Pregenerated sensors for GRIN2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020734Ensembl transcript IDs: ENSMUST00000003351.13, ENSMUST00000106554.2
Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTaGAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCAAGAC | + |
Preference number: 1 (lower is better) Translates to: KWLTPGQGHIFTPWD*KTSRDEQDPSPHQD Trigger: GTCTTGGTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CCA 90 bp | CAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTaGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCT | + |
Preference number: 1 (lower is better) Translates to: QRRRQRSQSLSVPQT*PRPATESSPAGTRA Trigger: AGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CCA 90 bp | ACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTaGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACAC | + |
Preference number: 1 (lower is better) Translates to: TRKWLTPGQGHIFTP*DCKTSRDEQDPSPH Trigger: GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATaGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCT | + |
Preference number: 1 (lower is better) Translates to: GHKLAMEDILFTGVS*PEFQRRRQRSQSLS Trigger: AGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTCTGTCCCCCAAACTTaGCCAAGACCAGCCACAGAA | + |
Preference number: 2 (lower is better) Translates to: EMADARTGTHFYSLGLQDSVPQT*PRPATE Trigger: TTCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGA...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACATCTGTCCCCCAAACTTaGCCAAGACCAGCCACAGAA | + |
Preference number: 2 (lower is better) Translates to: TQPPFPILCPQPKATATTSVPQT*PRPATE Trigger: TTCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGA...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAAGATATCCTTTTCACTaGGGTCTCATGGCCAGAATT | + |
Preference number: 2 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSRYPFH*GLMARI Trigger: AATTCTGGCCATGAGACCCCAGTGAAAAGGATATCT...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCGCTAAGGTCATAAGCTaGCCATGGAAGATATCCTTT | + |
Preference number: 2 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPAKVIS*PWKISF Trigger: AAAGGATATCTTCCATGGCCAGCTTATGACCTTAGC...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CCA 72 bp | AGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTaGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGA | + |
Preference number: 3 (lower is better) Translates to: RQRSQSLSVPQT*PRPATESSPAG Trigger: TCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR TCA 72 bp | AACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTaGCGCCAGGACAGGGACACATTTTTACTCCCTGGG | + |
Preference number: 3 (lower is better) Translates to: NPRPQQPQLGNG*RQDRDTFLLPG Trigger: CCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR GCA 72 bp | ACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTaGAAGACTTCACGTGATGAGCAAGATCCCAGCCCA | + |
Preference number: 3 (lower is better) Translates to: TPGQGHIFTPWD*KTSRDEQDPSP Trigger: TGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CCA 72 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTaGGACTGCAAGACTTCACGTGATGAGCAAGATCCC | + |
Preference number: 3 (lower is better) Translates to: WLTPGQGHIFTP*DCKTSRDEQDP Trigger: GGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CAA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCACAGAGGAGTCAAAGCTaGTCTGTCCCCCAAACTTGG | + |
Preference number: 3 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSQRSQS*SVPQTW Trigger: CCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTG...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR-3UTR CAA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCAGAGGAGTCAAAGCTaGTCTGTCCCCCAAACTTGG | + |
Preference number: 3 (lower is better) Translates to: EMADARTGTHFYSLGLQDQRSQS*SVPQTW Trigger: CCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTG...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAAGGACCCGGGGTGCATaGCCGCGGGCCGGAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRRTRGA*PRAGGG Trigger: ACCACCTCCGGCCCGCGGTCATGCACCCCGGGTCCT...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCGGCCCAGCTCCAGCGTaGGCACGTCCAGCAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: KKKAEESKLVCPPNLAKTGPAPA*ARPAAA Trigger: GGCGGCTGCTGGACGTGCTCACGCTGGAGCTGGGCC...GGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAGGACCCGGGGTGCATaGCCGCGGGCCGGAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTRTRGA*PRAGGG Trigger: ACCACCTCCGGCCCGCGGTCATGCACCCCGGGTCCT...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACGCCCACTGGGAAGGCTaGAGGGGGAGCGTCGGTGCT | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDAHWEG*RGSVGA Trigger: AGCACCGACGCTCCCCCTGCAGCCTTCCCAGTGGGC...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCAGTGGCCACTGTCAGGTaGCGGCTGTCCACCACAGGC | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPVATVR*RLSTTG Trigger: GCCTGTGGTGGACAGCCGGCACCTGACAGTGGCCAC...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACCGAACCCTCTTGCCGTaGTTGCCGTTGGTCACCAGG | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYRTLLP*LPLVTR Trigger: CCTGGTGACCAACGGCAAGCACGGCAAGAGGGTTCG...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACTCGAGTGAAGGCTTCTaGCACGGAGCTGGGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYSSEGF*HGAGQG Trigger: TCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGA...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACAGACGAGTCCGGGCCTaGGCCTGCAGTGGCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDRRVRA*ACSGPE Trigger: CTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCT...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAGCCAGCTCAGGTAGCTaGCGTCGGCGACGGCGCGCA | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTASSGS*RRRRRA Trigger: TGCGCGCCGTCGCCGACGCCAGCTACCTGAGCTGGC...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCACTGACGGGTCCTGGGTaGCTTCGGCAGTCTCCAGCC | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPLTGPG*LRQSPA Trigger: GGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAG...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACCTCGGCCTTCCCAGGTaGCATTCAGCAGATGCCTGT | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYLGLPR*HSADAC Trigger: ACAGGCATCTGCTGAATGTCACCTGGGAAGGCCGAG...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGCAGTGGCCCAGAGCTaGCAAACACCACCGCCACGG | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSAVAQS*QTPPPR Trigger: CCGTGGCGGTGGTGTTTGGCAGCTCTGGGCCACTGC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAGCGCGTGGCCCGGGTaGAGGCTGGTGATGACAGCG | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTSAWPG*RLVMTA Trigger: CGCTGTCATCACCAGCCTGCACCCGGGCCACGCGCT...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGTGGCCACTGTCAGGTaGCGGCTGTCCACCACAGGC | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSVATVR*RLSTTG Trigger: GCCTGTGGTGGACAGCCGGCACCTGACAGTGGCCAC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAACATGCTGTCTGGGCTaGCAGGTGGCGGCCACCCCT | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSTCCLG*QVAATP Trigger: AGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGT...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACACATGCTGTCTGGGCTaGCAGGTGGCGGCCACCCCT | + |
Preference number: 4 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHTCCLG*QVAATP Trigger: AGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGT...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCAACTGATGAGGCCCACTaGGAAGGCTGCAGGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPTDEAH*EGCRGS Trigger: GCTCCCCCTGCAGCCTTCCCAGTGGGCCTCATCAGT...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGCTGACGGGTCCTGGGTaGCTTCGGCAGTCTCCAGCC | + |
Preference number: 4 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKLTGPG*LRQSPA Trigger: GGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAG...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCTTCTGCCACGGAGCTaGGCAGGGAAGCGTGCCGAG | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDLLPRS*AGKRAE Trigger: CTCGGCACGCTTCCCTGCCCAGCTCCGTGGCAGAAG...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCAGCCCACAGATTTGGGTaGGGATGCTGCTGGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPAHRFG*GCCWGW Trigger: CCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGC...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCTGGCTCCTTGGGGGTaGGGACCACAGCAGAACCTC | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDLAPWG*GPQQNL Trigger: GAGGTTCTGCTGTGGTCCTCACCCCCAAGGAGCCAG...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCAGAGAAATGGGCGCCCTaGCCTCTCTGCTCGAGGGAA | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPEKWAP*PLCSRE Trigger: TTCCCTCGAGCAGAGAGGTCAGGGCGCCCATTTCTC...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCGAACAGGGTGGAGGGTaGCGGCAGACAGTCCCCCAG | + |
Preference number: 4 (lower is better) Translates to: KKKAEESKLVCPPNLAKTEQGGG*RQTVPQ Trigger: CTGGGGGACTGTCTGCCGTCACCCTCCACCCTGTTC...GGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAGCAGTGGCCCAGAGCTaGCAAACACCACCGCCACGG | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTAVAQS*QTPPPR Trigger: CCGTGGCGGTGGTGTTTGGCAGCTCTGGGCCACTGC...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACACCGAGGGGGAGACGGTaGCGTTGCTCCTTGCCACCA | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTPRGRR*RCSLPP Trigger: TGGTGGCAAGGAGCAACGGCACCGTCTCCCCCTCGG...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAGGCCTGGGCCTGCAGTaGCCCAGAGCTGCCAAACAC | + |
Preference number: 4 (lower is better) Translates to: LNLRFQFCVPNPRPQQPQGLGLQ*PRAAKH Trigger: GTGTTTGGCAGCTCTGGGCCACTGCAGGCCCAGGCC...TTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCGCCAGCTCAGGTAGCTaGCGTCGGCGACGGCGCGCA | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLAASSGS*RRRRRA Trigger: TGCGCGCCGTCGCCGACGCCAGCTACCTGAGCTGGC...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACCGATCACAACCATTGTaGGCTGGACCAGGTACCCAC | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYRSQPL*AGPGTH Trigger: GTGGGTACCTGGTCCAGCCCACAATGGTTGTGATCG...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAGCCTTTCTTCCAGTGTaGCCACTGTCAGGTGCCGGC | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRAFLPV*PLSGAG Trigger: GCCGGCACCTGACAGTGGCCACACTGGAAGAAAGGC...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGGGAGCGCCAGGTCTATaGCCCGCTTCCAGTGGGAGT | + |
Preference number: 4 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKGAPGL*PASSGS Trigger: ACTCCCACTGGAAGCGGGCCATAGACCTGGCGCTCC...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAGTGGCTGGAACAGGGTaGAGGGTGACGGCAGACAGT | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRVAGTG*RVTADS Trigger: ACTGTCTGCCGTCACCCTCCACCCTGTTCCAGCCAC...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACACACCAAGGAGTGAAGTaGGAAGCAGGGCGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTHQGVK*EAGRAP Trigger: TGGGGCCCGCCCTGCTTCTCACTTCACTCCTTGGTG...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGGCCCAGCTCCAGCGTaGGCACGTCCAGCAGCCGCC | + |
Preference number: 4 (lower is better) Translates to: RISKKKAEESKLVCPPNLGPAPA*ARPAAA Trigger: GGCGGCTGCTGGACGTGCTCACGCTGGAGCTGGGCC...CAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGGTACTAACCACACGTaGCCGGGTCCCACCAAGCCA | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSGTNHT*PGPTKP Trigger: TGGCTTGGTGGGACCCGGTCACGTGTGGTTAGTACC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGATGCCAGACCCAATGGTaGCCAGCTTGCAGCCTTCGT | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRCQTQW*PACSLR Trigger: ACGAAGGCTGCAAGCTGGTCACCATTGGGTCTGGCA...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGCACATTGGCCTGGGCTaGGCCTGCTGTAAGGTCCGG | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWHIGLG*ACCKVR Trigger: CCGGACCTTACAGCAGGCTCAGCCCAGGCCAATGTG...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCGAACAGGGTGGAGGGTaGCGGCAGACAGTCCCCCAG | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGEQGGG*RQTVPQ Trigger: CTGGGGGACTGTCTGCCGTCACCCTCCACCCTGTTC...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGCTCCCAAGTTCCAATaGGCCAGGGACTGTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSAPKFQ*ARDCGW Trigger: CCAGCCACAGTCCCTGGCTCATTGGAACTTGGGAGC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAAAGTCCAGGAAGTTCTaGGGGGTGAGACGAGTCCGG | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRKSRKF*GVRRVR Trigger: CCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTT...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGCGCGTGGCCCGGGTaGAGGCTGGTGATGACAGCG | + |
Preference number: 4 (lower is better) Translates to: FQRRRQRSQSLSVPQTWPSAWPG*RLVMTA Trigger: CGCTGTCATCACCAGCCTGCACCCGGGCCACGCGCT...TGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCACCCTCTTGCCGTGCTTaGCGTTGGTCACCAGGTACA | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPPSCRA*RWSPGT Trigger: TGTACCTGGTGACCAACGGCAAGCACGGCAAGAGGG...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACGTTGTTGAAGACCAGTaGCCACAGCAACCACACGGA | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYVVEDQ*PQQPHG Trigger: TCCGTGTGGTTGCTGTGGGCACTGGTCTTCAACAAC...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGCTAGCCCCAGGGTCCTaGCTCTGTGTGATGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKLAPGS*LCVMEA Trigger: AGCCTCCATCACACAGAGGCAGGACCCTGGGGCTAG...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGCCTTTCTTCCAGTGTaGCCACTGTCAGGTGCCGGC | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSAFLPV*PLSGAG Trigger: GCCGGCACCTGACAGTGGCCACACTGGAAGAAAGGC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCACGTGACCGGTACACCTaGCAGGCAGAGGGTTGGATC | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSRDRYT*QAEGWI Trigger: GATCCAACCCTCTGCCTGCCAGGTGTACCGGTCACG...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGCCAGGGACTGTGGCTaGAACAGGGTGGAGGGTGAC | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWARDCG*NRVEGD Trigger: GTCACCCTCCACCCTGTTCCAGCCACAGTCCCTGGC...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGACTTCTGATTCCAGGCTaGAGATCCGCCTCCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRLLIPG*RSASRC Trigger: GCACCTGGAGGCGGATCTCCAGCCTGGAATCAGAAG...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACCAGGGCTCTCCACAATaGCAAAAGGCCTTTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYQGSPQ*QKAFLP Trigger: TGGAAGAAAGGCCTTTTGTCATTGTGGAGAGCCCTG...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCACCATCTTCAGGCTTGTaGGAGCATCCTCCACCGAGC | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSPSSGL*EHPPPS Trigger: GCTCGGTGGAGGATGCTCTCACAAGCCTGAAGATGG...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGGTCCTGCCTCTGTGTaGTGGAGGCTCCCAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGGPASV*WRLPSS Trigger: GGAACTTGGGAGCCTCCATCACACAGAGGCAGGACC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGTGTCCTCAAAGACGATaGCGTGGACTCGGGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWCPQRR*RGLGRH Trigger: GTGCCGCCCGAGTCCACGGCATCGTCTTTGAGGACA...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAGCACCTGCAGCTGCTaGTCCAGGGACACGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLASTCSC*SRDTPS Trigger: GCTGGGCGTGTCCCTGGAGCAGCAGCTGCAGGTGCT...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ATGGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAGCACCTGCAGCTGCTaGTCCAGGGACACGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: MARISKKKAEESKLVCPPSTCSC*SRDTPS Trigger: GCTGGGCGTGTCCCTGGAGCAGCAGCTGCAGGTGCT...TGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAATCTCCCAGAGGCGATaGCGGTTGAGAGCGATCACA | + |
Preference number: 4 (lower is better) Translates to: AEESKLVCPPNLAKTSHRISQRR*RLRAIT Trigger: TGTGATCGCTCTCAACCGGCATCGCCTCTGGGAGAT...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCCCTCTTGCCGTGCTTaGCGTTGGTCACCAGGTACA | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDPSCRA*RWSPGT Trigger: TGTACCTGGTGACCAACGGCAAGCACGGCAAGAGGG...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGATCGAGTGAAGGCTTCTaGCACGGAGCTGGGCAGGGA | + |
Preference number: 4 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGSSEGF*HGAGQG Trigger: TCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGA...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTAGACGAGTCCGGGCCTaGGCCTGCAGTGGCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTRRVRA*ACSGPE Trigger: CTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCT...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTCGAGGAAGAGCGCGTaGCCCGGGTGCAGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTSRKSA*PGCRLV Trigger: CACCAGCCTGCACCCGGGCCACGCGCTCTTCCTCGA...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAACTGATGAGGCCCACTaGGAAGGCTGCAGGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPETDEAH*EGCRGS Trigger: GCTCCCCCTGCAGCCTTCCCAGTGGGCCTCATCAGT...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCCACCGAGGGCCAGAATaGCTACACCGTCGCGGACTT | + |
Preference number: 4 (lower is better) Translates to: KKKAEESKLVCPPNLAKTHRGPE*LHRRGL Trigger: AAGTCCGCGACGGTGTAGCCATTCTGGCCCTCGGTG...GGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAACAACCATTGTGGGCTaGACCAGGTACCCACCAGGG | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSTTIVG*TRYPPG Trigger: CCCTGGTGGGTACCTGGTCCAGCCCACAATGGTTGT...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAGGAGCGCCAGGTCTATaGCCCGCTTCCAGTGGGAGT | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPEGAPGL*PASSGS Trigger: ACTCCCACTGGAAGCGGGCCATAGACCTGGCGCTCC...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAGCATCTTCAGCACATTaGCCTGGGCTGAGCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSASSAH*PGLSLL Trigger: CAGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGC...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACACGTGACCGGTACACCTaGCAGGCAGAGGGTTGGATC | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTRDRYT*QAEGWI Trigger: GATCCAACCCTCTGCCTGCCAGGTGTACCGGTCACG...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGTGGCTGGAACAGGGTaGAGGGTGACGGCAGACAGT | + |
Preference number: 4 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGVAGTG*RVTADS Trigger: ACTGTCTGCCGTCACCCTCCACCCTGTTCCAGCCAC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCATTATATCCCCGCTGCTaGAGGTGTGGTTGCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPLYPRC*RCGCSV Trigger: GACAGAGCAACCACACCTTCAGCAGCGGGGATATAA...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCAAGTCGTAGGAGAACTTaGCCACCTTGGCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPSRRRT*PPWPAS Trigger: AGAAGCTGGCCAAGGTGGTCAAGTTCTCCTACGACT...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGTGCCCGCCATGTAGTTaGGGACGGCGGCATCATAGA | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWCPPCS*GRRHHR Trigger: TCTATGATGCCGCCGTCCTCAACTACATGGCGGGCA...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCATGTAGATGCCCCTGCTaGAAGCCAGCAGGAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSCRCPC*KPAGSP Trigger: TGGACTTCCTGCTGGCTTTCAGCAGGGGCATCTACA...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCCACATTGGCCTGGGCTaGGCCTGCTGTAAGGTCCGG | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLAHIGLG*ACCKVR Trigger: CCGGACCTTACAGCAGGCTCAGCCCAGGCCAATGTG...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCGCTCCCAAGTTCCAATaGGCCAGGGACTGTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGAPKFQ*ARDCGW Trigger: CCAGCCACAGTCCCTGGCTCATTGGAACTTGGGAGC...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAACCTTGAACAGCACCTaGAGCTGCTGCTCCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LNLRFQFCVPNPRPQQPQTLNST*SCCSRD Trigger: GTCCCTGGAGCAGCAGCTGCAGGTGCTGTTCAAGGT...TTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCCACTGGGAAGGCTaGAGGGGGAGCGTCGGTGCT | + |
Preference number: 4 (lower is better) Translates to: RISKKKAEESKLVCPPNLAHWEG*RGSVGA Trigger: AGCACCGACGCTCCCCCTGCAGCCTTCCCAGTGGGC...CAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCAGGCTGCAGAGAAGTaGTGTAGCGAGGCCATACTG | + |
Preference number: 4 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHQAAEK*CSEAIL Trigger: CAGTATGGCCTCGCTACAGCACTTCTCTGCAGCCTG...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
||
CDS-3UTR GCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACACACCACGAACCCTCTTaGCGTGCTTGCCGTTGGTCA | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTHHEPS*RACRWS Trigger: TGACCAACGGCAAGCACGGCAAGAGGGTTCGTGGTG...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCGGTGCCGTTGCTCCTTaGCACCATCACACTGATGCC | + |
Preference number: 4 (lower is better) Translates to: KKKAEESKLVCPPNLAKTGAVAP*HHHTDA Trigger: GGCATCAGTGTGATGGTGGCAAGGAGCAACGGCACC...GGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTCCGAGGGGGAGACGGTaGCGTTGCTCCTTGCCACCA | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTPRGRR*RCSLPP Trigger: TGGTGGCAAGGAGCAACGGCACCGTCTCCCCCTCGG...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACGTAGCGAGGCCATACTaGATACTTCATGTACAGGAC | + |
Preference number: 4 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYVARPY*ILHVQD Trigger: GTCCTGTACATGAAGTATCCAGTATGGCCTCGCTAC...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCTTCTGCCACGGAGCTaGGCAGGGAAGCGTGCCGAG | + |
Preference number: 4 (lower is better) Translates to: HKLAMEDILFTGVSWPEFLLPRS*AGKRAE Trigger: CTCGGCACGCTTCCCTGCCCAGCTCCGTGGCAGAAG...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCCAGCAGAACGGCAGGTaGGTATGGGTGTGCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGQQNGR*VWVCRQ Trigger: CTGCCTGCACACCCATACCCACCTGCCGTTCTGCTG...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGCTTCTGATTCCAGGCTaGAGATCCGCCTCCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWLLIPG*RSASRC Trigger: GCACCTGGAGGCGGATCTCCAGCCTGGAATCAGAAG...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCACCAAGGAGTGAAGTaGGAAGCAGGGCGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: HKLAMEDILFTGVSWPEFHQGVK*EAGRAP Trigger: TGGGGCCCGCCCTGCTTCTCACTTCACTCCTTGGTG...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAACCATCTTCAGGCTTGTaGGAGCATCCTCCACCGAGC | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPEPSSGL*EHPPPS Trigger: GCTCGGTGGAGGATGCTCTCACAAGCCTGAAGATGG...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ATGGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAGGTCCTGCCTCTGTGTaGTGGAGGCTCCCAAGTTCC | + |
Preference number: 4 (lower is better) Translates to: MARISKKKAEESKLVCPPGPASV*WRLPSS Trigger: GGAACTTGGGAGCCTCCATCACACAGAGGCAGGACC...TGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTAACAGCACCTGCAGCTaGTGCTCCAGGGACACGCCC | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTNSTCS*CSRDTP Trigger: GGGCGTGTCCCTGGAGCAGCAGCTGCAGGTGCTGTT...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCAACAGCACCTGCAGCTaGTGCTCCAGGGACACGCCC | + |
Preference number: 4 (lower is better) Translates to: NFKEEGRGVKACLSPKLGNSTCS*CSRDTP Trigger: GGGCGTGTCCCTGGAGCAGCAGCTGCAGGTGCTGTT...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
||
CDS-3UTR GCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAACCTTGAACAGCACCTaGAGCTGCTGCTCCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPETLNST*SCCSRD Trigger: GTCCCTGGAGCAGCAGCTGCAGGTGCTGTTCAAGGT...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACACAGGCTGCAGAGAAGTaGTGTAGCGAGGCCATACTG | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTQAAEK*CSEAIL Trigger: CAGTATGGCCTCGCTACAGCACTTCTCTGCAGCCTG...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAATGGCCCGCTTCCAGTaGGAGTCTTTCTGCATGGCA | + |
Preference number: 4 (lower is better) Translates to: TQPPFPILCPQPKATATTMARFQ*ESFCMA Trigger: TGCCATGCAGAAAGACTCCCACTGGAAGCGGGCCAT...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAGCATCTTCAGCACATTaGCCTGGGCTGAGCCTGCTG | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPEASSAH*PGLSLL Trigger: CAGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGC...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTGCCAGGGACTGTGGCTaGAACAGGGTGGAGGGTGAC | + |
Preference number: 4 (lower is better) Translates to: HKLAMEDILFTGVSWPEFARDCG*NRVEGD Trigger: GTCACCCTCCACCCTGTTCCAGCCACAGTCCCTGGC...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCGGTACTAACCACACGTaGCCGGGTCCCACCAAGCCA | + |
Preference number: 4 (lower is better) Translates to: NFKEEGRGVKACLSPKLGGTNHT*PGPTKP Trigger: TGGCTTGGTGGGACCCGGTCACGTGTGGTTAGTACC...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCAGGGCTCTCCACAATaGCAAAAGGCCTTTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHQGSPQ*QKAFLP Trigger: TGGAAGAAAGGCCTTTTGTCATTGTGGAGAGCCCTG...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCCCTTGGCCAGCTTCTTaGGGATGTCGATGCAGAAGC | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGPWPAS*GCRCRS Trigger: GCTTCTGCATCGACATCCTCAAGAAGCTGGCCAAGG...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAATCTCCCAGAGGCGATaGCGGTTGAGAGCGATCACA | + |
Preference number: 4 (lower is better) Translates to: GHKLAMEDILFTGVSWPEISQRR*RLRAIT Trigger: TGTGATCGCTCTCAACCGGCATCGCCTCTGGGAGAT...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGCGAACCCTCTTGCCGTaGTTGCCGTTGGTCACCAGG | + |
Preference number: 4 (lower is better) Translates to: GHGRYPFHWGLMARISKKRTLLP*LPLVTR Trigger: CCTGGTGACCAACGGCAAGCACGGCAAGAGGGTTCG...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGCTAGCCCCAGGGTCCTaGCTCTGTGTGATGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: GHGRYPFHWGLMARISKKLAPGS*LCVMEA Trigger: AGCCTCCATCACACAGAGGCAGGACCCTGGGGCTAG...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCACCGAGGGCCAGAATaGCTACACCGTCGCGGACTT | + |
Preference number: 4 (lower is better) Translates to: HKLAMEDILFTGVSWPEFHRGPE*LHRRGL Trigger: AAGTCCGCGACGGTGTAGCCATTCTGGCCCTCGGTG...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCACAACCATTGTGGGCTaGACCAGGTACCCACCAGGG | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLATTIVG*TRYPPG Trigger: CCCTGGTGGGTACCTGGTCCAGCCCACAATGGTTGT...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGGGAGTCTTTCTGCATaGCAATGCCATAGCCAGTGG | + |
Preference number: 4 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGGSLSA*QCHSQW Trigger: CCACTGGCTATGGCATTGCCATGCAGAAAGACTCCC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCCCAGCTGGGATGAGCTaGGCACTGAGTGTCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGPAGMS*ALSVEV Trigger: AACTTCGACACTCAGTGCCCAGCTCATCCCAGCTGG...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGCAGGAAGTCCAGCTaGGATGAGCTGGGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: FQRRRQRSQSLSVPQTWPSRKSS*DELGTE Trigger: CTCAGTGCCCAGCTCATCCCAGCTGGACTTCCTGCT...TGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCCCAGGTGCAGGACCTTaGAAACCCTTGTGTCCCACA | + |
Preference number: 4 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGPGAGP*KPLCPT Trigger: TGTGGGACACAAGGGTTTCCAAGGTCCTGCACCTGG...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAATTCCTCCAGCACCTTaGACAGCACCTGCAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: FQRRRQRSQSLSVPQTWPIPPAP*TAPAAA Trigger: AGCAGCTGCAGGTGCTGTTCAAGGTGCTGGAGGAAT...TGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCCCTTGGCCAGCTTCTTaGGGATGTCGATGCAGAAGC | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLAPWPAS*GCRCRS Trigger: GCTTCTGCATCGACATCCTCAAGAAGCTGGCCAAGG...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGCCCGCCATGTAGTTaGGGACGGCGGCATCATAGA | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTCPPCS*GRRHHR Trigger: TCTATGATGCCGCCGTCCTCAACTACATGGCGGGCA...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCGGTGCCGTTGCTCCTTaGCACCATCACACTGATGCC | + |
Preference number: 4 (lower is better) Translates to: NFKEEGRGVKACLSPKLGGAVAP*HHHTDA Trigger: GGCATCAGTGTGATGGTGGCAAGGAGCAACGGCACC...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCGGCCTGGGCCTGCAGTaGCCCAGAGCTGCCAAACAC | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPGLGLQ*PRAAKH Trigger: GTGTTTGGCAGCTCTGGGCCACTGCAGGCCCAGGCC...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTGACGCCATCGATGTATTGTTCCTaGATCATGAAGGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: LCPQPKATATTTRKWLTPSMYCS*IMKAAR Trigger: TCTGGCAGCCTTCATGATCCAGGAACAATACATCGA...TGGCGTCAGCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCGCCAAAACGGAAGGGTaGGTATTGGTCTTGAGGCCG | + |
Preference number: 4 (lower is better) Translates to: ISKKKAEESKLVCPPNLAAKTEG*VLVLRP Trigger: CGGCCTCAAGACCAATACCCACCCTTCCGTTTTGGC...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCACCAGCTGGGATGAGCTaGGCACTGAGTGTCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: FQRRRQRSQSLSVPQTWPPAGMS*ALSVEV Trigger: AACTTCGACACTCAGTGCCCAGCTCATCCCAGCTGG...TGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCAGCAGGAAGTCCAGCTaGGATGAGCTGGGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: NFKEEGRGVKACLSPKLGSRKSS*DELGTE Trigger: CTCAGTGCCCAGCTCATCCCAGCTGGACTTCCTGCT...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTTGCCCCAGTTCTCGATaGTACGAGTGGCGCGGTCCA | + |
Preference number: 4 (lower is better) Translates to: QNFKEEGRGVKACLSPKLCPSSR*YEWRGP Trigger: TGGACCGCGCCACTCGTACCATCGAGAACTGGGGCA...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGCAGCAGAACGGCAGGTaGGTATGGGTGTGCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: RISKKKAEESKLVCPPNLQQNGR*VWVCRQ Trigger: CTGCCTGCACACCCATACCCACCTGCCGTTCTGCTG...CAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTATTCCTCCAGCACCTTaGACAGCACCTGCAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTIPPAP*TAPAAA Trigger: AGCAGCTGCAGGTGCTGTTCAAGGTGCTGGAGGAAT...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTCTCGGCCTTCCCAGGTaGCATTCAGCAGATGCCTGT | + |
Preference number: 4 (lower is better) Translates to: QNFKEEGRGVKACLSPKLLGLPR*HSADAC Trigger: ACAGGCATCTGCTGAATGTCACCTGGGAAGGCCGAG...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | TTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGTTATATCCCCGCTGCTaGAGGTGTGGTTGCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: FPILCPQPKATATTTRKWLYPRC*RCGCSV Trigger: GACAGAGCAACCACACCTTCAGCAGCGGGGATATAA...CCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTTGCCAGACCCAATGGTaGCCAGCTTGCAGCCTTCGT | + |
Preference number: 4 (lower is better) Translates to: QNFKEEGRGVKACLSPKLCQTQW*PACSLR Trigger: ACGAAGGCTGCAAGCTGGTCACCATTGGGTCTGGCA...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGTGTAGATGCCCCTGCTaGAAGCCAGCAGGAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: GHGRYPFHWGLMARISKKCRCPC*KPAGSP Trigger: TGGACTTCCTGCTGGCTTTCAGCAGGGGCATCTACA...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTCACCACGAACCCTCTTaGCGTGCTTGCCGTTGGTCA | + |
Preference number: 4 (lower is better) Translates to: QNFKEEGRGVKACLSPKLHHEPS*RACRWS Trigger: TGACCAACGGCAAGCACGGCAAGAGGGTTCGTGGTG...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTAGGTGGGTATGGGTGTaGAGGCAGACATGCTGTCTG | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTRWVWV*RQTCCL Trigger: CAGACAGCATGTCTGCCTGCACACCCATACCCACCT...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGAGGTGGGTATGGGTGTaGAGGCAGACATGCTGTCTG | + |
Preference number: 4 (lower is better) Translates to: GHGRYPFHWGLMARISKKRWVWV*RQTCCL Trigger: CAGACAGCATGTCTGCCTGCACACCCATACCCACCT...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCGATCACAACCATTGTaGGCTGGACCAGGTACCCAC | + |
Preference number: 4 (lower is better) Translates to: NFKEEGRGVKACLSPKLGRSQPL*AGPGTH Trigger: GTGGGTACCTGGTCCAGCCCACAATGGTTGTGATCG...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTATGGCCCGCTTCCAGTaGGAGTCTTTCTGCATGGCA | + |
Preference number: 4 (lower is better) Translates to: HKLAMEDILFTGVSWPEFMARFQ*ESFCMA Trigger: TGCCATGCAGAAAGACTCCCACTGGAAGCGGGCCAT...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGCCAGGTGCAGGACCTTaGAAACCCTTGTGTCCCACA | + |
Preference number: 4 (lower is better) Translates to: GHGRYPFHWGLMARISKKPGAGP*KPLCPT Trigger: TGTGGGACACAAGGGTTTCCAAGGTCCTGCACCTGG...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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3UTR CAA 72 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTaGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACA | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQS*SVPQTWPRPAT Trigger: TGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCGCCCACAGATTTGGGTaGGGATGCTGCTGGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPAHRFG*GCCWGW Trigger: CCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGC...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACGAAGTCTATAATCTCTaGGCGCTCTTCATTGATGGT | + |
Preference number: 4 (lower is better) Translates to: EMADARTGTHFYSLGLQDEVYNL*ALFIDG Trigger: ACCATCAATGAAGAGCGCTCAGAGATTATAGACTTC...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTGTTGTTGAAGACCAGTaGCCACAGCAACCACACGGA | + |
Preference number: 4 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTVVEDQ*PQQPHG Trigger: TCCGTGTGGTTGCTGTGGGCACTGGTCTTCAACAAC...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | CTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAGCATGTCACGATAGTTaGTACGAATGTTCCTCTCTG | + |
Preference number: 4 (lower is better) Translates to: LNLRFQFCVPNPRPQQPQACHDS*YECSSL Trigger: CAGAGAGGAACATTCGTAGCAACTATCGTGACATGC...TTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCTGCCCCAGTTCTCGATaGTACGAGTGGCGCGGTCCA | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPCPSSR*YEWRGP Trigger: TGGACCGCGCCACTCGTACCATCGAGAACTGGGGCA...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGAAGTCTATAATCTCTaGGCGCTCTTCATTGATGGT | + |
Preference number: 4 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWEVYNL*ALFIDG Trigger: ACCATCAATGAAGAGCGCTCAGAGATTATAGACTTC...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCAAGTCCAGGAAGTTCTaGGGGGTGAGACGAGTCCGG | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPKSRKF*GVRRVR Trigger: CCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTT...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | ATGGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAGTAGCGAGGCCATACTaGATACTTCATGTACAGGAC | + |
Preference number: 4 (lower is better) Translates to: MARISKKKAEESKLVCPPVARPY*ILHVQD Trigger: GTCCTGTACATGAAGTATCCAGTATGGCCTCGCTAC...TGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGGAGTCTTTCTGCATaGCAATGCCATAGCCAGTGG | + |
Preference number: 4 (lower is better) Translates to: QNFKEEGRGVKACLSPKLGSLSA*QCHSQW Trigger: CCACTGGCTATGGCATTGCCATGCAGAAAGACTCCC...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | TTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGTCGATGTATTGTTCCTaGATCATGAAGGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: FPILCPQPKATATTTRKWSMYCS*IMKAAR Trigger: TCTGGCAGCCTTCATGATCCAGGAACAATACATCGA...CCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCGCCAAAACGGAAGGGTaGGTATTGGTCTTGAGGCCG | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPAKTEG*VLVLRP Trigger: CGGCCTCAAGACCAATACCCACCCTTCCGTTTTGGC...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR TCA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCAGTCGTAGGAGAACTTaGCCACCTTGGCCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPSRRRT*PPWPAS Trigger: AGAAGCTGGCCAAGGTGGTCAAGTTCTCCTACGACT...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR GCA 90 bp | AGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCATGTCACGATAGTTaGTACGAATGTTCCTCTCTG | + |
Preference number: 4 (lower is better) Translates to: RISKKKAEESKLVCPPNLACHDS*YECSSL Trigger: CAGAGAGGAACATTCGTAGCAACTATCGTGACATGC...CAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | CGCGCATCCCAAGCGTGCCTGCAGGATGCTCGGGACACGTCGGGCTaGGGCGACCCTGCGCAGGTCGCGGGGCGAGCGGGAGGCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: RASQACLQDARDTSG*GDPAQVAGRAGGCG Trigger: CCCGCAGCCTCCCGCTCGCCCCGCGACCTGCGCAGGGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | AGCGCTGAGTGCGCGCTCGCGGCCCACCGGGGCCCAGCTCCAGCGTaGGCACGTCCAGCAGCCGCCAGCTCAGGTAGCTGGCGTCGGCGA | + |
Preference number: 5 (lower is better) Translates to: SAECALAAHRGPAPA*ARPAAASSGSWRRR Trigger: TCGCCGACGCCAGCTACCTGAGCTGGCGGCTGCTGGACGTGCTCACGCTGGAGCTGGGCCCCGGTGGGCCGCGAGCGCGCACTCAGCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | CGCTCCGGGAGCGCGCGCCGCTCGGAGGCCGAGAGGTGCGATCCCTaGTGCCCGACTCGCACTGGCCACCGCGCATCCCAAGCGTGCCTG | + |
Preference number: 5 (lower is better) Translates to: RSGSARRSEAERCDP*CPTRTGHRASQACL Trigger: CAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCGGGCATCAGGGATCGCACCTCTCGGCCTCCGAGCGGCGCGCGCTCCCGGAGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | CCCGACTCGCACTGGCCACCGCGCATCCCAAGCGTGCCTGCAGGATaGTCGGGACACGTCGGGCTGAGGCGACCCTGCGCAGGTCGCGGG | + |
Preference number: 5 (lower is better) Translates to: PDSHWPPRIPSVPAG*SGHVGLRRPCAGRG Trigger: CCCGCGACCTGCGCAGGGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | CCTGATGCCCGACTCGCACTGGCCACCGCGCATCCCAAGCGTGCCTaGAGGATGCTCGGGACACGTCGGGCTGAGGCGACCCTGCGCAGG | + |
Preference number: 5 (lower is better) Translates to: PDARLALATAHPKRA*RMLGTRRAEATLRR Trigger: CCTGCGCAGGGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCGGGCATCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | GTGCAGGCAGACATGCTGTCTGGGCTGCCAGGTGGCGGCCACCCCTaGTGGCACGCCCTCCACACAGGCCTCCCGGTAGGATGGCAGCCG | + |
Preference number: 5 (lower is better) Translates to: VQADMLSGLPGGGHP*WHALHTGLPVGWQP Trigger: CGGCTGCCATCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | TCGGCGACGGCGCGCACGCCCTCGAGGAAGAGCGCGTGGCCCGGGTaGAGGCTGGTGATGACAGCGAACGCGCTCCAGTCGTATTCCTCC | + |
Preference number: 5 (lower is better) Translates to: SATARTPSRKSAWPG*RLVMTANALQSYSS Trigger: GGAGGAATACGACTGGAGCGCGTTCGCTGTCATCACCAGCCTGCACCCGGGCCACGCGCTCTTCCTCGAGGGCGTGCGCGCCGTCGCCGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | GTCCCCCAGCAGAACGGCAGGTGGGTATGGGTGTGCAGGCAGACATaGTGTCTGGGCTGCCAGGTGGCGGCCACCCCTGCTGGCACGCCC | + |
Preference number: 5 (lower is better) Translates to: VPQQNGRWVWVCRQT*CLGCQVAATPAGTP Trigger: GGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACCTGCCGTTCTGCTGGGGGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | AGGGCTGACGGGTCCTGGGTGGCTTCGGCAGTCTCCAGCCGGGGCTaGAAGGGTACCGTACTGGCGTCGGTAGCTGTGGGCACCGAGGGC | + |
Preference number: 5 (lower is better) Translates to: RADGSWVASAVSSRG*KGTVLASVAVGTEG Trigger: GCCCTCGGTGCCCACAGCTACCGACGCCAGTACGGTACCCTTCCAGCCCCGGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAGCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | CCGCTCGGAGGCCGAGAGGTGCGATCCCTGATGCCCGACTCGCACTaGCCACCGCGCATCCCAAGCGTGCCTGCAGGATGCTCGGGACAC | + |
Preference number: 5 (lower is better) Translates to: PLGGREVRSLMPDSH*PPRIPSVPAGCSGH Trigger: GTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCGGGCATCAGGGATCGCACCTCTCGGCCTCCGAGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | CAGGCAGACATGCTGTCTGGGCTGCCAGGTGGCGGCCACCCCTGCTaGCACGCCCTCCACACAGGCCTCCCGGTAGGATGGCAGCCGCAA | + |
Preference number: 5 (lower is better) Translates to: QADMLSGLPGGGHPC*HALHTGLPVGWQPQ Trigger: TTGCGGCTGCCATCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | GGTGGGTATGGGTGTGCAGGCAGACATGCTGTCTGGGCTGCCAGGTaGCGGCCACCCCTGCTGGCACGCCCTCCACACAGGCCTCCCGGT | + |
Preference number: 5 (lower is better) Translates to: GGYGCAGRHAVWAAR*RPPLLARPPHRPPG Trigger: ACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | ATGACCGCGGGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATTGTTaGCCCAGTTCTCGATGGTACGAGTGGCGCGGTCCAAAGAGCCGC | + |
Preference number: 5 (lower is better) Translates to: MTAGRRWWEQARGDC*PSSRWYEWRGPKSR Trigger: GCGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCCGCGGTCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | ACCGGTACACCTGGCAGGCAGAGGGTTGGATCGAGTGAAGGCTTCTaGCACGGAGCTGGGCAGGGAAGCGTGCCGAGGGCGCGGGCCCCT | + |
Preference number: 5 (lower is better) Translates to: TGTPGRQRVGSSEGF*HGAGQGSVPRARAP Trigger: AGGGGCCCGCGCCCTCGGCACGCTTCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGATCCAACCCTCTGCCTGCCAGGTGTACCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | AACGGCAGGTGGGTATGGGTGTGCAGGCAGACATGCTGTCTGGGCTaGCAGGTGGCGGCCACCCCTGCTGGCACGCCCTCCACACAGGCC | + |
Preference number: 5 (lower is better) Translates to: NGRWVWVCRQTCCLG*QVAATPAGTPSTQA Trigger: GGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACCTGCCGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | GGCCACCCCTGCTGGCACGCCCTCCACACAGGCCTCCCGGTAGGATaGCAGCCGCAACGACTGTGTTTGAGCCACGTGCCGGCAGGATGG | + |
Preference number: 5 (lower is better) Translates to: GHPCWHALHTGLPVG*QPQRLCLSHVPAGW Trigger: CCATCCTGCCGGCACGTGGCTCAAACACAGTCGTTGCGGCTGCCATCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | CGCAGGCGTGACCGGTACACCTGGCAGGCAGAGGGTTGGATCGAGTaGAGGCTTCTGCCACGGAGCTGGGCAGGGAAGCGTGCCGAGGGC | + |
Preference number: 5 (lower is better) Translates to: RRRDRYTWQAEGWIE*RLLPRSWAGKRAEG Trigger: GCCCTCGGCACGCTTCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGATCCAACCCTCTGCCTGCCAGGTGTACCGGTCACGCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | AAGTCCAGGAAGTTCTGCGGGGTGAGACGAGTCCGGGCCTGGGCCTaGAGTGGCCCAGAGCTGCCAAACACCACCGCCACGGTCACGGCC | + |
Preference number: 5 (lower is better) Translates to: KSRKFCGVRRVRAWA*SGPELPNTTATVTA Trigger: GGCCGTGACCGTGGCGGTGGTGTTTGGCAGCTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | AGCAGAACGGCAGGTGGGTATGGGTGTGCAGGCAGACATGCTGTCTaGGCTGCCAGGTGGCGGCCACCCCTGCTGGCACGCCCTCCACAC | + |
Preference number: 5 (lower is better) Translates to: SRTAGGYGCAGRHAV*AARWRPPLLARPPH Trigger: GTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACCTGCCGTTCTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | AGAGGCAAGTCCAGGAAGTTCTGCGGGGTGAGACGAGTCCGGGCCTaGGCCTGCAGTGGCCCAGAGCTGCCAAACACCACCGCCACGGTC | + |
Preference number: 5 (lower is better) Translates to: RGKSRKFCGVRRVRA*ACSGPELPNTTATV Trigger: GACCGTGGCGGTGGTGTTTGGCAGCTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTTGCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | AGGTGGTGGGAGCAGGCGCGCGGCGATTGTTGCCCCAGTTCTCGATaGTACGAGTGGCGCGGTCCAAAGAGCCGCTCACGTCCGCTGTGC | + |
Preference number: 5 (lower is better) Translates to: RWWEQARGDCCPSSR*YEWRGPKSRSRPLC Trigger: GCACAGCGGACGTGAGCGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | CCAGAGCTGCCAAACACCACCGCCACGGTCACGGCCTGTTCTCCCTaGCCTGCGCCCAGCCCTGCCCAAGCACCAAGGAGTGAAGTGAGA | + |
Preference number: 5 (lower is better) Translates to: PELPNTTATVTACSP*PAPSPAQAPRSEVR Trigger: TCTCACTTCACTCCTTGGTGCTTGGGCAGGGCTGGGCGCAGGGCAGGGAGAACAGGCCGTGACCGTGGCGGTGGTGTTTGGCAGCTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | CCGATGGTGAGTGGCTGGATCTCCAGAGGCAAGTCCAGGAAGTTCTaGGGGGTGAGACGAGTCCGGGCCTGGGCCTGCAGTGGCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: PMVSGWISRGKSRKF*GVRRVRAWACSGPE Trigger: CTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTTGCCTCTGGAGATCCAGCCACTCACCATCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | CAGCAGATGCCTGTAGAAAGCCTCCCTGGCAGGGCTGACGGGTCCTaGGTGGCTTCGGCAGTCTCCAGCCGGGGCTGGAAGGGTACCGTA | + |
Preference number: 5 (lower is better) Translates to: QQMPVESLPGRADGS*VASAVSSRGWKGTV Trigger: TACGGTACCCTTCCAGCCCCGGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAGCCCTGCCAGGGAGGCTTTCTACAGGCATCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | GAGCAGGCGCGCGGCGATTGTTGCCCCAGTTCTCGATGGTACGAGTaGCGCGGTCCAAAGAGCCGCTCACGTCCGCTGTGCTCACCATGT | + |
Preference number: 5 (lower is better) Translates to: EQARGDCCPSSRWYE*RGPKSRSRPLCSPC Trigger: ACATGGTGAGCACAGCGGACGTGAGCGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | CCCCATGATCCCACCGTCCCACCATCTCCCAGAGGCGATGCCGGTTaGGAGCGATCACAACCATTGTGGGCTGGACCAGGTACCCACCAG | + |
Preference number: 5 (lower is better) Translates to: PHDPTVPPSPRGDAG*ERSQPLWAGPGTHQ Trigger: CTGGTGGGTACCTGGTCCAGCCCACAATGGTTGTGATCGCTCTCAACCGGCATCGCCTCTGGGAGATGGTGGGACGGTGGGATCATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 90 bp | CAAGTTCCAATGAGCCAGGGACTGTGGCTGGAACAGGGTGGAGGGTaGCGGCAGACAGTCCCCCAGCAGAACGGCAGGTGGGTATGGGTG | + |
Preference number: 5 (lower is better) Translates to: QVPMSQGLWLEQGGG*RQTVPQQNGRWVWV Trigger: CACCCATACCCACCTGCCGTTCTGCTGGGGGACTGTCTGCCGTCACCCTCCACCCTGTTCCAGCCACAGTCCCTGGCTCATTGGAACTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | CGATGGTACGAGTGGCGCGGTCCAAAGAGCCGCTCACGTCCGCTGTaGTCACCATGTCTCGAGCCGCCTGCAGCATCTTCAGCACATTGG | + |
Preference number: 5 (lower is better) Translates to: RWYEWRGPKSRSRPL*SPCLEPPAASSAHW Trigger: CCAATGTGCTGAAGATGCTGCAGGCGGCTCGAGACATGGTGAGCACAGCGGACGTGAGCGGCTCTTTGGACCGCGCCACTCGTACCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | CTGTGGGCACCGAGGGCCAGAATGGCTACACCGTCGCGGACTTTCTaGCGTAGGCTAAGGCGCCAACTCTCGGTGACCACACTGATGAGG | + |
Preference number: 5 (lower is better) Translates to: LWAPRARMATPSRTF*RRLRRQLSVTTLMR Trigger: CCTCATCAGTGTGGTCACCGAGAGTTGGCGCCTTAGCCTACGCCAGAAAGTCCGCGACGGTGTAGCCATTCTGGCCCTCGGTGCCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 90 bp | AAAGAGCCGCTCACGTCCGCTGTGCTCACCATGTCTCGAGCCGCCTaGAGCATCTTCAGCACATTGGCCTGGGCTGAGCCTGCTGTAAGG | + |
Preference number: 5 (lower is better) Translates to: KEPLTSAVLTMSRAA*SIFSTLAWAEPAVR Trigger: CCTTACAGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGCTGCAGGCGGCTCGAGACATGGTGAGCACAGCGGACGTGAGCGGCTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | AAGACGATGCCGTGGACTCGGGCGGCACCCAGGAGCCCACAGATTTaGGTGAGGATGCTGCTGGGGTTGGTATTGTTGACCCCGATGGTG | + |
Preference number: 5 (lower is better) Translates to: KTMPWTRAAPRSPQI*VRMLLGLVLLTPMV Trigger: CACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTGGGTGCCGCCCGAGTCCACGGCATCGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGGCGGAGCCTGGCTCCTaGGGGGTGAGGACCACAGCA | + |
Preference number: 5 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKAEPGS*GVRTTA Trigger: TGCTGTGGTCCTCACCCCCAAGGAGCCAGGCTCCGC...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | TCCCAGAGGCGATGCCGGTTGAGAGCGATCACAACCATTGTGGGCTaGACCAGGTACCCACCAGGGCTAAAAGAGAAGTCTCGGCCTTCC | + |
Preference number: 5 (lower is better) Translates to: SQRRCRLRAITTIVG*TRYPPGLKEKSRPS Trigger: GGAAGGCCGAGACTTCTCTTTTAGCCCTGGTGGGTACCTGGTCCAGCCCACAATGGTTGTGATCGCTCTCAACCGGCATCGCCTCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAGCGGAGCCTGGCTCCTaGGGGGTGAGGACCACAGCA | + |
Preference number: 5 (lower is better) Translates to: LNLRFQFCVPNPRPQQPQAEPGS*GVRTTA Trigger: TGCTGTGGTCCTCACCCCCAAGGAGCCAGGCTCCGC...TTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACGAGCGATCACAACCATaGTGGGCTGGACCAGGTACC | + |
Preference number: 5 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYERSQP*WAGPGT Trigger: GGTACCTGGTCCAGCCCACAATGGTTGTGATCGCTC...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACACCAGGACCATGATCTaGCTGGTGGTGCCCCGGGGG | + |
Preference number: 5 (lower is better) Translates to: EMADARTGTHFYSLGLQDTRTMI*LVVPRG Trigger: CCCCCGGGGCACCACCAGCAAGATCATGGTCCTGGT...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACAGCATCTTCAGCACATaGGCCTGGGCTGAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYSIFST*AWAEPA Trigger: AGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGCT...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGACTGCTGAAGGTGTGGTaGCTCTGTCTACGGCAGGGC | + |
Preference number: 5 (lower is better) Translates to: AEESKLVCPPNLAKTSHRLLKVW*LCLRQG Trigger: GCCCTGCCGTAGACAGAGCAACCACACCTTCAGCAG...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCAGCCACAGAACCCTCTTGCCGTGCTaGCCGTTGGTCACCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: AEESKLVCPPNLAKTSHRTLLPC*PLVTRY Trigger: GTACCTGGTGACCAACGGCAAGCACGGCAAGAGGGT...TCTGTGGCTGGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACGGGGAGACGGTGCCGTaGCTCCTTGCCACCATCACA | + |
Preference number: 5 (lower is better) Translates to: EMADARTGTHFYSLGLQDGETVP*LLATIT Trigger: TGTGATGGTGGCAAGGAGCAACGGCACCGTCTCCCC...GTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTGGCCAAGACCAGCCACAGAATCCAGTCCAGCAGGAACCAGAGCTGCCGGTACACGGAAGGGTGGGTATaGGTCTTGAGGCCGCTGAAA | + |
Preference number: 5 (lower is better) Translates to: LAKTSHRIQSSRNQSCRYTEGWV*VLRPLK Trigger: TTTCAGCGGCCTCAAGACCAATACCCACCCTTCCGT...GTACCGGCAGCTCTGGTTCCTGCTGGACTGGATTCTGTGGCTGGTCTTGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ACTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAGCAGGATGGCCGGCTTaGGGGACATGGGCAAGCGCA | + |
Preference number: 5 (lower is better) Translates to: TQPPFPILCPQPKATATTAGWPA*GTWASA Trigger: TGCGCTTGCCCATGTCCCCAAAGCCGGCCATCCTGC...TGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGCAGGATGGCCGGCTTaGGGGACATGGGCAAGCGCA | + |
Preference number: 5 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGAGWPA*GTWASA Trigger: TGCGCTTGCCCATGTCCCCAAAGCCGGCCATCCTGC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 90 bp | GCTGTCCACCACAGGCTGCAGAGAAGTGCTGTAGCGAGGCCATACTaGATACTTCATGTACAGGACCCCATGATCCCACCGTCCCACCAT | + |
Preference number: 5 (lower is better) Translates to: AVHHRLQRSAVARPY*ILHVQDPMIPPSHH Trigger: ATGGTGGGACGGTGGGATCATGGGGTCCTGTACATGAAGTATCCAGTATGGCCTCGCTACAGCACTTCTCTGCAGCCTGTGGTGGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCCTCTTGCCGTGCTaGCCGTTGGTCACCAGGTAC | + |
Preference number: 5 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKTLLPC*PLVTRY Trigger: GTACCTGGTGACCAACGGCAAGCACGGCAAGAGGGT...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCCAATGGTGACCAGCTaGCAGCCTTCGTCCTTGCCC | + |
Preference number: 5 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHPMVTS*QPSSLP Trigger: GGGCAAGGACGAAGGCTGCAAGCTGGTCACCATTGG...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CTCAACCTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAAACACCACGAACCCTCTaGCCGTGCTTGCCGTTGGTC | + |
Preference number: 5 (lower is better) Translates to: LNLRFQFCVPNPRPQQPQTPRTL*PCLPLV Trigger: GACCAACGGCAAGCACGGCAAGAGGGTTCGTGGTGT...TTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAGGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCACCAGGACCATGATCTaGCTGGTGGTGCCCCGGGGG | + |
Preference number: 5 (lower is better) Translates to: ISKKKAEESKLVCPPNLATRTMI*LVVPRG Trigger: CCCCCGGGGCACCACCAGCAAGATCATGGTCCTGGT...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCTGCTGGGGTTGGTATaGTTGACCCCGATGGTGAGT | + |
Preference number: 5 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHLLGLV*LTPMVS Trigger: ACTCACCATCGGGGTCAACAATACCAACCCCAGCAG...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACAGGATGCTGCTGGGGTaGGTATTGTTGACCCCGATG | + |
Preference number: 5 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHRMLLG*VLLTPM Trigger: CATCGGGGTCAACAATACCAACCCCAGCAGCATCCT...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAACTGCTGAAGGTGTGGTaGCTCTGTCTACGGCAGGGC | + |
Preference number: 5 (lower is better) Translates to: GHKLAMEDILFTGVSWPELLKVW*LCLRQG Trigger: GCCCTGCCGTAGACAGAGCAACCACACCTTCAGCAG...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCACACCACGAACCCTCTaGCCGTGCTTGCCGTTGGTC | + |
Preference number: 5 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGTPRTL*PCLPLV Trigger: GACCAACGGCAAGCACGGCAAGAGGGTTCGTGGTGT...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACTTCAACGGAAGGGTGGGTATaGGTCTTGAGGCCGCTGAAA | + |
Preference number: 5 (lower is better) Translates to: WLTPGQGHIFTPWDCKTSTEGWV*VLRPLK Trigger: TTTCAGCGGCCTCAAGACCAATACCCACCCTTCCGT...TGAAGTCTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACGGACCTTGGAAACCCTaGTGTCCCACAAGCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHGPWKP*CPTSFP Trigger: AGGGAAGCTTGTGGGACACAAGGGTTTCCAAGGTCC...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGACCTTGGCCAGCTTCTaGAGGATGTCGATGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKTLASF*RMSMQK Trigger: CTTCTGCATCGACATCCTCAAGAAGCTGGCCAAGGT...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGGACTGCAAGTCGATGGGAACAGAGTaGTTGAAGACCAGTGCCCAC | + |
Preference number: 5 (lower is better) Translates to: RKWLTPGQGHIFTPWDCKSMGTE*LKTSAH Trigger: GTGGGCACTGGTCTTCAACAACTCTGTTCCCATCGA...CTTGCAGTCCCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGGACCTTGGAAACCCTaGTGTCCCACAAGCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGGPWKP*CPTSFP Trigger: AGGGAAGCTTGTGGGACACAAGGGTTTCCAAGGTCC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGCTCCAGGTGCAGGACCTaGGAAACCCTTGTGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: FQFCVPNPRPQQPQLGNGSRCRT*ETLVSH Trigger: GTGGGACACAAGGGTTTCCAAGGTCCTGCACCTGGA...GCCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGCAGGAGCCCACAGATTaGGGTGAGGATGCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: GHGRYPFHWGLMARISKKQEPTD*GEDAAG Trigger: CCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTG...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGGCCTCAGTGTCCACGTaGTCCTCAAAGACGATGCCG | + |
Preference number: 5 (lower is better) Translates to: FPILCPQPKATATTTRKWASVST*SSKTMP Trigger: CGGCATCGTCTTTGAGGACAACGTGGACACTGAGGC...CCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCAAGACCACCTTGGCCAGCTTCTaGAGGATGTCGATGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: KKKAEESKLVCPPNLAKTTLASF*RMSMQK Trigger: CTTCTGCATCGACATCCTCAAGAAGCTGGCCAAGGT...GGTCTTGGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CTCCGTTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAGAGAACTTGACCACCTaGGCCAGCTTCTTGAGGATG | + |
Preference number: 5 (lower is better) Translates to: LRFQFCVPNPRPQQPQLGENLTT*ASFLRM Trigger: CATCCTCAAGAAGCTGGCCAAGGTGGTCAAGTTCTC...TCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAACGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCCAATGGTGACCAGCTaGCAGCCTTCGTCCTTGCCC | + |
Preference number: 5 (lower is better) Translates to: HKLAMEDILFTGVSWPEFPMVTS*QPSSLP Trigger: GGGCAAGGACGAAGGCTGCAAGCTGGTCACCATTGG...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAGTGGTGGCAAAGACTTaGCCAGACCCAATGGTGACC | + |
Preference number: 5 (lower is better) Translates to: GHKLAMEDILFTGVSWPEVVAKT*PDPMVT Trigger: GGTCACCATTGGGTCTGGCAAAGTCTTTGCCACCAC...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCCTGCTGGGGTTGGTATaGTTGACCCCGATGGTGAGT | + |
Preference number: 5 (lower is better) Translates to: ISKKKAEESKLVCPPNLALLGLV*LTPMVS Trigger: ACTCACCATCGGGGTCAACAATACCAACCCCAGCAG...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGGCCTCAGTGTCCACGTaGTCCTCAAAGACGATGCCG | + |
Preference number: 5 (lower is better) Translates to: GHGRYPFHWGLMARISKKASVST*SSKTMP Trigger: CGGCATCGTCTTTGAGGACAACGTGGACACTGAGGC...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTGAGCGATCACAACCATaGTGGGCTGGACCAGGTACC | + |
Preference number: 5 (lower is better) Translates to: HKLAMEDILFTGVSWPEFERSQP*WAGPGT Trigger: GGTACCTGGTCCAGCCCACAATGGTTGTGATCGCTC...AAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGTCATAAGCTGGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAAAGCAACCACACGGACTaGCCAATGGTGAAGGATGGT | + |
Preference number: 5 (lower is better) Translates to: GHKLAMEDILFTGVSWPESNHTD*PMVKDG Trigger: ACCATCCTTCACCATTGGCAAGTCCGTGTGGTTGCT...TTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCCAGCTTATGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTACTCCCTGGGACTGCAAGACTTCACGTGATGAGCAAGATCCCAGCCCACACCACAGTGTCGATGTATaGTTCCTGGATCATGAAGGC | + |
Preference number: 5 (lower is better) Translates to: FTPWDCKTSRDEQDPSPHHSVDV*FLDHEG Trigger: GCCTTCATGATCCAGGAACAATACATCGACACTGTG...GTGTGGGCTGGGATCTTGCTCATCACGTGAAGTCTTGCAGTCCCAGGGAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCCGTGGTGGCAAAGACTTaGCCAGACCCAATGGTGACC | + |
Preference number: 5 (lower is better) Translates to: ISKKKAEESKLVCPPNLAVVAKT*PDPMVT Trigger: GGTCACCATTGGGTCTGGCAAAGTCTTTGCCACCAC...GGCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | GGCCATGGAAGATATCCTTTTCACTGGGGTCTCATGGCCAGAATTTCAAAGAAGAGCATCTTCAGCACATaGGCCTGGGCTGAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: GHGRYPFHWGLMARISKKSIFST*AWAEPA Trigger: AGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGCT...CTTCTTTGAAATTCTGGCCATGAGACCCCAGTGAAAAGGATATCTTCCATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTGGCAGGATGCTGCTGGGGTaGGTATTGTTGACCCCGATG | + |
Preference number: 5 (lower is better) Translates to: NFKEEGRGVKACLSPKLGRMLLG*VLLTPM Trigger: CATCGGGGTCAACAATACCAACCCCAGCAGCATCCT...GCCAAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | AATGTTCCTATGAAAAGAAATTCCAACCAATTGGAGCAAAAGGTGAGTTGGCCCGGGGAGACGGTGCCGTaGCTCCTTGCCACCATCACA | + |
Preference number: 5 (lower is better) Translates to: NVPMKRNSNQLEQKVSWPGETVP*LLATIT Trigger: TGTGATGGTGGCAAGGAGCAACGGCACCGTCTCCCC...GGGCCAACTCACCTTTTGCTCCAATTGGTTGGAATTTCTTTTCATAGGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ATGGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAGCAACCACACGGACTaGCCAATGGTGAAGGATGGT | + |
Preference number: 5 (lower is better) Translates to: MARISKKKAEESKLVCPPSNHTD*PMVKDG Trigger: ACCATCCTTCACCATTGGCAAGTCCGTGTGGTTGCT...TGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | TTTCCAATTTTGTGTCCCCAACCCAAGGCCACAGCAACCACAACTAGGAAATGGTCGATGGGAACAGAGTaGTTGAAGACCAGTGCCCAC | + |
Preference number: 5 (lower is better) Translates to: FPILCPQPKATATTTRKWSMGTE*LKTSAH Trigger: GTGGGCACTGGTCTTCAACAACTCTGTTCCCATCGA...CCATTTCCTAGTTGTGGTTGCTGTGGCCTTGGGTTGGGGACACAAAATTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ACCACAACTAGGAAATGGCTGACGCCAGGACAGGGACACATTTTTACTCCCTGGCACAGTGTCGATGTATaGTTCCTGGATCATGAAGGC | + |
Preference number: 5 (lower is better) Translates to: TTTRKWLTPGQGHIFTPWHSVDV*FLDHEG Trigger: GCCTTCATGATCCAGGAACAATACATCGACACTGTG...CCAGGGAGTAAAAATGTGTCCCTGTCCTGGCGTCAGCCATTTCCTAGTTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | ATGGCCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAGGGTGGGTATTGGTCTaGAGGCCGCTGAAACTTCTT | + |
Preference number: 5 (lower is better) Translates to: MARISKKKAEESKLVCPPGWVLV*RPLKLL Trigger: AAGAAGTTTCAGCGGCCTCAAGACCAATACCCACCC...TGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTTTCCAGGTGCAGGACCTaGGAAACCCTTGTGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: QNFKEEGRGVKACLSPKLSRCRT*ETLVSH Trigger: GTGGGACACAAGGGTTTCCAAGGTCCTGCACCTGGA...AAGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS-3UTR CAA 90 bp | CCAGAATTTCAAAGAAGAAGGCAGAGGAGTCAAAGCTTGTCTGTCCCCCAAACTGGGTGGGTATTGGTCTaGAGGCCGCTGAAACTTCTT | + |
Preference number: 5 (lower is better) Translates to: PEFQRRRQRSQSLSVPQTGWVLV*RPLKLL Trigger: AAGAAGTTTCAGCGGCCTCAAGACCAATACCCACCC...AGTTTGGGGGACAGACAAGCTTTGACTCCTCTGCCTTCTTCTTTGAAATTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | TGCGCGCTCGCGGCCCACCGGGGCCCAGCTCCAGCGTaGGCACGTCCAGCAGCCGCCAGCTCAGGTAGCTGG | + |
Preference number: 6 (lower is better) Translates to: CALAAHRGPAPA*ARPAAASSGSW Trigger: CCAGCTACCTGAGCTGGCGGCTGCTGGACGTGCTCACGCTGGAGCTGGGCCCCGGTGGGCCGCGAGCGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
||
CDS TCA 72 bp | CAAGCGTGCCTGCAGGATGCTCGGGACACGTCGGGCTaGGGCGACCCTGCGCAGGTCGCGGGGCGAGCGGGA | + |
Preference number: 6 (lower is better) Translates to: QACLQDARDTSG*GDPAQVAGRAG Trigger: TCCCGCTCGCCCCGCGACCTGCGCAGGGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | TCGGCGACGGCGCGCACGCCCTCGAGGAAGAGCGCGTaGCCCGGGTGCAGGCTGGTGATGACAGCGAACGCG | + |
Preference number: 6 (lower is better) Translates to: SATARTPSRKSA*PGCRLVMTANA Trigger: CGCGTTCGCTGTCATCACCAGCCTGCACCCGGGCCACGCGCTCTTCCTCGAGGGCGTGCGCGCCGTCGCCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | AGCGCGCGCCGCTCGGAGGCCGAGAGGTGCGATCCCTaGTGCCCGACTCGCACTGGCCACCGCGCATCCCAA | + |
Preference number: 6 (lower is better) Translates to: SARRSEAERCDP*CPTRTGHRASQ Trigger: TTGGGATGCGCGGTGGCCAGTGCGAGTCGGGCATCAGGGATCGCACCTCTCGGCCTCCGAGCGGCGCGCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | GCGCGCACGCCCTCGAGGAAGAGCGCGTGGCCCGGGTaGAGGCTGGTGATGACAGCGAACGCGCTCCAGTCG | + |
Preference number: 6 (lower is better) Translates to: ARTPSRKSAWPG*RLVMTANALQS Trigger: CGACTGGAGCGCGTTCGCTGTCATCACCAGCCTGCACCCGGGCCACGCGCTCTTCCTCGAGGGCGTGCGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GAGGACCCGGGGTGCATGACCGCGGGCCGGAGGTGGTaGGAGCAGGCGCGCGGCGATTGTTGCCCCAGTTCT | + |
Preference number: 6 (lower is better) Translates to: EDPGCMTAGRRW*EQARGDCCPSS Trigger: AGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCCGCGGTCATGCACCCCGGGTCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | CGCGGGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATaGTTGCCCCAGTTCTCGATGGTACGAGTGGCGCGG | + |
Preference number: 6 (lower is better) Translates to: RGPEVVGAGARR*LPQFSMVRVAR Trigger: CCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | CACTGGCCACCGCGCATCCCAAGCGTGCCTGCAGGATaGTCGGGACACGTCGGGCTGAGGCGACCCTGCGCA | + |
Preference number: 6 (lower is better) Translates to: HWPPRIPSVPAG*SGHVGLRRPCA Trigger: TGCGCAGGGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | CGACTCGCACTGGCCACCGCGCATCCCAAGCGTGCCTaGAGGATGCTCGGGACACGTCGGGCTGAGGCGACC | + |
Preference number: 6 (lower is better) Translates to: RLALATAHPKRA*RMLGTRRAEAT Trigger: GGTCGCCTCAGCCCGACGTGTCCCGAGCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | GACATGCTGTCTGGGCTGCCAGGTGGCGGCCACCCCTaGTGGCACGCCCTCCACACAGGCCTCCCGGTAGGA | + |
Preference number: 6 (lower is better) Translates to: DMLSGLPGGGHP*WHALHTGLPVG Trigger: TCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | ATGCTGTCTGGGCTGCCAGGTGGCGGCCACCCCTGCTaGCACGCCCTCCACACAGGCCTCCCGGTAGGATGG | + |
Preference number: 6 (lower is better) Translates to: MLSGLPGGGHPC*HALHTGLPVGW Trigger: CCATCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GGGTGTGCAGGCAGACATGCTGTCTGGGCTGCCAGGTaGCGGCCACCCCTGCTGGCACGCCCTCCACACAGG | + |
Preference number: 6 (lower is better) Translates to: GCAGRHAVWAAR*RPPLLARPPHR Trigger: CCTGTGTGGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | GGGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATTGTaGCCCCAGTTCTCGATGGTACGAGTGGCGCGGTCC | + |
Preference number: 6 (lower is better) Translates to: GPEVVGAGARRL*PQFSMVRVARS Trigger: GGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | CATGACCGCGGGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATTGTaGCCCCAGTTCTCGATGGTACGAGTGGCGCGGTCCAAAGAGCCG | + |
Preference number: 6 (lower is better) Translates to: HDRGPEVVGAGARRL*PQFSMVRVARSKEP Trigger: CGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCCGCGGTCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | GGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATTGTTaGCCCAGTTCTCGATGGTACGAGTGGCGCGGTCCA | + |
Preference number: 6 (lower is better) Translates to: GRRWWEQARGDC*PSSRWYEWRGP Trigger: TGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | TGGGTATGGGTGTGCAGGCAGACATGCTGTCTGGGCTaGCAGGTGGCGGCCACCCCTGCTGGCACGCCCTCC | + |
Preference number: 6 (lower is better) Translates to: WVWVCRQTCCLG*QVAATPAGTPS Trigger: GGAGGGCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GGGTCCTGGGTGGCTTCGGCAGTCTCCAGCCGGGGCTaGAAGGGTACCGTACTGGCGTCGGTAGCTGTGGGC | + |
Preference number: 6 (lower is better) Translates to: GSWVASAVSSRG*KGTVLASVAVG Trigger: GCCCACAGCTACCGACGCCAGTACGGTACCCTTCCAGCCCCGGCTGGAGACTGCCGAAGCCACCCAGGACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GGCCGAGAGGTGCGATCCCTGATGCCCGACTCGCACTaGCCACCGCGCATCCCAAGCGTGCCTGCAGGATGC | + |
Preference number: 6 (lower is better) Translates to: GREVRSLMPDSH*PPRIPSVPAGC Trigger: GCATCCTGCAGGCACGCTTGGGATGCGCGGTGGCCAGTGCGAGTCGGGCATCAGGGATCGCACCTCTCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GCAGGTGGGTATGGGTGTGCAGGCAGACATGCTGTCTaGGCTGCCAGGTGGCGGCCACCCCTGCTGGCACGC | + |
Preference number: 6 (lower is better) Translates to: AGGYGCAGRHAV*AARWRPPLLAR Trigger: GCGTGCCAGCAGGGGTGGCCGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | GTGCATGACCGCGGGCCGGAGGTGGTGGGAGCAGGCGCGCGGCGATaGTTGCCCCAGTTCTCGATGGTACGAGTGGCGCGGTCCAAAGAG | + |
Preference number: 6 (lower is better) Translates to: VHDRGPEVVGAGARR*LPQFSMVRVARSKE Trigger: CTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTCCCACCACCTCCGGCCCGCGGTCATGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | CCTGGCAGGCAGAGGGTTGGATCGAGTGAAGGCTTCTaGCACGGAGCTGGGCAGGGAAGCGTGCCGAGGGCG | + |
Preference number: 6 (lower is better) Translates to: PGRQRVGSSEGF*HGAGQGSVPRA Trigger: CGCCCTCGGCACGCTTCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGATCCAACCCTCTGCCTGCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CCTGTAGAAAGCCTCCCTGGCAGGGCTGACGGGTCCTaGGTGGCTTCGGCAGTCTCCAGCCGGGGCTGGAAG | + |
Preference number: 6 (lower is better) Translates to: PVESLPGRADGS*VASAVSSRGWK Trigger: CTTCCAGCCCCGGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAGCCCTGCCAGGGAGGCTTTCTACAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | GCTGTGCTCACCATGTCTCGAGCCGCCTGCAGCATCTTCAGCACATaGGCCTGGGCTGAGCCTGCTGTAAGGTCCGGGCTGGGCGGCCGC | + |
Preference number: 6 (lower is better) Translates to: AVLTMSRAACSIFST*AWAEPAVRSGLGGR Trigger: GCGGCCGCCCAGCCCGGACCTTACAGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGCTGCAGGCGGCTCGAGACATGGTGAGCACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | CCGCAACGACTGTGTTTGAGCCACGTGCCGGCAGGATGGCCGGCTTaGGGGACATGGGCAAGCGCAGGCGTGACCGGTACACCTGGCAGG | + |
Preference number: 6 (lower is better) Translates to: PQRLCLSHVPAGWPA*GTWASAGVTGTPGR Trigger: CCTGCCAGGTGTACCGGTCACGCCTGCGCTTGCCCATGTCCCCAAAGCCGGCCATCCTGCCGGCACGTGGCTCAAACACAGTCGTTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | GGATCTCCAGAGGCAAGTCCAGGAAGTTCTGCGGGGTaGGACGAGTCCGGGCCTGGGCCTGCAGTGGCCCAG | + |
Preference number: 6 (lower is better) Translates to: GSPEASPGSSAG*DESGPGPAVAQ Trigger: CTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCTCACCCCGCAGAACTTCCTGGACTTGCCTCTGGAGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | TCCAGGAAGTTCTGCGGGGTGAGACGAGTCCGGGCCTaGGCCTGCAGTGGCCCAGAGCTGCCAAACACCACC | + |
Preference number: 6 (lower is better) Translates to: SRKFCGVRRVRA*ACSGPELPNTT Trigger: GGTGGTGTTTGGCAGCTCTGGGCCACTGCAGGCCCAGGCCCGGACTCGTCTCACCCCGCAGAACTTCCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | TGCTGGCACGCCCTCCACACAGGCCTCCCGGTAGGATaGCAGCCGCAACGACTGTGTTTGAGCCACGTGCCG | + |
Preference number: 6 (lower is better) Translates to: CWHALHTGLPVG*QPQRLCLSHVP Trigger: CGGCACGTGGCTCAAACACAGTCGTTGCGGCTGCCATCCTACCGGGAGGCCTGTGTGGAGGGCGTGCCAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | TCAGCAGATGCCTGTAGAAAGCCTCCCTGGCAGGGCTaGCGGGTCCTGGGTGGCTTCGGCAGTCTCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: SADACRKPPWQG*RVLGGFGSLQP Trigger: CGGCTGGAGACTGCCGAAGCCACCCAGGACCCGTCAGCCCTGCCAGGGAGGCTTTCTACAGGCATCTGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | GATGGCCGGCTTTGGGGACATGGGCAAGCGCAGGCGTaGCCGGTACACCTGGCAGGCAGAGGGTTGGATCGA | + |
Preference number: 6 (lower is better) Translates to: DGRLWGHGQAQA*PVHLAGRGLDR Trigger: TCGATCCAACCCTCTGCCTGCCAGGTGTACCGGTCACGCCTGCGCTTGCCCATGTCCCCAAAGCCGGCCATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | CCACGGCCTCAGTGTCCACGTTGTCCTCAAAGACGATaGCGTGGACTCGGGCGGCACCCAGGAGCCCACAGA | + |
Preference number: 6 (lower is better) Translates to: PRPQCPRCPQRR*RGLGRHPGAHR Trigger: TCTGTGGGCTCCTGGGTGCCGCCCGAGTCCACGGCATCGTCTTTGAGGACAACGTGGACACTGAGGCCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | ACAGTCCCCCAGCAGAACGGCAGGTGGGTATGGGTGTaGAGGCAGACATGCTGTCTGGGCTGCCAGGTGGCG | + |
Preference number: 6 (lower is better) Translates to: TVPQQNGRWVWV*RQTCCLGCQVA Trigger: CGCCACCTGGCAGCCCAGACAGCATGTCTGCCTGCACACCCATACCCACCTGCCGTTCTGCTGGGGGACTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CGCGGCGATTGTTGCCCCAGTTCTCGATGGTACGAGTaGCGCGGTCCAAAGAGCCGCTCACGTCCGCTGTGC | + |
Preference number: 6 (lower is better) Translates to: RGDCCPSSRWYE*RGPKSRSRPLC Trigger: GCACAGCGGACGTGAGCGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GAGCAGGCGCGCGGCGATTGTTGCCCCAGTTCTCGATaGTACGAGTGGCGCGGTCCAAAGAGCCGCTCACGT | + |
Preference number: 6 (lower is better) Translates to: EQARGDCCPSSR*YEWRGPKSRSR Trigger: ACGTGAGCGGCTCTTTGGACCGCGCCACTCGTACCATCGAGAACTGGGGCAACAATCGCCGCGCGCCTGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | CTGTGTTTGAGCCACGTGCCGGCAGGATGGCCGGCTTaGGGGACATGGGCAAGCGCAGGCGTGACCGGTACA | + |
Preference number: 6 (lower is better) Translates to: LCLSHVPAGWPA*GTWASAGVTGT Trigger: TGTACCGGTCACGCCTGCGCTTGCCCATGTCCCCAAAGCCGGCCATCCTGCCGGCACGTGGCTCAAACACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | GACCGGTACACCTGGCAGGCAGAGGGTTGGATCGAGTaGAGGCTTCTGCCACGGAGCTGGGCAGGGAAGCGT | + |
Preference number: 6 (lower is better) Translates to: DRYTWQAEGWIE*RLLPRSWAGKR Trigger: ACGCTTCCCTGCCCAGCTCCGTGGCAGAAGCCTTCACTCGATCCAACCCTCTGCCTGCCAGGTGTACCGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | GAGTGGCGCGGTCCAAAGAGCCGCTCACGTCCGCTGTaGTCACCATGTCTCGAGCCGCCTGCAGCATCTTCA | + |
Preference number: 6 (lower is better) Translates to: EWRGPKSRSRPL*SPCLEPPAASS Trigger: TGAAGATGCTGCAGGCGGCTCGAGACATGGTGAGCACAGCGGACGTGAGCGGCTCTTTGGACCGCGCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS TCA 72 bp | CCCACCGTCCCACCATCTCCCAGAGGCGATGCCGGTTaGGAGCGATCACAACCATTGTGGGCTGGACCAGGT | + |
Preference number: 6 (lower is better) Translates to: PTVPPSPRGDAG*ERSQPLWAGPG Trigger: ACCTGGTCCAGCCCACAATGGTTGTGATCGCTCTCAACCGGCATCGCCTCTGGGAGATGGTGGGACGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CCGTGGACTCGGGCGGCACCCAGGAGCCCACAGATTTaGGTGAGGATGCTGCTGGGGTTGGTATTGTTGACC | + |
Preference number: 6 (lower is better) Translates to: PWTRAAPRSPQI*VRMLLGLVLLT Trigger: GGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTGGGTGCCGCCCGAGTCCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | GCCTCAGTGTCCACGTTGTCCTCAAAGACGATGCCGTaGACTCGGGCGGCACCCAGGAGCCCACAGATTTGG | + |
Preference number: 6 (lower is better) Translates to: ASVSTLSSKTMP*TRAAPRSPQIW Trigger: CCAAATCTGTGGGCTCCTGGGTGCCGCCCGAGTCCACGGCATCGTCTTTGAGGACAACGTGGACACTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CCGAGGGCCAGAATGGCTACACCGTCGCGGACTTTCTaGCGTAGGCTAAGGCGCCAACTCTCGGTGACCACA | + |
Preference number: 6 (lower is better) Translates to: PRARMATPSRTF*RRLRRQLSVTT Trigger: TGTGGTCACCGAGAGTTGGCGCCTTAGCCTACGCCAGAAAGTCCGCGACGGTGTAGCCATTCTGGCCCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | AGTTCCAATGAGCCAGGGACTGTGGCTGGAACAGGGTaGAGGGTGACGGCAGACAGTCCCCCAGCAGAACGG | + |
Preference number: 6 (lower is better) Translates to: SSNEPGTVAGTG*RVTADSPPAER Trigger: CCGTTCTGCTGGGGGACTGTCTGCCGTCACCCTCCACCCTGTTCCAGCCACAGTCCCTGGCTCATTGGAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | TCCCACCGTCCCACCATCTCCCAGAGGCGATGCCGGTaGAGAGCGATCACAACCATTGTGGGCTGGACCAGG | + |
Preference number: 6 (lower is better) Translates to: SHRPTISQRRCR*RAITTIVGWTR Trigger: CCTGGTCCAGCCCACAATGGTTGTGATCGCTCTCAACCGGCATCGCCTCTGGGAGATGGTGGGACGGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | ACCATGTCTCGAGCCGCCTGCAGCATCTTCAGCACATaGGCCTGGGCTGAGCCTGCTGTAAGGTCCGGGCTG | + |
Preference number: 6 (lower is better) Translates to: TMSRAACSIFST*AWAEPAVRSGL Trigger: CAGCCCGGACCTTACAGCAGGCTCAGCCCAGGCCAATGTGCTGAAGATGCTGCAGGCGGCTCGAGACATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | GCGGCACCCAGGAGCCCACAGATTTGGGTGAGGATGCTGCTGGGGTaGGTATTGTTGACCCCGATGGTGAGTGGCTGGATCTCCAGAGGC | + |
Preference number: 6 (lower is better) Translates to: AAPRSPQIWVRMLLG*VLLTPMVSGWISRG Trigger: GCCTCTGGAGATCCAGCCACTCACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTGGGTGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | AAAGACGATGCCGTGGACTCGGGCGGCACCCAGGAGCCCACAGATTaGGGTGAGGATGCTGCTGGGGTTGGTATTGTTGACCCCGATGGT | + |
Preference number: 6 (lower is better) Translates to: KDDAVDSGGTQEPTD*GEDAAGVGIVDPDG Trigger: ACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTGGGTGCCGCCCGAGTCCACGGCATCGTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | TATTCCTCCAGCACCTTGAACAGCACCTGCAGCTGCTaGTCCAGGGACACGCCCAGCTGTAGAAAGGCGGAG | + |
Preference number: 6 (lower is better) Translates to: YSSSTLNSTCSC*SRDTPSCRKAE Trigger: CTCCGCCTTTCTACAGCTGGGCGTGTCCCTGGAGCAGCAGCTGCAGGTGCTGTTCAAGGTGCTGGAGGAATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | CCCAGGAGCCCACAGATTTGGGTGAGGATGCTGCTGGGGTTGGTATaGTTGACCCCGATGGTGAGTGGCTGGATCTCCAGAGGCAAGTCC | + |
Preference number: 6 (lower is better) Translates to: PRSPQIWVRMLLGLV*LTPMVSGWISRGKS Trigger: GGACTTGCCTCTGGAGATCCAGCCACTCACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 90 bp | AGGAGCCCACAGATTTGGGTGAGGATGCTGCTGGGGTTGGTATTGTaGACCCCGATGGTGAGTGGCTGGATCTCCAGAGGCAAGTCCAGG | + |
Preference number: 6 (lower is better) Translates to: RSPQIWVRMLLGLVL*TPMVSGWISRGKSR Trigger: CCTGGACTTGCCTCTGGAGATCCAGCCACTCACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | AGGAGCCCACAGATTTGGGTGAGGATGCTGCTGGGGTaGGTATTGTTGACCCCGATGGTGAGTGGCTGGATC | + |
Preference number: 6 (lower is better) Translates to: RSPQIWVRMLLG*VLLTPMVSGWI Trigger: GATCCAGCCACTCACCATCGGGGTCAACAATACCAACCCCAGCAGCATCCTCACCCAAATCTGTGGGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS GCA 72 bp | ACACTTCTGATTCCAGGCTGGAGATCCGCCTCCAGGTaGAGGACCTTGGAAACCCTTGTGTCCCACAAGCTT | + |
Preference number: 6 (lower is better) Translates to: TLLIPGWRSASR*RTLETLVSHKL Trigger: AAGCTTGTGGGACACAAGGGTTTCCAAGGTCCTGCACCTGGAGGCGGATCTCCAGCCTGGAATCAGAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CGATGCCGGTTGAGAGCGATCACAACCATTGTGGGCTaGACCAGGTACCCACCAGGGCTAAAAGAGAAGTCT | + |
Preference number: 6 (lower is better) Translates to: RCRLRAITTIVG*TRYPPGLKEKS Trigger: AGACTTCTCTTTTAGCCCTGGTGGGTACCTGGTCCAGCCCACAATGGTTGTGATCGCTCTCAACCGGCATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | CACAGGCTGCAGAGAAGTGCTGTAGCGAGGCCATACTaGATACTTCATGTACAGGACCCCATGATCCCACCG | + |
Preference number: 6 (lower is better) Translates to: HRLQRSAVARPY*ILHVQDPMIPP Trigger: CGGTGGGATCATGGGGTCCTGTACATGAAGTATCCAGTATGGCCTCGCTACAGCACTTCTCTGCAGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | AGGTACCGTGCCAAAACGGAAGGGTGGGTATTGGTCTaGAGGCCGCTGAAACTTCTTGTCACTAAGGCCCGA | + |
Preference number: 6 (lower is better) Translates to: RYRAKTEGWVLV*RPLKLLVTKAR Trigger: TCGGGCCTTAGTGACAAGAAGTTTCAGCGGCCTCAAGACCAATACCCACCCTTCCGTTTTGGCACGGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CCA 72 bp | TGTGCTGCCATTAGGTACCGTGCCAAAACGGAAGGGTaGGTATTGGTCTTGAGGCCGCTGAAACTTCTTGTC | + |
Preference number: 6 (lower is better) Translates to: CAAIRYRAKTEG*VLVLRPLKLLV Trigger: GACAAGAAGTTTCAGCGGCCTCAAGACCAATACCCACCCTTCCGTTTTGGCACGGTACCTAATGGCAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |
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CDS CAA 72 bp | GCCATTAGGTACCGTGCCAAAACGGAAGGGTGGGTATaGGTCTTGAGGCCGCTGAAACTTCTTGTCACTAAG | + |
Preference number: 6 (lower is better) Translates to: AIRYRAKTEGWV*VLRPLKLLVTK Trigger: CTTAGTGACAAGAAGTTTCAGCGGCCTCAAGACCAATACCCACCCTTCCGTTTTGGCACGGTACCTAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003351.13 ENSMUST00000106554.2 |