Pregenerated sensors for GRIN3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035745Ensembl transcript IDs: ENSMUST00000045085.8, ENSMUST00000131816.3, ENSMUST00000149148.8
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTCACCACGCCGGGCGGTaGCAGAACCTGGCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRHHAGR*QNLAQT Trigger: GGTCTGTGCCAGGTTCTGGCACCGCCCGGCGTGGTG...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGGTCACGGCCATGTGTaGCCGACCGGCCAGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRGHGHV*PTGQQV Trigger: GACCTGCTGGCCGGTCGGGCACACATGGCCGTGACC...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTGCCATCCCCAAGCTaGGCCCGCAGTTCCCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRVPSPS*ARSSPR Trigger: GCGAGGGGAACTGCGGGCCCAGCTTGGGGATGGCAC...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCCAGCTGCCTACTGTTaGCCAGGCTGGGGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGPAAYC*PGWGTQ Trigger: CTGGGTGCCCCAGCCTGGGCAACAGTAGGCAGCTGG...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCTACTGTTGCCCAGGCTaGGGCACCCAGCGGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGYCCPG*GTQRVP Trigger: AGGGACCCGCTGGGTGCCCCAGCCTGGGCAACAGTA...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTTGTAGGCCTCCGCGCTaGTCTCCCACACGGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRCRPPR*SPTRCQ Trigger: TTGGCACCGTGTGGGAGAGCAGCGCGGAGGCCTACA...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTCGACGCATGTGTGCGTaGATCTCGGGGAAGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRRRMCA*ISGKLA Trigger: GGCGAGCTTCCCCGAGATGCACGCACACATGCGTCG...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGTTCAGTCCAGCTGCAGGTaGAACGGGGTCGGAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RVVFVYRINCRGQCGRVVQSSCR*NGVGAP Trigger: CGGAGCTCCGACCCCGTTCCACCTGCAGCTGGACTG...AACTACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | TACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGAGAGCAGCCGCCCCTaGCTGGAAGTCCAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: YRVVFVYRINCRGQCGRVESSRP*LEVQLS Trigger: GGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTC...TACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTGGTAGGTGCGCTGTaGCGACGCATGTGTGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRVVGAL*RRMCAC Trigger: GCACGCACACATGCGTCGCCACAGCGCACCTACCAC...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | TACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGCACCCCGGGCCCATTaGAGCAGAGCCACGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: YRVVFVYRINCRGQCGRVAPRAH*SRATDG Trigger: ACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGC...TACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGGCGCCAGGGCCAGGCTaGGCCACAGCGTCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LIAVYRVVFVYRINCRGQAPGPG*ATASAH Trigger: GTGTGCAGACGCTGTGGCTCAGCCTGGCCCTGGCGC...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGCCCCTGTGCGGCCCTaGAATGAGGTGTTGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRAPVRP*NEVLLR Trigger: TCTGAGCAACACCTCATTTCAGGGCCGCACAGGGGC...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTACGGTTGCGGCCGCGTaGCGTGAGCCCGTAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCTVAAA*REPVGT Trigger: AGTCCCTACGGGCTCACGCCACGCGGCCGCAACCGT...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCTGACAGGTTGGAGGTaGGCGGCGAATTTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGLTGWR*AANFGA Trigger: TGCCCCAAAATTCGCCGCTCACCTCCAACCTGTCAG...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCGCAGCTGCCAGGAACTaGAATAGCCGTAGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGAAARN*NSRSSG Trigger: GCCTGAGCTACGGCTATTGCAGTTCCTGGCAGCTGC...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATACCCCGCACCGTCGGCTaGAGGTTGCTCCTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRIPRTVG*RLLLLG Trigger: CCCAAGGAGGAGCAACCTGCAGCCGACGGTGCGGGG...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATACTCGCGTGCGCACCATaGTGCCCAGGCTGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRILACAP*CPGWWR Trigger: TCTCCACCAGCCTGGGCATCATGGTGCGCACGCGAG...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | TACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTATGGCGTAGCAGAGGTTaGGAGCGGAGGAGTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YRVVFVYRINCRGQCGRVWRSRG*ERRSRR Trigger: TCTCCTACTCCTCCGCTCTCAACCTCTGCTACGCCA...TACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGGGGAAGCTCGCCTTaGTGTAGGCCTCCGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCRGSSP*CRPPRC Trigger: GCAGCGCGGAGGCCTACATCAAGGCGAGCTTCCCCG...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTCTAGCCCAGTCCAGCTaGAGGTGGAACGGGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCLAQSS*RWNGVG Trigger: TCCGACCCCGTTCCACCTGCAGCTGGACTGGGCTAG...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCTGGCCGAGTCATTGGTaGCTGGGTCTAGACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGWPSHW*LGLDTA Trigger: AGCTGTGTCTAGACCCAGGCACCAATGACTCGGCCA...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCAGCATCTTCTCAGGGTaGGAGGCACGGAGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGSIFSG*EARSHS Trigger: AGAATGGCTCCGTGCCTCGCACCCTGAGAAGATGCT...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGCTGCACTCCTGCTCTaGCCTCTCCTGTTGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCAALLL*PLLLPL Trigger: GAGGGGCAACAGGAGAGGGCAGAGCAGGAGTGCAGC...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCGTCCAGCACAAACTTTaGAGCCTGGCTAGCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: AVYRVVFVYRINCRGQCGVQHKL*SLASTA Trigger: AGCCGTGCTAGCCAGGCTCCAAAGTTTGTGCTGGAC...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTTCCAGACTCAGGTTGTaGGGCAGCCGCGGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCSRLRL*GSRGEG Trigger: CCCTTCCCCGCGGCTGCCGCACAACCTGAGTCTGGA...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAGGCCATGCTGCTGAGTaGCCGAGCCACAAGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRIGHAAE*PSHKLH Trigger: GTGGAGCTTGTGGCTCGGGCACTCAGCAGCATGGCC...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACAGGGCCCGCTCTGGGTaGATGAGGGCCATGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINRARSG*MRAMLL Trigger: CAGCAGCATGGCCCTCATGCACCCAGAGCGGGCCCT...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGTCCATCCTGCCAGCTaGCTACTGTTGCCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCVHPAS*LLLPRL Trigger: CAGCCTGGGCAACAGTAGGCAGCTGGCAGGATGGAC...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTTGCTCTCCCACACGGTaGCAAAGCGGAAGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCCSPTR*QSGSLG Trigger: CCCAAGGCTTCCGCTTTGGCACCGTGTGGGAGAGCA...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACGGGCCGCTGCACTCCTaGTCTGCCCTCTCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINGPLHS*SALSCC Trigger: GCAACAGGAGAGGGCAGAGCAGGAGTGCAGCGGCCC...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACCCTCCTTGGGGCCGCTaGACTCCTGCTCTGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINPPWGR*TPALPS Trigger: AGAGGGCAGAGCAGGAGTGCAGCGGCCCCAAGGAGG...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | AGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGTTTTCCCGCTGTCCAACTaGCTCAGGTCCAGCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: RVVFVYRINCRGQCGRVVFPLSN*LRSSTN Trigger: GTTTGTGCTGGACCTGAGCCAGTTGGACAGCGGGAA...AACTACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTGCAGCCGCCCCTGGCTaGAAGTCCAGCTGTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCAAAPG*KSSCPS Trigger: GGATGGACAGCTGGACTTCCAGCCAGGGGCGGCTGC...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | ATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCTGGGTGCCAGATaGAGATGGAACTCGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: IAVYRVVFVYRINCRGQCGLGAR*RWNSES Trigger: GCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCC...ACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATACTCCTGTTGCCCCTCTaGTGGCCCTGTGTTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRILLLPL*WPCVEG Trigger: GCCCTCAACACAGGGCCACCAGAGGGGCAACAGGAG...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGCCCACACAGCCCCTGTaGGGCCCTGAAATGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LIAVYRVVFVYRINCRGQPTQPL*GPEMRC Trigger: ACACCTCATTTCAGGGCCGCACAGGGGCTGTGTGGG...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAACACACCCACCCACATaGACCAGTGCAGGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRITHPPT*TSAGAT Trigger: TGTGGCCCCTGCACTGGTCCATGTGGGTGGGTGTGT...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCTGTTGCCCCTCTGGTaGCCCTGTGTTGAGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCLLPLW*PCVEGS Trigger: CGAGCCCTCAACACAGGGCCACCAGAGGGGCAACAG...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACCAGGTTGCTCCTCCTTaGGGCCGCTGCACTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINQVAPP*GRCTPA Trigger: AGCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTG...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTAGTGCAGGGGCCACATaGAAGCCCCAATGGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRSAGAT*KPQWVR Trigger: CCTCACCCATTGGGGCTTTCATGTGGCCCCTGCACT...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTAGGGTTTGCCCACGGTaGGCAGCTTGCAGTCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRRVCPR*AACSPH Trigger: ATGCGGACTGCAAGCTGCTCACCGTGGGCAAACCCT...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATATCCAGCTGTCCATCCTaGCAGCTGCCTACTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRISSCPS*QLPTVA Trigger: GGCAACAGTAGGCAGCTGGCAGGATGGACAGCTGGA...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTTTGGCCGGGCCTGGGTaGCAGATGGAGATGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCLAGPG*QMEMEL Trigger: GAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAA...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGCCCAGCCGGGCACTaGCCATCTTCATCAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: LIAVYRVVFVYRINCRGQCPAGH*PSSSDS Trigger: GGAATCTGATGAAGATGGGCAGTGCCCGGCTGGGCA...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | AGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGTTGCTCCAGCAGGTCAATaGAGTAGCCATAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVVFVYRINCRGQCGRVVAPAGQ*SSHNSI Trigger: GATGCTGTTATGGCTACTGCATTGACCTGCTGGAGC...AACTACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTGTGGCGACGCATGTGTaGGTGCATCTCGGGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCVATHV*VHLGEA Trigger: AGCTTCCCCGAGATGCACGCACACATGCGTCGCCAC...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTAGGACCTCATGTGCATaGGCAGTGCTGCAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRYLIAVYRVVFVYRINCRTSCA*AVLQPR Trigger: CCTGGGCTGCAGCACTGCCCATGCACATGAGGTCCT...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGTGCCAGATGGAGATaGAACTCGGAGAGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRGARWR*NSESSR Trigger: GCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACC...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTCCTGGTGAACACAAATaGGTGTTCCACCAGAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VYRVVFVYRINCRGQCGRPGEHK*VFHQSY Trigger: GTAACTCTGGTGGAACACCCATTTGTGTTCACCAGG...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | TACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAAAGGGTGGTGCAGCTTaGGATCATGGATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YRVVFVYRINCRGQCGRVKGGAA*DHGFQT Trigger: TGTCTGGAATCCATGATCCCAAGCTGCACCACCCTT...TACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | TACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTACATCAGATTCCCTGGTaGACACAAATGGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRVVFVYRINCRGQCGRVHQIPW*TQMGVP Trigger: TGGAACACCCATTTGTGTTCACCAGGGAATCTGATG...TACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGCCTACTGATGAACTCTaGCAGGTTGGAGGTGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIAVYRVVFVYRINCRGQPTDEL*QVGGER Trigger: CCGCTCACCTCCAACCTGTCAGAGTTCATCAGTAGG...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATACCCGACCATGACAGCTaGCAGGTTGGCTGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRIPDHDS*QVGCVT Trigger: AGTTACACAGCCAACCTGGCAGCTGTCATGGTCGGG...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACAGCTCCACCATGTCGTaGACGGCAGCTTCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINSSTMS*TAASRE Trigger: TTCCCTGGAAGCTGCCGTCCACGACATGGTGGAGCT...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATACAGGACAAACAACCCTaGCAAGTGGTAGACCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVPRYLIAVYRVVFVYRIQDKQP*QVVDPH Trigger: ATGGGGGTCTACCACTTGTCAGGGTTGTTTGTCCTG...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTAATACTGCAGCTTATTaGCCCTGCGGATGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRNTAAY*PCGCAA Trigger: TGCCGCGCATCCGCAGGGGCAATAAGCTGCAGTATT...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGTTGGCTGTGTAACTaGATAGCACCAGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRGWLCN*IAPAGR Trigger: TCTGCCTGCTGGTGCTATCCAGTTACACAGCCAACC...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR TCA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTCATGGAGCAGATCAATaGAGCCTGAGGACTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RYLIAVYRVVFVYRINCRHGADQ*SLRTCT Trigger: GGTACAAGTCCTCAGGCTTCATTGATCTGCTCCATG...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR GCA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACCAGCAGGCAGAAGATTaGCCAGAGATTCATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPRYLIAVYRVVFVYRINQQAED*PEIHEE Trigger: TTCCTCATGAATCTCTGGGCAATCTTCTGCCTGCTG...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CCA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGCAGTCCGCATCTATaGACACCTCATAATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIAVYRVVFVYRINCRGQCSPHL*TPHNPV Trigger: TACTGGATTATGAGGTGTCCATAGATGCGGACTGCA...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 90 bp | CACCACGGCCCGGCGCACCCGCCTCCAGCGCCCCGCACCGTCGGCTaGAGGTTGCTCCTCCTTGGGGCCGCTGCACTCCTGCTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHGPAHPPPAPRTVG*RLLLLGAAALLLCP Trigger: AGGGCAGAGCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGCAGCCGACGGTGCGGGGCGCTGGAGGCGGGTGCGCCGGGCCGTGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS CCA 90 bp | GCATGCAGCAGGCGCAGTGGCCTGAGCCGGGTGCCATCCCCAAGCTaGGCCCGCAGTTCCCCTCGCCGCAGCAGCGCACTACGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACSRRSGLSRVPSPS*ARSSPRRSSALRSR Trigger: GCGGCTGCGTAGTGCGCTGCTGCGGCGAGGGGAACTGCGGGCCCAGCTTGGGGATGGCACCCGGCTCAGGCCACTGCGCCTGCTGCATGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 90 bp | AGGCCGCGCCTCGGGAAAGGTTATAGAGGCCACCACGCCGGGCGGTaGCAGAACCTGGCACAGACCTCGGGCCAGCGACGCGGGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: RPRLGKGYRGHHAGR*QNLAQTSGQRRGVP Trigger: CGGGACCCCGCGTCGCTGGCCCGAGGTCTGTGCCAGGTTCTGGCACCGCCCGGCGTGGTGGCCTCTATAACCTTTCCCGAGGCGCGGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS CCA 90 bp | TGTAGTTCCTCAGCTCTCGGCGGGCGCCGCATGCAGCAGGCGCAGTaGCCTGAGCCGGGTGCCATCCCCAAGCTGGGCCCGCAGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSSALGGRRMQQAQ*PEPGAIPKLGPQFP Trigger: GGGGAACTGCGGGCCCAGCTTGGGGATGGCACCCGGCTCAGGCCACTGCGCCTGCTGCATGCGGCGCCCGCCGAGAGCTGAGGAACTACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131816.3 |
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| CDS GCA 90 bp | CCGCTCCCGTGCAGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTaGTTGCACCCCGGGCCCATTGGAGCAGAGCCACGGATGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPCSLNAQLQLPQF*LHPGPIGAEPRMVP Trigger: GGGGACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGCTGCACGGGAGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 90 bp | GGGCGGGTCGCTCGTGAGCATGGCCACTCCGTGTGGAGTGGTAGGTaGGCTGTGGCGACGCATGTGTGCGTGCATCTCGGGGAAGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: GRVAREHGHSVWSGR*AVATHVCVHLGEAR Trigger: GCGAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCCATGCTCACGAGCGACCCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | TCCCGTGCAGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTGCTTaGACCCCGGGCCCATTGGAGCAGAGCCACGGATGGTCCCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SRAASMRSSSSRSSA*TPGPLEQSHGWSPP Trigger: TGGCGGGGACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGCTGCACGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 90 bp | CTGGGAGCGAGCCGAGTTGATACTGAAGCTGGTCACGGCCATGTGTaGCCGACCGGCCAGCAGGTCACCCACCAGGCCTGTCCAGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: LGASRVDTEAGHGHV*PTGQQVTHQACPAS Trigger: GGACGCTGGACAGGCCTGGTGGGTGACCTGCTGGCCGGTCGGGCACACATGGCCGTGACCAGCTTCAGTATCAACTCGGCTCGCTCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | AGGGCCATGCTGCTGAGTGCCCGAGCCACAAGCTCCACCATGTCGTaGACGGCAGCTTCCAGGGAAGGCTGCCCGGTTTCCCCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: RAMLLSARATSSTMS*TAASREGCPVSPST Trigger: GGTGCTGGGGGAAACCGGGCAGCCTTCCCTGGAAGCTGCCGTCCACGACATGGTGGAGCTTGTGGCTCGGGCACTCAGCAGCATGGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS TCA 90 bp | CGCTGTGGCGACGCATGTGTGCGTGCATCTCGGGGAAGCTCGCCTTaGTGTAGGCCTCCGCGCTGCTCTCCCACACGGTGCCAAAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: RCGDACVRASRGSSP*CRPPRCSPTRCQSG Trigger: TCCGCTTTGGCACCGTGTGGGAGAGCAGCGCGGAGGCCTACATCAAGGCGAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | GGCCACTCCGTGTGGAGTGGTAGGTGCGCTGTGGCGACGCATGTGTaGGTGCATCTCGGGGAAGCTCGCCTTGATGTAGGCCTCCGCGCT | + |
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Preference number: 5 (lower is better) Translates to: GHSVWSGRCAVATHV*VHLGEARLDVGLRA Trigger: AGCGCGGAGGCCTACATCAAGGCGAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | GGCCTGGGTGCCAGATGGAGATGGAACTCGGAGAGCAGCCGCCCCTaGCTGGAAGTCCAGCTGTCCATCCTGCCAGCTGCCTACTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: GLGARWRWNSESSRP*LEVQLSILPAAYCC Trigger: GCAACAGTAGGCAGCTGGCAGGATGGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | AGTTACCACTCGCAGCTTTGGCCGGGCCTGGGTGCCAGATGGAGATaGAACTCGGAGAGCAGCCGCCCCTGGCTGGAAGTCCAGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SYHSQLWPGLGARWR*NSESSRPWLEVQLS Trigger: GGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGAGTGGTAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS TCA 90 bp | CCCAGGCTGGGGCACCCAGCGGGTCCCTGCGTAAGCTCCATACCTTaGAATGCCGAGACACATGCACCTGAGAGGAGCCTGCCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRLGHPAGPCVSSIP*NAETHAPERSLPPT Trigger: TGTGGGTGGCAGGCTCCTCTCAGGTGCATGTGTCTCGGCATTTCAAGGTATGGAGCTTACGCAGGGACCCGCTGGGTGCCCCAGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS CCA 90 bp | TGGGTGCCAGATGGAGATGGAACTCGGAGAGCAGCCGCCCCTGGCTaGAAGTCCAGCTGTCCATCCTGCCAGCTGCCTACTGTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVPDGDGTRRAAAPG*KSSCPSCQLPTVAQ Trigger: CTGGGCAACAGTAGGCAGCTGGCAGGATGGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | AATGGGTGTTCCACCAGAGTTACCACTCGCAGCTTTGGCCGGGCCTaGGTGCCAGATGGAGATGGAACTCGGAGAGCAGCCGCCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NGCSTRVTTRSFGRA*VPDGDGTRRAAAPG Trigger: GCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGAGTGGTAACTCTGGTGGAACACCCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | TCGCTCGTGAGCATGGCCACTCCGTGTGGAGTGGTAGGTGCGCTGTaGCGACGCATGTGTGCGTGCATCTCGGGGAAGCTCGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLVSMATPCGVVGAL*RRMCACISGKLALM Trigger: CATCAAGGCGAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCCATGCTCACGAGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | CGTAGGACGCTCAGCACCGGGGTCTCTGTGGCAGCTGCCAGGAACTaGAATAGCCGTAGCTCAGGCCGCGCCTCGGGAAAGGTTATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRTLSTGVSVAAARN*NSRSSGRASGKVIE Trigger: CTCTATAACCTTTCCCGAGGCGCGGCCTGAGCTACGGCTATTGCAGTTCCTGGCAGCTGCCACAGAGACCCCGGTGCTGAGCGTCCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS CCA 90 bp | GAGAGCGGAGGAGTAGGAGAAGACGGTACCACGGTTGCGGCCGCGTaGCGTGAGCCCGTAGGGACTCCGCCATTCGTACAGAGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ESGGVGEDGTTVAAA*REPVGTPPFVQSKE Trigger: TTCCTTACTCTGTACGAATGGCGGAGTCCCTACGGGCTCACGCCACGCGGCCGCAACCGTGGTACCGTCTTCTCCTACTCCTCCGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS TCA 90 bp | GAGAAGTGCACTGCCCAGCCCGAGGCACAGCAGGACAAACAACCCTaGCAAGTGGTAGACCCCCATCTGCAGCGTCTCCGTCACGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: EKCTAQPEAQQDKQP*QVVDPHLQRLRHGE Trigger: TTCGCCGTGACGGAGACGCTGCAGATGGGGGTCTACCACTTGTCAGGGTTGTTTGTCCTGCTGTGCCTCGGGCTGGGCAGTGCACTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | CAAAGTCAAAGGCCAGGTCCTCGGCCAGCCGCTCCAGCAGGTCAATaGAGTAGCCATAACAGCATCTTCTCAGGGTGCGAGGCACGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSQRPGPRPAAPAGQ*SSHNSIFSGCEARS Trigger: GCTCCGTGCCTCGCACCCTGAGAAGATGCTGTTATGGCTACTGCATTGACCTGCTGGAGCGGCTGGCCGAGGACCTGGCCTTTGACTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | CACCCACCAGGCCTGTCCAGCGTCCATCACGCAGGGCCCCGTACTTaGCATCCCCCACAATATAGAGCTCAAAGTCAAAGGCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPGLSSVHHAGPRT*HPPQYRAQSQRPGP Trigger: AGGACCTGGCCTTTGACTTTGAGCTCTATATTGTGGGGGATGGCAAGTACGGGGCCCTGCGTGATGGACGCTGGACAGGCCTGGTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | GGATCTTCTGGCTCGTGTGAAGCCAATACTGCAGCTTATTGCCCCTaGGGATGCGCGGCAGCACCAGGCGGTAGAAGACGTGCTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSGSCEANTAAYCP*GCAAAPGGRRRAHP Trigger: TGGGTGAGCACGTCTTCTACCGCCTGGTGCTGCCGCGCATCCGCAGGGGCAATAAGCTGCAGTATTGGCTTCACACGAGCCAGAAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 90 bp | CTCGGTGGATCTTCTGGCTCGTGTGAAGCCAATACTGCAGCTTATTaGCCCTGCGGATGCGCGGCAGCACCAGGCGGTAGAAGACGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGSSGSCEANTAAY*PCGCAAAPGGRRRA Trigger: AGCACGTCTTCTACCGCCTGGTGCTGCCGCGCATCCGCAGGGGCAATAAGCTGCAGTATTGGCTTCACACGAGCCAGAAGATCCACCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS TCA 90 bp | TCTTACTGGAGACAGTGCGTCCGAAGAGAATGGCGTAGCAGAGGTTaGGAGCGGAGGAGTAGGAGAAGACGGTACCACGGTTGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SYWRQCVRREWRSRG*ERRSRRRRYHGCGR Trigger: GCGGCCGCAACCGTGGTACCGTCTTCTCCTACTCCTCCGCTCTCAACCTCTGCTACGCCATTCTCTTCGGACGCACTGTCTCCAGTAAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | GGTGAACACAAATGGGTGTTCCACCAGAGTTACCACTCGCAGCTTTaGCCGGGCCTGGGTGCCAGATGGAGATGGAACTCGGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEHKWVFHQSYHSQL*PGLGARWRWNSESS Trigger: GCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGAGTGGTAACTCTGGTGGAACACCCATTTGTGTTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 90 bp | AGCCGGGCACTGCCCATCTTCATCAGATTCCCTGGTGAACACAAATaGGTGTTCCACCAGAGTTACCACTCGCAGCTTTGGCCGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRALPIFIRFPGEHK*VFHQSYHSQLWPGL Trigger: CAGGCCCGGCCAAAGCTGCGAGTGGTAACTCTGGTGGAACACCCATTTGTGTTCACCAGGGAATCTGATGAAGATGGGCAGTGCCCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS TCA 90 bp | GCAGCCCTATGCCGTAGCCCTCGATCGCAAAGGGTTTGCCCACGGTaGGCAGCTTGCAGTCCGCATCTATGGACACCTCATAATCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AALCRSPRSQRVCPR*AACSPHLWTPHNPV Trigger: TACTGGATTATGAGGTGTCCATAGATGCGGACTGCAAGCTGCTCACCGTGGGCAAACCCTTTGCGATCGAGGGCTACGGCATAGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS TCA 90 bp | GAGAAGTGCACTGCCCAGCCCGAGGCACAGCAGGACAAACAACCCTaGCAAGTGGTAGACCCCCATCTGCAGCGTCTACTGATGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: EKCTAQPEAQQDKQP*QVVDPHLQRLLMNS Trigger: AGAGTTCATCAGTAGACGCTGCAGATGGGGGTCTACCACTTGTCAGGGTTGTTTGTCCTGCTGTGCCTCGGGCTGGGCAGTGCACTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131816.3 |
||
| CDS TCA 90 bp | ACAGCTGCCCAGCCGGGCACTGCCCATCTTCATCAGATTCCCTGGTaGACACAAATGGGTGTTCCACCAGAGTTACCACTCGCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAAQPGTAHLHQIPW*TQMGVPPELPLAAL Trigger: CAAAGCTGCGAGTGGTAACTCTGGTGGAACACCCATTTGTGTTCACCAGGGAATCTGATGAAGATGGGCAGTGCCCGGCTGGGCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGTTGGGGGCAGACCGGTTTaGGGCAGTGCCTCGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVVFVYRINCRGQCGRVVGGRPV*GSASAG Trigger: GCCCGCCGAGGCACTGCCCAAAACCGGTCTGCCCCC...AACTACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS TCA 90 bp | GATCATGGATTCCAGACAGCTCCTCAAATGTCTTGTCCCCGACCATaGCAGCTGCCAGGTTGGCTGTGTAACTGGATAGCACCAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DHGFQTAPQMSCPRP*QLPGWLCNWIAPAG Trigger: GCCTGCTGGTGCTATCCAGTTACACAGCCAACCTGGCAGCTGTCATGGTCGGGGACAAGACATTTGAGGAGCTGTCTGGAATCCATGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCAAGACGGTACCACGGTaGCGGCCGCGTGGCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVFVYRINCRGQCGKTVPR*RPRGVS Trigger: GCTCACGCCACGCGGCCGCAACCGTGGTACCGTCTT...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTTGCACCCCGGGCCCATaGGAGCAGAGCCACGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VYRVVFVYRINCRGQCGRCTPGP*EQSHGW Trigger: CCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCA...ACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCCGTGTAGTTACCGTCGGCTGCAGGTaGCTCCTCCTTGGGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVVFVYRINCRGQCGRVVTVGCR*LLLGAA Trigger: AGCGGCCCCAAGGAGGAGCAACCTGCAGCCGACGGT...AACTACACGGCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCATGAAGGCGTTGAGCTaGGGCGGGTCGCTCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVFVYRINCRGQCGMKALS*GGSLVS Trigger: GCTCACGAGCGACCCGCCCAAGCTCAACGCCTTCAT...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTGTGGCTGGGAGCGAGCCGAGTaGATACTGAAGCTGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: AVYRVVFVYRINCRGQCGWERAE*ILKLVT Trigger: CGTGACCAGCTTCAGTATCAACTCGGCTCGCTCCCA...GCCACACTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACGCCAGCTGCCTACTGTaGCCCAGGCTGGGGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLIAVYRVVFVYRINASCLL*PRLGHP Trigger: TGGGTGCCCCAGCCTGGGCAACAGTAGGCAGCTGGC...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACGCAGGTTGCTCCTCCTaGGGGCCGCTGCACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLIAVYRVVFVYRINAGCSS*GPLHSC Trigger: GCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGC...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCTCTGCCCTCTCCTGTaGCCCCTCTGGTGGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRYLIAVYRVVFVYRINCLCPLL*PLWWPC Trigger: ACAGGGCCACCAGAGGGGCAACAGGAGAGGGCAGAG...ACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGTCCATGATGAAGGCGTaGAGCTTGGGCGGGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LIAVYRVVFVYRINCRGQSMMKA*SLGGSL Trigger: GAGCGACCCGCCCAAGCTCAACGCCTTCATCATGGA...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | TTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTGGACAGGAAGGGTGGTGCAGCTaGGGATCATGGATTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIAVYRVVFVYRINCRGQEGWCS*GSWIPD Trigger: GTCTGGAATCCATGATCCCAAGCTGCACCACCCTTC...CTGTCCACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CAA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAGCTCCTCAAATGTCTaGTCCCCGACCATGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVPRYLIAVYRVVFVYRISSSNV*SPTMTA Trigger: AGCTGTCATGGTCGGGGACAAGACATTTGAGGAGCT...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | CACGTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAATGAACTCTGACAGGTaGGAGGTGAGCGGCGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HVPRYLIAVYRVVFVYRIMNSDR*EVSGEF Trigger: AAATTCGCCGCTCACCTCCAACCTGTCAGAGTTCAT...TATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAACGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS-3UTR CAA 90 bp | CGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACTGTCGTCGTAAGCTCCATACCTaGAAATGCCGAGACACATGC | + |
|
Preference number: 5 (lower is better) Translates to: RYLIAVYRVVFVYRINCRRKLHT*KCRDTC Trigger: GCATGTGTCTCGGCATTTCAAGGTATGGAGCTTACG...ACGACAGTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCACGCTATTTAATTGCAGTGTACAGAGTCGTGTTTGTATATAGAATAAACATGAAGCCTGAGGACTaGTACCTACTGATGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPRYLIAVYRVVFVYRINMKPED*YLLMNS Trigger: AGAGTTCATCAGTAGGTACAAGTCCTCAGGCTTCAT...GTTTATTCTATATACAAACACGACTCTGTACACTGCAATTAAATAGCGTGGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS GCA 72 bp | CCGGCGCACCCGCCTCCAGCGCCCCGCACCGTCGGCTaGAGGTTGCTCCTCCTTGGGGCCGCTGCACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAHPPPAPRTVG*RLLLLGAAALL Trigger: CAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGCAGCCGACGGTGCGGGGCGCTGGAGGCGGGTGCGCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
||
| CDS TCA 72 bp | TCTCGGCGGGCGCCGCATGCAGCAGGCGCAGTGGCCTaGGCCGGGTGCCATCCCCAAGCTGGGCCCGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRRAPHAAGAVA*AGCHPQAGPAV Trigger: AACTGCGGGCCCAGCTTGGGGATGGCACCCGGCTCAGGCCACTGCGCCTGCTGCATGCGGCGCCCGCCGAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
||
| CDS GCA 72 bp | ACCCGCCTCCAGCGCCCCGCACCGTCGGCTGCAGGTTaGTCCTCCTTGGGGCCGCTGCACTCCTGCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRLQRPAPSAAG*SSLGPLHSCSA Trigger: GGCAGAGCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGCAGCCGACGGTGCGGGGCGCTGGAGGCGGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS CAA 72 bp | CACCCGCCTCCAGCGCCCCGCACCGTCGGCTGCAGGTaGCTCCTCCTTGGGGCCGCTGCACTCCTGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HPPPAPRTVGCR*LLLGAAALLLC Trigger: GCAGAGCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGCAGCCGACGGTGCGGGGCGCTGGAGGCGGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 72 bp | GGCCGTGTAGTTCCTCAGCTCTCGGCGGGCGCCGCATaGAGCAGGCGCAGTGGCCTGAGCCGGGTGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GRVVPQLSAGAA*SRRSGLSRVPS Trigger: GGATGGCACCCGGCTCAGGCCACTGCGCCTGCTGCATGCGGCGCCCGCCGAGAGCTGAGGAACTACACGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131816.3 |
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| CDS CCA 72 bp | CCAGCTCCCGCAGTTCTGCTTGCACCCCGGGCCCATTaGAGCAGAGCCACGGATGGTCCCCGCCAGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PAPAVLLAPRAH*SRATDGPRQPP Trigger: GGGAGGCTGGCGGGGACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS CAA 90 bp | CTCCCGTGCAGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTGCTaGCACCCCGGGCCCATTGGAGCAGAGCCACGGATGGTCCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPCSLNAQLQLPQFC*HPGPIGAEPRMVPA Trigger: GGCGGGGACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGCTGCACGGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS CAA 72 bp | TCCAGCTCCCGCAGTTCTGCTTGCACCCCGGGCCCATaGGAGCAGAGCCACGGATGGTCCCCGCCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSSACTPGP*EQSHGWSPPAS Trigger: GGAGGCTGGCGGGGACCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 72 bp | CTCGGGAAAGGTTATAGAGGCCACCACGCCGGGCGGTaGCAGAACCTGGCACAGACCTCGGGCCAGCGACGC | + |
|
Preference number: 6 (lower is better) Translates to: LGKGYRGHHAGR*QNLAQTSGQRR Trigger: GCGTCGCTGGCCCGAGGTCTGTGCCAGGTTCTGGCACCGCCCGGCGTGGTGGCCTCTATAACCTTTCCCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 72 bp | ATGTGCATGGGCAGTGCTGCAGCCCAGGAGGACGGCTaGAGACACGGGGGTTCCCCCTCCTTCCAGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MCMGSAAAQEDG*RHGGSPSFQRP Trigger: GGGACGCTGGAAGGAGGGGGAACCCCCGTGTCTGCAGCCGTCCTCCTGGGCTGCAGCACTGCCCATGCACAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 72 bp | GGCCCGCTCTGGGTGCATGAGGGCCATGCTGCTGAGTaGCCGAGCCACAAGCTCCACCATGTCGTGGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPLWVHEGHAAE*PSHKLHHVVDG Trigger: GCCGTCCACGACATGGTGGAGCTTGTGGCTCGGGCACTCAGCAGCATGGCCCTCATGCACCCAGAGCGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS GCA 72 bp | GCTGCAGGTTGCTCCTCCTTGGGGCCGCTGCACTCCTaGTCTGCCCTCTCCTGTTGCCCCTCTGGTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGCSSLGPLHS*SALSCCPSGGP Trigger: AGGGCCACCAGAGGGGCAACAGGAGAGGGCAGAGCAGGAGTGCAGCGGCCCCAAGGAGGAGCAACCTGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 72 bp | GTGGTGCTGCCTCTAGGACCTCATGTGCATGGGCAGTaGTGCAGCCCAGGAGGACGGCTGCAGACACGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVLPLGPHVHGQ*CSPGGRLQTRG Trigger: CCCCCGTGTCTGCAGCCGTCCTCCTGGGCTGCAGCACTGCCCATGCACATGAGGTCCTAGAGGCAGCACCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 72 bp | GCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTGCTTaGACCCCGGGCCCATTGGAGCAGAGCCACGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASMRSSSSRSSA*TPGPLEQSHGW Trigger: CCATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS GCA 72 bp | TGCAGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTaGTTGCACCCCGGGCCCATTGGAGCAGAGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLNAQLQLPQF*LHPGPIGAEPR Trigger: CCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
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| CDS CCA 72 bp | TCGCAGCTTTGGCCGGGCCTGGGTGCCAGATGGAGATaGAACTCGGAGAGCAGCCGCCCCTGGCTGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQLWPGLGARWR*NSESSRPWLEV Trigger: GACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
||
| CDS CCA 72 bp | TACCACTCGCAGCTTTGGCCGGGCCTGGGTGCCAGATaGAGATGGAACTCGGAGAGCAGCCGCCCCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YHSQLWPGLGAR*RWNSESSRPWL Trigger: CAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGAGTGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 72 bp | CTTGGGCGGGTCGCTCGTGAGCATGGCCACTCCGTGTaGAGTGGTAGGTGCGCTGTGGCGACGCATGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGRVAREHGHSV*SGRCAVATHVC Trigger: GCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCCATGCTCACGAGCGACCCGCCCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS TCA 72 bp | GACGCATGTGTGCGTGCATCTCGGGGAAGCTCGCCTTaGTGTAGGCCTCCGCGCTGCTCTCCCACACGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DACVRASRGSSP*CRPPRCSPTRC Trigger: GCACCGTGTGGGAGAGCAGCGCGGAGGCCTACATCAAGGCGAGCTTCCCCGAGATGCACGCACACATGCGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS GCA 72 bp | CTCAGCACCGGGGTCTCTGTGGCAGCTGCCAGGAACTaGAATAGCCGTAGCTCAGGCCGCGCCTCGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTGVSVAAARN*NSRSSGRASGK Trigger: CTTTCCCGAGGCGCGGCCTGAGCTACGGCTATTGCAGTTCCTGGCAGCTGCCACAGAGACCCCGGTGCTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS GCA 72 bp | GCTCGTGAGCATGGCCACTCCGTGTGGAGTGGTAGGTaGGCTGTGGCGACGCATGTGTGCGTGCATCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AREHGHSVWSGR*AVATHVCVHLG Trigger: CCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCCATGCTCACGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS CCA 72 bp | GCCAGATGGAGATGGAACTCGGAGAGCAGCCGCCCCTaGCTGGAAGTCCAGCTGTCCATCCTGCCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARWRWNSESSRP*LEVQLSILPAA Trigger: GGCAGCTGGCAGGATGGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
||
| CDS CCA 72 bp | GGAGTAGGAGAAGACGGTACCACGGTTGCGGCCGCGTaGCGTGAGCCCGTAGGGACTCCGCCATTCGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: GVGEDGTTVAAA*REPVGTPPFVQ Trigger: CTGTACGAATGGCGGAGTCCCTACGGGCTCACGCCACGCGGCCGCAACCGTGGTACCGTCTTCTCCTACTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS CAA 72 bp | AGCCTCAATGCGCAGCTCCAGCTCCCGCAGTTCTGCTaGCACCCCGGGCCCATTGGAGCAGAGCCACGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLNAQLQLPQFC*HPGPIGAEPRM Trigger: CATCCGTGGCTCTGCTCCAATGGGCCCGGGGTGCAAGCAGAACTGCGGGAGCTGGAGCTGCGCATTGAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 |
||
| CDS GCA 72 bp | AGCCGAGTTGATACTGAAGCTGGTCACGGCCATGTGTaGCCGACCGGCCAGCAGGTCACCCACCAGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRVDTEAGHGHV*PTGQQVTHQAC Trigger: ACAGGCCTGGTGGGTGACCTGCTGGCCGGTCGGGCACACATGGCCGTGACCAGCTTCAGTATCAACTCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
||
| CDS CCA 72 bp | CCTCCCTCCGTAGGACGCTCAGCACCGGGGTCTCTGTaGCAGCTGCCAGGAACTGCAATAGCCGTAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSVGRSAPGSL*QLPGTAIAVAQ Trigger: CTGAGCTACGGCTATTGCAGTTCCTGGCAGCTGCCACAGAGACCCCGGTGCTGAGCGTCCTACGGAGGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
||
| CDS CCA 72 bp | AGCATGGCCACTCCGTGTGGAGTGGTAGGTGCGCTGTaGCGACGCATGTGTGCGTGCATCTCGGGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SMATPCGVVGAL*RRMCACISGKL Trigger: GAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACACGGAGTGGCCATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
||
| CDS CAA 90 bp | CCATTCTCCAATGCAGTGAAGAGCGCATCCAGCCTGGCCGAGTCATaGGTGCCTGGGTCTAGACACAGCTGCCCAGCCGGGCACTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PFSNAVKSASSLAES*VPGSRHSCPAGHCP Trigger: TGGGCAGTGCCCGGCTGGGCAGCTGTGTCTAGACCCAGGCACCAATGACTCGGCCAGGCTGGATGCGCTCTTCACTGCATTGGAGAATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
||
| CDS TCA 72 bp | GCCTGCCACCCACACAGCCCCTGTGCGGCCCTGAAATaGGGTGTTGCTCAGAAACCTAGCCAAGGTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: ACHPHSPCAALK*GVAQKPSQGAC Trigger: GCACGCACCTTGGCTAGGTTTCTGAGCAACACCTCATTTCAGGGCCGCACAGGGGCTGTGTGGGTGGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 72 bp | GTGTGGAGTGGTAGGTGCGCTGTGGCGACGCATGTGTaGGTGCATCTCGGGGAAGCTCGCCTTGATGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VWSGRCAVATHV*VHLGEARLDVG Trigger: GCCTACATCAAGGCGAGCTTCCCCGAGATGCACGCACACATGCGTCGCCACAGCGCACCTACCACTCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS CCA 72 bp | GCCGCCCGTTTTCAGGTCCTCACAATTTACTGCCGCTaGAAGCAGGGCCCGCTCTGGGTGCATGAGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AARFQVLTIYCR*KQGPLWVHEGH Trigger: ATGGCCCTCATGCACCCAGAGCGGGCCCTGCTTCCAGCGGCAGTAAATTGTGAGGACCTGAAAACGGGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS CCA 72 bp | GATGGAGATGGAACTCGGAGAGCAGCCGCCCCTGGCTaGAAGTCCAGCTGTCCATCCTGCCAGCTGCCTACT | + |
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Preference number: 6 (lower is better) Translates to: DGDGTRRAAAPG*KSSCPSCQLPT Trigger: AGTAGGCAGCTGGCAGGATGGACAGCTGGACTTCCAGCCAGGGGCGGCTGCTCTCCGAGTTCCATCTCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CAA 72 bp | AATGCAGTGAAGAGCGCATCCAGCCTGGCCGAGTCATaGGTGCCTGGGTCTAGACACAGCTGCCCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NAVKSASSLAES*VPGSRHSCPAG Trigger: CCCGGCTGGGCAGCTGTGTCTAGACCCAGGCACCAATGACTCGGCCAGGCTGGATGCGCTCTTCACTGCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | ACTGCCCAGCCCGAGGCACAGCAGGACAAACAACCCTaGCAAGTGGTAGACCCCCATCTGCAGCGTCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: TAQPEAQQDKQP*QVVDPHLQRLR Trigger: ACGGAGACGCTGCAGATGGGGGTCTACCACTTGTCAGGGTTGTTTGTCCTGCTGTGCCTCGGGCTGGGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS GCA 72 bp | CTCAGAGCCGCCCGTTTTCAGGTCCTCACAATTTACTaGCGCTGGAAGCAGGGCCCGCTCTGGGTGCATGAG | + |
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Preference number: 6 (lower is better) Translates to: LRAARFQVLTIY*RWKQGPLWVHE Trigger: CTCATGCACCCAGAGCGGGCCCTGCTTCCAGCGGCAGTAAATTGTGAGGACCTGAAAACGGGCGGCTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS GCA 72 bp | AGGCCAGGTCCTCGGCCAGCCGCTCCAGCAGGTCAATaGAGTAGCCATAACAGCATCTTCTCAGGGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RPGPRPAAPAGQ*SSHNSIFSGCE Trigger: CTCGCACCCTGAGAAGATGCTGTTATGGCTACTGCATTGACCTGCTGGAGCGGCTGGCCGAGGACCTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS GCA 72 bp | GCGGTAGAAGACGTGCTCACCCAGCGAGGTGAGAAGTaGACTGCCCAGCCCGAGGCACAGCAGGACAAACAA | + |
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Preference number: 6 (lower is better) Translates to: AVEDVLTQRGEK*TAQPEAQQDKQ Trigger: TTGTTTGTCCTGCTGTGCCTCGGGCTGGGCAGTGCACTTCTCACCTCGCTGGGTGAGCACGTCTTCTACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 72 bp | GGCTCGTGTGAAGCCAATACTGCAGCTTATTGCCCCTaGGGATGCGCGGCAGCACCAGGCGGTAGAAGACGT | + |
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Preference number: 6 (lower is better) Translates to: GSCEANTAAYCP*GCAAAPGGRRR Trigger: ACGTCTTCTACCGCCTGGTGCTGCCGCGCATCCGCAGGGGCAATAAGCTGCAGTATTGGCTTCACACGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | ACTGCCCAGCCCGAGGCACAGCAGGACAAACAACCCTaGCAAGTGGTAGACCCCCATCTGCAGCGTCTACTG | + |
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Preference number: 6 (lower is better) Translates to: TAQPEAQQDKQP*QVVDPHLQRLL Trigger: CAGTAGACGCTGCAGATGGGGGTCTACCACTTGTCAGGGTTGTTTGTCCTGCTGTGCCTCGGGCTGGGCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131816.3 |
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| CDS GCA 72 bp | TCTTCTGGCTCGTGTGAAGCCAATACTGCAGCTTATTaGCCCTGCGGATGCGCGGCAGCACCAGGCGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SSGSCEANTAAY*PCGCAAAPGGR Trigger: TCTACCGCCTGGTGCTGCCGCGCATCCGCAGGGGCAATAAGCTGCAGTATTGGCTTCACACGAGCCAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS GCA 72 bp | GGCCTGTCCAGCGTCCATCACGCAGGGCCCCGTACTTaGCATCCCCCACAATATAGAGCTCAAAGTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GLSSVHHAGPRT*HPPQYRAQSQR Trigger: CCTTTGACTTTGAGCTCTATATTGTGGGGGATGGCAAGTACGGGGCCCTGCGTGATGGACGCTGGACAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CCA 72 bp | AAATGGGTGTTCCACCAGAGTTACCACTCGCAGCTTTaGCCGGGCCTGGGTGCCAGATGGAGATGGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: KWVFHQSYHSQL*PGLGARWRWNS Trigger: CGAGTTCCATCTCCATCTGGCACCCAGGCCCGGCCAAAGCTGCGAGTGGTAACTCTGGTGGAACACCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | AGACAGTGCGTCCGAAGAGAATGGCGTAGCAGAGGTTaGGAGCGGAGGAGTAGGAGAAGACGGTACCACGGT | + |
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Preference number: 6 (lower is better) Translates to: RQCVRREWRSRG*ERRSRRRRYHG Trigger: ACCGTGGTACCGTCTTCTCCTACTCCTCCGCTCTCAACCTCTGCTACGCCATTCTCTTCGGACGCACTGTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | CCTGTGTTGAGGGCTCGGTGGATCTTCTGGCTCGTGTaGAGCCAATACTGCAGCTTATTGCCCCTGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: PVLRARWIFWLV*SQYCSLLPLRM Trigger: CATCCGCAGGGGCAATAAGCTGCAGTATTGGCTTCACACGAGCCAGAAGATCCACCGAGCCCTCAACACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS CCA 72 bp | AGTGTAGCCCGAAGGCTGTCATTCCCGCTGTCCAACTaGCTCAGGTCCAGCACAAACTTTGGAGCCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SVARRLSFPLSN*LRSSTNFGAWL Trigger: TAGCCAGGCTCCAAAGTTTGTGCTGGACCTGAGCCAGTTGGACAGCGGGAATGACAGCCTTCGGGCTACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS CCA 72 bp | CGGAAGCCTTGGGAAGGGTGGTGCAGCTTGGGATCATaGATTCCAGACAGCTCCTCAAATGTCTTGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RKPWEGWCSLGS*IPDSSSNVLSP Trigger: CGGGGACAAGACATTTGAGGAGCTGTCTGGAATCCATGATCCCAAGCTGCACCACCCTTCCCAAGGCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | GGTGTTGCTCAGAAACCTAGCCAAGGTGCGTGCTGTTaGCTCAGAGCCGCCCGTTTTCAGGTCCTCACAATT | + |
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Preference number: 6 (lower is better) Translates to: GVAQKPSQGACC*LRAARFQVLTI Trigger: AATTGTGAGGACCTGAAAACGGGCGGCTCTGAGTCAACAGCACGCACCTTGGCTAGGTTTCTGAGCAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045085.8 |
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| CDS TCA 72 bp | CAGCCGGGCACTGCCCATCTTCATCAGATTCCCTGGTaGACACAAATGGGTGTTCCACCAGAGTTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: QPGTAHLHQIPW*TQMGVPPELPL Trigger: GAGTGGTAACTCTGGTGGAACACCCATTTGTGTTCACCAGGGAATCTGATGAAGATGGGCAGTGCCCGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS CAA 72 bp | CCTGAGGACTTGTACCTACTGATGAACTCTGACAGGTaGGAGGTGAGCGGCGAATTTTGGGGCAGCCCTATG | + |
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Preference number: 6 (lower is better) Translates to: PEDLYLLMNSDR*EVSGEFWGSPM Trigger: CATAGGGCTGCCCCAAAATTCGCCGCTCACCTCCAACCTGTCAGAGTTCATCAGTAGGTACAAGTCCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045085.8 ENSMUST00000149148.8 |
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| CDS TCA 72 bp | TTCCAGACAGCTCCTCAAATGTCTTGTCCCCGACCATaGCAGCTGCCAGGTTGGCTGTGTAACTGGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: FQTAPQMSCPRP*QLPGWLCNWIA Trigger: TGCTATCCAGTTACACAGCCAACCTGGCAGCTGTCATGGTCGGGGACAAGACATTTGAGGAGCTGTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045085.8 ENSMUST00000131816.3 ENSMUST00000149148.8 |
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