAGGTCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: NIKHQGGSVTKG*VGVPRKEGLWR
Trigger: CCTCCACAGACCTTCCTTTCTGGGGACCCCAACCCAGCCCTTTGTCACACTTCCTCCTTGATGCTTTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197776.2
CDS GCA 72 bp CAGGGCTTCCTCTTCATAAAATTTCACCTGAGGCACTaGTTCCCCAATTTCATTCAAGCAGAAGTCTTTAAA +
Preference number: 6 (lower is better)
Translates to: QGFLFIKFHLRH*FPNFIQAEVFK
Trigger: TTTAAAGACTTCTGCTTGAATGAAATTGGGGAAGCAGTGCCTCAGGTGAAATTTTATGAAGAGGAAGCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000200332.5