RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIN3A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039579

Ensembl transcript IDs: ENSMUST00000076674.4, ENSMUST00000093859.11

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGATGCTTGGAGCCGAGCTCCCAGATCATTGTTACAGATGGGTaGGAATGGCTAAGGGATGGAACCTACCAAAGGCAGCTGAGGCCC +
Preference number: 1 (lower is better)
Translates to: QGCLEPSSQIIVTDG*EWLRDGTYQRQLRP
Trigger: GGGCCTCAGCTGCCTTTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGAGCTCGGCTCCAAGCATCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp GAAGTGCTTACTGTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTaGGACAGTTTGCCACATTCCATGTTTCCCAGTACTGGAGCCTGG +
Preference number: 1 (lower is better)
Translates to: EVLTVPGPLGEWLGV*DSLPHSMFPSTGAW
Trigger: CCAGGCTCCAGTACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAGTAAGCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 90 bp CGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTaGACACACACGGAAATGAAGACGCAGGGCAAATACTCTTCACAG +
Preference number: 1 (lower is better)
Translates to: RHAHKTAVQFLERSS*THTEMKTQGKYSSQ
Trigger: CTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp CCTACTGTTGGAAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTaGGAAGAGCTGCTGCTGCATCTTAGGCTGAGAACAGCACACTTC +
Preference number: 1 (lower is better)
Translates to: PTVGKISTLETWGRV*EELLLHLRLRTAHF
Trigger: GAAGTGTGCTGTTCTCAGCCTAAGATGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTTCCAACAGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 90 bp GAACAGATGTCCATGTACGGCAGGAGCATGGCTGTCGCTGTCGTGTaGATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACAGGTA +
Preference number: 1 (lower is better)
Translates to: EQMSMYGRSMAVAVV*IEVHYTSALQAEQV
Trigger: TACCTGTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAGCCATGCTCCTGCCGTACATGGACATCTGTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 90 bp ATGGACCCAACACTGAGGAGTTACCTCAGTGATACAGTTGTGTTCTaGGTGGCTCCACGTACATTTCAGGGAGGTGGAAGGGAAGCATCC +
Preference number: 1 (lower is better)
Translates to: MDPTLRSYLSDTVVF*VAPRTFQGGGREAS
Trigger: GGATGCTTCCCTTCCACCTCCCTGAAATGTACGTGGAGCCACTCAGAACACAACTGTATCACTGAGGTAACTCCTCAGTGTTGGGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 90 bp TTGCTCCAAGGCTGTAATGGACCCAACACTGAGGAGTTACCTCAGTaGTACAGTTGTGTTCTGAGTGGCTCCACGTACATTTCAGGGAGG +
Preference number: 1 (lower is better)
Translates to: LLQGCNGPNTEELPQ*YSCVLSGSTYISGR
Trigger: CCTCCCTGAAATGTACGTGGAGCCACTCAGAACACAACTGTATCACTGAGGTAACTCCTCAGTGTTGGGTCCATTACAGCCTTGGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp GGGCACTATCTTTATGTGGGAATCTGTGTAGCTCTTGGTGGAGTGTaGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTC +
Preference number: 1 (lower is better)
Translates to: GHYLYVGICVALGGV*TVCPKVRGIGPLML
Trigger: GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACCAAGAGCTACACAGATTCCCACATAAAGATAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp TTGAAATATGAGTCGTTGAACAGATGTCCATGTACGGCAGGAGCATaGCTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCT +
Preference number: 1 (lower is better)
Translates to: LKYESLNRCPCTAGA*LSLSCELRYTIHRP
Trigger: AGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAGCCATGCTCCTGCCGTACATGGACATCTGTTCAACGACTCATATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp TTACAACTTAGGGCACTATCTTTATGTGGGAATCTGTGTAGCTCTTaGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCC +
Preference number: 1 (lower is better)
Translates to: LQLRALSLCGNLCSS*WSVDSVSQSKRNWA
Trigger: GGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACCAAGAGCTACACAGATTCCCACATAAAGATAGTGCCCTAAGTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 90 bp AATTGGGCCACTGATGCTCCTTTTAGTGATCTGAGCACTCCATTGTaGATTCCTTGTAGACATTACAATGACTGGAGAAGTGAGAACCTA +
Preference number: 1 (lower is better)
Translates to: NWATDAPFSDLSTPL*IPCRHYNDWRSENL
Trigger: TAGGTTCTCACTTCTCCAGTCATTGTAATGTCTACAAGGAATGCACAATGGAGTGCTCAGATCACTAAAAGGAGCATCAGTGGCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 90 bp GTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCTTTCGTaGAATCTTTGTACAAAACACAGCACACTGTTTCACAAATTGCAA +
Preference number: 1 (lower is better)
Translates to: VAVEQNIGLEGLSLS*NLCTKHSTLFHKLQ
Trigger: TTGCAATTTGTGAAACAGTGTGCTGTGTTTTGTACAAAGATTTCACGAAAGGGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp GTGGCTCCTACCCTGTTCATTCAGAATGTTAGGTCAAATCTAGATTaGGGAGTTGTATCAAATCTGCAACACTGGATCATTCTATTTTGT +
Preference number: 1 (lower is better)
Translates to: VAPTLFIQNVRSNLD*GVVSNLQHWIILFC
Trigger: ACAAAATAGAATGATCCAGTGTTGCAGATTTGATACAACTCCCCAATCTAGATTTGACCTAACATTCTGAATGAACAGGGTAGGAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 90 bp ATCAGCACTATAATGATAGCCTCAGATGATTATCTAGCCAACAGTTaGGAACATACAGGAAGTCTAGAGAGCTCATGTTTCTTTTCTTCG +
Preference number: 1 (lower is better)
Translates to: ISTIMIASDDYLANS*EHTGSLESSCFFSS
Trigger: CGAAGAAAAGAAACATGAGCTCTCTAGACTTCCTGTATGTTCCCAACTGTTGGCTAGATAATCATCTGAGGCTATCATTATAGTGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCTCTACCCTGGAGACCTaGGGGCGTGTGTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSSTLET*GRVWEE
Trigger: CTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGA...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCCGTGCACTGGTTCTCTaGTCTGTGGGCAGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGRALVL*SVGRQE
Trigger: CTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACG...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCCCTGCTGCTGCTTGCTaGGTCTTGGCCAGTTTGGCC +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCPAAAC*VLASLA
Trigger: GGCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGG...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCACCTGGGGGCGTGTGTaGGAAGAGCTGCTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGTWGRV*EELLLH
Trigger: ATGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGT...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCACCGGATGTGCTTGGTaGCAGGAGTGGGGAGTAGGG +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGTGCAW*QEWGVG
Trigger: CCCTACTCCCCACTCCTGCCACCAAGCACATCCGGT...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATACCTGGGGGCGTGTGTaGGAAGAGCTGCTGCTGCAT +
Preference number: 2 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDTWGRV*EELLLH
Trigger: ATGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGT...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTGTGCCAGGCCCCCTTaGAGAATGGCTTGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCCARPP*RMAWSV
Trigger: CACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCCCCCTGCCTCCCCTTaGGTGTTTCTTGAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGPPASP*VFLELS
Trigger: AGAAAGCTCAAGAAACACTCAAGGGGAGGCAGGGGG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGAGCCTGAGGATAGGTaGGGGAGTTGCGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSEPEDR*GSCGGA
Trigger: TGCTCCACCGCAACTCCCTCACCTATCCTCAGGCTC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGCCTCAGAGTACCAGTaGCTGAGAAAGGAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSASEYQ*LRKESR
Trigger: TCTGCTCTCCTTTCTCAGCCACTGGTACTCTGAGGC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCCTGTGTAGCTCTTGGTaGAGTGTGGACAGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSLCSSW*SVDSVS
Trigger: GGACACACTGTCCACACTCCACCAAGAGCTACACAG...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCACAGAGTACCAGTGGCTaGGAAAGGAGAGCAGAGACA +
Preference number: 2 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAQSTSG*ERRAET
Trigger: TGTCTCTGCTCTCCTTTCTCAGCCACTGGTACTCTG...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCAGCCTGCTTTGTTCCTaGTGCTGCTTGCTGCGTCTT +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSLLCS*CCLLRL
Trigger: AAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCT...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCCACATGGTGCCAGCTTaGCCAGTCAACCCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSHMVPA*PVNPCL
Trigger: CAGGCAAGGGTTGACTGGCCAAGCTGGCACCATGTG...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGCAGCTGAGGCCCACTaGGCTGAGAATGTAATAGGG +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRAAEAH*AENVIG
Trigger: CCCTATTACATTCTCAGCCCAGTGGGCCTCAGCTGC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCCTTGGAGAATGGCTTaGAGTGTGGGACAGTTTGCC +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGPWRMA*SVGQFA
Trigger: GGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGGCCCCCTTGGAGAATaGCTTGGAGTGTGGGACAGT +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSGPLGE*LGVWDS
Trigger: ACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCAACCCTTGCCTGTGTaGATTCTGAGCTCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGQPLPV*ILSSLH
Trigger: ATGAAGGGAGCTCAGAATTCACACAGGCAAGGGTTG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTTGAAGTGCTTACTGTaGCAGGCCCCCTTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCLKCLL*QAPLEN
Trigger: ATTCTCCAAGGGGGCCTGGCACAGTAAGCACTTCAA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCAACCCTGGTGTAGGGTaGGGATATGGAAACCAGTCA +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCNPGVG*GYGNQS
Trigger: TGACTGGTTTCCATATCCCCACCCTACACCAGGGTT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACAACCCTTGCCTGTGTaGATTCTGAGCTCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRQPLPV*ILSSLH
Trigger: ATGAAGGGAGCTCAGAATTCACACAGGCAAGGGTTG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAGGTGGCCACTGATCTaGAAAAAGCCTCACCTGTGG +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSRWPLI*KKPHLW
Trigger: CCACAGGTGAGGCTTTTTTCAGATCAGTGGCCACCT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCTCAGTAGCTGGGTGCTaGAGTAAAAGGAGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGSVAGC*SKRRKG
Trigger: GCCTTTTCTCCTTTTACTTCAGCACCCAGCTACTGA...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTGCACAAGCACATGGTaGCAGCTTGGCCAGTCAACC +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPCTSTW*QLGQST
Trigger: GGTTGACTGGCCAAGCTGGCACCATGTGCTTGTGCA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCATGATGGTCTCTGGTTaGTTCTGGGATTCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCMMVSG*FWDSSD
Trigger: GTCTGAGGAATCCCAGAAGCAACCAGAGACCATCAT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCCACATGGTGCCAGCTTaGCCAGTCAACCCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGHMVPA*PVNPCL
Trigger: CAGGCAAGGGTTGACTGGCCAAGCTGGCACCATGTG...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGCTCTTGGTGGAGTGTaGACAGTGTGTCCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRALGGV*TVCPKV
Trigger: TACTTTGGGACACACTGTCCACACTCCACCAAGAGC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCCTGCTTGCTGCGTCTTaGCCAGTTTGGCCAAGTAGT +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSLLAAS*PVWPSS
Trigger: ACTACTTGGCCAAACTGGCCAAGACGCAGCAAGCAG...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTACATTTCAGGGAGGTaGAAGGGAAGCATCCATTCC +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCYISGR*KGSIHS
Trigger: GGAATGGATGCTTCCCTTCCACCTCCCTGAAATGTA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCCCCCTGCCTCCCCTTaGGTGTTTCTTGAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSPPASP*VFLELS
Trigger: AGAAAGCTCAAGAAACACTCAAGGGGAGGCAGGGGG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCTGCACAAGCACATGGTaGCAGCTTGGCCAGTCAACC +
Preference number: 2 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGCTSTW*QLGQST
Trigger: GGTTGACTGGCCAAGCTGGCACCATGTGCTTGTGCA...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTTTCTCTTAAGAGCGTaGACTGGTTCTCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGFLLRA*TGSLLC
Trigger: ACAGAGCAGAGAACCAGTGCACGCTCTTAAGAGAAA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGCCTCAGAGTACCAGTaGCTGAGAAAGGAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNASEYQ*LRKESR
Trigger: TCTGCTCTCCTTTCTCAGCCACTGGTACTCTGAGGC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGCAGAAATACTTTTGTaGCACCAGGTGAAAAGGTTG +
Preference number: 2 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSAEILL*HQVKRL
Trigger: CAACCTTTTCACCTGGTGCCACAAAAGTATTTCTGC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATCTCCCAGATCCCTTCTaGTTAAGTCTTGGACATCAG +
Preference number: 2 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDLPDPF*LSLGHQ
Trigger: CTGATGTCCAAGACTTAACCAGAAGGGATCTGGGAG...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAACCCTGGTGTAGGGTaGGGATATGGAAACCAGTCA +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSNPGVG*GYGNQS
Trigger: TGACTGGTTTCCATATCCCCACCCTACACCAGGGTT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAGGTATACTTCCAAATaGAACCCTGGTGTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRRYTSK*NPGVGW
Trigger: CCACCCTACACCAGGGTTCCATTTGGAAGTATACCT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCATTGTTACAGATGGGTaGGAATGGCTAAGGGATGGA +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGIVTDG*EWLRDG
Trigger: TCCATCCCTTAGCCATTCCCACCCATCTGTAACAAT...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 90 bp CCCCTTAGACAGACTTTACTCCTGACTAACTCTAGGTTCCTACTGTaGGAAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: PLRQTLLLTNSRFLL*ERFLPWRPGGVCGK
Trigger: CTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTTCCAACAGTAGGAACCTAGAGTTAGTCAGGAGTAAAGTCTGTCTAAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 90 bp AGCTTACCCAATTCATGCTTGAAGTGCTTACTGTGCCAGGCCCCCTaGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGT +
Preference number: 2 (lower is better)
Translates to: SLPNSCLKCLLCQAP*ENGLECGTVCHIPC
Trigger: ACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAGTAAGCACTTCAAGCATGAATTGGGTAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTCAGTAGCTGGGTGCTaGAGTAAAAGGAGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSSVAGC*SKRRKG
Trigger: GCCTTTTCTCCTTTTACTTCAGCACCCAGCTACTGA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGAACCTAAGCAACACTaGCTGATAAACAAGGTATAC +
Preference number: 2 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSEPKQH*LINKVY
Trigger: GTATACCTTGTTTATCAGTCAGTGTTGCTTAGGTTC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACCCTCAGTGAAATGTTaGATCTGTGAAGCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: VDSSKPALFLLLLAASWPPSVKC*ICEAEV
Trigger: GACTTCAGCTTCACAGATTCAACATTTCACTGAGGG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCGATTTCCTGATCCAATaGAATAGAAACTCAGGACGC +
Preference number: 2 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGDFLIQ*NRNSGR
Trigger: GCGTCCTGAGTTTCTATTTCATTGGATCAGGAAATC...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTACCCAATTCATGCTTaGAGTGCTTACTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSYPIHA*SAYCAR
Trigger: CCTGGCACAGTAAGCACTTCAAGCATGAATTGGGTA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCTTTAAAAGCACCCTGTaGTTTGTTGGTGTCCCATCA +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGFKSTL*FVGVPS
Trigger: TGATGGGACACCAACAAAGCACAGGGTGCTTTTAAA...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTTTCTTGAGCTTTCTTaGACTCCCAGGTTTACTCCT +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCFLELS*TPRFTP
Trigger: AGGAGTAAACCTGGGAGTGCAAGAAAGCTCAAGAAA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGTTCCTGCTGCTGCTTaGTGCGTCTTGGCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: LENGLECGTVCHIPCFPVVPAAA*CVLASL
Trigger: CAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAAC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCAAAAAGCCTCACCTGTaGTGTGCAGAATTTCCCTTA +
Preference number: 2 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGKKPHL*CAEFPL
Trigger: TAAGGGAAATTCTGCACACCACAGGTGAGGCTTTTT...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGCTCTTGGTGGAGTGTaGACAGTGTGTCCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNALGGV*TVCPKV
Trigger: TACTTTGGGACACACTGTCCACACTCCACCAAGAGC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACACAGATGGGTGGGAATaGCTAAGGGATGGAACCTAC +
Preference number: 2 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNTDGWE*LRDGTY
Trigger: GTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGT...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 90 bp GGACATGAAAGCATTTTAAGCAGTGTTGACAGCAGTAAGCCTGCTTaGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: GHESILSSVDSSKPA*FLLLLAASWPVWPS
Trigger: ACTTGGCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAACACTGCTTAAAATGCTTTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACAGAGTACCAGTGGCTaGGAAAGGAGAGCAGAGACA +
Preference number: 2 (lower is better)
Translates to: LENGLECGTVCHIPCFPVQSTSG*ERRAET
Trigger: TGTCTCTGCTCTCCTTTCTCAGCCACTGGTACTCTG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCAGGGCTTCCCTCAGTaGAATGTTGAATCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNQGFPQ*NVESVK
Trigger: CTTCACAGATTCAACATTTCACTGAGGGAAGCCCTG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTCCTTCCTTCTCACATaGCTAGAGGTAGCCAAACTT +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSSFLLT*LEVAKL
Trigger: AAGTTTGGCTACCTCTAGGCATGTGAGAAGGAAGGA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACTGAGCACTCCATTGTaGATTCCTTGTAGACATTAC +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRLSTPL*IPCRHY
Trigger: GTAATGTCTACAAGGAATGCACAATGGAGTGCTCAG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGATTTCTTGAGCTTTCTTaGACTCCCAGGTTTACTCCT +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRFLELS*TPRFTP
Trigger: AGGAGTAAACCTGGGAGTGCAAGAAAGCTCAAGAAA...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCACAGATGGGTGGGAATaGCTAAGGGATGGAACCTAC +
Preference number: 2 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSTDGWE*LRDGTY
Trigger: GTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGT...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCATTGTTACAGATGGGTaGGAATGGCTAAGGGATGGA +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSIVTDG*EWLRDG
Trigger: TCCATCCCTTAGCCATTCCCACCCATCTGTAACAAT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTCCCTCAGTGAAATGTTaGATCTGTGAAGCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPPSVKC*ICEAEV
Trigger: GACTTCAGCTTCACAGATTCAACATTTCACTGAGGG...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTCTTTACCTAGGACATaGAAGCATTTTAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCSLPRT*KHFKQC
Trigger: ACACTGCTTAAAATGCTTTCATGTCCTAGGTAAAGA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATTATCTCTTGTTGAGGTaGAGAGAAAGGGCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDYLLLR*RERAKK
Trigger: CTTTTTAGCCCTTTCTCTGCACCTCAACAAGAGATA...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATTATCTAGCCAACAGTTaGGAACATACAGGAAGTCTA +
Preference number: 2 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDYLANS*EHTGSL
Trigger: TAGACTTCCTGTATGTTCCCAACTGTTGGCTAGATA...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTTCTCTGAGAATAACTaGTGTGTTAGGGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPFSENN*CVRAVV
Trigger: CACCACAGCCCTAACACACCAGTTATTCTCAGAGAA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAGACATTACAATGACTaGAGAAGTGAGAACCTAAGC +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRRHYND*RSENLS
Trigger: GCTTAGGTTCTCACTTCTCCAGTCATTGTAATGTCT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCGAACCTAAGCAACACTaGCTGATAAACAAGGTATAC +
Preference number: 2 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLEPKQH*LINKVY
Trigger: GTATACCTTGTTTATCAGTCAGTGTTGCTTAGGTTC...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACAGGGCTTCCCTCAGTaGAATGTTGAATCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LENGLECGTVCHIPCFPVQGFPQ*NVESVK
Trigger: CTTCACAGATTCAACATTTCACTGAGGGAAGCCCTG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACTCCATTTAACTCCTTaGTCAAGTGTTCTGATTACA +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRLHLTP*SSVLIT
Trigger: TGTAATCAGAACACTTGAGCAAGGAGTTAAATGGAG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTCTAGGTTCCTACTGTTaGAAAGATTTCTACCCTGGA +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPLGSYC*KDFYPG
Trigger: TCCAGGGTAGAAATCTTTCCAACAGTAGGAACCTAG...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAGGTCAAATCTAGATTaGGGAGTTGTATCAAATCTG +
Preference number: 2 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRRSNLD*GVVSNL
Trigger: CAGATTTGATACAACTCCCCAATCTAGATTTGACCT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTAAAAAGCCTCACCTGTaGTGTGCAGAATTTCCCTTA +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPKKPHL*CAEFPL
Trigger: TAAGGGAAATTCTGCACACCACAGGTGAGGCTTTTT...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTATCTAGCCAACAGTTaGGAACATACAGGAAGTCTA +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSYLANS*EHTGSL
Trigger: TAGACTTCCTGTATGTTCCCAACTGTTGGCTAGATA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACTCCCAGATCCCTTCTaGTTAAGTCTTGGACATCAG +
Preference number: 2 (lower is better)
Translates to: LENGLECGTVCHIPCFPVLPDPF*LSLGHQ
Trigger: CTGATGTCCAAGACTTAACCAGAAGGGATCTGGGAG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAGACATTACAATGACTaGAGAAGTGAGAACCTAAGC +
Preference number: 2 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSRHYND*RSENLS
Trigger: GCTTAGGTTCTCACTTCTCCAGTCATTGTAATGTCT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAAATCTGTGTAGCTCTTaGTGGAGTGTGGACAGTGTG +
Preference number: 2 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQNLCSS*WSVDSV
Trigger: CACACTGTCCACACTCCACCAAGAGCTACACAGATT...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCACCTTCAGGGATAATTaGTTTGCATTACAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCTFRDN*FALQKD
Trigger: ATCCTTTTGTAATGCAAACCAATTATCCCTGAAGGT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTATCTCTTGTTGAGGTaGAGAGAAAGGGCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPYLLLR*RERAKK
Trigger: CTTTTTAGCCCTTTCTCTGCACCTCAACAAGAGATA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCTTTAAAAGCACCCTGTaGTTTGTTGGTGTCCCATCA +
Preference number: 2 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGFKSTL*FVGVPS
Trigger: TGATGGGACACCAACAAAGCACAGGGTGCTTTTAAA...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCCTAGGTTCCTACTGTTaGAAAGATTTCTACCCTGGA +
Preference number: 2 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGLGSYC*KDFYPG
Trigger: TCCAGGGTAGAAATCTTTCCAACAGTAGGAACCTAG...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCATTTATGATGGTCTCTaGTTGCTTCTGGGATTCCTC +
Preference number: 2 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSIYDGL*LLLGFL
Trigger: GAGGAATCCCAGAAGCAACCAGAGACCATCATAAAT...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCTGCTTGCTGCGTCTTaGCCAGTTTGGCCAAGTAGT +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLLAAS*PVWPSS
Trigger: ACTACTTGGCCAAACTGGCCAAGACGCAGCAAGCAG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCCCTTGAGTGTTTCTTaGGCTTTCTTGCACTCCCAG +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILPLSVS*AFLHSQ
Trigger: CTGGGAGTGCAAGAAAGCTCAAGAAACACTCAAGGG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACTAAGGACATGGCCTTaGTGCTTTCTCCTTTATAGA +
Preference number: 2 (lower is better)
Translates to: LENGLECGTVCHIPCFPVLRTWP*CFLLYR
Trigger: TCTATAAAGGAGAAAGCAGCAAGGCCATGTCCTTAG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAGCAGAAATACTTTTGTaGCACCAGGTGAAAAGGTTG +
Preference number: 2 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQAEILL*HQVKRL
Trigger: CAACCTTTTCACCTGGTGCCACAAAAGTATTTCTGC...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTAGGTCAAATCTAGATTaGGGAGTTGTATCAAATCTG +
Preference number: 2 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPRSNLD*GVVSNL
Trigger: CAGATTTGATACAACTCCCCAATCTAGATTTGACCT...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAACAAAGTAAGAGGAATTaGGCCACTGATGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQQSKRN*ATDAPF
Trigger: AAAAGGAGCATCAGTGGCCCAATTCCTCTTACTTTG...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 90 bp AGGAATTGGGCCACTGATGCTCCTTTTAGTGATCTGAGCACTCCATaGTGCATTCCTTGTAGACATTACAATGACTGGAGAAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: RNWATDAPFSDLSTP*CIPCRHYNDWRSEN
Trigger: GTTCTCACTTCTCCAGTCATTGTAATGTCTACAAGGAATGCACAATGGAGTGCTCAGATCACTAAAAGGAGCATCAGTGGCCCAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTACCCAATTCATGCTTaGAGTGCTTACTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILYPIHA*SAYCAR
Trigger: CCTGGCACAGTAAGCACTTCAAGCATGAATTGGGTA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR TCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCTAAATGAAAGAGAGTaGGGAACCCCTAGACCGGAT +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLNERE*GTPRPD
Trigger: ATCCGGTCTAGGGGTTCCTCACTCTCTTTCATTTAG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGAGTTGTATCAAATCTaGAACACTGGATCATTCTAT +
Preference number: 2 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNELYQI*NTGSFY
Trigger: ATAGAATGATCCAGTGTTGCAGATTTGATACAACTC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAACTCCATTTAACTCCTTaGTCAAGTGTTCTGATTACA +
Preference number: 2 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQLHLTP*SSVLIT
Trigger: TGTAATCAGAACACTTGAGCAAGGAGTTAAATGGAG...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCAGCCCGTTCTAACTTaGTTTTATTTGCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILQPVLT*FYLLEG
Trigger: TCCCTCCAGCAAATAAAAGCAAGTTAGAACGGGCTG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCTAAGGACATGGCCTTaGTGCTTTCTCCTTTATAGA +
Preference number: 2 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLRTWP*CFLLYR
Trigger: TCTATAAAGGAGAAAGCAGCAAGGCCATGTCCTTAG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 90 bp GGAGCAGAATATAGGTTTAGAAGGACTCTCCCTTTCGTGAAATCTTaGTACAAAACACAGCACACTGTTTCACAAATTGCAAAACACTGT +
Preference number: 2 (lower is better)
Translates to: GAEYRFRRTLPFVKS*YKTQHTVSQIAKHC
Trigger: ACAGTGTTTTGCAATTTGTGAAACAGTGTGCTGTGTTTTGTACAAAGATTTCACGAAAGGGAGAGTCCTTCTAAACCTATATTCTGCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCTGTGCCAGGCCCCCTaGGAGAATGGCTTGGAGTGT +
Preference number: 3 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGLCQAP*ENGLEC
Trigger: ACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCCTAGACCGGATGTGCTaGGTGGCAGGAGTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCLDRMC*VAGVGS
Trigger: ACTCCCCACTCCTGCCACCAAGCACATCCGGTCTAG...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGCACCCTGTGCTTTGTaGGTGTCCCATCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSAPCAL*VSHQHV
Trigger: AACATGCTGATGGGACACCAACAAAGCACAGGGTGC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCCATTCTTTAGCCACATaGCCTTTCTGGCCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSHSLAT*PFWPRA
Trigger: AGCCCTGGGCCAGAAAGGCAATGTGGCTAAAGAATG...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCGCACCCTGTGCTTTGTaGGTGTCCCATCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCAPCAL*VSHQHV
Trigger: AACATGCTGATGGGACACCAACAAAGCACAGGGTGC...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCATTCTTTAGCCACATaGCCTTTCTGGCCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGHSLAT*PFWPRA
Trigger: AGCCCTGGGCCAGAAAGGCAATGTGGCTAAAGAATG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCCCCCTTGAGTGTTTCTaGAGCTTTCTTGCACTCCCA +
Preference number: 3 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSPLECF*SFLALP
Trigger: TGGGAGTGCAAGAAAGCTCAAGAAACACTCAAGGGG...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp GAAAAGTGGCTGGAGCAAAACAGCCTGTTCACGCCATaGTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAG +
Preference number: 3 (lower is better)
Translates to: EKWLEQNSLFTP*SQDSGAVLGAE
Trigger: CTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACAGGCTGTTTTGCTCCAGCCACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp TCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTaGAGCCGAGCTCCCAGATCATTGTTACAGATGGGT +
Preference number: 3 (lower is better)
Translates to: SALQAEQVTRDA*SRAPRSLLQMG
Trigger: ACCCATCTGTAACAATGATCTGGGAGCTCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCAACAGCACACTTCATTaGCCAGACCCCACACCTTTG +
Preference number: 3 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCNSTLH*PDPTPL
Trigger: CAAAGGTGTGGGGTCTGGCAAATGAAGTGTGCTGTT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAAACAGCACACTTCATTaGCCAGACCCCACACCTTTG +
Preference number: 3 (lower is better)
Translates to: KDFYPGDLGACVGRAAAANSTLH*PDPTPL
Trigger: CAAAGGTGTGGGGTCTGGCAAATGAAGTGTGCTGTT...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGCCTCTCGGGTACAGTaGAAATATGAGTCGTTGAAC +
Preference number: 3 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSASRVQ*KYESLN
Trigger: GTTCAACGACTCATATTTCAACTGTACCCGAGAGGC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp TCCATGTACGGCAGGAGCATGGCTGTCGCTGTCGTGTaGATTGAGGTACACTATACATCGGCCTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: SMYGRSMAVAVV*IEVHYTSALQA
Trigger: AGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAGCCATGCTCCTGCCGTACATGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp GCAGTGTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTaGTGCTTGCTGCGTCTTGGCCAGTTTGGCCAAGTA +
Preference number: 3 (lower is better)
Translates to: AVLTAVSLLCSC*CLLRLGQFGQV
Trigger: TACTTGGCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAACACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp ACCAGCTTACCCAATTCATGCTTGAAGTGCTTACTGTaGCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGG +
Preference number: 3 (lower is better)
Translates to: TSLPNSCLKCLL*QAPLENGLECG
Trigger: CCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAGTAAGCACTTCAAGCATGAATTGGGTAAGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp CACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTaGACACACACGGAAATGAAGACGCAGGGCAAATAC +
Preference number: 3 (lower is better)
Translates to: HKTAVQFLERSS*THTEMKTQGKY
Trigger: GTATTTGCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp AACTCTAGGTTCCTACTGTTGGAAAGATTTCTACCCTaGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: NSRFLLLERFLP*RPGGVCGKSCC
Trigger: GCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTTCCAACAGTAGGAACCTAGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp AAGGGATGGAACCTACCAAAGGCAGCTGAGGCCCACTaGGCTGAGAATGTAATAGGGCATGAGGATGCTGCA +
Preference number: 3 (lower is better)
Translates to: KGWNLPKAAEAH*AENVIGHEDAA
Trigger: TGCAGCATCCTCATGCCCTATTACATTCTCAGCCCAGTGGGCCTCAGCTGCCTTTGGTAGGTTCCATCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp CCGAGCTCCCAGATCATTGTTACAGATGGGTGGGAATaGCTAAGGGATGGAACCTACCAAAGGCAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: PSSQIIVTDGWE*LRDGTYQRQLR
Trigger: CCTCAGCTGCCTTTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGAGCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp ACTGTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTaGGACAGTTTGCCACATTCCATGTTTCCCAGTACT +
Preference number: 3 (lower is better)
Translates to: TVPGPLGEWLGV*DSLPHSMFPST
Trigger: AGTACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAATGCTGCAGAGCTCTTaGTCCTGTTTTCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRMLQSS*SCFQGF
Trigger: GAAGCCCTGAAAACAGGACAAAGAGCTCTGCAGCAT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCGCCTCTCGGGTACAGTaGAAATATGAGTCGTTGAAC +
Preference number: 3 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGASRVQ*KYESLN
Trigger: GTTCAACGACTCATATTTCAACTGTACCCGAGAGGC...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp TTGGAGCCGAGCTCCCAGATCATTGTTACAGATGGGTaGGAATGGCTAAGGGATGGAACCTACCAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: LEPSSQIIVTDG*EWLRDGTYQRQ
Trigger: CTGCCTTTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGAGCTCGGCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCATATGATGGTCTCTGGTaGCTTCTGGGATTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: VDSSKPALFLLLLAASWPYDGLW*LLGFLR
Trigger: TCTGAGGAATCCCAGAAGCAACCAGAGACCATCATA...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCACCAGGTGAAAAGGTaGACAGGAGCCAGAGTTGTC +
Preference number: 3 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSHQVKR*TGARVV
Trigger: GACAACTCTGGCTCCTGTCAACCTTTTCACCTGGTG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTTATCTAGCCAACAGTaGGGAACATACAGGAAGTCT +
Preference number: 3 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCLSSQQ*GTYRKS
Trigger: AGACTTCCTGTATGTTCCCAACTGTTGGCTAGATAA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCGAGCTCCCAGATCATaGTTACAGATGGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNRAPRS*LQMGGN
Trigger: ATTCCCACCCATCTGTAACAATGATCTGGGAGCTCG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp ATGCTTGGAGCCGAGCTCCCAGATCATTGTTACAGATaGGTGGGAATGGCTAAGGGATGGAACCTACCAAAG +
Preference number: 3 (lower is better)
Translates to: MLGAELPDHCYR*VGMAKGWNLPK
Trigger: CTTTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGAGCTCGGCTCCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATAAAGCAGAAATACTTTaGTGGCACCAGGTGAAAAGG +
Preference number: 3 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDKAEIL*WHQVKR
Trigger: CCTTTTCACCTGGTGCCACAAAAGTATTTCTGCTTT...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTATGATGGTCTCTGGTaGCTTCTGGGATTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNYDGLW*LLGFLR
Trigger: TCTGAGGAATCCCAGAAGCAACCAGAGACCATCATA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCATTATCTAGCCAACAGTaGGGAACATACAGGAAGTCT +
Preference number: 3 (lower is better)
Translates to: VDSSKPALFLLLLAASWPLSSQQ*GTYRKS
Trigger: AGACTTCCTGTATGTTCCCAACTGTTGGCTAGATAA...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCCTTTCGTGAAATCTTaGTACAAAACACAGCACACT +
Preference number: 3 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGPFVKS*YKTQHT
Trigger: AGTGTGCTGTGTTTTGTACAAAGATTTCACGAAAGG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp ACACTGAGGAGTTACCTCAGTGATACAGTTGTGTTCTaGGTGGCTCCACGTACATTTCAGGGAGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: TLRSYLSDTVVF*VAPRTFQGGGR
Trigger: CCTTCCACCTCCCTGAAATGTACGTGGAGCCACTCAGAACACAACTGTATCACTGAGGTAACTCCTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp CGTTTCCTAGTCAAACAAACCAGCTTACCCAATTCATaGTTGAAGTGCTTACTGTGCCAGGCCCCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: RFLVKQTSLPNS*LKCLLCQAPLE
Trigger: CTCCAAGGGGGCCTGGCACAGTAAGCACTTCAAGCATGAATTGGGTAAGCTGGTTTGTTTGACTAGGAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp GCCAAACTTCCAGAGCAGTGCTTCTCTGAGAATAACTaGTGTGTTAGGGCTGTGGTGTGTCCTAGGGTGTTA +
Preference number: 3 (lower is better)
Translates to: AKLPEQCFSENN*CVRAVVCPRVL
Trigger: TAACACCCTAGGACACACCACAGCCCTAACACACCAGTTATTCTCAGAGAAGCACTGCTCTGGAAGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp GAGTCGTTGAACAGATGTCCATGTACGGCAGGAGCATaGCTGTCGCTGTCGTGTGAATTGAGGTACACTATA +
Preference number: 3 (lower is better)
Translates to: ESLNRCPCTAGA*LSLSCELRYTI
Trigger: TATAGTGTACCTCAATTCACACGACAGCGACAGCCATGCTCCTGCCGTACATGGACATCTGTTCAACGACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp TGTGTTCTGAGTGGCTCCACGTACATTTCAGGGAGGTaGAAGGGAAGCATCCATTCCGGTATAGGGTTTGTA +
Preference number: 3 (lower is better)
Translates to: CVLSGSTYISGR*KGSIHSGIGFV
Trigger: TACAAACCCTATACCGGAATGGATGCTTCCCTTCCACCTCCCTGAAATGTACGTGGAGCCACTCAGAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACGAGCTCCCAGATCATaGTTACAGATGGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: LENGLECGTVCHIPCFPVRAPRS*LQMGGN
Trigger: ATTCCCACCCATCTGTAACAATGATCTGGGAGCTCG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp ATGGCTGCCTCTTTGGCTATCCAGCCCGTTCTAACTTaGTTTTATTTGCTGGAGGGATACTCTCCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: MAASLAIQPVLT*FYLLEGYSPLV
Trigger: CACAAGAGGAGAGTATCCCTCCAGCAAATAAAAGCAAGTTAGAACGGGCTGGATAGCCAAAGAGGCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp CTTTATGTGGGAATCTGTGTAGCTCTTGGTGGAGTGTaGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCA +
Preference number: 3 (lower is better)
Translates to: LYVGICVALGGV*TVCPKVRGIGP
Trigger: TGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACCAAGAGCTACACAGATTCCCACATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp AGGGCACTATCTTTATGTGGGAATCTGTGTAGCTCTTaGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGG +
Preference number: 3 (lower is better)
Translates to: RALSLCGNLCSS*WSVDSVSQSKR
Trigger: CCTCTTACTTTGGGACACACTGTCCACACTCCACCAAGAGCTACACAGATTCCCACATAAAGATAGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGGTAGACTCCGGTATTaGACATTTATGATGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNGRLRY*TFMMVS
Trigger: AGAGACCATCATAAATGTCAAATACCGGAGTCTACC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCCCAGACCCCACACCTTaGTCAATAGATATAAAAGAG +
Preference number: 3 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGPDPTP*SIDIKE
Trigger: CTCTTTTATATCTATTGACAAAGGTGTGGGGTCTGG...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCAAAGCAGAAATACTTTaGTGGCACCAGGTGAAAAGG +
Preference number: 3 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGKAEIL*WHQVKR
Trigger: CCTTTTCACCTGGTGCCACAAAAGTATTTCTGCTTT...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCCTCCATTTAACTCCTaGCTCAAGTGTTCTGATTAC +
Preference number: 3 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSPPFNS*LKCSDY
Trigger: GTAATCAGAACACTTGAGCAAGGAGTTAAATGGAGG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp CTTTCTGGCCCAGGGCTTTATTTTAAAAGCACCCTGTaGTTTGTTGGTGTCCCATCAGCATGTTCCTACTCA +
Preference number: 3 (lower is better)
Translates to: LSGPGLYFKSTL*FVGVPSACSYS
Trigger: TGAGTAGGAACATGCTGATGGGACACCAACAAAGCACAGGGTGCTTTTAAAATAAAGCCCTGGGCCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAACCAGACCCCACACCTTaGTCAATAGATATAAAAGAG +
Preference number: 3 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQPDPTP*SIDIKE
Trigger: CTCTTTTATATCTATTGACAAAGGTGTGGGGTCTGG...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGGTAGACTCCGGTATTaGACATTTATGATGGTCTCT +
Preference number: 3 (lower is better)
Translates to: LENGLECGTVCHIPCFPVGRLRY*TFMMVS
Trigger: AGAGACCATCATAAATGTCAAATACCGGAGTCTACC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACCTCCATTTAACTCCTaGCTCAAGTGTTCTGATTAC +
Preference number: 3 (lower is better)
Translates to: LENGLECGTVCHIPCFPVPPFNS*LKCSDY
Trigger: GTAATCAGAACACTTGAGCAAGGAGTTAAATGGAGG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CCA 72 bp GCACTATCTTTATGTGGGAATCTGTGTAGCTCTTGGTaGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: ALSLCGNLCSSW*SVDSVSQSKRN
Trigger: ATTCCTCTTACTTTGGGACACACTGTCCACACTCCACCAAGAGCTACACAGATTCCCACATAAAGATAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp AGAGGAATTGGGCCACTGATGCTCCTTTTAGTGATCTaGGCACTCCATTGTGCATTCCTTGTAGACATTACA +
Preference number: 3 (lower is better)
Translates to: RGIGPLMLLLVI*ALHCAFLVDIT
Trigger: TGTAATGTCTACAAGGAATGCACAATGGAGTGCTCAGATCACTAAAAGGAGCATCAGTGGCCCAATTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp AGTCTTGGACATCAGCACTATAATGATAGCCTCAGATaGTTATCTAGCCAACAGTTGGGAACATACAGGAAG +
Preference number: 3 (lower is better)
Translates to: SLGHQHYNDSLR*LSSQQLGTYRK
Trigger: CTTCCTGTATGTTCCCAACTGTTGGCTAGATAATCATCTGAGGCTATCATTATAGTGCTGATGTCCAAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR GCA 72 bp ACTGATGCTCCTTTTAGTGATCTGAGCACTCCATTGTaGATTCCTTGTAGACATTACAATGACTGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: TDAPFSDLSTPL*IPCRHYNDWRS
Trigger: ACTTCTCCAGTCATTGTAATGTCTACAAGGAATGCACAATGGAGTGCTCAGATCACTAAAAGGAGCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp CTTTTCTTCGTGCCAAGCAATTATATGACTAGAAAGTaGTGCCTAAACAAAGGGGAAGCTAGGCTAATTGCA +
Preference number: 3 (lower is better)
Translates to: LFFVPSNYMTRK*CLNKGEARLIA
Trigger: TGCAATTAGCCTAGCTTCCCCTTTGTTTAGGCATCACTTTCTAGTCATATAATTGCTTGGCACGAAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp GAGCAGAATATAGGTTTAGAAGGACTCTCCCTTTCGTaGAATCTTTGTACAAAACACAGCACACTGTTTCAC +
Preference number: 3 (lower is better)
Translates to: EQNIGLEGLSLS*NLCTKHSTLFH
Trigger: GTGAAACAGTGTGCTGTGTTTTGTACAAAGATTTCACGAAAGGGAGAGTCCTTCTAAACCTATATTCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR TCA 72 bp CTTTTTCAAAAACTCCAAAGTAGTTTCTTCTCTTCTTaGTCCACACAAGGTGGTGGTCAACTTTGCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LFQKLQSSFFSS*STQGGGQLCSK
Trigger: CTTGGAGCAAAGTTGACCACCACCTTGTGTGGATCAAGAAGAGAAGAAACTACTTTGGAGTTTTTGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCTTGCGGGAGCCGGGTaGACCCCGGCCATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGLAGAG*TPAMQG
Trigger: GCCCTGCATGGCCGGGGTCCACCCGGCTCCCGCAAG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACTTGCGGGAGCCGGGTaGACCCCGGCCATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPLAGAG*TPAMQG
Trigger: GCCCTGCATGGCCGGGGTCCACCCGGCTCCCGCAAG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGTCCAGGGTTGCAAGTaGACCGCGCCCACCCTCACC +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSVQGCK*TAPTLT
Trigger: GGTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGAC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAGCCGTGGTCCAGGGTTaGAAGTGCACCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAAVVQG*KCTAPT
Trigger: GGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGC...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCGGTGGACCCCGGCCATaGAGGGCGCTCCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGGGPRP*RALPNQ
Trigger: TTGGTTGGGGAGCGCCCTGCATGGCCGGGGTCCACC...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGCGACTGGCTGCGCGTaGGGCCGTGGTCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNATGCA*GRGPGL
Trigger: CAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCATTTCGCCCTGGCTCTaGGGGAAGGCCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCISPWL*GKASSA
Trigger: AGCGCTGCTGGCCTTCCCCCAGAGCCAGGGCGAAAT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATCGTGTCCGATGCGCTTaGGGATCTGGCAGGGTTGCG +
Preference number: 4 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDRVRCA*GSGRVA
Trigger: CGCAACCCTGCCAGATCCTCAAGCGCATCGGACACG...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGGGAGAGGGATGTCCTaGTGGGTCTGGGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPGRGMS*WVWVPS
Trigger: GCTGGGTACCCAGACCCATCAGGACATCCCTCTCCC...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCAGAGAAAGGCATAAGTaGCAGGTCGCCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCRERHK*QVAQAR
Trigger: GCGGGCCTGGGCGACCTGCCACTTATGCCTTTCTCT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSGVAT*RLQWEL
Trigger: CAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACT...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGTCCAGGGTTGCAAGTaGACCGCGCCCACCCTCACC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNVQGCK*TAPTLT
Trigger: GGTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGAC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCAGGAGAAAGGGTCACTaGTCCACGGTGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGRRKGH*STVSLG
Trigger: CCCCAAGCTCACCGTGGAGCAGTGACCCTTTCTCCT...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAGGCTCCAATGGGAGCTaGTGTGTCTCGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAGSNGS*CVSSPH
Trigger: GTGAGGACTCGAGACACAGCAGCTCCCATTGGAGCC...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCGGCTCCAATGGGAGCTaGTGTGTCTCGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGGSNGS*CVSSPH
Trigger: GTGAGGACTCGAGACACAGCAGCTCCCATTGGAGCC...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAATGCGCTTGAGGATCTaGCAGGGTTGCGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRMRLRI*QGCGCE
Trigger: CTCGCACCCGCAACCCTGCCAGATCCTCAAGCGCAT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAGCGACTGGCTGCGCGTaGGGCCGTGGTCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQATGCA*GRGPGL
Trigger: CAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGC...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATCTGGCTCATCCCTCTaGGCACCCGCCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQSGSSL*APALPP
Trigger: CGGCGGCAGGGCGGGTGCCCAGAGGGATGAGCCAGA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCCCAGGCCCGCCTCGATaGCCATCACTACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCPGPPR*PSLLPK
Trigger: CTTTGGAAGTAGTGATGGCCATCGAGGCGGGCCTGG...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATAGAGAAAGGCATAAGTaGCAGGTCGCCCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDRERHK*QVAQAR
Trigger: GCGGGCCTGGGCGACCTGCCACTTATGCCTTTCTCT...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCCCTCTGGGCCTGCTCTaGCCATATTCCCGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGPLGLL*PYSRVH
Trigger: ATGGACTCGGGAATATGGCCAGAGCAGGCCCAGAGG...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCACCCATTGGTGGTCAGTaGAGCAGGGAGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAPIGGQ*SRELSS
Trigger: AGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGG...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGGTGGACCCCGGCCATaGAGGGCGCTCCCCAACCAA +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVGGPRP*RALPNQ
Trigger: TTGGTTGGGGAGCGCCCTGCATGGCCGGGGTCCACC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCATGCGCTTGAGGATCTaGCAGGGTTGCGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSMRLRI*QGCGCE
Trigger: CTCGCACCCGCAACCCTGCCAGATCCTCAAGCGCAT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCCTGGCTGGATCATGGTaGCTGTGGCTACAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCLAGSW*LWLQLL
Trigger: CAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAG...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp GGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTaGCCACATTCCATGTTTCCCAGTACTGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPLGEWLGVWDS*PHSMFPSTGAW
Trigger: CCAGGCTCCAGTACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCGTCACTGCTCCACGGTaGGCTTGGGGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLVTAPR*AWGRER
Trigger: CCTTTCTCTTCCCCAAGCTCACCGTGGAGCAGTGAC...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAACCAGCCCAGTCCAGTaGCCATTTTTCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAATSPVQ*PFFQAP
Trigger: TGGAGCTTGGAAAAATGGTCACTGGACTGGGCTGGT...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGGGAGAGGGATGTCCTaGTGGGTCTGGGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGGRGMS*WVWVPS
Trigger: GCTGGGTACCCAGACCCATCAGGACATCCCTCTCCC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCGTGTGGCACACGCTCTaGAGAAAGGAGAAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGVWHTL*RKEKGS
Trigger: TGACCCTTTCTCCTTTCTGCAGAGCGTGTGCCACAC...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCACAATCCTTCCCCCTTaGCAGCTACCCAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSTILPP*QLPRRV
Trigger: GACTCGCCTGGGTAGCTGGCAAGGGGGAAGGATTGT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTTGTGCCTCTGGGCCTaGTCTGGCCATATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSLCLWA*SGHIPE
Trigger: CTCGGGAATATGGCCAGAGCAGGCCCAGAGGCACAA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPSIISP*LWGKAS
Trigger: GCTGGCCTTCCCCCAGAGCCAGGGCGAAATGATGGA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAGCCACATGGTCCAGTaGAGTGGCCACATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRSHMVQ*SGHMKA
Trigger: AGCCTTCATGTGGCCACTCCACTGGACCATGTGGCT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAAAATCCCCAGCCACATaGTCCAGTGGAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPKSPAT*SSGVAT
Trigger: TGTGGCCACTCCACTGGACCATGTGGCTGGGGATTT...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCTGTGAAACCTCTGACTaGTGTGCAGCCAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSCETSD*CAASTA
Trigger: TGCAGTACTGGCTGCACACCAGTCAGAGGTTTCACA...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTCCTGGCGGATCACTTaGATCTGCTTCTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSWRIT*ICFSNS
Trigger: CGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGCCAACTGCAGCTCCTaGCGGATCACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSANCSS*RITWIC
Trigger: GCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCGTGGCGCACTATGCTaGGCACTGGGATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSRGALC*ALGCAG
Trigger: TCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGGAGTAGGAAGTCGGTaGTATTCCAGTCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRGVGSR*YSSLPG
Trigger: GCCAGGAAGACTGGAATATCACCGACTTCCTACTCC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTTTTTCCATGAGCAATaGGCCCTAAGGGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCFFHEQ*ALRAGL
Trigger: AAGGCCTGCCCTTAGGGCTCATTGCTCATGGAAAAA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAACCAGCCCAGTCCAGTaGCCATTTTTCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRTSPVQ*PFFQAP
Trigger: TGGAGCTTGGAAAAATGGTCACTGGACTGGGCTGGT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGATCTTCTCACCTACCATaGCAGCAGCCAAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRSSHLP*QQPSSL
Trigger: CAGCGAACTTGGCTGCTGTCATGGTAGGTGAGAAGA...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGTGTGGCACACGCTCTaGAGAAAGGAGAAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDVWHTL*RKEKGS
Trigger: TGACCCTTTCTCCTTTCTGCAGAGCGTGTGCCACAC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCTTTTCCAGCTGGACCTaGAGGAAACTTAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSFSSWT*RKLRRS
Trigger: GGACCTTCTAAGTTTCCTGCAGGTCCAGCTGGAAAA...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTTGTGCCTCTGGGCCTaGTCTGGCCATATTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPLCLWA*SGHIPE
Trigger: CTCGGGAATATGGCCAGAGCAGGCCCAGAGGCACAA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCCATAGTCCTCAGCACTaGTTTCCCGGACAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCHSPQH*FPGQFQ
Trigger: TTGGAACTGTCCGGGAAAGCAGTGCTGAGGACTATG...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCCAGGCCCGCCTCGATaGCCATCACTACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNPGPPR*PSLLPK
Trigger: CTTTGGAAGTAGTGATGGCCATCGAGGCGGGCCTGG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGSIISP*LWGKAS
Trigger: GCTGGCCTTCCCCCAGAGCCAGGGCGAAATGATGGA...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGTTCTGGCTGGATCATaGTGGCTGTGGCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSVLAGS*WLWLQL
Trigger: GAGCTGTAGCCACAGCCACCATGATCCAGCCAGAAC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGTACTCATGCATCTCTaGGAAGCTCTGCCGTACATA +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSVLMHL*EALPYI
Trigger: TATGTACGGCAGAGCTTCCCAGAGATGCATGAGTAC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACATACCATGAGCTGCTaGGGTCCCATGTTGGACCTA +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPHTMSC*GPMLDL
Trigger: TAGGTCCAACATGGGACCCCAGCAGCTCATGGTATG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCGTCTGGGTACCCAGCTaGTTTTGTCCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGVWVPS*FCPSSS
Trigger: TGATGAGGAAGGACAAAACCAGCTGGGTACCCAGAC...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACTGCTTTCCCATTGGTaGTCAGTGAAGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRLLSHW*SVKQGA
Trigger: AGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCAGTCTGCTTTCCCATTaGTGGTCAGTGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSLLSH*WSVKQG
Trigger: TCCCTGCTTCACTGACCACCAATGGGAAAGCAGACT...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGCCAACTGCAGCTCCTaGCGGATCACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNANCSS*RITWIC
Trigger: GCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp TGTACGGCAGGAGCATGGCTGTCGCTGTCGTGTGAATaGAGGTACACTATACATCGGCCTTGCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CTAGAWLSLSCE*RYTIHRPCRLN
Trigger: GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAGCCATGCTCCTGCCGTACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTaGGAGCGGAGCAGTTGCACACACACGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQF*ERSSCTHTEMK
Trigger: CTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCATTTTTCCATGAGCAATaGGCCCTAAGGGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPFFHEQ*ALRAGL
Trigger: AAGGCCTGCCCTTAGGGCTCATTGCTCATGGAAAAA...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCATATTCCCGAGTCCATaGCAATCCTTCCCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSIFPSP*QSFPLA
Trigger: GGCAAGGGGGAAGGATTGTCATGGACTCGGGAATAT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGSGVAT*RLQWEL
Trigger: CAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACT...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAAGTTCCGAGCTACATTaGGGGAGTCTGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPSSELH*GSLLSH
Trigger: ATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACT...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTGCAACAGACAGACCCTaGTCAGCAGCCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPATDRP*SAATTN
Trigger: GTTTGTGGTGGCTGCTGAGCAGGGTCTGTCTGTTGC...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTGCCGTGGTCCAGGGTTaGAAGTGCACCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILAVVQG*KCTAPT
Trigger: GGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGC...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCACAATCCTTCCCCCTTaGCAGCTACCCAGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSTILPP*QLPRRV
Trigger: GACTCGCCTGGGTAGCTGGCAAGGGGGAAGGATTGT...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCTACATTGAGGGAGTCTaGTTTCCCATTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGYIEGV*FPIGGQ
Trigger: CTGACCACCAATGGGAAAGCAGACTCCCTCAATGTA...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCGGATCATGGTGGCTGTaGCTACAGCTCTTGCAACCA +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLGSWWL*LQLLQP
Trigger: TGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCC...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAGAGCAAGTTCTGGCTaGATCATGGTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSRASSG*IMVAVA
Trigger: AGCCACAGCCACCATGATCCAGCCAGAACTTGCTCT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCTGGGTTTTGTGCCTCTaGGCCTGCTCTGGCCATATT +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLWVLCL*ACSGHI
Trigger: AATATGGCCAGAGCAGGCCCAGAGGCACAAAACCCA...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACAGCCACATGGTCCAGTaGAGTGGCCACATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNSHMVQ*SGHMKA
Trigger: AGCCTTCATGTGGCCACTCCACTGGACCATGTGGCT...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTAAATCCCCAGCCACATaGTCCAGTGGAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPKSPAT*SSGVAT
Trigger: TGTGGCCACTCCACTGGACCATGTGGCTGGGGATTT...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCGCACTCCATCAGGGGTaGCTGGTACATTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLALHQG*LVHCTF
Trigger: GAAGGTACAATGTACCAGCCACCCCTGATGGAGTGC...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCTGCCATAGCCTTCAATaGCAAATGGCTTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGCHSLQ*QMAFLR
Trigger: CCGTAGGAAAGCCATTTGCCATTGAAGGCTATGGCA...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCATGTGAAACCTCTGACTaGTGTGCAGCCAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPCETSD*CAASTA
Trigger: TGCAGTACTGGCTGCACACCAGTCAGAGGTTTCACA...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGAGCTCTCTTCTCCTTaGAGGGAGAGGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNELSSP*RERDVL
Trigger: CAGGACATCCCTCTCCCTCCAAGGAGAAGAGAGCTC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp AATTCATGCTTGAAGTGCTTACTGTGCCAGGCCCCCTaGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: NSCLKCLLCQAP*ENGLECGTVCH
Trigger: GTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCACAGTAAGCACTTCAAGCATGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAGTCACTGCTCCACGGTaGGCTTGGGGAAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQVTAPR*AWGRER
Trigger: CCTTTCTCTTCCCCAAGCTCACCGTGGAGCAGTGAC...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTCATGGTCAGGATTaGGACAGTGACATCAGCATC +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPVHGQD*DSDISI
Trigger: GATGCTGATGTCACTGTCTCAATCCTGACCATGAAC...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGGAGTAGGAAGTCGGTaGTATTCCAGTCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNGVGSR*YSSLPG
Trigger: GCCAGGAAGACTGGAATATCACCGACTTCCTACTCC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAAGTTGTTTTCTGAGCTaGCGATGGTGGATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAASCFLS*RWWIPL
Trigger: TAAAGGGATCCACCATCGTCAGCTCAGAAAACAACT...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCAGTTGTTTTCTGAGCTaGCGATGGTGGATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCSCFLS*RWWIPL
Trigger: TAAAGGGATCCACCATCGTCAGCTCAGAAAACAACT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAAGGAGAAAGGGTCACTaGTCCACGGTGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVRRKGH*STVSLG
Trigger: CCCCAAGCTCACCGTGGAGCAGTGACCCTTTCTCCT...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCTGTGGCTACAGCTCTTaGAACCAACTCCATGGCATC +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLCGYSS*NQLHGI
Trigger: GATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACA...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGTTCCAGTAGATCAATaGAATACCCATAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSVPVDQ*NTHSST
Trigger: AGTGCTGCTATGGGTATTGCATTGATCTACTGGAAC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCGAGTCCTCACTAAGATaGCCAAACTGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGESSLR*PNWLRR
Trigger: TCTTCTCAACCAGTTTGGGCATCTTAGTGAGGACTC...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCCATAGTCCTCAGCACTaGTTTCCCGGACAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSHSPQH*FPGQFQ
Trigger: TTGGAACTGTCCGGGAAAGCAGTGCTGAGGACTATG...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACTTCTCATGTACTCATaGATCTCTGGGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPLLMYS*ISGKLC
Trigger: GCAGAGCTTCCCAGAGATGCATGAGTACATGAGAAG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACTTCTCATGTACTCATaGATCTCTGGGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRLLMYS*ISGKLC
Trigger: GCAGAGCTTCCCAGAGATGCATGAGTACATGAGAAG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTCATTCTTCAGGTACTaGACTCCATCAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSSFFRY*TPSGVA
Trigger: AGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCACTACGGTCAGAAGCTTaGAGTCAGCATCTATTGACA +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAALRSEA*SQHLLT
Trigger: TGTCAATAGATGCTGACTGCAAGCTTCTGACCGTAG...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTGGGAGGGAGACCAATaGCATAGCCTTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSWEGDQ*HSLQWQ
Trigger: TTGCCATTGAAGGCTATGGCATTGGTCTCCCTCCCA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTGCTTGATGCCCATTTaGAAAGTCTCAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGCLMPI*KVSVTA
Trigger: TGCTGTCACTGAGACTTTGCAAATGGGCATCAAGCA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCCACTATGCTGAGCACTaGGATGTGCAGGACAGAACT +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLHYAEH*DVQDRT
Trigger: AGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTG...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCCACTATGCTGAGCACTaGGATGTGCAGGACAGAACT +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSHYAEH*DVQDRT
Trigger: AGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTG...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGGATCATGGTGGCTGTaGCTACAGCTCTTGCAACCA +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNGSWWL*LQLLQP
Trigger: TGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCAAGGAGAGCAAGTTCTaGCTGGATCATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLKESKF*LDHGGC
Trigger: ACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTT...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAACCTCTGGGCCTGCTCTaGCCATATTCCCGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQPLGLL*PYSRVH
Trigger: ATGGACTCGGGAATATGGCCAGAGCAGGCCCAGAGG...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTCATGGTCCAGTGGAGTaGCCACATGAAGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPHGPVE*PHEGSN
Trigger: ATTGGAGCCTTCATGTGGCCACTCCACTGGACCATG...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAGTCTGCTTTCCCATTaGTGGTCAGTGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSSLLSH*WSVKQG
Trigger: TCCCTGCTTCACTGACCACCAATGGGAAAGCAGACT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTCCTGGCGGATCACTTaGATCTGCTTCTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNSWRIT*ICFSNS
Trigger: CGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCATACCATGAGCTGCTaGGGTCCCATGTTGGACCTC +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSHTMSC*GPMLDL
Trigger: GAGGTCCAACATGGGACCCCAGCAGCTCATGGTATG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076674.4
CDS-3UTR TCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTCAGGATTGAGACAGTaGCATCAGCATCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCSGLRQ*HQHQNL
Trigger: TAAGTTCTGATGCTGATGTCACTGTCTCAATCCTGA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCATATTCCCGAGTCCATaGCAATCCTTCCCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGIFPSP*QSFPLA
Trigger: GGCAAGGGGGAAGGATTGTCATGGACTCGGGAATAT...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAGAAGAAAGGGCTGGTaGAATCTATCACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRRRKGW*NLSLGF
Trigger: GAAGCCAAGTGATAGATTTCACCAGCCCTTTCTTCT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAGCAGTCAGCATCTATTaGCACTTCATAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAAVSIY*HFIIQK
Trigger: CTTCTGGATTATGAAGTGTCAATAGATGCTGACTGC...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAACCCATTGGTGGTCAGTaGAGCAGGGAGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQPIGGQ*SRELSS
Trigger: AGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGG...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTAGTTCCGAGCTACATTaGGGGAGTCTGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPSSELH*GSLLSH
Trigger: ATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACT...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCTGAGCACTGGGATGTaGAGGACAGAACTGACCAAG +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSLSTGM*RTELTK
Trigger: CTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGAGTCCTCACTAAGATaGCCAAACTGGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRESSLR*PNWLRR
Trigger: TCTTCTCAACCAGTTTGGGCATCTTAGTGAGGACTC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTCATTCTTCAGGTACTaGACTCCATCAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPSFFRY*TPSGVA
Trigger: AGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTGGGAGGGAGACCAATaGCATAGCCTTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNWEGDQ*HSLQWQ
Trigger: TTGCCATTGAAGGCTATGGCATTGGTCTCCCTCCCA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTATTTCGCCCTGGCTCTaGGGGAAGGCCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILISPWL*GKASSA
Trigger: AGCGCTGCTGGCCTTCCCCCAGAGCCAGGGCGAAAT...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTAAGGAGAGCAAGTTCTaGCTGGATCATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPKESKF*LDHGGC
Trigger: ACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTT...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTGCAGTTCATTGTGCTaGGAAGGAGAGCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSCSSLC*EGEQVL
Trigger: CAGAACTTGCTCTCCTTCCCAGCACAATGAACTGCA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCTGCTTTCCCATTGGTaGTCAGTGAAGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSLLSHW*SVKQGA
Trigger: AGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCGTGGCGCACTATGCTaGGCACTGGGATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILRGALC*ALGCAG
Trigger: TCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGTTCATGGTCAGGATTaGGACAGTGACATCAGCATC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNVHGQD*DSDISI
Trigger: GATGCTGATGTCACTGTCTCAATCCTGACCATGAAC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATTTTCGTTGGTTGTCGTaGCTCAGATTGGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDFRWLS*LRLEVF
Trigger: GAATACTTCCAATCTGAGTCACGACAACCAACGAAA...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACTGAGCACTGGGATGTaGAGGACAGAACTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVLSTGM*RTELTK
Trigger: CTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCTGTGGCTACAGCTCTTaGAACCAACTCCATGGCATC +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGCGYSS*NQLHGI
Trigger: GATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACA...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACCCATAGGGTCATACTaGAAGTTCCAGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VDSSKPALFLLLLAASWPPIGSY*KFQMKK
Trigger: CTTTTTCATCTGGAACTTGCAGTATGACCCTATGGG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCAAGAGTCCAGAGAAATaGTTGATGCCCATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCKSPEK*LMPICK
Trigger: TTTGCAAATGGGCATCAAGCATTTCTCTGGACTCTT...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGTGTGCAGCCAGTACTaGAGCTTGGATTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSVCSQY*SLDLFL
Trigger: CAAAAACAAATCCAAGCTGCAGTACTGGCTGCACAC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGTCTTGGAACATGGCTaGTTTTCTTCTACAAATGAT +
Preference number: 4 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSVLEHG*FSSTND
Trigger: ATCATTTGTAGAAGAAAAGCAGCCATGTTCCAAGAC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGATCCATCTTCTCCATCTaGTCTTTTCCACACGTTTTG +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRSIFSI*SFPHVL
Trigger: CAAAACGTGTGGAAAAGAGCAGATGGAGAAGATGGA...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGACTAATGTTTTCCAGCTaGACCTGCAGGAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRLMFSS*TCRKLR
Trigger: TCTAAGTTTCCTGCAGGTCCAGCTGGAAAACATTAG...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAAGAGCAAGTTCTGGCTaGATCATGGTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVRASSG*IMVAVA
Trigger: AGCCACAGCCACCATGATCCAGCCAGAACTTGCTCT...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATGGGTTTTGTGCCTCTaGGCCTGCTCTGGCCATATT +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQWVLCL*ACSGHI
Trigger: AATATGGCCAGAGCAGGCCCAGAGGCACAAAACCCA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGCACTCCATCAGGGGTaGCTGGTACATTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVALHQG*LVHCTF
Trigger: GAAGGTACAATGTACCAGCCACCCCTGATGGAGTGC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTGCCATAGCCTTCAATaGCAAATGGCTTTCCTACGG +
Preference number: 4 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPCHSLQ*QMAFLR
Trigger: CCGTAGGAAAGCCATTTGCCATTGAAGGCTATGGCA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCCTATGTGTTCACCAATaGTTGTCAGGATGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLLCVHQ*LSGWRD
Trigger: GTCTCTCCATCCTGACAACCATTGGTGAACACATAG...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGCTGGGGTCCCATGTTaGACCTCTTTTCCACACGTT +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVAGVPC*TSFPHV
Trigger: AACGTGTGGAAAAGAGGTCCAACATGGGACCCCAGC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076674.4
3UTR CAA 72 bp GGGTGGGAGATGGTGAAGCAGGGTAGACTCCGGTATTaGACATTTATGATGGTCTCTGGTTGCTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GWEMVKQGRLRY*TFMMVSGCFWD
Trigger: ATCCCAGAAGCAACCAGAGACCATCATAAATGTCAAATACCGGAGTCTACCCTGCTTCACCATCTCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCTCAGGATTGAGACAGTaGCATCAGCATCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLSGLRQ*HQHQNL
Trigger: TAAGTTCTGATGCTGATGTCACTGTCTCAATCCTGA...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTGTAACTTGTTTGGGTaGTGGAAGTGGGTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNCNLFG*WKWVLC
Trigger: GCACAAAACCCACTTCCATCACCCAAACAAGTTACA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCATCTACTTCTCTCGTaGAAACAAATGGATGTTCAA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGHLLLS*KQMDVQ
Trigger: TTGAACATCCATTTGTTTTCACGAGAGAAGTAGATG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGCAGACATTCAAGGCTaGGGAGAAGGAGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGADIQG*GEGEDF
Trigger: AAAGTCTTCTCCTTCTCCTCAGCCTTGAATGTCTGC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCTTGTACCACTTGTCATaGAGCACATCCATAAACCCA +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSLYHLS*STSINP
Trigger: TGGGTTTATGGATGTGCTTCATGACAAGTGGTACAA...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTATCACTTGGCTTCTTaGAGTATTGATGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGYHLAS*SIDAER
Trigger: TCTTTCAGCATCAATACTGCAAGAAGCCAAGTGATA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCGTCTTGGAACATGGCTaGTTTTCTTCTACAAATGAT +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGVLEHG*FSSTND
Trigger: ATCATTTGTAGAAGAAAAGCAGCCATGTTCCAAGAC...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAAGTCCCCTTCTGTCTTaGAGGTCCATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVSPLLS*RSIFSI
Trigger: GATGGAGAAGATGGACCTGCAAGACAGAAGGGGACT...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTACATTGAGGGAGTCTaGTTTCCCATTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSYIEGV*FPIGGQ
Trigger: CTGACCACCAATGGGAAAGCAGACTCCCTCAATGTA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTGCAGTTCATTGTGCTaGGAAGGAGAGCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSCSSLC*EGEQVL
Trigger: CAGAACTTGCTCTCCTTCCCAGCACAATGAACTGCA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTCTCGTGAAAACAAATaGATGTTCAATCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSRENK*MFNQCH
Trigger: GTGACACTGATTGAACATCCATTTGTTTTCACGAGA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCATCTCGTGAAAACAAATaGATGTTCAATCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAASRENK*MFNQCH
Trigger: GTGACACTGATTGAACATCCATTTGTTTTCACGAGA...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCGTGAAATCTATCACTTaGCTTCTTGCAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGVKSIT*LLAVLM
Trigger: CATCAATACTGCAAGAAGCCAAGTGATAGATTTCAC...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGTACTCATGCATCTCTaGGAAGCTCTGCCGTACATA +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGVLMHL*EALPYI
Trigger: TATGTACGGCAGAGCTTCCCAGAGATGCATGAGTAC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAGTCTGGGTACCCAGCTaGTTTTGTCCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQVWVPS*FCPSSS
Trigger: TGATGAGGAAGGACAAAACCAGCTGGGTACCCAGAC...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp AAAGCAGAAATACTTTTGTGGCACCAGGTGAAAAGGTaGACAGGAGCCAGAGTTGTCTGGCAGCTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: KAEILLWHQVKR*TGARVVWQLAD
Trigger: ATCGGCAAGCTGCCAGACAACTCTGGCTCCTGTCAACCTTTTCACCTGGTGCCACAAAAGTATTTCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp CTGGCCCAGGGCTTTATTTTAAAAGCACCCTGTGCTTaGTTGGTGTCCCATCAGCATGTTCCTACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LAQGFILKAPCA*LVSHQHVPTQG
Trigger: ACCTTGAGTAGGAACATGCTGATGGGACACCAACAAAGCACAGGGTGCTTTTAAAATAAAGCCCTGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCAGAAGAAAGGGCTGGTaGAATCTATCACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGRRKGW*NLSLGF
Trigger: GAAGCCAAGTGATAGATTTCACCAGCCCTTTCTTCT...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTTTGCAAAGTCTCAGTaGCAGCAAAGCTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNFAKSQ*QQSFSF
Trigger: GAAAGAGAAGCTTTGCTGTCACTGAGACTTTGCAAA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCTACGGTCAGAAGCTTaGAGTCAGCATCTATTGACA +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSLRSEA*SQHLLT
Trigger: TGTCAATAGATGCTGACTGCAAGCTTCTGACCGTAG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCTAATGTTTTCCAGCTaGACCTGCAGGAAACTTAGA +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNLMFSS*TCRKLR
Trigger: TCTAAGTTTCCTGCAGGTCCAGCTGGAAAACATTAG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACTTGCAACCAACTCCATaGCATCCTGAACATAGTACT +
Preference number: 4 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNLQPTP*HPEHST
Trigger: AGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAA...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCTGGCTGGATCATGGTaGCTGTGGCTACAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLAGSW*LWLQLL
Trigger: CAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATCCATCAGGGGTGGCTaGTACATTGTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQSIRGG*YIVPSH
Trigger: ATGAGAAGGTACAATGTACCAGCCACCCCTGATGGA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCATTTTGTCTTGGAACATaGCTGCTTTTCTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAFCLGT*LLFFYK
Trigger: TTTGTAGAAGAAAAGCAGCCATGTTCCAAGACAAAA...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATGTAACTTGTTTGGGTaGTGGAAGTGGGTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQCNLFG*WKWVLC
Trigger: GCACAAAACCCACTTCCATCACCCAAACAAGTTACA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCCATCTACTTCTCTCGTaGAAACAAATGGATGTTCAA +
Preference number: 4 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSHLLLS*KQMDVQ
Trigger: TTGAACATCCATTTGTTTTCACGAGAGAAGTAGATG...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTCTTCTCACCTACCATaGCAGCAGCCAAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILSSHLP*QQPSSL
Trigger: CAGCGAACTTGGCTGCTGTCATGGTAGGTGAGAAGA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGCAGTCAGCATCTATTaGCACTTCATAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGAVSIY*HFIIQK
Trigger: CTTCTGGATTATGAAGTGTCAATAGATGCTGACTGC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTTGTACCACTTGTCATaGAGCACATCCATAAACCCA +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSLYHLS*STSINP
Trigger: TGGGTTTATGGATGTGCTTCATGACAAGTGGTACAA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTTTGCAAAGTCTCAGTaGCAGCAAAGCTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSFAKSQ*QQSFSF
Trigger: GAAAGAGAAGCTTTGCTGTCACTGAGACTTTGCAAA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR TCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTTTCGTTGGTTGTCGTaGCTCAGATTGGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSFRWLS*LRLEVF
Trigger: GAATACTTCCAATCTGAGTCACGACAACCAACGAAA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCCCCATAGGGTCATACTaGAAGTTCCAGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGPIGSY*KFQMKK
Trigger: CTTTTTCATCTGGAACTTGCAGTATGACCCTATGGG...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGTTCCAGTAGATCAATaGAATACCCATAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGVPVDQ*NTHSST
Trigger: AGTGCTGCTATGGGTATTGCATTGATCTACTGGAAC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATGCTTGATGCCCATTTaGAAAGTCTCAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQCLMPI*KVSVTA
Trigger: TGCTGTCACTGAGACTTTGCAAATGGGCATCAAGCA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCATGGTCCAGTGGAGTaGCCACATGAAGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILHGPVE*PHEGSN
Trigger: ATTGGAGCCTTCATGTGGCCACTCCACTGGACCATG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTTTTCCAGCTGGACCTaGAGGAAACTTAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILFSSWT*RKLRRS
Trigger: GGACCTTCTAAGTTTCCTGCAGGTCCAGCTGGAAAA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAAAGAGTCCAGAGAAATaGTTGATGCCCATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LENGLECGTVCHIPCFPVKSPEK*LMPICK
Trigger: TTTGCAAATGGGCATCAAGCATTTCTCTGGACTCTT...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGTGAAATCTATCACTTaGCTTCTTGCAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGVKSIT*LLAVLM
Trigger: CATCAATACTGCAAGAAGCCAAGTGATAGATTTCAC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp TCTTTGGCTATCCAGCCCGTTCTAACTTGCTTTTATTaGCTGGAGGGATACTCTCCTCTTGTGGCAAATACT +
Preference number: 4 (lower is better)
Translates to: SLAIQPVLTCFY*LEGYSPLVANT
Trigger: AGTATTTGCCACAAGAGGAGAGTATCCCTCCAGCAAATAAAAGCAAGTTAGAACGGGCTGGATAGCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTGTGTGCAGCCAGTACTaGAGCTTGGATTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILVCSQY*SLDLFL
Trigger: CAAAAACAAATCCAAGCTGCAGTACTGGCTGCACAC...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTTTTGTCTTGGAACATaGCTGCTTTTCTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSFCLGT*LLFFYK
Trigger: TTTGTAGAAGAAAAGCAGCCATGTTCCAAGACAAAA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp TCTTGCACTCCCAGGTTTACTCCTCCATTTAACTCCTaGCTCAAGTGTTCTGATTACAACTTAGGGCACTAT +
Preference number: 4 (lower is better)
Translates to: SCTPRFTPPFNS*LKCSDYNLGHY
Trigger: ATAGTGCCCTAAGTTGTAATCAGAACACTTGAGCAAGGAGTTAAATGGAGGAGTAAACCTGGGAGTGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTTGCAACCAACTCCATaGCATCCTGAACATAGTACT +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLQPTP*HPEHST
Trigger: AGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR GCA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTATCACTTGGCTTCTTaGAGTATTGATGCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HGNEDAGQILFTDLKEILYHLAS*SIDAER
Trigger: TCTTTCAGCATCAATACTGCAAGAAGCCAAGTGATA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
3UTR CAA 72 bp TATAGGTTTAGAAGGACTCTCCCTTTCGTGAAATCTTaGTACAAAACACAGCACACTGTTTCACAAATTGCA +
Preference number: 4 (lower is better)
Translates to: YRFRRTLPFVKS*YKTQHTVSQIA
Trigger: TGCAATTTGTGAAACAGTGTGCTGTGTTTTGTACAAAGATTTCACGAAAGGGAGAGTCCTTCTAAACCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp CCGCCCTGCCGCCGTCCTGAGCGCGACTGGCTGCGCGTGGGGCCGTaGTCCAGGGTTGCAAGTGCACCGCGCCCACCCTCACCGCGTGTC +
Preference number: 5 (lower is better)
Translates to: PPCRRPERDWLRVGP*SRVASAPRPPSPRV
Trigger: GACACGCGGTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp CTGGGCACCCGCCCTGCCGCCGTCCTGAGCGCGACTGGCTGCGCGTaGGGCCGTGGTCCAGGGTTGCAAGTGCACCGCGCCCACCCTCAC +
Preference number: 5 (lower is better)
Translates to: LGTRPAAVLSATGCA*GRGPGLQVHRAHPH
Trigger: GTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp ATCCCTCTGGGCACCCGCCCTGCCGCCGTCCTGAGCGCGACTGGCTaGGCGTGGGGCCGTGGTCCAGGGTTGCAAGTGCACCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: IPLGTRPAAVLSATG*AWGRGPGLQVHRAH
Trigger: GTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGAGGGAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp GCTCATCCCTCTGGGCACCCGCCCTGCCGCCGTCCTGAGCGCGACTaGCTGCGCGTGGGGCCGTGGTCCAGGGTTGCAAGTGCACCGCGC +
Preference number: 5 (lower is better)
Translates to: AHPSGHPPCRRPERD*LRVGPWSRVASAPR
Trigger: GCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGAGGGATGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp CCCGACTCTGGCTCATCCCTCTGGGCACCCGCCCTGCCGCCGTCCTaGGCGCGACTGGCTGCGCGTGGGGCCGTGGTCCAGGGTTGCAAG +
Preference number: 5 (lower is better)
Translates to: PDSGSSLWAPALPPS*ARLAARGAVVQGCK
Trigger: CTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGAGGGATGAGCCAGAGTCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TGCACCGCGCCCACCCTCACCGCGTGTCCGATGCGCTTGAGGATCTaGCAGGGTTGCGGGTGCGAGGAGGAGCTGGGCACCCCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CTAPTLTACPMRLRI*QGCGCEEELGTPAS
Trigger: GCTGGCCGGGGTGCCCAGCTCCTCCTCGCACCCGCAACCCTGCCAGATCCTCAAGCGCATCGGACACGCGGTGAGGGTGGGCGCGGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGGCCGTGGTCCAGGGTaGCAAGTGCACCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRGRGPG*QVHRAH
Trigger: GTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp GTGGCACACGCTCTGCAGAAAGGAGAAAGGGTCACTGCTCCACGGTaGGCTTGGGGAAGAGAAAGGCATAAGTGGCAGGTCGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: VAHALQKGERVTAPR*AWGRERHKWQVAQA
Trigger: GGCCTGGGCGACCTGCCACTTATGCCTTTCTCTTCCCCAAGCTCACCGTGGAGCAGTGACCCTTTCTCCTTTCTGCAGAGCGTGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TGGGGGAAGGCCAGCAGCGCTGAAACCCCTTGTACCACTACGGTGTaGCACACGCTCTGCAGAAAGGAGAAAGGGTCACTGCTCCACGGT +
Preference number: 5 (lower is better)
Translates to: WGKASSAETPCTTTV*HTLCRKEKGSLLHG
Trigger: ACCGTGGAGCAGTGACCCTTTCTCCTTTCTGCAGAGCGTGTGCCACACCGTAGTGGTACAAGGGGTTTCAGCGCTGCTGGCCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGAGGATCTGGCAGGGTaGCGGGTGCGAGGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDEDLAG*RVRGGA
Trigger: AGCTCCTCCTCGCACCCGCAACCCTGCCAGATCCTC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCCAACCAACGTGCGCCTaGCGAGGGCGCCGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSQPTCA*RGRRWP
Trigger: CGGCCACCGGCGCCCTCGCAAGGCGCACGTTGGTTG...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp CTCTCCCGCGGAAACTCGTGGCGCACTATGCTGAGCACTGGGATGTaGAGGACAGAACTGACCAAGTCCAGCTCCATCATTTCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LSRGNSWRTMLSTGM*RTELTKSSSIISPW
Trigger: CCAGGGCGAAATGATGGAGCTGGACTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACGAGTTTCCGCGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp AGGACAGAACTGACCAAGTCCAGCTCCATCATTTCGCCCTGGCTCTaGGGGAAGGCCAGCAGCGCTGAAACCCCTTGTACCACTACGGTG +
Preference number: 5 (lower is better)
Translates to: RTELTKSSSIISPWL*GKASSAETPCTTTV
Trigger: CACCGTAGTGGTACAAGGGGTTTCAGCGCTGCTGGCCTTCCCCCAGAGCCAGGGCGAAATGATGGAGCTGGACTTGGTCAGTTCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCGGCCGTGGTCCAGGGTaGCAAGTGCACCGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSGRGPG*QVHRAH
Trigger: GTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCC...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp AGCAGCGCTGAAACCCCTTGTACCACTACGGTGTGGCACACGCTCTaGAGAAAGGAGAAAGGGTCACTGCTCCACGGTGAGCTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: SSAETPCTTTVWHTL*RKEKGSLLHGELGE
Trigger: TTCCCCAAGCTCACCGTGGAGCAGTGACCCTTTCTCCTTTCTGCAGAGCGTGTGCCACACCGTAGTGGTACAAGGGGTTTCAGCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp GCCTGCTCTGGCCATATTCCCGAGTCCATGACAATCCTTCCCCCTTaGCAGCTACCCAGGCGAGTCCACATTGGCTTTCCCATAGGGTCA +
Preference number: 5 (lower is better)
Translates to: ACSGHIPESMTILPP*QLPRRVHIGFPIGS
Trigger: TGACCCTATGGGAAAGCCAATGTGGACTCGCCTGGGTAGCTGGCAAGGGGGAAGGATTGTCATGGACTCGGGAATATGGCCAGAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp ATGTGCAGGACAGAACTGACCAAGTCCAGCTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCCAGCAGCGCTGAAACCCCTTGTACCACT +
Preference number: 5 (lower is better)
Translates to: MCRTELTKSSSIISP*LWGKASSAETPCTT
Trigger: AGTGGTACAAGGGGTTTCAGCGCTGCTGGCCTTCCCCCAGAGCCAGGGCGAAATGATGGAGCTGGACTTGGTCAGTTCTGTCCTGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTGAGGATCTGGCAGGGTaGCGGGTGCGAGGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPEDLAG*RVRGGA
Trigger: AGCTCCTCCTCGCACCCGCAACCCTGCCAGATCCTC...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp GAGCCACGAAAATCCCCAGCCACATGGTCCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTGCTGTGTCTCGAGTCCTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: EPRKSPATWSSGVAT*RLQWELLCLESSLR
Trigger: TCTTAGTGAGGACTCGAGACACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACCATGTGGCTGGGGATTTTCGTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp TTCCTGCTTACGGCCAACTGCAGCTCCTGGCGGATCACTTGGATCTaGTTCTCCAACTCGGAGAGTTCCTGCATCACGGAGTTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: FLLTANCSSWRITWI*FSNSESSCITEFRA
Trigger: AGCTCGGAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCGAAGTGACTGCCATGTaGGCTGTTCCACTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSEVTAM*AVPLRR
Trigger: TCTCCTGAGTGGAACAGCCAACATGGCAGTCACTTC...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGAGGTCAACGGAGAGTaGGGAGGGAGACCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDEVNGE*GGRPMP
Trigger: TGGCATTGGTCTCCCTCCCAACTCTCCGTTGACCTC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp GTTCCGAGCTACATTGAGGGAGTCTGCTTTCCCATTGGTGGTCAGTaGAGCAGGGAGCTCTCTTCTCCTTGGAGGGAGAGGGATGTCCTG +
Preference number: 5 (lower is better)
Translates to: VPSYIEGVCFPIGGQ*SRELSSPWRERDVL
Trigger: CAGGACATCCCTCTCCCTCCAAGGAGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp GCAGTGATATGTAGAGCCACGAAAATCCCCAGCCACATGGTCCAGTaGAGTGGCCACATGAAGGCTCCAATGGGAGCTGCTGTGTCTCGA +
Preference number: 5 (lower is better)
Translates to: AVICRATKIPSHMVQ*SGHMKAPMGAAVSR
Trigger: TCGAGACACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACCATGTGGCTGGGGATTTTCGTGGCTCTACATATCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TCTGTCTTCCTGCTTACGGCCAACTGCAGCTCCTGGCGGATCACTTaGATCTGCTTCTCCAACTCGGAGAGTTCCTGCATCACGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SVFLLTANCSSWRIT*ICFSNSESSCITEF
Trigger: GAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TACTCCTCAAGCTCTGTCTTCCTGCTTACGGCCAACTGCAGCTCCTaGCGGATCACTTGGATCTGCTTCTCCAACTCGGAGAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: YSSSSVFLLTANCSS*RITWICFSNSESSC
Trigger: GCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGAGCTTGAGGAGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCCTGTGGCTACAGCTCTaGCAACCAACTCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGLWLQL*QPTPWH
Trigger: ATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAG...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCCAGGCCCCCTTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCTGTGTTCACCAATGGTaGTCAGGATGGAGAGACCGA +
Preference number: 5 (lower is better)
Translates to: VPGPLGEWLGVWDSLPHSCVHQW*SGWRDR
Trigger: TCGGTCTCTCCATCCTGACAACCATTGGTGAACACA...GGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAAGGGGGCCTGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGAGTCTGCTTTCCCATaGGTGGTCAGTGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: VDSSKPALFLLLLAASWPESAFP*VVSEAG
Trigger: CCCTGCTTCACTGACCACCAATGGGAAAGCAGACTC...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACTCCTGGCGGATCACTaGGATCTGCTTCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: VDSSKPALFLLLLAASWPLLADH*DLLLQL
Trigger: GAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp TCTCCAACTCGGAGAGTTCCTGCATCACGGAGTTCCGAGCTACATTaGGGGAGTCTGCTTTCCCATTGGTGGTCAGTGAAGCAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPTRRVPASRSSELH*GSLLSHWWSVKQGA
Trigger: AGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp TCCTGGCGGATCACTTGGATCTGCTTCTCCAACTCGGAGAGTTCCTaGATCACGGAGTTCCGAGCTACATTGAGGGAGTCTGCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SWRITWICFSNSESS*ITEFRATLRESAFP
Trigger: TGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp CACAAGTCCGGTTCGTCCTTTGATACTCCTCAAGCTCTGTCTTCCTaGTTACGGCCAACTGCAGCTCCTGGCGGATCACTTGGATCTGCT +
Preference number: 5 (lower is better)
Translates to: HKSGSSFDTPQALSS*LRPTAAPGGSLGSA
Trigger: AGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGAGCTTGAGGAGTATCAAAGGACGAACCGGACTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp ATTCTGACTCTCCCGCGGAAACTCGTGGCGCACTATGCTGAGCACTaGGATGTGCAGGACAGAACTGACCAAGTCCAGCTCCATCATTTC +
Preference number: 5 (lower is better)
Translates to: ILTLPRKLVAHYAEH*DVQDRTDQVQLHHF
Trigger: GAAATGATGGAGCTGGACTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACGAGTTTCCGCGGGAGAGTCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATCAGCATTTAGGGGGTTaGATGGCTGCTGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDQHLGG*MAAVLP
Trigger: TGGCAGAACAGCAGCCATCAAACCCCCTAAATGCTG...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACGAGGTCAACGGAGAGTaGGGAGGGAGACCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNEVNGE*GGRPMP
Trigger: TGGCATTGGTCTCCCTCCCAACTCTCCGTTGACCTC...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTGTGTTCACCAATGGTaGTCAGGATGGAGAGACCGA +
Preference number: 5 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGCVHQW*SGWRDR
Trigger: TCGGTCTCTCCATCCTGACAACCATTGGTGAACACA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp AGTGAAGCAGGGAGCTCTCTTCTCCTTGGAGGGAGAGGGATGTCCTaGTGGGTCTGGGTACCCAGCTGGTTTTGTCCTTCCTCATCATTA +
Preference number: 5 (lower is better)
Translates to: SEAGSSLLLGGRGMS*WVWVPSWFCPSSSL
Trigger: TAATGATGAGGAAGGACAAAACCAGCTGGGTACCCAGACCCATCAGGACATCCCTCTCCCTCCAAGGAGAAGAGAGCTCCCTGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp AGGGGTGGCTGGTACATTGTACCTTCTCATGTACTCATGCATCTCTaGGAAGCTCTGCCGTACATAGTCCTCAGCACTGCTTTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: RGGWYIVPSHVLMHL*EALPYIVLSTAFPD
Trigger: GTCCGGGAAAGCAGTGCTGAGGACTATGTACGGCAGAGCTTCCCAGAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAGTGGATCCCTTTACTTaGATGGAACCACTGAGACCT +
Preference number: 5 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAVDPFT*MEPLRP
Trigger: AGGTCTCAGTGGTTCCATCAAAGTAAAGGGATCCAC...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGGGGTGGCTGGTACATaGTACCTTCTCATGTACTCA +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDGVAGT*YLLMYS
Trigger: TGAGTACATGAGAAGGTACAATGTACCAGCCACCCC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCACCTACGGTCAGAAGCTaGCAGTCAGCATCTATTGAC +
Preference number: 5 (lower is better)
Translates to: VDSSKPALFLLLLAASWPPTVRS*QSASID
Trigger: GTCAATAGATGCTGACTGCAAGCTTCTGACCGTAGG...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATCCTACGGTCAGAAGCTaGCAGTCAGCATCTATTGAC +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDPTVRS*QSASID
Trigger: GTCAATAGATGCTGACTGCAAGCTTCTGACCGTAGG...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTCTCCTGGCGGATCACTaGGATCTGCTTCTCCAACTC +
Preference number: 5 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPLLADH*DLLLQL
Trigger: GAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAG...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TTGTGCTGGGAAGGAGAGCAAGTTCTGGCTGGATCATGGTGGCTGTaGCTACAGCTCTTGCAACCAACTCCATGGCATCCTGAACATAGT +
Preference number: 5 (lower is better)
Translates to: LCWEGEQVLAGSWWL*LQLLQPTPWHPEHS
Trigger: ACTATGTTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTTCCCAGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp AGTTCATTGTGCTGGGAAGGAGAGCAAGTTCTGGCTGGATCATGGTaGCTGTGGCTACAGCTCTTGCAACCAACTCCATGGCATCCTGAA +
Preference number: 5 (lower is better)
Translates to: SSLCWEGEQVLAGSW*LWLQLLQPTPWHPE
Trigger: TTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTTCCCAGCACAATGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCTGTGGCTACAGCTCTaGCAACCAACTCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNLWLQL*QPTPWH
Trigger: ATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTCAGCATTTAGGGGGTTaGATGGCTGCTGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPQHLGG*MAAVLP
Trigger: TGGCAGAACAGCAGCCATCAAACCCCCTAAATGCTG...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCGGGGTGGCTGGTACATaGTACCTTCTCATGTACTCA +
Preference number: 5 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLGVAGT*YLLMYS
Trigger: TGAGTACATGAGAAGGTACAATGTACCAGCCACCCC...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTCTTTTCCACACGTTTaGTCTTGGAACATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSFPHV*SWNMAA
Trigger: AGCAGCCATGTTCCAAGACAAAACGTGTGGAAAAGA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTGCAGTTCTTGGAGCGGAGCAGTTGCACACACACGGAAATGAAGACGCAGGGCTCAAGTGTAACTTGTTaGGGTGATGGAAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: VQFLERSSCTHTEMKTQGSSVTC*GDGSGF
Trigger: AAACCCACTTCCATCACCCAAACAAGTTACACTTGA...GCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGCTCCGCTCCAAGAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTCAAGTGTAACTTGTTaGGGTGATGGAAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCSSVTC*GDGSGF
Trigger: AAACCCACTTCCATCACCCAAACAAGTTACACTTGA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCGAAGTGACTGCCATGTaGGCTGTTCCACTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGEVTAM*AVPLRR
Trigger: TCTCCTGAGTGGAACAGCCAACATGGCAGTCACTTC...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCATGGCTTCTTGCAGTATaGATGCTGAAAGAAGTGACT +
Preference number: 5 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAWLLAV*MLKEVT
Trigger: AGTCACTTCTTTCAGCATCAATACTGCAAGAAGCCA...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCAGTTTGGCGAGAAGGAGAAGACTTaGTTTCTGTTCCTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: AVSLLCSCCCLLRLGQFGEKEKT*FLFLPL
Trigger: TAAAGGGAGGAACAGAAACAAAGTCTTCTCCTTCTC...GCCAAACTGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCATACTGCAGCTTGGATTaGTTTTTGATTCGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: KDFYPGDLGACVGRAAAAYCSLD*FLIRGS
Trigger: GCTACCACGAATCAAAAACAAATCCAAGCTGCAGTA...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GTTGACAGCAGTAAGCCTGCTTTGTTCCTGCTGCTGCTTGCTGCGTCTTGGCCATCTTTTCCACACGTTTaGTCTTGGAACATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VDSSKPALFLLLLAASWPSFPHV*SWNMAA
Trigger: AGCAGCCATGTTCCAAGACAAAACGTGTGGAAAAGA...TGGCCAAGACGCAGCAAGCAGCAGCAGGAACAAAGCAGGCTTACTGCTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGGTACCCAGCTGGTTTaGTCCTTCCTCATCATTAAA +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDGTQLV*SFLIIK
Trigger: TTTAATGATGAGGAAGGACAAAACCAGCTGGGTACC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGAGTCTGCTTTCCCATaGGTGGTCAGTGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LENGLECGTVCHIPCFPVESAFP*VVSEAG
Trigger: CCCTGCTTCACTGACCACCAATGGGAAAGCAGACTC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp GAGGTGATAGCCCAAACTGTGTGGACATTTCAAATATCTGCCGGATaGTCCCCATGTCACAGCCAAACATCACCATTGTGGGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVIAQTVWTFQISAG*SPCHSQTSPLWVCC
Trigger: ACAGCACACCCACAATGGTGATGTTTGGCTGTGACATGGGGAGCATCCGGCAGATATTTGAAATGTCCACACAGTTTGGGCTATCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp GAGAGCAAGTTCTGGCTGGATCATGGTGGCTGTGGCTACAGCTCTTaGAACCAACTCCATGGCATCCTGAACATAGTACTCAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: ESKFWLDHGGCGYSS*NQLHGILNIVLKDR
Trigger: TCTGTCTTTGAGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAACTTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp CATGACAATCCTTCCCCCTTGCCAGCTACCCAGGCGAGTCCACATTaGCTTTCCCATAGGGTCATACTGCAAGTTCCAGATGAAAAAGTT +
Preference number: 5 (lower is better)
Translates to: HDNPSPLPATQASPH*LSHRVILQVPDEKV
Trigger: AACTTTTTCATCTGGAACTTGCAGTATGACCCTATGGGAAAGCCAATGTGGACTCGCCTGGGTAGCTGGCAAGGGGGAAGGATTGTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp GTAGCAGCAGTCTGTACACTATGTGTTCACCAATGGTTGTCAGGATaGAGAGACCGAATCCTATGCACAGCAGCACGAAGAGTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VAAVCTLCVHQWLSG*RDRILCTAARRVQR
Trigger: TCTCTGGACTCTTCGTGCTGCTGTGCATAGGATTCGGTCTCTCCATCCTGACAACCATTGGTGAACACATAGTGTACAGACTGCTGCTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AAAGATTTCTACCCTGGAGACCTGGGGGCGTGTGTGGGAAGAGCTGCTGCTGCAAGCAACAAGCTAAAATaGTACCAGTTGTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: KDFYPGDLGACVGRAAAASNKLK*YQLFMV
Trigger: GACCATGAACAACTGGTACAATTTTAGCTTGTTGCT...TGCAGCAGCAGCTCTTCCCACACACGCCCCCAGGTCTCCAGGGTAGAAATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATTGGCTTCTTGCAGTATaGATGCTGAAAGAAGTGACT +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDWLLAV*MLKEVT
Trigger: AGTCACTTCTTTCAGCATCAATACTGCAAGAAGCCA...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTCCAAAACGAAAACCTaGAGAAGGATGATGAAGCTT +
Preference number: 5 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCSKTKT*RRMMKL
Trigger: AAGCTTCATCATCCTTCTCAAGGTTTTCGTTTTGGA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TGTTCACGCCATGCTCACAAGACAGCGGTGCAGTTCTTGGAGCGGAGCAGTTGCTGCAGTCAGCATCTATaGACACTTCATAATCCAGAA +
Preference number: 5 (lower is better)
Translates to: CSRHAHKTAVQFLERSSCCSQHL*TLHNPE
Trigger: TTCTGGATTATGAAGTGTCAATAGATGCTGACTGCA...GCAACTGCTCCGCTCCAAGAACTGCACCGCTGTCTTGTGAGCATGGCGTGAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACATGCTTGATGCCCATTaGCAAAGTCTCAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNMLDAH*QSLSDS
Trigger: GCTGTCACTGAGACTTTGCAAATGGGCATCAAGCAT...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGAGTCCCCTTCTGTCTaGCAGGTCCATCTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LENGLECGTVCHIPCFPVESPSV*QVHLLH
Trigger: ATGGAGAAGATGGACCTGCAAGACAGAAGGGGACTC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCGGTACCCAGCTGGTTTaGTCCTTCCTCATCATTAAA +
Preference number: 5 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSGTQLV*SFLIIK
Trigger: TTTAATGATGAGGAAGGACAAAACCAGCTGGGTACC...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp ATCACCATTGTGGGTGTGCTGTTCCTAATGTTTTCCAGCTGGACCTaGAGGAAACTTAGAAGGTCCTTTGTGGAGGACAGGTTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ITIVGVLFLMFSSWT*RKLRRSFVEDRLAV
Trigger: CACTGCTAACCTGTCCTCCACAAAGGACCTTCTAAGTTTCCTGCAGGTCCAGCTGGAAAACATTAGGAACAGCACACCCACAATGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp ACTCATGCATCTCTGGGAAGCTCTGCCGTACATAGTCCTCAGCACTaGTTTCCCGGACAGTTCCAAAACGAAAACCTTGAGAAGGATGAT +
Preference number: 5 (lower is better)
Translates to: THASLGSSAVHSPQH*FPGQFQNENLEKDD
Trigger: ATCATCCTTCTCAAGGTTTTCGTTTTGGAACTGTCCGGGAAAGCAGTGCTGAGGACTATGTACGGCAGAGCTTCCCAGAGATGCATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp GAGAGACCGAATCCTATGCACAGCAGCACGAAGAGTCCAGAGAAATaGTTGATGCCCATTTGCAAAGTCTCAGTGACAGCAAAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: ERPNPMHSSTKSPEK*LMPICKVSVTAKLL
Trigger: GAGAAGCTTTGCTGTCACTGAGACTTTGCAAATGGGCATCAAGCATTTCTCTGGACTCTTCGTGCTGCTGTGCATAGGATTCGGTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp GCTGGATCATGGTGGCTGTGGCTACAGCTCTTGCAACCAACTCCATaGCATCCTGAACATAGTACTCAAAGACAGACTGTGTGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: AGSWWLWLQLLQPTP*HPEHSTQRQTVWFF
Trigger: GAAAAACCACACAGTCTGTCTTTGAGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAGGTGAAATCTATCACTaGGCTTCTTGCAGTATTGAT +
Preference number: 5 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRGEIYH*ASCSID
Trigger: ATCAATACTGCAAGAAGCCAAGTGATAGATTTCACC...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTCTTAAGAGCGTGCACTGGTTCTCTGCTCTGTGGGCAGGCAGGAGACTCTGATGGTGAAATCTATCACTaGGCTTCTTGCAGTATTGAT +
Preference number: 5 (lower is better)
Translates to: LLRACTGSLLCGQAGDSDGEIYH*ASCSID
Trigger: ATCAATACTGCAAGAAGCCAAGTGATAGATTTCACC...ATCAGAGTCTCCTGCCTGCCCACAGAGCAGAGAACCAGTGCACGCTCTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCATGCTTGATGCCCATTaGCAAAGTCTCAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGMLDAH*QSLSDS
Trigger: GCTGTCACTGAGACTTTGCAAATGGGCATCAAGCAT...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCAGCCAGTACTGCAGCTaGGATTTGTTTTTGATTCGT +
Preference number: 5 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLSQYCS*DLFLIR
Trigger: ACGAATCAAAAACAAATCCAAGCTGCAGTACTGGCT...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TACTACAGACCCCAACTTCCTAGGTCCGAATGGCTGCCTCTTTGGCTATCCAGCAGCCAGTACTGCAGCTaGGATTTGTTTTTGATTCGT +
Preference number: 5 (lower is better)
Translates to: YYRPQLPRSEWLPLWLSSSQYCS*DLFLIR
Trigger: ACGAATCAAAAACAAATCCAAGCTGCAGTACTGGCT...GCTGGATAGCCAAAGAGGCAGCCATTCGGACCTAGGAAGTTGGGGTCTGTAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp ATCTATCACTTGGCTTCTTGCAGTATTGATGCTGAAAGAAGTGACTaGCATGTTGGCTGTTCCACTCAGGAGATCACCAACCAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: IYHLASCSIDAERSD*HVGCSTQEITNQPS
Trigger: ACTGGGCTGGTTGGTGATCTCCTGAGTGGAACAGCCAACATGGCAGTCACTTCTTTCAGCATCAATACTGCAAGAAGCCAAGTGATAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TTTCTCTGGATCATTCTTCAGGTACTGCACTCCATCAGGGGTGGCTaGTACATTGTACCTTCTCATGTACTCATGCATCTCTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: FLWIILQVLHSIRGG*YIVPSHVLMHLWEA
Trigger: AGCTTCCCAGAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGATCCAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp GGTGGAGTGTGGACAGTGTGTCCCAAAGTAAGAGGAATTGGGCCACTGATGCTCCCTCTGAAAGTGGTGTaGGCTAAAAACCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: GGVWTVCPKVRGIGPLMLPLKVV*AKNLDK
Trigger: TTTATCAAGGTTTTTAGCCAACACCACTTTCAGAGG...GAGCATCAGTGGCCCAATTCCTCTTACTTTGGGACACACTGTCCACACTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTAGTGGATCCCTTTACTTaGATGGAACCACTGAGACCT +
Preference number: 5 (lower is better)
Translates to: LENGLECGTVCHIPCFPVVDPFT*MEPLRP
Trigger: AGGTCTCAGTGGTTCCATCAAAGTAAAGGGATCCAC...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCTCCCTTAGCTCATTCTAACAGCCCTGTCCCTGGACATTTCCACTGTGAGCCTTACTGCAGCTTGGATTaGTTTTTGATTCGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SPLAHSNSPVPGHFHCEPYCSLD*FLIRGS
Trigger: GCTACCACGAATCAAAAACAAATCCAAGCTGCAGTA...AGGCTCACAGTGGAAATGTCCAGGGACAGGGCTGTTAGAATGAGCTAAGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTGCTGGGGTCCCATGTaGGACCTAGGAAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: HGNEDAGQILFTDLKEILCWGPM*DLGNRD
Trigger: GTCTCTGTTTCCTAGGTCCAACATGGGACCCCAGCA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACTATACATCGGCCTTGCAGGCTGAACAGGTAACCAGGGATGCTTGGAGCCGAAAAGATGTATTTTCGTaGGTTGTCGTGACTCAGATT +
Preference number: 5 (lower is better)
Translates to: HYTSALQAEQVTRDAWSRKDVFS*VVVTQI
Trigger: AATCTGAGTCACGACAACCAACGAAAATACATCTTT...TCGGCTCCAAGCATCCCTGGTTACCTGTTCAGCCTGCAAGGCCGATGTATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp TCTGTCCTCAGCTCCTCCACATTCTGTGAGTCTCCTAAAACCCAGTaGAGATCAGGAGGTGATAGCCCAAACTGTGTGGACATTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SVLSSSTFCESPKTQ*RSGGDSPNCVDISN
Trigger: ATTTGAAATGTCCACACAGTTTGGGCTATCACCTCCTGATCTTCACTGGGTTTTAGGAGACTCACAGAATGTGGAGGAGCTGAGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CTGTCGCTGTCGTGTGAATTGAGGTACACTATACATCGGCCTTGCAGGCTGAACCTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAG +
Preference number: 5 (lower is better)
Translates to: LSLSCELRYTIHRPCRLNLKLYQ*FMVRIE
Trigger: CTCAATCCTGACCATGAACAACTGGTACAATTTTAG...GTTCAGCCTGCAAGGCCGATGTATAGTGTACCTCAATTCACACGACAGCGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCGAGAAGGAGAAGACTTaGTTTCTGTTCCTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSEKEKT*FLFLPL
Trigger: TAAAGGGAGGAACAGAAACAAAGTCTTCTCCTTCTC...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 90 bp TGCCATAGCCTTCAATGGCAAATGGCTTTCCTACGGTCAGAAGCTTaGAGTCAGCATCTATTGACACTTCATAATCCAGAAGGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: CHSLQWQMAFLRSEA*SQHLLTLHNPEGLC
Trigger: ACAAAGCCCTTCTGGATTATGAAGTGTCAATAGATGCTGACTGCAAGCTTCTGACCGTAGGAAAGCCATTTGCCATTGAAGGCTATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp AGGATAGGTGAGGGAGTTGCGGTGGAGCAGAATATAGGTTTAGAAGGACTCTCCTTCCAGATGAAAAAGTaGTTTTCTGAGCTGACGATG +
Preference number: 5 (lower is better)
Translates to: RIGEGVAVEQNIGLEGLSFQMKK*FSELTM
Trigger: CATCGTCAGCTCAGAAAACAACTTTTTCATCTGGAA...GGAGAGTCCTTCTAAACCTATATTCTGCTCCACCGCAACTCCCTCACCTATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCCCTTAATACAGAGTCAGCTCAGAGACCCTGTTACAGGCATTCACTAGGTGGCTTCCAGATGAAAAAGTaGTTTTCTGAGCTGACGATG +
Preference number: 5 (lower is better)
Translates to: SLNTESAQRPCYRHSLGGFQMKK*FSELTM
Trigger: CATCGTCAGCTCAGAAAACAACTTTTTCATCTGGAA...GCCACCTAGTGAATGCCTGTAACAGGGTCTCTGAGCTGACTCTGTATTAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TTTGTGGAGGACAGGTTAGCAGTGATGTTGATGATAGACTCGAGGTaGAACTTGGAGTTATTCTCTGTAAGGAGTAGGAAGTCGGTGATA +
Preference number: 5 (lower is better)
Translates to: FVEDRLAVMLMIDSR*NLELFSVRSRKSVI
Trigger: TATCACCGACTTCCTACTCCTTACAGAGAATAACTCCAAGTTCCACCTCGAGTCTATCATCAACATCACTGCTAACCTGTCCTCCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAAAGCAACAAGCTAAAATaGTACCAGTTGTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQSNKLK*YQLFMV
Trigger: GACCATGAACAACTGGTACAATTTTAGCTTGTTGCT...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTAGGTTAGCAGTGATGTaGATGATAGACTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HGNEDAGQILFTDLKEILRLAVM*MIDSRW
Trigger: CCACCTCGAGTCTATCATCAACATCACTGCTAACCT...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TTGGAGAATGGCTTGGAGTGTGGGACAGTTTGCCACATTCCATGTTTCCCAGTACCTCTGAAAGTGGTGTaGGCTAAAAACCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: LENGLECGTVCHIPCFPVPLKVV*AKNLDK
Trigger: TTTATCAAGGTTTTTAGCCAACACCACTTTCAGAGG...TACTGGGAAACATGGAATGTGGCAAACTGTCCCACACTCCAAGCCATTCTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp TCCCAGATCATTGTTACAGATGGGTGGGAATGGCTAAGGGATGGAACCTACCAATCCAAAACGAAAACCTaGAGAAGGATGATGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SQIIVTDGWEWLRDGTYQSKTKT*RRMMKL
Trigger: AAGCTTCATCATCCTTCTCAAGGTTTTCGTTTTGGA...TTGGTAGGTTCCATCCCTTAGCCATTCCCACCCATCTGTAACAATGATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 90 bp AGAGTTGTCCAGCAGGGCATAAGCCTTCATCATCTACTTCTCTCGTaGAAACAAATGGATGTTCAATCAGTGTCACCACTCTCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: RVVQQGISLHHLLLS*KQMDVQSVSPLSSV
Trigger: TACACTTGAGAGTGGTGACACTGATTGAACATCCATTTGTTTTCACGAGAGAAGTAGATGATGAAGGCTTATGCCCTGCTGGACAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 90 bp TTATTCTCTGTAAGGAGTAGGAAGTCGGTGATATTCCAGTCTTCCTaGCATAGCAACAAGCTAAAATTGTACCAGTTGTTCATGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LFSVRSRKSVIFQSS*HSNKLKLYQLFMVR
Trigger: CCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTATGCCAGGAAGACTGGAATATCACCGACTTCCTACTCCTTACAGAGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTCTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAG +
Preference number: 5 (lower is better)
Translates to: HGNEDAGQILFTDLKEILLKLYQ*FMVRIE
Trigger: CTCAATCCTGACCATGAACAACTGGTACAATTTTAG...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS-3UTR CAA 90 bp CACGGAAATGAAGACGCAGGGCAAATACTCTTCACAGACCTTAAGGAAATACTTTGCAGTCAGCATCTATaGACACTTCATAATCCAGAA +
Preference number: 5 (lower is better)
Translates to: HGNEDAGQILFTDLKEILCSQHL*TLHNPE
Trigger: TTCTGGATTATGAAGTGTCAATAGATGCTGACTGCA...AAGTATTTCCTTAAGGTCTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp GGCTCATCCCTCTGGGCACCCGCCCTGCCGCCGTCCTaGGCGCGACTGGCTGCGCGTGGGGCCGTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GSSLWAPALPPS*ARLAARGAVVQ
Trigger: CTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGAGGGATGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp TGGACCCCGGCCATGCAGGGCGCTCCCCAACCAACGTaGGCCTTGCGAGGGCGCCGGTGGCCGCCACGTCCC +
Preference number: 6 (lower is better)
Translates to: WTPAMQGAPQPT*ALRGRRWPPRP
Trigger: GGGACGTGGCGGCCACCGGCGCCCTCGCAAGGCGCACGTTGGTTGGGGAGCGCCCTGCATGGCCGGGGTCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CGCCCTGCCGCCGTCCTGAGCGCGACTGGCTGCGCGTaGGGCCGTGGTCCAGGGTTGCAAGTGCACCGCGCC +
Preference number: 6 (lower is better)
Translates to: RPAAVLSATGCA*GRGPGLQVHRA
Trigger: GGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GGCACCCGCCCTGCCGCCGTCCTGAGCGCGACTGGCTaGGCGTGGGGCCGTGGTCCAGGGTTGCAAGTGCAC +
Preference number: 6 (lower is better)
Translates to: GTRPAAVLSATG*AWGRGPGLQVH
Trigger: GTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp TCCCCGACTCTGGCTCATCCCTCTGGGCACCCGCCCTaGCGCCGTCCTGAGCGCGACTGGCTGCGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: SPTLAHPSGHPP*RRPERDWLRVG
Trigger: CCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGAGGGATGAGCCAGAGTCGGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp CGGCCATGCAGGGCGCTCCCCAACCAACGTGCGCCTTaGGAGGGCGCCGGTGGCCGCCACGTCCCCGACTCT +
Preference number: 6 (lower is better)
Translates to: RPCRALPNQRAP*EGAGGRHVPDS
Trigger: AGAGTCGGGGACGTGGCGGCCACCGGCGCCCTCGCAAGGCGCACGTTGGTTGGGGAGCGCCCTGCATGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp CTGGCTGCGCGTGGGGCCGTGGTCCAGGGTTGCAAGTaGACCGCGCCCACCCTCACCGCGTGTCCGATGCGC +
Preference number: 6 (lower is better)
Translates to: LAARGAVVQGCK*TAPTLTACPMR
Trigger: GCGCATCGGACACGCGGTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CGCCGTCCTGAGCGCGACTGGCTGCGCGTGGGGCCGTaGTCCAGGGTTGCAAGTGCACCGCGCCCACCCTCA +
Preference number: 6 (lower is better)
Translates to: RRPERDWLRVGP*SRVASAPRPPS
Trigger: TGAGGGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp TCTGGGCACCCGCCCTGCCGCCGTCCTGAGCGCGACTaGCTGCGCGTGGGGCCGTGGTCCAGGGTTGCAAGT +
Preference number: 6 (lower is better)
Translates to: SGHPPCRRPERD*LRVGPWSRVAS
Trigger: ACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGCGGCAGGGCGGGTGCCCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp GCCGTCCTGAGCGCGACTGGCTGCGCGTGGGGCCGTGGTCCAGGGTaGCAAGTGCACCGCGCCCACCCTCACCGCGTGTCCGATGCGCTT +
Preference number: 6 (lower is better)
Translates to: AVLSATGCAWGRGPG*QVHRAHPHRVSDAL
Trigger: AAGCGCATCGGACACGCGGTGAGGGTGGGCGCGGTGCACTTGCAACCCTGGACCACGGCCCCACGCGCAGCCAGTCGCGCTCAGGACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CCCACCCTCACCGCGTGTCCGATGCGCTTGAGGATCTaGCAGGGTTGCGGGTGCGAGGAGGAGCTGGGCACC +
Preference number: 6 (lower is better)
Translates to: PTLTACPMRLRI*QGCGCEEELGT
Trigger: GGTGCCCAGCTCCTCCTCGCACCCGCAACCCTGCCAGATCCTCAAGCGCATCGGACACGCGGTGAGGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CTCCCGCGGAAACTCGTGGCGCACTATGCTGAGCACTaGGATGTGCAGGACAGAACTGACCAAGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LPRKLVAHYAEH*DVQDRTDQVQL
Trigger: GAGCTGGACTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACGAGTTTCCGCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp AAATCCCCAGCCACATGGTCCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTGCTGTGTCTCGAGTCC +
Preference number: 6 (lower is better)
Translates to: KSPATWSSGVAT*RLQWELLCLES
Trigger: GGACTCGAGACACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACCATGTGGCTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GGCCATATTCCCGAGTCCATGACAATCCTTCCCCCTTaGCAGCTACCCAGGCGAGTCCACATTGGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: GHIPESMTILPP*QLPRRVHIGFP
Trigger: GGGAAAGCCAATGTGGACTCGCCTGGGTAGCTGGCAAGGGGGAAGGATTGTCATGGACTCGGGAATATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp AGCCACGAAAATCCCCAGCCACATGGTCCAGTGGAGTaGCCACATGAAGGCTCCAATGGGAGCTGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: SHENPQPHGPVE*PHEGSNGSCCV
Trigger: GACACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACCATGTGGCTGGGGATTTTCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CTGCTTACGGCCAACTGCAGCTCCTGGCGGATCACTTaGATCTGCTTCTCCAACTCGGAGAGTTCCTGCATC +
Preference number: 6 (lower is better)
Translates to: LLTANCSSWRIT*ICFSNSESSCI
Trigger: GATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp AGCTCTGTCTTCCTGCTTACGGCCAACTGCAGCTCCTaGCGGATCACTTGGATCTGCTTCTCCAACTCGGAG +
Preference number: 6 (lower is better)
Translates to: SSVFLLTANCSS*RITWICFSNSE
Trigger: CTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp CCTGCTTACGGCCAACTGCAGCTCCTGGCGGATCACTaGGATCTGCTTCTCCAACTCGGAGAGTTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: PAYGQLQLLADH*DLLLQLGEFLH
Trigger: ATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp CTCTGTCTTCCTGCTTACGGCCAACTGCAGCTCCTGGCGGATCACTaGGATCTGCTTCTCCAACTCGGAGAGTTCCTGCATCACGGAGTT +
Preference number: 6 (lower is better)
Translates to: LCLPAYGQLQLLADH*DLLLQLGEFLHHGV
Trigger: AACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp GCTCTGCAGAAAGGAGAAAGGGTCACTGCTCCACGGTaGGCTTGGGGAAGAGAAAGGCATAAGTGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: ALQKGERVTAPR*AWGRERHKWQV
Trigger: GACCTGCCACTTATGCCTTTCTCTTCCCCAAGCTCACCGTGGAGCAGTGACCCTTTCTCCTTTCTGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CCTTCCCCCTTGCCAGCTACCCAGGCGAGTCCACATTaGCTTTCCCATAGGGTCATACTGCAAGTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: PSPLPATQASPH*LSHRVILQVPD
Trigger: ATCTGGAACTTGCAGTATGACCCTATGGGAAAGCCAATGTGGACTCGCCTGGGTAGCTGGCAAGGGGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp TGCATCACGGAGTTCCGAGCTACATTGAGGGAGTCTGCTTTCCCATaGGTGGTCAGTGAAGCAGGGAGCTCTCTTCTCCTTGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: CITEFRATLRESAFP*VVSEAGSSLLLGGR
Trigger: TCTCCCTCCAAGGAGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp TTCTCCAACTCGGAGAGTTCCTGCATCACGGAGTTCCGAGCTACATaGAGGGAGTCTGCTTTCCCATTGGTGGTCAGTGAAGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: FSNSESSCITEFRAT*RESAFPLVVSEAGS
Trigger: GCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp TACATTGAGGGAGTCTGCTTTCCCATTGGTGGTCAGTaGAGCAGGGAGCTCTCTTCTCCTTGGAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: YIEGVCFPIGGQ*SRELSSPWRER
Trigger: CCTCTCCCTCCAAGGAGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp CGGAGAGTTCCTGCATCACGGAGTTCCGAGCTACATTaGGGGAGTCTGCTTTCCCATTGGTGGTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: RRVPASRSSELH*GSLLSHWWSVK
Trigger: CTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GGAAACTCGTGGCGCACTATGCTGAGCACTGGGATGTaGAGGACAGAACTGACCAAGTCCAGCTCCATCATT +
Preference number: 6 (lower is better)
Translates to: GNSWRTMLSTGM*RTELTKSSSII
Trigger: AATGATGGAGCTGGACTTGGTCAGTTCTGTCCTGCACATCCCAGTGCTCAGCATAGTGCGCCACGAGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GGTTCGTCCTTTGATACTCCTCAAGCTCTGTCTTCCTaGTTACGGCCAACTGCAGCTCCTGGCGGATCACTT +
Preference number: 6 (lower is better)
Translates to: GSSFDTPQALSS*LRPTAAPGGSL
Trigger: AAGTGATCCGCCAGGAGCTGCAGTTGGCCGTAAGCAGGAAGACAGAGCTTGAGGAGTATCAAAGGACGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp GAAGGAGAGCAAGTTCTGGCTGGATCATGGTGGCTGTaGCTACAGCTCTTGCAACCAACTCCATGGCATCCT +
Preference number: 6 (lower is better)
Translates to: EGEQVLAGSWWL*LQLLQPTPWHP
Trigger: AGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CAGTTCATTGTGCTGGGAAGGAGAGCAAGTTCTGGCTaGATCATGGTGGCTGTGGCTACAGCTCTTGCAACC +
Preference number: 6 (lower is better)
Translates to: QFIVLGRRASSG*IMVAVATALAT
Trigger: GGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAACTTGCTCTCCTTCCCAGCACAATGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp GAGTTCCGAGCTACATTGAGGGAGTCTGCTTTCCCATaGGTGGTCAGTGAAGCAGGGAGCTCTCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: EFRATLRESAFP*VVSEAGSSLLL
Trigger: AAGGAGAAGAGAGCTCCCTGCTTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp TCGGAGAGTTCCTGCATCACGGAGTTCCGAGCTACATaGAGGGAGTCTGCTTTCCCATTGGTGGTCAGTGAA +
Preference number: 6 (lower is better)
Translates to: SESSCITEFRAT*RESAFPLVVSE
Trigger: TTCACTGACCACCAATGGGAAAGCAGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp GGATCATTCTTCAGGTACTGCACTCCATCAGGGGTGGCTGGTACATaGTACCTTCTCATGTACTCATGCATCTCTGGGAAGCTCTGCCGT +
Preference number: 6 (lower is better)
Translates to: GSFFRYCTPSGVAGT*YLLMYSCISGKLCR
Trigger: ACGGCAGAGCTTCCCAGAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp GTTCCACTCAGGAGATCACCAACCAGCCCAGTCCAGTaGCCATTTTTCCAAGCTCCATACTTTCCATCCCCT +
Preference number: 6 (lower is better)
Translates to: VPLRRSPTSPVQ*PFFQAPYFPSP
Trigger: AGGGGATGGAAAGTATGGAGCTTGGAAAAATGGTCACTGGACTGGGCTGGTTGGTGATCTCCTGAGTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GTGGGTGTGCTGTTCCTAATGTTTTCCAGCTGGACCTaGAGGAAACTTAGAAGGTCCTTTGTGGAGGACAGG +
Preference number: 6 (lower is better)
Translates to: VGVLFLMFSSWT*RKLRRSFVEDR
Trigger: CCTGTCCTCCACAAAGGACCTTCTAAGTTTCCTGCAGGTCCAGCTGGAAAACATTAGGAACAGCACACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp TTCTGGCTGGATCATGGTGGCTGTGGCTACAGCTCTTaGAACCAACTCCATGGCATCCTGAACATAGTACTC +
Preference number: 6 (lower is better)
Translates to: FWLDHGGCGYSS*NQLHGILNIVL
Trigger: GAGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCATGATCCAGCCAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp ATCACTTGGATCTGCTTCTCCAACTCGGAGAGTTCCTaGATCACGGAGTTCCGAGCTACATTGAGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: ITWICFSNSESS*ITEFRATLRES
Trigger: AGACTCCCTCAATGTAGCTCGGAACTCCGTGATGCAGGAACTCTCCGAGTTGGAGAAGCAGATCCAAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp GCCCAAACTGTGTGGACATTTCAAATATCTGCCGGATaGTCCCCATGTCACAGCCAAACATCACCATTGTGG +
Preference number: 6 (lower is better)
Translates to: AQTVWTFQISAG*SPCHSQTSPLW
Trigger: CCACAATGGTGATGTTTGGCTGTGACATGGGGAGCATCCGGCAGATATTTGAAATGTCCACACAGTTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp TGGTGGCTGTGGCTACAGCTCTTGCAACCAACTCCATaGCATCCTGAACATAGTACTCAAAGACAGACTGTG +
Preference number: 6 (lower is better)
Translates to: WWLWLQLLQPTP*HPEHSTQRQTV
Trigger: CACAGTCTGTCTTTGAGTACTATGTTCAGGATGCCATGGAGTTGGTTGCAAGAGCTGTAGCCACAGCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp CTTGCAGTATTGATGCTGAAAGAAGTGACTGCCATGTaGGCTGTTCCACTCAGGAGATCACCAACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LAVLMLKEVTAM*AVPLRRSPTSP
Trigger: TGGGCTGGTTGGTGATCTCCTGAGTGGAACAGCCAACATGGCAGTCACTTCTTTCAGCATCAATACTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp TTCAGGTACTGCACTCCATCAGGGGTGGCTGGTACATaGTACCTTCTCATGTACTCATGCATCTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: FRYCTPSGVAGT*YLLMYSCISGK
Trigger: CTTCCCAGAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCTGATGGAGTGCAGTACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp CTCAGATTGGAAGTATTCCATACCATGAGCTGCTGGGGTCCCATGTaGGACCTAGGAAACAGAGACAATTCAGAGTCCCCTTCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: LRLEVFHTMSCWGPM*DLGNRDNSESPSVL
Trigger: CAAGACAGAAGGGGACTCTGAATTGTCTCTGTTTCCTAGGTCCAACATGGGACCCCAGCAGCTCATGGTATGGAATACTTCCAATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS CAA 90 bp TGGAGGGAGAGGGATGTCCTGATGGGTCTGGGTACCCAGCTGGTTTaGTCCTTCCTCATCATTAAAGATGTATTTTCGTTGGTTGTCGTG +
Preference number: 6 (lower is better)
Translates to: WRERDVLMGLGTQLV*SFLIIKDVFSLVVV
Trigger: CACGACAACCAACGAAAATACATCTTTAATGATGAGGAAGGACAAAACCAGCTGGGTACCCAGACCCATCAGGACATCCCTCTCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp ACCATTGTGGGTGTGCTGTTCCTAATGTTTTCCAGCTaGACCTGCAGGAAACTTAGAAGGTCCTTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: TIVGVLFLMFSS*TCRKLRRSFVE
Trigger: CTCCACAAAGGACCTTCTAAGTTTCCTGCAGGTCCAGCTGGAAAACATTAGGAACAGCACACCCACAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp CTGGATCATTCTTCAGGTACTGCACTCCATCAGGGGTaGCTGGTACATTGTACCTTCTCATGTACTCATGCA +
Preference number: 6 (lower is better)
Translates to: LDHSSGTALHQG*LVHCTFSCTHA
Trigger: TGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp GTCTGTACACTATGTGTTCACCAATGGTTGTCAGGATaGAGAGACCGAATCCTATGCACAGCAGCACGAAGA +
Preference number: 6 (lower is better)
Translates to: VCTLCVHQWLSG*RDRILCTAARR
Trigger: TCTTCGTGCTGCTGTGCATAGGATTCGGTCTCTCCATCCTGACAACCATTGGTGAACACATAGTGTACAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp GTGGTAGCAGCAGTCTGTACACTATGTGTTCACCAATaGTTGTCAGGATGGAGAGACCGAATCCTATGCACA +
Preference number: 6 (lower is better)
Translates to: VVAAVCTLCVHQ*LSGWRDRILCT
Trigger: TGTGCATAGGATTCGGTCTCTCCATCCTGACAACCATTGGTGAACACATAGTGTACAGACTGCTGCTACCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp GTTCAATCAGTGTCACCACTCTCAAGTGTAACTTGTTaGGGTGATGGAAGTGGGTTTTGTGCCTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: VQSVSPLSSVTC*GDGSGFCASGP
Trigger: AGGCCCAGAGGCACAAAACCCACTTCCATCACCCAAACAAGTTACACTTGAGAGTGGTGACACTGATTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp GTAGCAGCAGTCTGTACACTATGTGTTCACCAATGGTaGTCAGGATGGAGAGACCGAATCCTATGCACAGCA +
Preference number: 6 (lower is better)
Translates to: VAAVCTLCVHQW*SGWRDRILCTA
Trigger: TGCTGTGCATAGGATTCGGTCTCTCCATCCTGACAACCATTGGTGAACACATAGTGTACAGACTGCTGCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp TTGGCTTCTTGCAGTATTGATGCTGAAAGAAGTGACTaGCATGTTGGCTGTTCCACTCAGGAGATCACCAAC +
Preference number: 6 (lower is better)
Translates to: LASCSIDAERSD*HVGCSTQEITN
Trigger: GTTGGTGATCTCCTGAGTGGAACAGCCAACATGGCAGTCACTTCTTTCAGCATCAATACTGCAAGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp ATCATTCTTCAGGTACTGCACTCCATCAGGGGTGGCTaGTACATTGTACCTTCTCATGTACTCATGCATCTC +
Preference number: 6 (lower is better)
Translates to: IILQVLHSIRGG*YIVPSHVLMHL
Trigger: GAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCCCTGATGGAGTGCAGTACCTGAAGAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp AGCACTGCTTTCCCGGACAGTTCCAAAACGAAAACCTaGAGAAGGATGATGAAGCTTAGGGTCATGGATTCC +
Preference number: 6 (lower is better)
Translates to: STAFPDSSKTKT*RRMMKLRVMDS
Trigger: GGAATCCATGACCCTAAGCTTCATCATCCTTCTCAAGGTTTTCGTTTTGGAACTGTCCGGGAAAGCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp CTAGGAAACAGAGACAATTCAGAGTCCCCTTCTGTCTaGCAGGTCCATCTTCTCCATCTGCTCTTTTCCACA +
Preference number: 6 (lower is better)
Translates to: LGNRDNSESPSV*QVHLLHLLFST
Trigger: TGTGGAAAAGAGCAGATGGAGAAGATGGACCTGCAAGACAGAAGGGGACTCTGAATTGTCTCTGTTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS CAA 90 bp ATAGTCCTCAGCACTGCTTTCCCGGACAGTTCCAAAACGAAAACCTaGAGAAGGATGATGAAGCTTAGGGTCATGGATTCCAGAAAGTTC +
Preference number: 6 (lower is better)
Translates to: IVLSTAFPDSSKTKT*RRMMKLRVMDSRKF
Trigger: GAACTTTCTGGAATCCATGACCCTAAGCTTCATCATCCTTCTCAAGGTTTTCGTTTTGGAACTGTCCGGGAAAGCAGTGCTGAGGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp TTGTTTTCTGAGCTGACGATGGTGGATCCCTTTACTTaGATGGAACCACTGAGACCTCTGAAAGTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: LFSELTMVDPFT*MEPLRPLKVVL
Trigger: CAACACCACTTTCAGAGGTCTCAGTGGTTCCATCAAAGTAAAGGGATCCACCATCGTCAGCTCAGAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp GGGCTGGTGAAATCTATCACTTGGCTTCTTGCAGTATaGATGCTGAAAGAAGTGACTGCCATGTTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: GLVKSITWLLAV*MLKEVTAMLAV
Trigger: AACAGCCAACATGGCAGTCACTTCTTTCAGCATCAATACTGCAAGAAGCCAAGTGATAGATTTCACCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp AGGAAACTTAGAAGGTCCTTTGTGGAGGACAGGTTAGCAGTGATGTaGATGATAGACTCGAGGTGGAACTTGGAGTTATTCTCTGTAAGG +
Preference number: 6 (lower is better)
Translates to: RKLRRSFVEDRLAVM*MIDSRWNLELFSVR
Trigger: CCTTACAGAGAATAACTCCAAGTTCCACCTCGAGTCTATCATCAACATCACTGCTAACCTGTCCTCCACAAAGGACCTTCTAAGTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp CAGCAGGGCATAAGCCTTCATCATCTACTTCTCTCGTaGAAACAAATGGATGTTCAATCAGTGTCACCACTC +
Preference number: 6 (lower is better)
Translates to: QQGISLHHLLLS*KQMDVQSVSPL
Trigger: GAGTGGTGACACTGATTGAACATCCATTTGTTTTCACGAGAGAAGTAGATGATGAAGGCTTATGCCCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp GACAGGTTAGCAGTGATGTTGATGATAGACTCGAGGTaGAACTTGGAGTTATTCTCTGTAAGGAGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: DRLAVMLMIDSR*NLELFSVRSRK
Trigger: CTTCCTACTCCTTACAGAGAATAACTCCAAGTTCCACCTCGAGTCTATCATCAACATCACTGCTAACCTGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp CCCATAGGGTCATACTGCAAGTTCCAGATGAAAAAGTaGTTTTCTGAGCTGACGATGGTGGATCCCTTTACT +
Preference number: 6 (lower is better)
Translates to: PIGSYCKFQMKK*FSELTMVDPFT
Trigger: AGTAAAGGGATCCACCATCGTCAGCTCAGAAAACAACTTTTTCATCTGGAACTTGCAGTATGACCCTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS GCA 72 bp CTTCAATGGCAAATGGCTTTCCTACGGTCAGAAGCTTaGAGTCAGCATCTATTGACACTTCATAATCCAGAA +
Preference number: 6 (lower is better)
Translates to: LQWQMAFLRSEA*SQHLLTLHNPE
Trigger: TTCTGGATTATGAAGTGTCAATAGATGCTGACTGCAAGCTTCTGACCGTAGGAAAGCCATTTGCCATTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CCA 72 bp GTAAGGAGTAGGAAGTCGGTGATATTCCAGTCTTCCTaGCATAGCAACAAGCTAAAATTGTACCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: VRSRKSVIFQSS*HSNKLKLYQLF
Trigger: GAACAACTGGTACAATTTTAGCTTGTTGCTATGCCAGGAAGACTGGAATATCACCGACTTCCTACTCCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp TCTTCCTGGCATAGCAACAAGCTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAGACAGTGACATCAGCA +
Preference number: 6 (lower is better)
Translates to: SSWHSNKLKLYQ*FMVRIETVTSA
Trigger: TGCTGATGTCACTGTCTCAATCCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTATGCCAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp AGGTCCATCTTCTCCATCTGCTCTTTTCCACACGTTTaGTCTTGGAACATGGCTGCTTTTCTTCTACAAATG +
Preference number: 6 (lower is better)
Translates to: RSIFSICSFPHV*SWNMAAFLLQM
Trigger: CATTTGTAGAAGAAAAGCAGCCATGTTCCAAGACAAAACGTGTGGAAAAGAGCAGATGGAGAAGATGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS CAA 90 bp ATTGGCTTTCCCATAGGGTCATACTGCAAGTTCCAGATGAAAAAGTaGTTTTCTGAGCTGACGATGGTGGATCCCTTTACTTTGATGGAA +
Preference number: 6 (lower is better)
Translates to: IGFPIGSYCKFQMKK*FSELTMVDPFTLME
Trigger: TTCCATCAAAGTAAAGGGATCCACCATCGTCAGCTCAGAAAACAACTTTTTCATCTGGAACTTGCAGTATGACCCTATGGGAAAGCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 90 bp CTGTCTTGCAGGTCCATCTTCTCCATCTGCTCTTTTCCACACGTTTaGTCTTGGAACATGGCTGCTTTTCTTCTACAAATGATGTGTTTA +
Preference number: 6 (lower is better)
Translates to: LSCRSIFSICSFPHV*SWNMAAFLLQMMCL
Trigger: TAAACACATCATTTGTAGAAGAAAAGCAGCCATGTTCCAAGACAAAACGTGTGGAAAAGAGCAGATGGAGAAGATGGACCTGCAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093859.11
CDS CAA 90 bp ACCCAGCTGGTTTTGTCCTTCCTCATCATTAAAGATGTATTTTCGTaGGTTGTCGTGACTCAGATTGGAAGTATTCCATACCATGAGCTG +
Preference number: 6 (lower is better)
Translates to: TQLVLSFLIIKDVFS*VVVTQIGSIPYHEL
Trigger: CAGCTCATGGTATGGAATACTTCCAATCTGAGTCACGACAACCAACGAAAATACATCTTTAATGATGAGGAAGGACAAAACCAGCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp AATTGTACCAGTTGTTCATGGTCAGGATTGAGACAGTaGCATCAGCATCAGAACTTAGTGAATTTTCTAAAC +
Preference number: 6 (lower is better)
Translates to: NCTSCSWSGLRQ*HQHQNLVNFLN
Trigger: GTTTAGAAAATTCACTAAGTTCTGATGCTGATGTCACTGTCTCAATCCTGACCATGAACAACTGGTACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS CAA 72 bp GTTTTGTCCTTCCTCATCATTAAAGATGTATTTTCGTaGGTTGTCGTGACTCAGATTGGAAGTATTCCATAC +
Preference number: 6 (lower is better)
Translates to: VLSFLIIKDVFS*VVVTQIGSIPY
Trigger: GTATGGAATACTTCCAATCTGAGTCACGACAACCAACGAAAATACATCTTTAATGATGAGGAAGGACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11
CDS TCA 72 bp TGTTGGCTAAAAACCTTGATAAATATTGTCCAGAAGTaGGATTTGTGGTTTTCACATCCATGCAGTTCATTG +
Preference number: 6 (lower is better)
Translates to: CWLKTLINIVQK*DLWFSHPCSSL
Trigger: CAATGAACTGCATGGATGTGAAAACCACAAATCTCACTTCTGGACAATATTTATCAAGGTTTTTAGCCAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076674.4
ENSMUST00000093859.11