Pregenerated sensors for GRIPAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031153Ensembl transcript IDs: ENSMUST00000065932.14, ENSMUST00000101694.10, ENSMUST00000115675.9, ENSMUST00000136930.8, ENSMUST00000140540.2
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTTTACACACATACTCACACACATACACACGTTGCTGGAACATTaGACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: VFTHILTHIHTLLEH*TWTAPPPNTPSPEG Trigger: GCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGTGTGAGTATGTGTGTAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAAAAAGGAAAAGCCTTaGCCTTCCCTCAGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LHPHPIPPVPKAEFSQASKKEKP*PSLRVS Trigger: AGAGACCCTGAGGGAAGGGCAAGGCTTTTCCTTTTT...GGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCGCCCAAGGGAGTGAGTaGCATTCTGGAAAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: GLCHTSGSPTPATYRPLAAQGSE*HSGKDW Trigger: CCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGC...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGGCCCAAGGGAGTGAGTaGCATTCTGGAAAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: THVAGTLNMDCTPTQYPQAQGSE*HSGKDW Trigger: CCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGC...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR GCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAAAAGGAAAAGCCTTaGCCTTCCCTCAGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPKKEKP*PSLRVS Trigger: AGAGACCCTGAGGGAAGGGCAAGGCTTTTCCTTTTT...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGAACAGCCCAAGGGAGTaGGTGACATTCTGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPQGLCHTSGSPTPATYRNSPRE*VTFWKG Trigger: TCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTT...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGAACAGCCCAAGGGAGTaGGTGACATTCTGGAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: THVAGTLNMDCTPTQYPQNSPRE*VTFWKG Trigger: TCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTT...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR CAA 90 bp | AGTCTTTACACACATACTCACACACATACACACGTTGCTGGAACATaGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLYTHTHTHTHVAGT*NMDCTPTQYPQSRR Trigger: CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGTGTGAGTATGTGTGTAAAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCAAAATGAAACAGAGTTaGTCTCTAGGAGGGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSKMKQS*SLGGRS Trigger: AGATCTCCCTCCTAGAGACCAACTCTGTTTCATTTT...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATAAAATGAAACAGAGTTaGTCTCTAGGAGGGAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: PHPIPPVPKAEFSQASRHKMKQS*SLGGRS Trigger: AGATCTCCCTCCTAGAGACCAACTCTGTTTCATTTT...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCAACTATGAAATTTGGTaGCAGCCTCCATATTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GLCHTSGSPTPATYRPLANYEIW*QPPYFP Trigger: GGGAAAATATGGAGGCTGGCACCAAATTTCATAGTT...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATAAAAAAGGAAAAGCCTTaGCCTTCCCTCAGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GWARLARWYFGHIVFTHIKKEKP*PSLRVS Trigger: AGAGACCCTGAGGGAAGGGCAAGGCTTTTCCTTTTT...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCAAAATGAAACAGAGTTaGTCTCTAGGAGGGAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSKMKQS*SLGGRS Trigger: AGATCTCCCTCCTAGAGACCAACTCTGTTTCATTTT...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAGCCCAAGGGAGTGAGTaGCATTCTGGAAAGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: PATYRPLAPLMSISQTMKAQGSE*HSGKDW Trigger: CCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGC...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACCAAACTATGAAATTTaGTGCCAGCCTCCATATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLPNYEI*CQPPYF Trigger: AAAATATGGAGGCTGGCACCAAATTTCATAGTTTGG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATACCAAACTATGAAATTTaGTGCCAGCCTCCATATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFSPRALPYIRVTNTSHIPNYEI*CQPPYF Trigger: AAAATATGGAGGCTGGCACCAAATTTCATAGTTTGG...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATAAACTATGAAATTTGGTaGCAGCCTCCATATTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GWARLARWYFGHIVFTHINYEIW*QPPYFP Trigger: GGGAAAATATGGAGGCTGGCACCAAATTTCATAGTT...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAAAAAGGAAAAGCCTaGCCCTTCCCTCAGGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSQKGKA*PFPQGL Trigger: GAGACCCTGAGGGAAGGGCAAGGCTTTTCCTTTTTG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR GCA 72 bp | ACACATACACACGTTGCTGGAACATTGAACATGGACTaGACCCCCACCCAATACCCCCAGTCCCGAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: THTHVAGTLNMD*TPTQYPQSRRQ Trigger: CTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CAA 90 bp | CTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCACATTCTGGAAAGGATaGGGAATAGTTGCATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHPHPIPPVPKAEFSQASTFWKG*GIVASC Trigger: ACAGGATGCAACTATTCCCAATCCTTTCCAGAATGT...GGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CAA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCAAAAAGGAAAAGCCTaGCCCTTCCCTCAGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: THVAGTLNMDCTPTQYPQQKGKA*PFPQGL Trigger: GAGACCCTGAGGGAAGGGCAAGGCTTTTCCTTTTTG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR-3UTR CAA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCACATTCTGGAAAGGATaGGGAATAGTTGCATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GLCHTSGSPTPATYRPLATFWKG*GIVASC Trigger: ACAGGATGCAACTATTCCCAATCCTTTCCAGAATGT...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR TCA 72 bp | CACATACTCACACACATACACACGTTGCTGGAACATTaGACATGGACTGCACCCCCACCCAATACCCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: HILTHIHTLLEH*TWTAPPPNTPS Trigger: ACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGTGTGAGTATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| 3UTR CCA 72 bp | TCTTTACACACATACTCACACACATACACACGTTGCTaGAACATTGAACATGGACTGCACCCCCACCCAATA | + |
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Preference number: 3 (lower is better) Translates to: SLHTYSHTYTRC*NIEHGLHPHPI Trigger: TATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGTGTGAGTATGTGTGTAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR TCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCGAGGGGGCTGGGCCTaGGGACTGCTGGATAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSRGGWA*GLLDRD Trigger: GTCTCTATCCAGCAGTCCTCAGGCCCAGCCCCCTCG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR TCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCGAGGGGGCTGGGCCTaGGGACTGCTGGATAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRRGGWA*GLLDRD Trigger: GTCTCTATCCAGCAGTCCTCAGGCCCAGCCCCCTCG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCGCAACGCTGCTGCATaGTCCAGACGCTCCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRRNAAA*SRRSPC Trigger: GCAGGGGGAGCGTCTGGAGCATGCAGCAGCGTTGCG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACCGGAGCTCCTCCTCCTaGCGCTTCTTGTCCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDRSSSS*RFLSSC Trigger: GCACGAGGACAAGAAGCGGCAGGAGGAGGAGCTCCG...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | CTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCGGTCTCTCAGGACACTaGCCAGCCCACTTCGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LHPHPIPPVPKAEFSQASGLSGH*PAHFGL Trigger: CAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGACC...GGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCGCTCCTCCTGGGCCTaGTGGAGCTGTTCCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRRSSWA*WSCSRT Trigger: TGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGAGCG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCCTGGGGGATCCCCTTaGCCCTCACCAACAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSPGGSP*PSPTAE Trigger: CTCTGCTGTTGGTGAGGGCCAAGGGGATCCCCCAGG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCTGGGAGCCAGGGGAGTaGGGAGTACGTCTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLAWEPGE*GVRLLG Trigger: CCCCAGGAGACGTACTCCCCACTCCCCTGGCTCCCA...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGCCATCTCGCTCCTCCTaGGCCTGCTGGAGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPPSRSS*ACWSCS Trigger: GGAACAGCTCCAGCAGGCCCAGGAGGAGCGAGATGG...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR TCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACCCTCCCGGCACAGCTTaGGGGTTTCCTCTTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDPPGTA*GFPLVP Trigger: AGGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGG...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATACGCAACGCTGCTGCATaGTCCAGACGCTCCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHIRNAAA*SRRSPC Trigger: GCAGGGGGAGCGTCTGGAGCATGCAGCAGCGTTGCG...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGGAGCTCCTCCTCCTaGCGCTTCTTGTCCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSRSSSS*RFLSSC Trigger: GCACGAGGACAAGAAGCGGCAGGAGGAGGAGCTCCG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTTCTCCTCACGAATCTaGCCCCGGAGCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSFSSRI*PRSSSS Trigger: GGAGGAGGAGCTCCGGGGGCAGATTCGTGAGGAGAA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR GCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGCTCCTCCTGGGCCTaGTGGAGCTGTTCCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSRSSWA*WSCSRT Trigger: TGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGAGCG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATGGGAGCCAGGGGAGTaGGGAGTACGTCTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHIWEPGE*GVRLLG Trigger: CCCCAGGAGACGTACTCCCCACTCCCCTGGCTCCCA...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCATCTCGCTCCTCCTaGGCCTGCTGGAGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLAPSRSS*ACWSCS Trigger: GGAACAGCTCCAGCAGGCCCAGGAGGAGCGAGATGG...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR TCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACAGATCTCCCGGTAGCTaGAGGAGGAGACACTACTGC | + |
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Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDRSPGS*RRRHYC Trigger: GCAGTAGTGTCTCCTCCTTCAGCTACCGGGAGATCT...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR TCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCGTCTCGGCCAGCCTCTaGAACAGCTCAGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLAVSASL*NSSATS Trigger: GGAAGTGGCTGAGCTGTTTCAGAGGCTGGCCGAGAC...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCGCAACGCTGCTGCATaGTCCAGACGCTCCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILRNAAA*SRRSPC Trigger: GCAGGGGGAGCGTCTGGAGCATGCAGCAGCGTTGCG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCCCCAGTTCTTCTTTGTaGTGGGACTTCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHPHPIPPVPKAEFSQASPSSSL*WDFSCS Trigger: GCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGG...GGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAGGAGGAGACACTACTaGTGTCCCCTGTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPRRRHY*CPLSGS Trigger: GGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCT...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACTGGGTGCGAGCCAACTaGGCTTTCAGATCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDWVRAN*AFRSAS Trigger: GGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCA...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATCTGCTGTCCCCTGTCTaGGTCCTGCTTGGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHLLSPV*VLLGEF Trigger: GAACTCACCAAGCAGGACCCAGACAGGGGACAGCAG...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCCACTTCGGTCTGTGTaGCCTGCTGCCACAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSPLRSV*PAATDT Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCCTGGAGCTGCGAGTTaGGGTCATCTTTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRPGAAS*GHLSVP Trigger: TGGGACAGAAAGATGACCTCAACTCGCAGCTCCAGG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCCTCCCGGCACAGCTTaGGGGTTTCCTCTTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSPPGTA*GFPLVP Trigger: AGGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGTCTCGGCCAGCCTCTaGAACAGCTCAGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLVSASL*NSSATS Trigger: GGAAGTGGCTGAGCTGTTTCAGAGGCTGGCCGAGAC...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCGCTTCTTGTCCTCGTaGAGTTCTCGAAGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRRFLSS*SSRSSR Trigger: GCGTGAGCTTCGAGAACTGCACGAGGACAAGAAGCG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGTTCTCCTCACGAATCTaGCCCCGGAGCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRFSSRI*PRSSSS Trigger: GGAGGAGGAGCTCCGGGGGCAGATTCGTGAGGAGAA...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACCGCTCCAAGTGCAGCTaGCGCTTAAGATCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDRSKCS*RLRSLS Trigger: GCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCG...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGCCCCTGTCTGGGTCCTaGTTGGTGAGTTCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPPLSGS*LVSSSQ Trigger: CTGAGATGAACTCACCAAGCAGGACCCAGACAGGGG...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATCCTTCCACTTGTTCCTaGGCATCTGCACTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHPSTCS*ASALWL Trigger: CAGCCAGAGTGCAGATGCGCAGGAACAAGTGGAAGG...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCTCTTCCGAGCTTCCTaGAGATCCTGGGTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSLFRAS*RSWVSC Trigger: GCAGCTAACCCAGGATCTCCAGGAAGCTCGGAAGAG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCTCCTCCTGGGCCTGCTaGAGCTGTTCCCGAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLASSWAC*SCSRTF Trigger: GAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGA...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACTGCTGGATAGAGACCTaGCTGGGATGGCTGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDCWIET*LGWLNS Trigger: AGAGTTCAGCCATCCCAGCCAGGTCTCTATCCAGCA...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACGCTCCCCCTGCCGCTaGTCTCTTAGCTCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGWARLARWYFGHIVFTRSPCR*SLSSAK Trigger: TTTGGCAGAGCTAAGAGATCAGCGGCAGGGGGAGCG...TGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCCACTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065932.14 |
||
| CDS-3UTR TCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCCTGGAGCTGCGAGTTaGGGTCATCTTTCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSPGAAS*GHLSVP Trigger: TGGGACAGAAAGATGACCTCAACTCGCAGCTCCAGG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATCTGGGTCCTGCTTGGTaGGTTCATCTCAGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHLGPAW*VHLRQN Trigger: GTTCTGTCTGAGATGAACTCACCAAGCAGGACCCAG...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCTGGGTCCTGCTTGGTaGGTTCATCTCAGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRLGPAW*VHLRQN Trigger: GTTCTGTCTGAGATGAACTCACCAAGCAGGACCCAG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGGTCTCGGCCAGCCTCTaGAACAGCTCAGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILVSASL*NSSATS Trigger: GGAAGTGGCTGAGCTGTTTCAGAGGCTGGCCGAGAC...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQSSSWL*SFACSI Trigger: GATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGA...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCGCTGCCATGTTCTTCTaGAAGGCTGTGTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSAAMFF*KAVFSA Trigger: GGCAGAGAACACAGCCTTGCAGAAGAACATGGCAGC...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACGCTGTAGTTTTTGGGTaGGAGCCAACTGGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDAVVFG*EPTGLS Trigger: TGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGC...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCCCAGTTCTTCTTTGTaGTGGGACTTCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRPSSSL*WDFSCS Trigger: GCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTTCTCCTCACGAATCTaGCCCCGGAGCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILFSSRI*PRSSSS Trigger: GGAGGAGGAGCTCCGGGGGCAGATTCGTGAGGAGAA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACTCCTGTTGCTGCTGCTaGAAAGATTCCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDSCCCC*KDSSAS Trigger: GGAAGCTGAGGAATCTTTGCAGCAGCAGCAACAGGA...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGTTCTCCAGGATGCGCTaGCCGTCTACTGTGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRFSRMR*PSTVSF Trigger: AAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAA...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATTTCTCCAGGATGCGCTaGCCGTCTACTGTGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHFSRMR*PSTVSF Trigger: AAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAA...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCTTTCTTCTCCAGGATaGGCTGCCCGTCTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSLSSPG*AARLLC Trigger: ACACAGTAGACGGGCAGCGCATCCTGGAGAAGAAAG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCCCTGTCTGGGTCCTaGTTGGTGAGTTCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLAPLSGS*LVSSSQ Trigger: CTGAGATGAACTCACCAAGCAGGACCCAGACAGGGG...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCGGTCTGTGTGGCCTaGTGCCACAGACACATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSVCVA*CHRHIN Trigger: ATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCTCCACTTCTGCCAATaGCATGGGAGCCAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQLHFCQ*HGSQGS Trigger: ACTCCCCTGGCTCCCATGCCATTGGCAGAAGTGGAG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCTGGGTGCGAGCCAACTaGGCTTTCAGATCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLAWVRAN*AFRSAS Trigger: GGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCA...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGTCCTGCTGTAGTTTTTaGGTGCGAGCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPSCCSF*VRANWA Trigger: AGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGA...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCCTTGGCTCCATCCATaGAGTGTACCTGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSPWLHP*SVPEPG Trigger: TCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATCCTCCTGGGCCTGCTaGAGCTGTTCCCGAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHISSWAC*SCSRTF Trigger: GAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGA...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCCCATCTCGCTCCTCCTaGGCCTGCTGGAGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSIPSRSS*ACWSCS Trigger: GGAACAGCTCCAGCAGGCCCAGGAGGAGCGAGATGG...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCTGATGGTCTTCACGTaGCCATCTCGCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRLMVFT*PSRSSW Trigger: CCAGGAGGAGCGAGATGGCCACGTGAAGACCATCAG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCTGCTGTCCCCTGTCTaGGTCCTGCTTGGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQLLSPV*VLLGEF Trigger: GAACTCACCAAGCAGGACCCAGACAGGGGACAGCAG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCTGCTGTCCCCTGTCTaGGTCCTGCTTGGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRLLSPV*VLLGEF Trigger: GAACTCACCAAGCAGGACCCAGACAGGGGACAGCAG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACCACTTCGGTCTGTGTaGCCTGCTGCCACAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLPLRSV*PAATDT Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCACTTCGGTCTGTGTaGCCTGCTGCCACAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRPLRSV*PAATDT Trigger: TGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATACCTGCTTCAGGTTGCTaGTGGTCTTCACGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHIPASGC*WSSRGH Trigger: ATGGCCACGTGAAGACCATCAGCAACCTGAAGCAGG...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCGAGGGGGCTGGGCCTaGGGACTGCTGGATAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSRGGWA*GLLDRD Trigger: GTCTCTATCCAGCAGTCCTCAGGCCCAGCCCCCTCG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCACACATTCCTTGCTaGGCCGCACAATTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRPHIPC*AAQFPG Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAATGTGTGG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTATTTTCCAGCTCCAGCTaGTCCAGCTGGCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLFSSSS*SSWLQS Trigger: GCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAA...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATACACATGTGCTCCAGCTaGTCCAGGAACGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHIHMCSS*SRNAFL Trigger: AAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTG...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCGCTGTAGTTTTTGGGTaGGAGCCAACTGGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSAVVFG*EPTGLS Trigger: TGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGC...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATGCTGTAGTTTTTGGGTaGGAGCCAACTGGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHAVVFG*EPTGLS Trigger: TGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGC...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTGCTGGGACTTCTCCTaGAGCGTCTCCATGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQCWDFS*SVSMAS Trigger: ACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCA...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACGCTTCTTGTCCTCGTaGAGTTCTCGAAGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLRFLSS*SSRSSR Trigger: GCGTGAGCTTCGAGAACTGCACGAGGACAAGAAGCG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCGGAGCTCCTCCTCCTaGCGCTTCTTGTCCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCRSSSS*RFLSSC Trigger: GCACGAGGACAAGAAGCGGCAGGAGGAGGAGCTCCG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGAGGAGGAGACACTACTaGTGTCCCCTGTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILRRRHY*CPLSGS Trigger: GGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCT...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGGTCTGTGTGGCCTGCTaGCACAGACACATCAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQVCVAC*HRHINP Trigger: CGGATTGATGTGTCTGTGGCAGCAGGCCACACAGAC...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCCTGGGGGATCCCCTTaGCCCTCACCAACAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCPGGSP*PSPTAE Trigger: CTCTGCTGTTGGTGAGGGCCAAGGGGATCCCCCAGG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGCTGCCAAACTCTGATTaGCAGCCTCAAGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPLPNSD*QPQVPA Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGTTTGGCAG...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCTGCCAAACTCTGATTaGCAGCCTCAAGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSLPNSD*QPQVPA Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGTTTGGCAG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCTGCCAAACTCTGATTaGCAGCCTCAAGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRLPNSD*QPQVPA Trigger: AGCAGGAACTTGAGGCTGCCAATCAGAGTTTGGCAG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCCTTGGCTCCATCCATaGAGTGTACCTGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQPWLHP*SVPEPG Trigger: TCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATGTTCAAACCAGCCCTTaGCTCCATCCATGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHVQTSP*LHPWSV Trigger: TACACTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGTCCTGCCCTATTTCTTaGAGTTGTTCCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRSCPIS*SCSSSR Trigger: CCGGCTGCTGGAACAACTTCAAGAAATAGGGCAGGA...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCTAGTTCATCCAGCATaGCCTTCCTTTTCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSLVHPA*PSFSRH Trigger: GTGCCGAGAAAAGGAAGGTCATGCTGGATGAACTAG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGAGATCTCCCGGTAGCTaGAGGAGGAGACACTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILRSPGS*RRRHYC Trigger: GCAGTAGTGTCTCCTCCTTCAGCTACCGGGAGATCT...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCACATGTGCTCCAGCTaGTCCAGGAACGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILHMCSS*SRNAFL Trigger: AAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCCTCTTGTTCCTGTTaGTGCTGCTGCAAAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSSCSC*CCCKDS Trigger: GGAATCTTTGCAGCAGCAGCAACAGGAACAAGAGGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCGTGTCCTTTACCTCCTaGTTCAGGTTGCTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSVSFTS*FRLLMV Trigger: GACCATCAGCAACCTGAAGCAGGAGGTAAAGGACAC...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCTTTCTTCTCCAGGATaGGCTGCCCGTCTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQLSSPG*AARLLC Trigger: ACACAGTAGACGGGCAGCGCATCCTGGAGAAGAAAG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACTTTCTTCTCCAGGATaGGCTGCCCGTCTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLLSSPG*AARLLC Trigger: ACACAGTAGACGGGCAGCGCATCCTGGAGAAGAAAG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCGCTCCAAGTGCAGCTaGCGCTTAAGATCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQRSKCS*RLRSLS Trigger: GCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACGTTTCCGCTCCAAGTaGAGCTGCCGCTTAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLRFRSK*SCRLRS Trigger: AGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCGTTTCCGCTCCAAGTaGAGCTGCCGCTTAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRRFRSK*SCRLRS Trigger: AGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCCCCTGTCTGGGTCCTaGTTGGTGAGTTCATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILPLSGS*LVSSSQ Trigger: CTGAGATGAACTCACCAAGCAGGACCCAGACAGGGG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACAGTCTGTGTGGCCTGCTaGCACAGACACATCAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSGWARLARWYFGHIVFTVCVAC*HRHINP Trigger: CGGATTGATGTGTCTGTGGCAGCAGGCCACACAGAC...TGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCCACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065932.14 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATGTTCTTGGTGAGTTaGTCCTCCAACATGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDMFLVS*SSNMFC Trigger: GCAGAACATGTTGGAGGAGCAACTCACCAAGAACAT...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGGCTTCCTGGAGATCCTaGGTTAGCTGCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILASWRS*VSCSFS Trigger: GGAGAAGGAGCAGCTAACCCAGGATCTCCAGGAAGC...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCTCTTCCGAGCTTCCTaGAGATCCTGGGTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILLFRAS*RSWVSC Trigger: GCAGCTAACCCAGGATCTCCAGGAAGCTCGGAAGAG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATACTGATGGTCTTCACGTaGCCATCTCGCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWARLARWYFGHIVFTHILMVFT*PSRSSW Trigger: CCAGGAGGAGCGAGATGGCCACGTGAAGACCATCAG...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCCTTTTGAGCTTTACTaGACTCCTTATCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSPFELY*TPYPGR Trigger: CCTACCTGGATAAGGAGTTCAGTAAAGCTCAAAAGG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCAGTACCTCCACTTCCTaGGCTTTCTTGCTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLASTSTS*AFLLLL Trigger: AAGCAAGAGCAAGAAAGCTCAGGAAGTGGAGGTACT...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTCCTGCCCTATTTCTTaGAGTTGTTCCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILSCPIS*SCSSSR Trigger: CCGGCTGCTGGAACAACTTCAAGAAATAGGGCAGGA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCCACATGTGCTCCAGCTaGTCCAGGAACGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSIHMCSS*SRNAFL Trigger: AAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTG...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACAGCTGCCATGTTCTTCTaGAAGGCTGTGTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGWARLARWYFGHIVFTAAMFF*KAVFSA Trigger: GGCAGAGAACACAGCCTTGCAGAAGAACATGGCAGC...TGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCCACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065932.14 |
||
| CDS-3UTR GCA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACGTTTCCTTCTCTGTCTaGAGACGGCAAAAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTQYPQSRRQSLARLPDVSFSV*RRQKLS Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAGAAGGAAAC...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTGCTGGGACTTCTCCTaGAGCGTCTCCATGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSICWDFS*SVSMAS Trigger: ACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCA...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGTCCTGTTGCTGCTGCTaGAAAGATTCCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRSCCCC*KDSSAS Trigger: GGAAGCTGAGGAATCTTTGCAGCAGCAGCAACAGGA...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACGCTCCTCCTGGGCCTaGTGGAGCTGTTCCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGRSSWA*WSCSRT Trigger: TGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGAGCG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGTGTCCTTTACCTCCTaGTTCAGGTTGCTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLVSFTS*FRLLMV Trigger: GACCATCAGCAACCTGAAGCAGGAGGTAAAGGACAC...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTTCTCCAGGATGCGCTaGCCGTCTACTGTGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILFSRMR*PSTVSF Trigger: AAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTCGGTCTGTGTGGCCTaGTGCCACAGACACATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILSVCVA*CHRHIN Trigger: ATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATATGTCCTTGTGCAAGTaGATGTTCTTGGTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPIPPVPKAEFSQASRHMSLCK*MFLVSC Trigger: GCAACTCACCAAGAACATGCACTTGCACAAGGACAT...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGATGTCCTTGTGCAAGTaGATGTTCTTGGTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPMSLCK*MFLVSC Trigger: GCAACTCACCAAGAACATGCACTTGCACAAGGACAT...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCTCCACTTCTGCCAATaGCATGGGAGCCAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCLHFCQ*HGSQGS Trigger: ACTCCCCTGGCTCCCATGCCATTGGCAGAAGTGGAG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCGCTTCCTGGAGATCCTaGGTTAGCTGCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSIASWRS*VSCSFS Trigger: GGAGAAGGAGCAGCTAACCCAGGATCTCCAGGAAGC...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCCTCTTCCGAGCTTCCTaGAGATCCTGGGTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSILFRAS*RSWVSC Trigger: GCAGCTAACCCAGGATCTCCAGGAAGCTCGGAAGAG...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTGCTGGATAGAGACCTaGCTGGGATGGCTGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILCWIET*LGWLNS Trigger: AGAGTTCAGCCATCCCAGCCAGGTCTCTATCCAGCA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGAGTACCTCCACTTCCTaGGCTTTCTTGCTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRSTSTS*AFLLLL Trigger: AAGCAAGAGCAAGAAAGCTCAGGAAGTGGAGGTACT...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATATCCTGCCCTATTTCTTaGAGTTGTTCCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GWARLARWYFGHIVFTHISCPIS*SCSSSR Trigger: CCGGCTGCTGGAACAACTTCAAGAAATAGGGCAGGA...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCCTCCCGGCACAGCTTaGGGGTTTCCTCTTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSPPGTA*GFPLVP Trigger: AGGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCCTGCTTCAGGTTGCTaGTGGTCTTCACGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCPASGC*WSSRGH Trigger: ATGGCCACGTGAAGACCATCAGCAACCTGAAGCAGG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGGAGCTTTCTTGCTCTTaGTTAGTGCCTTTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRELSCS*LVPFEL Trigger: AAGCTCAAAAGGCACTAAGCAAGAGCAAGAAAGCTC...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSSSSWL*SFACSI Trigger: GATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGA...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCTGCTGGGACTTCTCCTaGAGCGTCTCCATGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCCWDFS*SVSMAS Trigger: ACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCA...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATACCCAGTTCTTCTTTGTaGTGGGACTTCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWARLARWYFGHIVFTHIPSSSL*WDFSCS Trigger: GCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGG...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGTGTTCCTGTTGCTGCTaGTGCAAAGATTCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRCSCCC*CKDSSA Trigger: AGCTGAGGAATCTTTGCAGCAGCAGCAACAGGAACA...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCCGCTCCAAGTGCAGCTaGCGCTTAAGATCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSIRSKCS*RLRSLS Trigger: GCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCG...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCGTCTGTGTGGCCTGCTaGCACAGACACATCAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCVCVAC*HRHINP Trigger: CGGATTGATGTGTCTGTGGCAGCAGGCCACACAGAC...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGGTCTCTCAGGACACTaGCCAGCCCACTTCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGGLSGH*PAHFGL Trigger: CAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGACC...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAGGTCTCTCAGGACACTaGCCAGCCCACTTCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKGLSGH*PAHFGL Trigger: CAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGACC...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCATGTTCTTGGTGAGTTaGTCCTCCAACATGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSMFLVS*SSNMFC Trigger: GCAGAACATGTTGGAGGAGCAACTCACCAAGAACAT...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCACTTCCATGTCCTTGTaGAAGTGCATGTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCHTSGSPTPATYRPLATSMSL*KCMFLV Trigger: CACCAAGAACATGCACTTGCACAAGGACATGGAAGT...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCCTTCCACTTGTTCCTaGGCATCTGCACTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCPSTCS*ASALWL Trigger: CAGCCAGAGTGCAGATGCGCAGGAACAAGTGGAAGG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCAGTTCTTGTGTCTTTaGTGTCTGGATCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQQFLCL*CLDLLQ Trigger: CTGGAGCAGATCCAGACAGCAAAGACACAAGAACTG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCCTTCTGTCGAAGACTaGAAAGTTCAACACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRPSVED*KVQHHS Trigger: AGAATGGTGTTGAACTTTCCAGTCTTCGACAGAAGG...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCTCCACTTCTGCCAATaGCATGGGAGCCAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSLHFCQ*HGSQGS Trigger: ACTCCCCTGGCTCCCATGCCATTGGCAGAAGTGGAG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCTGGGTGCGAGCCAACTaGGCTTTCAGATCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCWVRAN*AFRSAS Trigger: GGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCA...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATATCCTGCTGTAGTTTTTaGGTGCGAGCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWARLARWYFGHIVFTHISCCSF*VRANWA Trigger: AGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGA...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGAGCCGCACAATTTCCTaGGATAGAACTTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLCHTSGSPTPATYRSRTIS*DRTSMS Trigger: GGACATGGAAGTTCTATCCCAGGAAATTGTGCGGCT...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCTTCCACTGTGTGCTaGAGATTTTCTAATTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSSTVC*RFSNSL Trigger: AAGGGAATTAGAAAATCTTCAGCACACAGTGGAAGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGTCTTCCACTGTGTGCTaGAGATTTTCTAATTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTLNMDCTPTQYPQSRRSSTVC*RFSNSL Trigger: AAGGGAATTAGAAAATCTTCAGCACACAGTGGAAGA...CCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCCACACATTCCTTGCTaGGCCGCACAATTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSPHIPC*AAQFPG Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAATGTGTGG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATAGCTTTTGAGCTTTACTaGACTCCTTATCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHIAFELY*TPYPGR Trigger: CCTACCTGGATAAGGAGTTCAGTAAAGCTCAAAAGC...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101694.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTTTTTCCAGCTCCAGCTaGTCCAGCTGGCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSFSSSS*SSWLQS Trigger: GCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAA...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCGCTGCCATGTTCTTCTaGAAGGCTGTGTTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCAAMFF*KAVFSA Trigger: GGCAGAGAACACAGCCTTGCAGAAGAACATGGCAGC...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCGCTTCTTGTCCTCGTaGAGTTCTCGAAGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSRFLSS*SSRSSR Trigger: GCGTGAGCTTCGAGAACTGCACGAGGACAAGAAGCG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTGTTCCTGTTGCTGCTaGTGCAAAGATTCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILCSCCC*CKDSSA Trigger: AGCTGAGGAATCTTTGCAGCAGCAGCAACAGGAACA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTCCTCTTGTTCCTGTTaGTGCTGCTGCAAAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILSSCSC*CCCKDS Trigger: GGAATCTTTGCAGCAGCAGCAACAGGAACAAGAGGA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCTCGGTCTGTGTGGCCTaGTGCCACAGACACATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCSVCVA*CHRHIN Trigger: ATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGA...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGATGTCCTTGTGCAAGTaGATGTTCTTGGTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQMSLCK*MFLVSC Trigger: GCAACTCACCAAGAACATGCACTTGCACAAGGACAT...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGACTTCCATGTCCTTGTaGAAGTGCATGTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQTSMSL*KCMFLV Trigger: CACCAAGAACATGCACTTGCACAAGGACATGGAAGT...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCCTTGGCTCCATCCATaGAGTGTACCTGAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSPWLHP*SVPEPG Trigger: TCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATAGTTCAAACCAGCCCTTaGCTCCATCCATGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GWARLARWYFGHIVFTHIVQTSP*LHPWSV Trigger: TACACTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCGTTCAAACCAGCCCTTaGCTCCATCCATGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSIVQTSP*LHPWSV Trigger: TACACTCCATGGATGGAGCCAAGGGCTGGTTTGAAC...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAATCCTCCTGGGCCTGCTaGAGCTGTTCCCGAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKSSWAC*SCSRTF Trigger: GAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGA...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAACTGATGGTCTTCACGTaGCCATCTCGCTCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKLMVFT*PSRSSW Trigger: CCAGGAGGAGCGAGATGGCCACGTGAAGACCATCAG...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| 3UTR CAA 72 bp | ACACATACTCACACACATACACACGTTGCTGGAACATaGAACATGGACTGCACCCCCACCCAATACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHVAGT*NMDCTPTQYPQ Trigger: CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGTATGTGTGTGAGTATGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCTCTTCCACTGTGTGCTaGAGATTTTCTAATTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSSSTVC*RFSNSL Trigger: AAGGGAATTAGAAAATCTTCAGCACACAGTGGAAGA...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACCTGCTTCAGGTTGCTaGTGGTCTTCACGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGPASGC*WSSRGH Trigger: ATGGCCACGTGAAGACCATCAGCAACCTGAAGCAGG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAAGATCTCCCGGTAGCTaGAGGAGGAGACACTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKRSPGS*RRRHYC Trigger: GCAGTAGTGTCTCCTCCTTCAGCTACCGGGAGATCT...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAACCACACATTCCTTGCTaGGCCGCACAATTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKPHIPC*AAQFPG Trigger: CCCAGGAAATTGTGCGGCTCAGCAAGGAATGTGTGG...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGGAGCTTTCTTGCTCTTaGTTAGTGCCTTTTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQELSCS*LVPFEL Trigger: AAGCTCAAAAGGCACTAAGCAAGAGCAAGAAAGCTC...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGCTTCCTGAGCTTTCTTaGTCTTGCTTAGTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQLPELS*SCLVPF Trigger: AAAAGGCACTAAGCAAGAGCAAGAAAGCTCAGGAAG...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQQPKGVSDILERIGNSCLAVQL*LQHLIF Trigger: GAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAG...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGATAAGTGTACTGTTCTaGAAACGGAAGTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILISVLF*KRKSSS Trigger: GGAGGAGGACTTCCGTTTGCAGAACAGTACACTTAT...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGATTTTCCAGCTCCAGCTaGTCCAGCTGGCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGFSSSS*SSWLQS Trigger: GCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAA...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACAATGTTCTTGGTGAGTTaGTCCTCCAACATGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGWARLARWYFGHIVFTMFLVS*SSNMFC Trigger: GCAGAACATGTTGGAGGAGCAACTCACCAAGAACAT...TGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCCACTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065932.14 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTTCCTGCTGTAGTTTTTaGGTGCGAGCCAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSSCCSF*VRANWA Trigger: AGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGA...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGCTTCCTGGAGATCCTaGGTTAGCTGCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGASWRS*VSCSFS Trigger: GGAGAAGGAGCAGCTAACCCAGGATCTCCAGGAAGC...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTTGCTGGATAGAGACCTaGCTGGGATGGCTGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSCWIET*LGWLNS Trigger: AGAGTTCAGCCATCCCAGCCAGGTCTCTATCCAGCA...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCAGCCGCACAATTTCCTaGGATAGAACTTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSISRTIS*DRTSMS Trigger: GGACATGGAAGTTCTATCCCAGGAAATTGTGCGGCT...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACTGGGTCCTGCTTGGTaGGTTCATCTCAGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGLGPAW*VHLRQN Trigger: GTTCTGTCTGAGATGAACTCACCAAGCAGGACCCAG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGGTTTCCTTCTCTGTCTaGAGACGGCAAAAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILVSFSV*RRQKLS Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAGAAGGAAAC...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACGTTTCCGCTCCAAGTaGAGCTGCCGCTTAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGRFRSK*SCRLRS Trigger: AGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCTCCAACATGTTCTaGAGCTTCTTGTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THVAGTLNMDCTPTQYPQSSNMF*SFLFIS Trigger: AGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGA...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATCCTCCAACATGTTCTaGAGCTTCTTGTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSPRALPYIRVTNTSHISSNMF*SFLFIS Trigger: AGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGA...TATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCCTTCTGTCGAAGACTaGAAAGTTCAACACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GASLHIFPQQPKGVSDILPSVED*KVQHHS Trigger: AGAATGGTGTTGAACTTTCCAGTCTTCGACAGAAGG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACTAGTTCATCCAGCATaGCCTTCCTTTTCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGLVHPA*PSFSRH Trigger: GTGCCGAGAAAAGGAAGGTCATGCTGGATGAACTAG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAACTAGTTCATCCAGCATaGCCTTCCTTTTCTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKLVHPA*PSFSRH Trigger: GTGCCGAGAAAAGGAAGGTCATGCTGGATGAACTAG...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAATCCTGTTGCTGCTGCTaGAAAGATTCCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKSCCCC*KDSSAS Trigger: GGAAGCTGAGGAATCTTTGCAGCAGCAGCAACAGGA...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCCTTTTGAGCTTTACTaGACTCCTTATCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSPFELY*TPYPGR Trigger: CCTACCTGGATAAGGAGTTCAGTAAAGCTCAAAAGG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCTCCAACATGTTCTaGAGCTTCTTGTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSPTPATYRPLAPLMSISSNMF*SFLFIS Trigger: AGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGA...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAAGCCGCACAATTTCCTaGGATAGAACTTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGSRTIS*DRTSMS Trigger: GGACATGGAAGTTCTATCCCAGGAAATTGTGCGGCT...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAATAAGTGTACTGTTCTaGAAACGGAAGTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTMKFGASLHIFPQQPKGISVLF*KRKSSS Trigger: GGAGGAGGACTTCCGTTTGCAGAACAGTACACTTAT...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCCTTCTGTCGAAGACTaGAAAGTTCAACACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKFGASLHIFPQQPKGVSPSVED*KVQHHS Trigger: AGAATGGTGTTGAACTTTCCAGTCTTCGACAGAAGG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAACTTCCTGAGCTTTCTTaGTCTTGCTTAGTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKLPELS*SCLVPF Trigger: AAAAGGCACTAAGCAAGAGCAAGAAAGCTCAGGAAG...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAGTTTCCTTCTCTGTCTaGAGACGGCAAAAACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PATYRPLAPLMSISQTMKVSFSV*RRQKLS Trigger: AGAAAGTTTTTGCCGTCTGCAGACAGAGAAGGAAAC...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | AGCTCACGCTCGTATCGGGCTCGCACGCCCAGCAGCTCCTTCTCGTaGCGTAACCGGACGGCCCCCAGTTCTTCTTTGTGCTGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSYRARTPSSSFS*RNRTAPSSSLCWDF Trigger: GAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAAGGAGCTGCTGGGCGTGCGAGCCCGATACGAGCGTGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS TCA 90 bp | CCATCTCGCTCCTCCTGGGCCTGCTGGAGCTGTTCCCGAACATTCTaGAGCTCTTCATCCTTGCCCTTCAGCTCAGCGGCGTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRSSWACWSCSRTF*SSSSLPFSSAACSS Trigger: GGAGGAGCACGCCGCTGAGCTGAAGGGCAAGGATGAAGAGCTTCAGAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGAGCGAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 90 bp | GCTCCCCGTCCACATGTGCTCCAGCTGCTCCAGGAACGCCTTCCTTaGGTTGTCGGTTTTCCAGCTCCAGCTGCTCCAGCTGGCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: APRPHVLQLLQERLP*VVGFPAPAAPAGCK Trigger: TTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTGGACGGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 90 bp | AGCTCCTCGAGGCCTGTGCGGCTCTTGCTGTTGGTAAGGATCTCCTaGAGCCGTTCCTGCAGCTTATCAGCCCGTTTCCGCTCCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRPVRLLLLVRIS*SRSCSLSARFRSKC Trigger: GCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCACAGGCCTCGAGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 90 bp | GAAGGAGGAGACACTACTGCTGTCCCCTGTCTGGGTCCTGCTTGGTaGGTTCATCTCAGACAGAACCAGCTCCTCGAGGCCTGTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGGDTTAVPCLGPAW*VHLRQNQLLEACAA Trigger: AGCCGCACAGGCCTCGAGGAGCTGGTTCTGTCTGAGATGAACTCACCAAGCAGGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | AGCTCCTTCTCGTGCCGTAACCGGACGGCCCCCAGTTCTTCTTTGTaGTGGGACTTCTCCTGCAGCGTCTCCATGGCTAGTTCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSFSCRNRTAPSSSL*WDFSCSVSMASSSS Trigger: GCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAAGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 90 bp | CCTGTGCGGCTCTTGCTGTTGGTAAGGATCTCCTGCAGCCGTTCCTaGAGCTTATCAGCCCGTTTCCGCTCCAAGTGCAGCTGCCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PVRLLLLVRISCSRS*SLSARFRSKCSCRL Trigger: TAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | CTCGAAGGTTCTCATCGCCTGGCTTCACTAGGTCTCTCAGGACACTaGCCAGCCCACTTCGGTCTGTGTGGCCTGCTGCCACAGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: LEGSHRLASLGLSGH*PAHFGLCGLLPQTH Trigger: ATGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGACCTAGTGAAGCCAGGCGATGAGAACCTTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATGCCCCCAGTTCTTCTTaGTGCTGGGACTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPIPPVPKAEFSQASRHAPSSS*CWDFSC Trigger: GCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGC...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCCTCCCGGCACAGCTaGAGGGTTTCCTCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSSRHS*RVSSCS Trigger: GGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGTCCTCCCGGCACAGCTaGAGGGTTTCCTCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPSSRHS*RVSSCS Trigger: GGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGA...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACACCTCCTGCTTCAGGTaGCTGATGGTCTTCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPTQYPQSRRQSLARLPDTSCFR*LMVFTW Trigger: CCACGTGAAGACCATCAGCAACCTGAAGCAGGAGGT...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 90 bp | CATCCTTGCCCTTCAGCTCAGCGGCGTGCTCCTCCCGGCACAGCTTaGGGGTTTCCTCTTGTTCCTGTTGCTGCTGCTGCAAAGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPCPSAQRRAPPGTA*GFPLVPVAAAAKIP Trigger: AGGAATCTTTGCAGCAGCAGCAACAGGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGAGCACGCCGCTGAGCTGAAGGGCAAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CCA 90 bp | TCCTTCTCGTGCCGTAACCGGACGGCCCCCAGTTCTTCTTTGTGCTaGGACTTCTCCTGCAGCGTCTCCATGGCTAGTTCATCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFSCRNRTAPSSSLC*DFSCSVSMASSSSM Trigger: CATGCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCCTGGAGCTGCGAGTaGAGGTCATCTTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSWSCE*RSSFCP Trigger: GGGACAGAAAGATGACCTCAACTCGCAGCTCCAGGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATTCCTGGAGCTGCGAGTaGAGGTCATCTTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPIPPVPKAEFSQASRHSWSCE*RSSFCP Trigger: GGGACAGAAAGATGACCTCAACTCGCAGCTCCAGGA...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | GGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCTCCTCCCGGCACAGCTaGAGGGTTTCCTCTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLCHTSGSPTPATYRPLASSRHS*RVSSCS Trigger: GGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGA...GGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCGACCCCACACATTCCTaGCTGAGCCGCACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSDPTHS*LSRTIS Trigger: GGAAATTGTGCGGCTCAGCAAGGAATGTGTGGGGTC...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATGACCCCACACATTCCTaGCTGAGCCGCACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPIPPVPKAEFSQASRHDPTHS*LSRTIS Trigger: GGAAATTGTGCGGCTCAGCAAGGAATGTGTGGGGTC...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 90 bp | CTGGGATGGCTGAACTCTCCTTCTCCTTCAAGATCTCCCGGTAGCTaGAGGAGGAGACACTACTGCTGTCCCCTGTCTGGGTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGWLNSPSPSRSPGS*RRRHYCCPLSGSCL Trigger: CAAGCAGGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCTTCAGCTACCGGGAGATCTTGAAGGAGAAGGAGAGTTCAGCCATCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | TTCTTCTCCAGGATGCGCTGCCCGTCTACTGTGTCCTTTACCTCCTaGTTCAGGTTGCTGATGGTCTTCACGTGGCCATCTCGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FFSRMRCPSTVSFTS*FRLLMVFTWPSRSS Trigger: GGAGGAGCGAGATGGCCACGTGAAGACCATCAGCAACCTGAAGCAGGAGGTAAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | AGCCGTTCCTGCAGCTTATCAGCCCGTTTCCGCTCCAAGTGCAGCTaGCGCTTAAGATCTTTGAGCACAGCGCTGCCTTTCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSCSLSARFRSKCS*RLRSLSTALPFFSR Trigger: CCTGGAGAAGAAAGGCAGCGCTGTGCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 90 bp | TCCTGCAGCCGTTCCTGCAGCTTATCAGCCCGTTTCCGCTCCAAGTaGAGCTGCCGCTTAAGATCTTTGAGCACAGCGCTGCCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSRSCSLSARFRSK*SCRLRSLSTALPFF Trigger: GAAGAAAGGCAGCGCTGTGCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACAAAGCTGGTAGTTATTaGTCCGGAGCTCCAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPTQYPQSRRQSLARLPDKAGSY*SGAPGA Trigger: AGCTCCTGGAGCTCCGGACAAATAACTACCAGCTTT...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPPGCAA*PAASHF Trigger: AAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGG...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAGCTGGCTGCAAAGCTaGCTGAACTCGGCCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPSWLQS*LNSAIS Trigger: ACTTATGGCCGAGTTCAGCAAGCTTTGCAGCCAGCT...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGGCCCCCAGTTCTTCTTaGTGCTGGGACTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPQGLCHTSGSPTPATYRAPSSS*CWDFSC Trigger: GCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGC...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGTTCAAACCAGCCCTaGGCTCCATCCATGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSRSNQP*APSMEC Trigger: ACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCTTGAGGGTTTCCTCTaGTTCCTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSLEGFL*FLLLLL Trigger: CAGCAGCAGCAACAGGAACAAGAGGAAACCCTCAAG...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGGTGCGGCTCTTGCTGTaGGTAAGGATCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: THVAGTLNMDCTPTQYPQVRLLL*VRISCS Trigger: GCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCAC...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS-3UTR CAA 90 bp | CTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCCATGTTCTTGGTGAGTaGCTCCTCCAACATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHPHPIPPVPKAEFSQASHVLGE*LLQHVL Trigger: CAGAACATGTTGGAGGAGCAACTCACCAAGAACATG...GGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 90 bp | GCTGGGACTTCTCCTGCAGCGTCTCCATGGCTAGTTCATCCAGCATaGCCTTCCTTTTCTCGGCACTCTTCCGAGCTTCCTGGAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTSPAASPWLVHPA*PSFSRHSSELPGDP Trigger: AGGATCTCCAGGAAGCTCGGAAGAGTGCCGAGAAAAGGAAGGTCATGCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 90 bp | AGCTGGCTGCAAAGCTTGCTGAACTCGGCCATAAGTGTACTGTTCTaGAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWLQSLLNSAISVLF*KRKSSSWLCSFACS Trigger: GCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACACTTATGGCCGAGTTCAGCAAGCTTTGCAGCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | GCTCCAGGAACGCCTTCCTTGAGTTGTCGGTTTTCCAGCTCCAGCTaGTCCAGCTGGCTGCAAAGCTTGCTGAACTCGGCCATAAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: APGTPSLSCRFSSSS*SSWLQSLLNSAISV Trigger: TACACTTATGGCCGAGTTCAGCAAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGTTCCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | CGTAACCGGACGGCCCCCAGTTCTTCTTTGTGCTGGGACTTCTCCTaGAGCGTCTCCATGGCTAGTTCATCCAGCATGACCTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNRTAPSSSLCWDFS*SVSMASSSSMTFLF Trigger: GAAAAGGAAGGTCATGCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCAAAGCTGGTAGTTATTaGTCCGGAGCTCCAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSKAGSY*SGAPGA Trigger: AGCTCCTGGAGCTCCGGACAAATAACTACCAGCTTT...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGTCCTGGAGCTGCGAGTaGAGGTCATCTTTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPQGLCHTSGSPTPATYRSWSCE*RSSFCP Trigger: GGGACAGAAAGATGACCTCAACTCGCAGCTCCAGGA...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGTGGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACAGTGCGGCTCTTGCTGTaGGTAAGGATCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSGWARLARWYFGHIVFTVRLLL*VRISCS Trigger: GCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCAC...TGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065932.14 |
||
| CDS-3UTR CAA 90 bp | ACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACCATGTTCTTGGTGAGTaGCTCCTCCAACATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPTQYPQSRRQSLARLPDHVLGE*LLQHVL Trigger: CAGAACATGTTGGAGGAGCAACTCACCAAGAACATG...GTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGGACCCCACACATTCCTaGCTGAGCCGCACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPQGLCHTSGSPTPATYRDPTHS*LSRTIS Trigger: GGAAATTGTGCGGCTCAGCAAGGAATGTGTGGGGTC...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS TCA 90 bp | CTCCAGGTTCTAGGTCTGGGTCAGGGGACCCCACACATTCCTTGCTaGGCCGCACAATTTCCTGGGATAGAACTTCCATGTCCTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQVLGLGQGTPHIPC*AAQFPGIELPCPCA Trigger: TGCACAAGGACATGGAAGTTCTATCCCAGGAAATTGTGCGGCTCAGCAAGGAATGTGTGGGGTCCCCTGACCCAGACCTAGAACCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CCA 90 bp | ACGCCTTCCTTGAGTTGTCGGTTTTCCAGCTCCAGCTGCTCCAGCTaGCTGCAAAGCTTGCTGAACTCGGCCATAAGTGTACTGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSLSCRFSSSSCSS*LQSLLNSAISVLFC Trigger: GCAGAACAGTACACTTATGGCCGAGTTCAGCAAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS CCA 90 bp | CAGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTGGCTCCATCCATaGAGTGTACCTGAGCCTGGAGTTCTTCCACTGTGTGCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLPSSAVQTSPWLHP*SVPEPGVLPLCAED Trigger: ATCTTCAGCACACAGTGGAAGAACTCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CCA 90 bp | GCAAAGATTCCTCAGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAGTGTACCTGAGCCTGGAGTTCTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AKIPQLPSSAVQTSP*LHPWSVPEPGVLPL Trigger: CAGTGGAAGAACTCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCTGAGGAATCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCGCCCCCAGTTCTTCTTaGTGCTGGGACTTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSPTPATYRPLAPLMSIAPSSS*CWDFSC Trigger: GCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGC...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACTTGAGGGTTTCCTCTaGTTCCTGTTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLLEGFL*FLLLLL Trigger: CAGCAGCAGCAACAGGAACAAGAGGAAACCCTCAAG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCTCAGTTCTTGTGTCTTaGCTGTCTGGATCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSSVLVS*LSGSAP Trigger: TGGAGCAGATCCAGACAGCAAAGACACAAGAACTGA...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GASLHIFPQQPKGVSDILPGCAA*PAASHF Trigger: AAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGG...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCAGGTTTCAGCTTGCTTaGAGCTCTCTAAGCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EHGLHPHPIPPVPKAEFSRFQLA*SSLSLV Trigger: TACAAGGCTTAGAGAGCTCAAAGCAAGCTGAAACCT...GCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCCCTATTTCTTGAAGTaGTTCCAGCAGCCGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSPYFLK*FQQPAI Trigger: AATAGCCGGCTGCTGGAACAACTTCAAGAAATAGGG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCACCTCCTGCTTCAGGTaGCTGATGGTCTTCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSPTPATYRPLAPLMSITSCFR*LMVFTW Trigger: CCACGTGAAGACCATCAGCAACCTGAAGCAGGAGGT...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCGTGCGGCTCTTGCTGTaGGTAAGGATCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQQPKGVSDILERIGNSCVRLLL*VRISCS Trigger: GCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCAC...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCATGTTCTTGGTGAGTaGCTCCTCCAACATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSHVLGE*LLQHVL Trigger: CAGAACATGTTGGAGGAGCAACTCACCAAGAACATG...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGCCCGTCTGGCCAGATGGTATTTTGGCCACATAGTCTTTACACACATACAAGAGCCCTTCCACTaGTTCCTGCGCATCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GWARLARWYFGHIVFTHIQEPFH*FLRICT Trigger: AGTGCAGATGCGCAGGAACAAGTGGAAGGGCTCTTG...TATGTGTGTAAAGACTATGTGGCCAAAATACCATCTGGCCAGACGGGCCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGGTCACCAACACCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCCAAGAGCCCTTCCACTaGTTCCTGCGCATCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SGSPTPATYRPLAPLMSIQEPFH*FLRICT Trigger: AGTGCAGATGCGCAGGAACAAGTGGAAGGGCTCTTG...GATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGGTGTTGGTGACCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS TCA 90 bp | CCAGCTCCAGCTGCTCCAGCTGGCTGCAAAGCTTTTGAGCTTTACTaGACTCCTTATCCAGGTAGGCGACCTTCTGTCGAAGACTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPAAPAGCKAFELY*TPYPGRRPSVEDWK Trigger: TTTCCAGTCTTCGACAGAAGGTCGCCTACCTGGATAAGGAGTTCAGTAAAGCTCAAAAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101694.10 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS GCA 90 bp | TGTACTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTCACTCAGCAGTACCTCCACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTVLQTEVLLLAVQL*LQHLIFTQQYLHFL Trigger: CAGGAAGTGGAGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | GCCATAAGTGTACTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATCTCATTTTCACTCAGCAGTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AISVLFCKRKSSSWL*SFACSISFSLSSTS Trigger: GGAGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACACTTATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | CCAAACTCTGATTGGCAGCCTCAAGTTCCTGCTGTAGTTTTTGGGTaGGAGCCAACTGGGCTTTCAGATCAGCTTCCTTCCGCTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNSDWQPQVPAVVFG*EPTGLSDQLPSAVA Trigger: TGCAACAGCGGAAGGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGAACTTGAGGCTGCCAATCAGAGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGCCCTATTTCTTGAAGTaGTTCCAGCAGCCGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SPQGLCHTSGSPTPATYRPYFLK*FQQPAI Trigger: AATAGCCGGCTGCTGGAACAACTTCAAGAAATAGGG...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CCA 90 bp | AACTCGGCCATAAGTGTACTGTTCTGCAAACGGAAGTCCTCCTCCTaGCTGTGCAGCTTTGCCTGCAGCATCTCATTTTCACTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NSAISVLFCKRKSSS*LCSFACSISFSLSS Trigger: ACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACACTTATGGCCGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCAAGGGCTCTGCCATACATCAGGGTCACCAACACCAGCCACATATAGGAGGTTTCAGCTTGCTTaGAGCTCTCTAAGCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPQGLCHTSGSPTPATYRRFQLA*SSLSLV Trigger: TACAAGGCTTAGAGAGCTCAAAGCAAGCTGAAACCT...CCTATATGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAGCTTCCTTCCGCTGTaGCAATTCTTCAATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RCWNIEHGLHPHPIPPVPSFLPL*QFFNFV Trigger: AACAAAATTGAAGAATTGCAACAGCGGAAGGAAGCT...CGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTAGCCAGGCTTCCAGACATAAGCATATTCAGTTCTaGTGTCTTTGCTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHPIPPVPKAEFSQASRHKHIQF*CLCCLD Trigger: ATCCAGACAGCAAAGACACAAGAACTGAATATGCTT...ATGTCTGGAAGCCTGGCTAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTCGTTCAAACCAGCCCTaGGCTCCATCCATGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MKFGASLHIFPQQPKGVSRSNQP*APSMEC Trigger: ACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACG...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | TTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCCGAAGGCAGAGTTTACTGGCTGCAAAGCTTTaGAGCTTTACTGAACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LNMDCTPTQYPQSRRQSLLAAKL*SFTELL Trigger: AAGGAGTTCAGTAAAGCTCAAAAGCTTTGCAGCCAG...TAAACTCTGCCTTCGGGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101694.10 |
||
| CDS-3UTR CAA 90 bp | GGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTGACATTCTGTCAGTTCTTGTGTCTTaGCTGTCTGGATCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GASLHIFPQQPKGVSDILSVLVS*LSGSAP Trigger: TGGAGCAGATCCAGACAGCAAAGACACAAGAACTGA...CAGAATGTCACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGTCCAGCTTCCTTCCGCTGTaGCAATTCTTCAATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HVAGTLNMDCTPTQYPQSSFLPL*QFFNFV Trigger: AACAAAATTGAAGAATTGCAACAGCGGAAGGAAGCT...GGACTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAACGTTCAAACCAGCCCTaGGCTCCATCCATGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PATYRPLAPLMSISQTMKRSNQP*APSMEC Trigger: ACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACG...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAACCTCCTGCTTCAGGTaGCTGATGGTCTTCACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PATYRPLAPLMSISQTMKTSCFR*LMVFTW Trigger: CCACGTGAAGACCATCAGCAACCTGAAGCAGGAGGT...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | ACACACGTTGCTGGAACATTGAACATGGACTGCACCCCCACCCAATACCCCCAGAAGCATATTCAGTTCTaGTGTCTTTGCTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: THVAGTLNMDCTPTQYPQKHIQF*CLCCLD Trigger: ATCCAGACAGCAAAGACACAAGAACTGAATATGCTT...CTGGGGGTATTGGGTGGGGGTGCAGTCCATGTTCAATGTTCCAGCAACGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | TTGTGCAAGTGCATGTTCTTGGTGAGTTGCTCCTCCAACATGTTCTaGAGCTTCTTGTTCATTTCTCGAAGGTTCTCATCGCCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCKCMFLVSCSSNMF*SFLFISRRFSSPGF Trigger: GAAGCCAGGCGATGAGAACCTTCGAGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGAGCAACTCACCAAGAACATGCACTTGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS TCA 90 bp | CCTGGGATAGAACTTCCATGTCCTTGTGCAAGTGCATGTTCTTGGTaGGTTGCTCCTCCAACATGTTCTGCAGCTTCTTGTTCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGIELPCPCASACSW*VAPPTCSAASCSFL Trigger: GAGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGAGCAACTCACCAAGAACATGCACTTGCACAAGGACATGGAAGTTCTATCCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CAAACTATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGACCCTATTTCTTGAAGTaGTTCCAGCAGCCGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QTMKFGASLHIFPQQPKGPYFLK*FQQPAI Trigger: AATAGCCGGCTGCTGGAACAACTTCAAGAAATAGGG...TCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCATAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 90 bp | GATAGAACTTCCATGTCCTTGTGCAAGTGCATGTTCTTGGTGAGTTaGTCCTCCAACATGTTCTGCAGCTTCTTGTTCATTTCTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRTSMSLCKCMFLVS*SSNMFCSFLFISRR Trigger: CCTTCGAGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGAGCAACTCACCAAGAACATGCACTTGCACAAGGACATGGAAGTTCTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCCACATATAGGCCTCTAGCCCCTTTAATGTCCATCTCCCAAACTATGAAAAGGTTTCAGCTTGCTTaGAGCTCTCTAAGCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PATYRPLAPLMSISQTMKRFQLA*SSLSLV Trigger: TACAAGGCTTAGAGAGCTCAAAGCAAGCTGAAACCT...TTTCATAGTTTGGGAGATGGACATTAAAGGGGCTAGAGGCCTATATGTGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | CCACAACAGCCCAAGGGAGTGAGTGACATTCTGGAAAGGATTGGGAATAGTTGCAGCTTCCTTCCGCTGTaGCAATTCTTCAATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PQQPKGVSDILERIGNSCSFLPL*QFFNFV Trigger: AACAAAATTGAAGAATTGCAACAGCGGAAGGAAGCT...GCAACTATTCCCAATCCTTTCCAGAATGTCACTCACTCCCTTGGGCTGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTTGGTGCCAGCCTCCATATTTTCCCACAACAGCCCAAGGGAGTGAGTAAGCATATTCAGTTCTaGTGTCTTTGCTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MKFGASLHIFPQQPKGVSKHIQF*CLCCLD Trigger: ATCCAGACAGCAAAGACACAAGAACTGAATATGCTT...ACTCACTCCCTTGGGCTGTTGTGGGAAAATATGGAGGCTGGCACCAAATTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CCA 90 bp | CTTCATATTCAGCTTGACGATGCTGTAACTCAGATGCCAATTCACTaGTCTGTTCCCGAAGCATATTCAGTTCTTGTGTCTTTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHIQLDDAVTQMPIH*SVPEAYSVLVSLLS Trigger: AGACAGCAAAGACACAAGAACTGAATATGCTTCGGGAACAGACCAGTGAATTGGCATCTGAGTTACAGCATCGTCAAGCTGAATATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS GCA 72 bp | CTCTGCCTGCAGCCTCAGCAGCTCCCCGTCCACATGTaGTCCAGCTGCTCCAGGAACGCCTTCCTTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCLQPQQLPVHM*SSCSRNAFLEL Trigger: CAACTCAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTGGACGGGGAGCTGCTGAGGCTGCAGGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS GCA 72 bp | CAGGACACTGCCCAGCCCACTTCGGTCTGTGTGGCCTaGTGCCACAGACACATCAATCCGGCTGTCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: QDTAQPTSVCVA*CHRHINPAVHD Trigger: GTCATGGACAGCCGGATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGGGCTGGGCAGTGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | TCTCATCGCCTGGCTTCACTAGGTCTCTCAGGACACTaGCCAGCCCACTTCGGTCTGTGTGGCCTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHRLASLGLSGH*PAHFGLCGLLP Trigger: TGGCAGCAGGCCACACAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGACCTAGTGAAGCCAGGCGATGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS CCA 72 bp | TCTCTCAGGACACTGCCCAGCCCACTTCGGTCTGTGTaGCCTGCTGCCACAGACACATCAATCCGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRTLPSPLRSV*PAATDTSIRLS Trigger: GGACAGCCGGATTGATGTGTCTGTGGCAGCAGGCCACACAGACCGAAGTGGGCTGGGCAGTGTCCTGAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS TCA 72 bp | TCCTCCTGGGCCTGCTGGAGCTGTTCCCGAACATTCTaGAGCTCTTCATCCTTGCCCTTCAGCTCAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSWACWSCSRTF*SSSSLPFSSAA Trigger: CGCCGCTGAGCTGAAGGGCAAGGATGAAGAGCTTCAGAATGTTCGGGAACAGCTCCAGCAGGCCCAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | TCGTGCCGTAACCGGACGGCCCCCAGTTCTTCTTTGTaGTGGGACTTCTCCTGCAGCGTCTCCATGGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCRNRTAPSSSL*WDFSCSVSMAS Trigger: ACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 72 bp | AGGCCTGTGCGGCTCTTGCTGTTGGTAAGGATCTCCTaGAGCCGTTCCTGCAGCTTATCAGCCCGTTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPVRLLLLVRIS*SRSCSLSARFR Trigger: GCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCACAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS CCA 72 bp | GAGGGGGCTGGGCCTGAGGACTGCTGGATAGAGACCTaGCTGGGATGGCTGAACTCTCCTTCTCCTTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGAGPEDCWIET*LGWLNSPSPSR Trigger: TCTTGAAGGAGAAGGAGAGTTCAGCCATCCCAGCCAGGTCTCTATCCAGCAGTCCTCAGGCCCAGCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS CAA 72 bp | TTCTCGTGCCGTAACCGGACGGCCCCCAGTTCTTCTTaGTGCTGGGACTTCTCCTGCAGCGTCTCCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FSCRNRTAPSSS*CWDFSCSVSMA Trigger: AGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CAA 72 bp | TCAGACAGAACCAGCTCCTCGAGGCCTGTGCGGCTCTaGCTGTTGGTAAGGATCTCCTGCAGCCGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SDRTSSSRPVRL*LLVRISCSRSC Trigger: GCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCACAGGCCTCGAGGAGCTGGTTCTGTCTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS CAA 90 bp | CCCGTCCACATGTGCTCCAGCTGCTCCAGGAACGCCTTCCTTGAGTaGTCGGTTTTCCAGCTCCAGCTGCTCCAGCTGGCTGCAAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVHMCSSCSRNAFLE*SVFQLQLLQLAAKL Trigger: AAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTGGACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CAA 90 bp | AGCAGCTCCTTCTCGTGCCGTAACCGGACGGCCCCCAGTTCTTCTTaGTGCTGGGACTTCTCCTGCAGCGTCTCCATGGCTAGTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSCRNRTAPSSS*CWDFSCSVSMASSS Trigger: GGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGTCCGGTTACGGCACGAGAAGGAGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CAA 90 bp | TCATCCTTGCCCTTCAGCTCAGCGGCGTGCTCCTCCCGGCACAGCTaGAGGGTTTCCTCTTGTTCCTGTTGCTGCTGCTGCAAAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLPFSSAACSSRHS*RVSSCSCCCCCKDS Trigger: GGAATCTTTGCAGCAGCAGCAACAGGAACAAGAGGAAACCCTCAAGCTGTGCCGGGAGGAGCACGCCGCTGAGCTGAAGGGCAAGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS TCA 72 bp | CCACATGTGCTCCAGCTGCTCCAGGAACGCCTTCCTTaGGTTGTCGGTTTTCCAGCTCCAGCTGCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PHVLQLLQERLP*VVGFPAPAAPA Trigger: AGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 72 bp | ACGCCTTCCTTGAGTTGTCGGTTTTCCAGCTCCAGCTaGTCCAGCTGGCTGCAAAGCTTGCTGAACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPSLSCRFSSSS*SSWLQSLLNSA Trigger: GGCCGAGTTCAGCAAGCTTTGCAGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | TCTAATTCCCTTGTTCGAGCCTTCTCCTCACGAATCTaGCCCCGGAGCTCCTCCTCCTGCCGCTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSLVRAFSSRI*PRSSSSCRFLS Trigger: GGACAAGAAGCGGCAGGAGGAGGAGCTCCGGGGGCAGATTCGTGAGGAGAAGGCTCGAACAAGGGAATTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CAA 72 bp | ATGTGCTCCAGCTGCTCCAGGAACGCCTTCCTTGAGTaGTCGGTTTTCCAGCTCCAGCTGCTCCAGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MCSSCSRNAFLE*SVFQLQLLQLA Trigger: AGCCAGCTGGAGCAGCTGGAGCTGGAAAACCGACAACTCAAGGAAGGCGTTCCTGGAGCAGCTGGAGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS CAA 72 bp | AGAACCAGCTCCTCGAGGCCTGTGCGGCTCTTGCTGTaGGTAAGGATCTCCTGCAGCCGTTCCTGCAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTSSSRPVRLLL*VRISCSRSCSL Trigger: TAAGCTGCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAGCCGCACAGGCCTCGAGGAGCTGGTTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | ACGGCCCCCAGTTCTTCTTTGTGCTGGGACTTCTCCTaGAGCGTCTCCATGGCTAGTTCATCCAGCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: TAPSSSLCWDFS*SVSMASSSSMT Trigger: GGTCATGCTGGATGAACTAGCCATGGAGACGCTGCAGGAGAAGTCCCAGCACAAAGAAGAACTGGGGGCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS GCA 72 bp | TTGAGCACAGCGCTGCCTTTCTTCTCCAGGATGCGCTaGCCGTCTACTGTGTCCTTTACCTCCTGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTALPFFSRMR*PSTVSFTSCFR Trigger: CCTGAAGCAGGAGGTAAAGGACACAGTAGACGGGCAGCGCATCCTGGAGAAGAAAGGCAGCGCTGTGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | CGTTCCTGCAGCTTATCAGCCCGTTTCCGCTCCAAGTaGAGCTGCCGCTTAAGATCTTTGAGCACAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSLSARFRSK*SCRLRSLSTAL Trigger: CAGCGCTGTGCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | CTCTTGCTGTTGGTAAGGATCTCCTGCAGCCGTTCCTaGAGCTTATCAGCCCGTTTCCGCTCCAAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLVRISCSRS*SLSARFRSKCS Trigger: GCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCAGGAACGGCTGCAGGAGATCCTTACCAACAGCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CCA 72 bp | CCTCAGCTTCCTTCAAGCGCCGTTCAAACCAGCCCTTaGCTCCATCCATGGAGTGTACCTGAGCCTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PQLPSSAVQTSP*LHPWSVPEPGV Trigger: AACTCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGAAGGAAGCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 72 bp | AGGATGCGCTGCCCGTCTACTGTGTCCTTTACCTCCTaGTTCAGGTTGCTGATGGTCTTCACGTGGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: RMRCPSTVSFTS*FRLLMVFTWPS Trigger: AGATGGCCACGTGAAGACCATCAGCAACCTGAAGCAGGAGGTAAAGGACACAGTAGACGGGCAGCGCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | TGCAGCTTATCAGCCCGTTTCCGCTCCAAGTGCAGCTaGCGCTTAAGATCTTTGAGCACAGCGCTGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSLSARFRSKCS*RLRSLSTALPF Trigger: GAAAGGCAGCGCTGTGCTCAAAGATCTTAAGCGGCAGCTGCACTTGGAGCGGAAACGGGCTGATAAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | AGGAGGAGACACTACTGCTGTCCCCTGTCTGGGTCCTaGTTGGTGAGTTCATCTCAGACAGAACCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRHYCCPLSGS*LVSSSQTEPAP Trigger: AGGAGCTGGTTCTGTCTGAGATGAACTCACCAAGCAGGACCCAGACAGGGGACAGCAGTAGTGTCTCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS CCA 72 bp | TCAAGCGCCGTTCAAACCAGCCCTTGGCTCCATCCATaGAGTGTACCTGAGCCTGGAGTTCTTCCACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSAVQTSPWLHP*SVPEPGVLPLC Trigger: ACACAGTGGAAGAACTCCAGGCTCAGGTACACTCCATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS TCA 72 bp | CTAGGTCTGGGTCAGGGGACCCCACACATTCCTTGCTaGGCCGCACAATTTCCTGGGATAGAACTTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LGLGQGTPHIPC*AAQFPGIELPC Trigger: ACATGGAAGTTCTATCCCAGGAAATTGTGCGGCTCAGCAAGGAATGTGTGGGGTCCCCTGACCCAGACCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | CTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTaGCTGCAGCATCTCATTTTCACTCAGCAGTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQTEVLLLAVQL*LQHLIFTQQYL Trigger: GAGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | AAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTTGCCTaGAGCATCTCATTTTCACTCAGCAGTACCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KRKSSSWLCSFA*SISFSLSSTST Trigger: AGTGGAGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS GCA 72 bp | GTACTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTaGAGCTTTGCCTGCAGCATCTCATTTTCACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLFCKRKSSSWL*SFACSISFSLS Trigger: GCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS CAA 72 bp | TCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTTCACTCAGCAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: SANGSPPPGCAA*PAASHFHSAVP Trigger: AGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
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| CDS CAA 90 bp | GTGTACTGTTCTGCAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTaGCCTGCAGCATCTCATTTTCACTCAGCAGTACCTCCACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VYCSANGSPPPGCAA*PAASHFHSAVPPLP Trigger: AGGAAGTGGAGGTACTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS TCA 72 bp | GCTGCTCCAGCTGGCTGCAAAGCTTTTGAGCTTTACTaGACTCCTTATCCAGGTAGGCGACCTTCTGTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAPAGCKAFELY*TPYPGRRPSVE Trigger: TTCGACAGAAGGTCGCCTACCTGGATAAGGAGTTCAGTAAAGCTCAAAAGCTTTGCAGCCAGCTGGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101694.10 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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| CDS GCA 72 bp | CAAAGCTTGCTGAACTCGGCCATAAGTGTACTGTTCTaGAAACGGAAGTCCTCCTCCTGGCTGTGCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QSLLNSAISVLF*KRKSSSWLCSF Trigger: AAAGCTGCACAGCCAGGAGGAGGACTTCCGTTTGCAGAACAGTACACTTATGGCCGAGTTCAGCAAGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065932.14 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | TTAGCAAGTTCCTCCTGTAGTCTGGAGGTTTCAGCTTaGTTTGAGCTCTCTAAGCCTTGTAGCTGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LASSSCSLEVSA*FELSKPCSCSQ Trigger: CTGGGAGCAGCTACAAGGCTTAGAGAGCTCAAAGCAAGCTGAAACCTCCAGACTACAGGAGGAACTTGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 |
||
| CDS CCA 72 bp | TCAAGTTCCTGCTGTAGTTTTTGGGTGCGAGCCAACTaGGCTTTCAGATCAGCTTCCTTCCGCTGTTGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCCSFWVRAN*AFRSASFRCCN Trigger: ATTGCAACAGCGGAAGGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCAAAAACTACAGCAGGAACTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 72 bp | CATTCTTCCGAAGTTCATCCGAAAGCTGGTAGTTATTaGTCCGGAGCTCCAGGAGCTGAGTCTGCATCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSSEVHPKAGSY*SGAPGAESASV Trigger: AACGGATGCAGACTCAGCTCCTGGAGCTCCGGACAAATAACTACCAGCTTTCGGATGAACTTCGGAAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 72 bp | TGGTCTGTTCCCGAAGCATATTCAGTTCTTGTGTCTTaGCTGTCTGGATCTGATCTTGTAGGGCCCGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: WSVPEAYSVLVS*LSGSDLVGPAT Trigger: CGTTGCGGGCCCTACAAGATCAGATCCAGACAGCAAAGACACAAGAACTGAATATGCTTCGGGAACAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 72 bp | CGGCTATTGGCCCTTAACGACTCCTGGAGCTGCGAGTaGAGGTCATCTTTCTGTCCCATAAGCTCTTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: RLLALNDSWSCE*RSSFCPISSSY Trigger: ATATGAAGAGCTTATGGGACAGAAAGATGACCTCAACTCGCAGCTCCAGGAGTCGTTAAGGGCCAATAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 90 bp | GTTCAACACCATTCTTCCGAAGTTCATCCGAAAGCTGGTAGTTATTaGTCCGGAGCTCCAGGAGCTGAGTCTGCATCCGTTGAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VQHHSSEVHPKAGSY*SGAPGAESASVETP Trigger: AGGAGTTTCAACGGATGCAGACTCAGCTCCTGGAGCTCCGGACAAATAACTACCAGCTTTCGGATGAACTTCGGAAGAATGGTGTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 90 bp | CTCAGATGCCAATTCACTGGTCTGTTCCCGAAGCATATTCAGTTCTaGTGTCTTTGCTGTCTGGATCTGCTCCAGAGCAGCCAAGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRCQFTGLFPKHIQF*CLCCLDLLQSSQAS Trigger: ACTAGCTTGGCTGCTCTGGAGCAGATCCAGACAGCAAAGACACAAGAACTGAATATGCTTCGGGAACAGACCAGTGAATTGGCATCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CCA 72 bp | ACTCCTTATCCAGGTAGGCGACCTTCTGTCGAAGACTaGAAAGTTCAACACCATTCTTCCGAAGTTCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPYPGRRPSVED*KVQHHSSEVHP Trigger: CGGATGAACTTCGGAAGAATGGTGTTGAACTTTCCAGTCTTCGACAGAAGGTCGCCTACCTGGATAAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS CAA 90 bp | TGCATGTTCTTGGTGAGTTGCTCCTCCAACATGTTCTGCAGCTTCTaGTTCATTTCTCGAAGGTTCTCATCGCCTGGCTTCACTAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CMFLVSCSSNMFCSF*FISRRFSSPGFTRS Trigger: AGACCTAGTGAAGCCAGGCGATGAGAACCTTCGAGAAATGAACAAGAAGCTGCAGAACATGTTGGAGGAGCAACTCACCAAGAACATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS GCA 72 bp | TCCATGTCCTTGTGCAAGTGCATGTTCTTGGTGAGTTaGTCCTCCAACATGTTCTGCAGCTTCTTGTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SMSLCKCMFLVS*SSNMFCSFLFI Trigger: AATGAACAAGAAGCTGCAGAACATGTTGGAGGAGCAACTCACCAAGAACATGCACTTGCACAAGGACATGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 |
||
| CDS CAA 90 bp | TTGGGTGCGAGCCAACTGGGCTTTCAGATCAGCTTCCTTCCGCTGTaGCAATTCTTCAATTTTGTTTCTGCTGTCATTAAACAGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGASQLGFQISFLPL*QFFNFVSAVIKQCF Trigger: GAAACACTGTTTAATGACAGCAGAAACAAAATTGAAGAATTGCAACAGCGGAAGGAAGCTGATCTGAAAGCCCAGTTGGCTCGCACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
||
| CDS TCA 72 bp | TCATCTTTCTGTCCCATAAGCTCTTCATATTCAGCTTaGCGATGCTGTAACTCAGATGCCAATTCACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSFCPISSSYSA*RCCNSDANSLV Trigger: GACCAGTGAATTGGCATCTGAGTTACAGCATCGTCAAGCTGAATATGAAGAGCTTATGGGACAGAAAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065932.14 ENSMUST00000101694.10 ENSMUST00000115675.9 ENSMUST00000136930.8 ENSMUST00000140540.2 |
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