RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001985

Ensembl transcript IDs: ENSMUST00000030676.8

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGGTCTCTGTGGAGCCAGGACAGGACCCTCATCAGCGGCAGCTaGAGATTTCGGTGCGCTTGGCCGTGGCTGCAGGAGCGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LWSLWSQDRTLISGS*RFRCAWPWLQERAW
Trigger: CCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGATGAGGGTCCTGTCCTGGCTCCACAGAGACCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp TGCACTGGGCTTGGCTGCGAGTCTCCCCTTTCCTCCCTCCCCCAGTaGAGCCAGCCAGCCAGAGCTCCCAAGAACCGGCATGGTGGGAGT +
Preference number: 1 (lower is better)
Translates to: CTGLGCESPLSSLPQ*SQPARAPKNRHGGS
Trigger: ACTCCCACCATGCCGGTTCTTGGGAGCTCTGGCTGGCTGGCTGCACTGGGGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp GTGCAGCCAGCCAGCCAGAGCTCCCAAGAACCGGCATGGTGGGAGTaGTCACATGTGCCCATCATGGGGGCCACCCCGTTGGCTGAAGGG +
Preference number: 1 (lower is better)
Translates to: VQPASQSSQEPAWWE*SHVPIMGATPLAEG
Trigger: CCCTTCAGCCAACGGGGTGGCCCCCATGATGGGCACATGTGATCACTCCCACCATGCCGGTTCTTGGGAGCTCTGGCTGGCTGGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp TGTGCTCTCCTCTCCCGGGCCAGCGTGGCTTCTCCTATCATCATGTaGACTGGGCTTGGCTGCGAGTCTCCCCTTTCCTCCCTCCCCCAG +
Preference number: 1 (lower is better)
Translates to: CALLSRASVASPIIM*TGLGCESPLSSLPQ
Trigger: CTGGGGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATGATGATAGGAGAAGCCACGCTGGCCCGGGAGAGGAGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp TCTCCTCTCCCGGGCCAGCGTGGCTTCTCCTATCATCATGTGCACTaGGCTTGGCTGCGAGTCTCCCCTTTCCTCCCTCCCCCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: SPLPGQRGFSYHHVH*AWLRVSPFLPPPVQ
Trigger: CTGCACTGGGGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATGATGATAGGAGAAGCCACGCTGGCCCGGGAGAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp CAAGGCCAGCACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTTaGCTTCCTCTGCGTGGACTGGGCCTGAAGTCCCCGCTGGACCCA +
Preference number: 1 (lower is better)
Translates to: QGQHEMRMSVLSGLL*LPLRGLGLKSPLDP
Trigger: TGGGTCCAGCGGGGACTTCAGGCCCAGTCCACGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGCTGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AAGTGGGGTTTCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTaGTCTCTGTGGAGCCAGGACAGGACCCTCATCAGCGGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: KWGFRAQWREGSWSL*SLWSQDRTLISGSW
Trigger: CCAGCTGCCGCTGATGAGGGTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp GTCAGCCCAGGCAGGGATAAAGTGGGGTTTCAGAGCACAGTGGCGTaGGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGACAGGAC +
Preference number: 1 (lower is better)
Translates to: VSPGRDKVGFQSTVA*GLLEPLVSVEPGQD
Trigger: GTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGCCTGGGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp TTCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTaGAGCCAGGACAGGACCCTCATCAGCGGCAGCTGGAGATTTCGG +
Preference number: 1 (lower is better)
Translates to: FRAQWREGSWSLWSL*SQDRTLISGSWRFR
Trigger: CCGAAATCTCCAGCTGCCGCTGATGAGGGTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp GCACACACCCACCCAATGGGCACAGCAGTCTGGTCTGCCCTCCCGTaGTGTCTTCAGGGCACACAAGCCTGCACACAAATGTGGATGCAC +
Preference number: 1 (lower is better)
Translates to: AHTHPMGTAVWSALP*CLQGTQACTQMWMH
Trigger: GTGCATCCACATTTGTGTGCAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTGGGTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp GACTCCTCCTGTATAGCACACACCCACCCAATGGGCACAGCAGTCTaGTCTGCCCTCCCGTGCTGTCTTCAGGGCACACAAGCCTGCACA +
Preference number: 1 (lower is better)
Translates to: DSSCIAHTHPMGTAV*SALPCCLQGTQACT
Trigger: TGTGCAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTGGGTGTGTGCTATACAGGAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp TCCCTCTTGACTCCCTTCCCTACCCTGGCAGAGACACAGCTTAGCTaGGCAGGGTGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTA +
Preference number: 1 (lower is better)
Translates to: SLLTPFPTLAETQLS*AGWSPGCLGLGWSL
Trigger: TAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCACCCTGCCCAGCTAAGCTGTGTCTCTGCCAGGGTAGGGAAGGGAGTCAAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGCTGGAGATTTCGGTGCGCTTGGCCGTGGCTGCAGGAGCGGGCCTaGCTTTTAAGTGTAGATGGCCCAAGGGCTGGGGTTGAAGCAAAG +
Preference number: 1 (lower is better)
Translates to: SWRFRCAWPWLQERA*LLSVDGPRAGVEAK
Trigger: CTTTGCTTCAACCCCAGCCCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp GCAGGGATAAAGTGGGGTTTCAGAGCACAGTGGCGTGAGGGCTCTTaGAGCCTCTGGTCTCTGTGGAGCCAGGACAGGACCCTCATCAGC +
Preference number: 1 (lower is better)
Translates to: AGIKWGFRAQWREGS*SLWSLWSQDRTLIS
Trigger: GCTGATGAGGGTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGGAAGTCAGCCCAGGCAGGGATAAAGTGGGGTTTCAGAGCACAGTaGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGAC +
Preference number: 1 (lower is better)
Translates to: RKSAQAGIKWGFRAQ*REGSWSLWSLWSQD
Trigger: GTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGCCTGGGCTGACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCATGGCCTCATaGGGCATGAAGCAGCAGCAGCTGCACCCCACCTTCAGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCSMAS*GMKQQQLHPTFSPP
Trigger: GGGAGGGCTGAAGGTGGGGTGCAGCTGCTGCTGCTTCATGCCGCATGAGGCCATGCTACACACACACACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp CTCCTGTATAGCACACACCCACCCAATGGGCACAGCAGTCTGGTCTaGCCTCCCGTGCTGTCTTCAGGGCACACAAGCCTGCACACAAAT +
Preference number: 1 (lower is better)
Translates to: LLYSTHPPNGHSSLV*PPVLSSGHTSLHTN
Trigger: ATTTGTGTGCAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTGGGTGTGTGCTATACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp GGCAGAGGCCTGCCAGAAATACCTGGCTATGGAGGAGAAGAGAGATaGTTGGTGATGGAGCCTGAGAGGCATGTGCTTCCGCTGGCCTTC +
Preference number: 1 (lower is better)
Translates to: GRGLPEIPGYGGEER*LVMEPERHVLPLAF
Trigger: GAAGGCCAGCGGAAGCACATGCCTCTCAGGCTCCATCACCAACCATCTCTCTTCTCCTCCATAGCCAGGTATTTCTGGCAGGCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CAGCTTAGCTGGGCAGGGTGGTCTCCAGGCTGTTTGGGACTGGGCTaGTCTCTAGAACAAACACAGGACTTCAGCCAGAGGGCAAGCGTT +
Preference number: 1 (lower is better)
Translates to: QLSWAGWSPGCLGLG*SLEQTQDFSQRASV
Trigger: AACGCTTGCCCTCTGGCTGAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCACCCTGCCCAGCTAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp GAGGGAGGGCACCTTCTCTGTTCTGTGCAGCCTTGGAGAACAATCTaGTGTGATGACGACCTCGTTCGCATTCCTGGGGACTCTCGAGAC +
Preference number: 1 (lower is better)
Translates to: EGGHLLCSVQPWRTI*CDDDLVRIPGDSRD
Trigger: GTCTCGAGAGTCCCCAGGAATGCGAACGAGGTCGTCATCACAGCAGATTGTTCTCCAAGGCTGCACAGAACAGAGAAGGTGCCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp ACTGGTGTCCCCCAGTTCTCAGTTCTCAACCCATATTGCTCACCCTaGTCCCTGATCAGAGACCAACATCCATCCAGCTGTGGAGGCCCC +
Preference number: 1 (lower is better)
Translates to: TGVPQFSVLNPYCSP*SLIRDQHPSSCGGP
Trigger: GGGGCCTCCACAGCTGGATGGATGTTGGTCTCTGATCAGGGACCAGGGTGAGCAATATGGGTTGAGAACTGAGAACTGGGGGACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTaGCCAGTGATCCCTCCCATAGCAGGCATGCTGACACATCCTGGT +
Preference number: 1 (lower is better)
Translates to: RCLPVHFPMEPSGKL*PVIPPIAGMLTHPG
Trigger: ACCAGGATGTGTCAGCATGCCTGCTATGGGAGGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp ACCGAGGGGCAGTCTCTTACCTCAAGGATTCTAAGTCCAACTCACTaGCCAACACAACTGCCCAGGAGCCACCTGAGCCCCCACAAAGTG +
Preference number: 1 (lower is better)
Translates to: TEGQSLTSRILSPTH*PTQLPRSHLSPHKV
Trigger: CACTTTGTGGGGGCTCAGGTGGCTCCTGGGCAGTTGTGTTGGCCAGTGAGTTGGACTTAGAATCCTTGAGGTAAGAGACTGCCCCTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp AGCGGCTGGAACTCACACACAGAAAGTCAAACACGCAGACATGTGTaGTCTCCTCTCCCGGGCCAGCGTGGCTTCTCCTATCATCATGTG +
Preference number: 1 (lower is better)
Translates to: SGWNSHTESQTRRHV*SPLPGQRGFSYHHV
Trigger: CACATGATGATAGGAGAAGCCACGCTGGCCCGGGAGAGGAGAGCACACATGTCTGCGTGTTTGACTTTCTGTGTGTGAGTTCCAGCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGAGATCAGGGGCCAGAATGGCCTTGTGTCTCTGTGTTGGGTCTTTaGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCTACCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: RDQGPEWPCVSVLGL*LIFQEAATPFLPWG
Trigger: CCCCCAGGGTAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCCCTGATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CCTTCCAGGTGGGCATCCACGCAGGGCAATTCCAGAGGTGGACCATaGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGG +
Preference number: 1 (lower is better)
Translates to: PSRWASTQGNSRGGP*SLSCSDAGAYSREW
Trigger: CCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGCCCTGCGTGGATGCCCACCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATaGCTGTCCCTTTCCTGTCACCTCCGCACTAGTCTGCCTTCTTTG +
Preference number: 1 (lower is better)
Translates to: RCPASYKLPGGDAHP*LSLSCHLRTSLPSL
Trigger: CAAAGAAGGCAGACTAGTGCGGAGGTGACAGGAAAGGGACAGCCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp ACGGTTCTTGGTGAACGTGAGCCTGGTCTGACTTCCGCTCCCTCGTaGAGATATTTAATCTGCACACCCCTCCCCGCATTGCATGCTACA +
Preference number: 1 (lower is better)
Translates to: TVLGEREPGLTSAPS*RYLICTPLPALHAT
Trigger: TGTAGCATGCAATGCGGGGAGGGGTGTGCAGATTAAATATCTCCACGAGGGAGCGGAAGTCAGACCAGGCTCACGTTCACCAAGAACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp GCTATACTTCAGGCTGTGTCCTGGTCCCTACCCTCTGCCATTCAGTaGACACACACACACACACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: AILQAVSWSLPSAIQ*THTHTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTGAATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAGTATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp CAGACAGAGCCAGCCAGCCATGGTCCTGCTCAGGTATGTCCCATCTaGTCCATCCAAACCAATCTTTGTGTTTCCCATTGCTCCTCAGAG +
Preference number: 1 (lower is better)
Translates to: QTEPASHGPAQVCPI*SIQTNLCVSHCSSE
Trigger: CTCTGAGGAGCAATGGGAAACACAAAGATTGGTTTGGATGGAGCAGATGGGACATACCTGAGCAGGACCATGGCTGGCTGGCTCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp TCAACTCTAGGAGACAGAGACAAAAGGGCAAGGCCCCTTCCACCGTaGCAAGTGGTTAGGCCTATTCCAGATGTGCACCTTGCTCCAACA +
Preference number: 1 (lower is better)
Translates to: STLGDRDKRARPLPP*QVVRPIPDVHLAPT
Trigger: TGTTGGAGCAAGGTGCACATCTGGAATAGGCCTAACCACTTGCCACGGTGGAAGGGGCCTTGCCCTTTTGTCTCTGTCTCCTAGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGTAAGGGGCTGTGCAAGGCCAGGCGCTGCCATCTTGAATCTCTCTaGTTCCTTGATAGCTCCCTGCCACTTTGTACCTGTCTCAGAATG +
Preference number: 1 (lower is better)
Translates to: SKGLCKARRCHLESL*FLDSSLPLCTCLRM
Trigger: CATTCTGAGACAGGTACAAAGTGGCAGGGAGCTATCAAGGAACCAGAGAGATTCAAGATGGCAGCGCCTGGCCTTGCACAGCCCCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp GGACTCTCGAGACGTTTGTGGCTCAGGACACTGACCCGAAGCATCTaGGATCACAGTCTCCATCTGTGTTTCCTTCTCCCGTACCAAACA +
Preference number: 1 (lower is better)
Translates to: GLSRRLWLRTLTRSI*DHSLHLCFLLPYQT
Trigger: TGTTTGGTACGGGAGAAGGAAACACAGATGGAGACTGTGATCTCAGATGCTTCGGGTCAGTGTCCTGAGCCACAAACGTCTCGAGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp AGACATAGTTGTGTGAGGCATTCTTCTATTCGGGGCTGGCCTATATaGTCAGACAGAGCCAGCCAGCCATGGTCCTGCTCAGGTATGTCC +
Preference number: 1 (lower is better)
Translates to: RHSCVRHSSIRGWPI*SDRASQPWSCSGMS
Trigger: GGACATACCTGAGCAGGACCATGGCTGGCTGGCTCTGTCTGATCATATAGGCCAGCCCCGAATAGAAGAATGCCTCACACAACTATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp TGCATATGTGAGGCCTTTGCCACCCAGGATCCTCTGACATCTGGGTaGTTTCAGATGCAGCTTGACAACTTTCCAGGCTACTCTGCAGGC +
Preference number: 1 (lower is better)
Translates to: CICEAFATQDPLTSG*FQMQLDNFPGYSAG
Trigger: GCCTGCAGAGTAGCCTGGAAAGTTGTCAAGCTGCATCTGAAATCACCCAGATGTCAGAGGATCCTGGGTGGCAAAGGCCTCACATATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp TGTGGGCACCTTGCATATGTGAGGCCTTTGCCACCCAGGATCCTCTaGCATCTGGGTGATTTCAGATGCAGCTTGACAACTTTCCAGGCT +
Preference number: 1 (lower is better)
Translates to: CGHLAYVRPLPPRIL*HLGDFRCSLTTFQA
Trigger: AGCCTGGAAAGTTGTCAAGCTGCATCTGAAATCACCCAGATGTCAGAGGATCCTGGGTGGCAAAGGCCTCACATATGCAAGGTGCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp CAAGGCCCCTTCCACCGTGGCAAGTGGTTAGGCCTATTCCAGATGTaGACCTTGCTCCAACAACCTGGGACATCCAGATATATCTTACTC +
Preference number: 1 (lower is better)
Translates to: QGPFHRGKWLGLFQM*TLLQQPGTSRYILL
Trigger: GAGTAAGATATATCTGGATGTCCCAGGTTGTTGGAGCAAGGTGCACATCTGGAATAGGCCTAACCACTTGCCACGGTGGAAGGGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp GGTCTTTGGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCTACCCTaGGGGCCTCTGGAGGTCTTATATCCTGTCCCTGAAAGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: GLWLIFQEAATPFLP*GPLEVLYPVPESFL
Trigger: AAGAAAGCTTTCAGGGACAGGATATAAGACCTCCAGAGGCCCCCAGGGTAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CGCACAGGATTGGACCCAATTCTCAGATCTGTCCACTGGACTGGGTaGGTCCCAGATGTTAACTCCATACGGTTGTTTGTCCATGGCATG +
Preference number: 1 (lower is better)
Translates to: RTGLDPILRSVHWTG*VPDVNSIRLFVHGM
Trigger: CATGCCATGGACAAACAACCGTATGGAGTTAACATCTGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CTGGGACATCCAGATATATCTTACTCAGAGATCTGCGCACAGGATTaGACCCAATTCTCAGATCTGTCCACTGGACTGGGTGGGTCCCAG +
Preference number: 1 (lower is better)
Translates to: LGHPDISYSEICAQD*TQFSDLSTGLGGSQ
Trigger: CTGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGGATGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp CAAGTATTTGGCTATACTTCAGGCTGTGTCCTGGTCCCTACCCTCTaGCATTCAGTGCACACACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: QVFGYTSGCVLVPTL*HSVHTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTGAATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAGTATAGCCAAATACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp TATCCTGTCCCTGAAAGCTTTCTTTCTTTAGGGGGCTCATTAGGTTaGGCGTACCCAGAAAGTTCTTCAGGTCCCCTCTGGCTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: YPVPESFLSLGGSLG*AYPESSSGPLWLLP
Trigger: TGGGAGAAGCCAGAGGGGACCTGAAGAACTTTCTGGGTACGCCCAACCTAATGAGCCCCCTAAAGAAAGAAAGCTTTCAGGGACAGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTaGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: SLSCSDAGAYSREWL*GVCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACACACGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp AGAGATCTGCGCACAGGATTGGACCCAATTCTCAGATCTGTCCACTaGACTGGGTGGGTCCCAGATGTTAACTCCATACGGTTGTTTGTC +
Preference number: 1 (lower is better)
Translates to: RDLRTGLDPILRSVH*TGWVPDVNSIRLFV
Trigger: GACAAACAACCGTATGGAGTTAACATCTGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 90 bp TGCTCCAACAACCTGGGACATCCAGATATATCTTACTCAGAGATCTaGGCACAGGATTGGACCCAATTCTCAGATCTGTCCACTGGACTG +
Preference number: 1 (lower is better)
Translates to: CSNNLGHPDISYSEI*AQDWTQFSDLSTGL
Trigger: CAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGGATGTCCCAGGTTGTTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CACACAAGGATCTCTGATGACATGGCTTCTCCTTTTACAAGTATTTaGCTATACTTCAGGCTGTGTCCTGGTCCCTACCCTCTGCCATTC +
Preference number: 1 (lower is better)
Translates to: HTRISDDMASPFTSI*LYFRLCPGPYPLPF
Trigger: GAATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAGTATAGCCAAATACTTGTAAAAGGAGAAGCCATGTCATCAGAGATCCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 90 bp CCCTGCCGTACTAACTGCTCTGCTGCCTCAACGCAGGATTTGAATTaGAACTTAGGTACATGTCTGCACATACATGGGTATGAGTACACA +
Preference number: 1 (lower is better)
Translates to: PCRTNCSAASTQDLN*NLGTCLHIHGYEYT
Trigger: TGTGTACTCATACCCATGTATGTGCAGACATGTACCTAAGTTCCAATTCAAATCCTGCGTTGAGGCAGCAGAGCAGTTAGTACGGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 90 bp TGTCATGCTCTCTGTAAGGACACTTTTTGCCTAACCCCTCACATCTaGTCCTTTCCAATGACCATGACGGTTTCAAACCTCCAGAGATGG +
Preference number: 1 (lower is better)
Translates to: CHALCKDTFCLTPHI*SFPMTMTVSNLQRW
Trigger: CCATCTCTGGAGGTTTGAAACCGTCATGGTCATTGGAAAGGATCAGATGTGAGGGGTTAGGCAAAAAGTGTCCTTACAGAGAGCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGGATCTGCCTCCCTCTTaGCTCCCTTCCCTACCCTGG +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARDLPPS*LPSLPW
Trigger: CCAGGGTAGGGAAGGGAGTCAAGAGGGAGGCAGATC...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGAGAGCCAGCCAGCCATaGTCCTGCTCAGGTATGTCC +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARRASQP*SCSGMS
Trigger: GGACATACCTGAGCAGGACCATGGCTGGCTGGCTCT...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGCTTCAGGCTGTGTCCTaGTCCCTACCCTCTGCCATT +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARLQAVS*SLPSAI
Trigger: AATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAG...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGGATATAAGGCTCAGGTaGGAGGGGAGATCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARDIRLR*EGRSCS
Trigger: GCTGCAGGATCTCCCCTCCCACCTGAGCCTTATATC...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGCTCCCTTCCCTACCCTaGCAGAGACACAGCTTAGCT +
Preference number: 2 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRLPSLP*QRHSLA
Trigger: AGCTAAGCTGTGTCTCTGCCAGGGTAGGGAAGGGAG...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGCCACCCAGGATCCTCTaGCATCTGGGTGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARPPRIL*HLGDFR
Trigger: TCTGAAATCACCCAGATGTCAGAGGATCCTGGGTGG...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGTGCACTGGGCTTGGCTaGGAGTCTCCCCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: CARCPASYKLPGGDAHPWCTGLG*ESPLSS
Trigger: GGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCA...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGCCCTCTGCCATTCAGTaGACACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRPSAIQ*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCACTGAATGGCAGAGGG...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp CTGGCAGAGACACAGCTTAGCTGGGCAGGGTGGTCTCCAGGCTGTTaGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LAETQLSWAGWSPGC*GLGWSLEQTQDFSQ
Trigger: CTGGCTGAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCACCCTGCCCAGCTAAGCTGTGTCTCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGCTTCTCTTCTCAGGATaGCAGAGGGAGGCCAAATTC +
Preference number: 2 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRLLFSG*QREAKF
Trigger: GAATTTGGCCTCCCTCTGTCATCCTGAGAAGAGAAG...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGCATGTGCACTGGGCTTaGCTGCGAGTCTCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: CARCPASYKLPGGDAHPWHVHWA*LRVSPF
Trigger: GAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATG...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGCTAACCCCTCACATCTaGTCCTTTCCAATGACCATG +
Preference number: 2 (lower is better)
Translates to: SEHSGVRALGASGLCGARLTPHI*SFPMTM
Trigger: CATGGTCATTGGAAAGGATCAGATGTGAGGGGTTAG...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp ATCCAAACACCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTGGCTGCGTCTTTCGGGTCTCCTTTaGCTTCCTCTGCGTGGACTG +
Preference number: 2 (lower is better)
Translates to: IQTPIRCPESESLLSWLRLSGLL*LPLRGL
Trigger: CAGTCCACGCAGAGGAAGGCAAAGGAGACCCGAAAG...ACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGGTGTTTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCGGGAGTGATCACATGTaGCCATCATGGGGGCCACCC +
Preference number: 2 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFGSDHM*PSWGPP
Trigger: GGGTGGCCCCCATGATGGGCACATGTGATCACTCCC...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGAGCCAGCCATGGTCCTaGTCAGGTATGTCCCATCTG +
Preference number: 2 (lower is better)
Translates to: CARCPASYKLPGGDAHPWSQPWS*SGMSHL
Trigger: CAGATGGGACATACCTGAGCAGGACCATGGCTGGCT...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp CCATGGCTGTCCCTTTCCTGTCACCTCCGCACTAGTCTGCCTTCTTaGACGTGGTCCACAGTACTGATGCTGGCAAGGTCTGGCTTGATC +
Preference number: 2 (lower is better)
Translates to: PWLSLSCHLRTSLPS*TWSTVLMLARSGLI
Trigger: GATCAAGCCAGACCTTGCCAGCATCAGTACTGTGGACCACGTCAAAGAAGGCAGACTAGTGCGGAGGTGACAGGAAAGGGACAGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp GAGGTCTGTGACCTACCTGACAGAGGCTTTCTACCAGCTGCCCTGTaGGGAGAAGAACAACAACGAGGACTGGCAGACAGTAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EVCDLPDRGFLPAAL*GEEQQRGLADSKGL
Trigger: CAGCCCCTTACTGTCTGCCAGTCCTCGTTGTTGTTCTTCTCCCAACAGGGCAGCTGGTAGAAAGCCTCTGTCAGGTAGGTCACAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCAAGAGAGATGGTTGGTaGTGGAGCCTGAGAGGCATG +
Preference number: 2 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGKRDGW*WSLRGM
Trigger: CATGCCTCTCAGGCTCCATCACCAACCATCTCTCTT...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGGTGAGGGATTGTGGGTaGCTGGTGTCCCCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAVRDCG*LVSPSS
Trigger: AGAACTGGGGGACACCAGTCACCCACAATCCCTCAC...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAGGCCACCCCGTTGGCTaGAGGGGTTCCTTCACCTCT +
Preference number: 2 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTGHPVG*RGSFTS
Trigger: AGAGGTGAAGGAACCCCTTCAGCCAACGGGGTGGCC...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCTCTTCAGGTCCCCTCTaGCTTCTCCCACCTACCCCA +
Preference number: 2 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTSSGPL*LLPPTP
Trigger: TGGGGTAGGTGGGAGAAGCCAGAGGGGACCTGAAGA...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCGATCAGGGGCCAGAATaGCCTTGTGTCTCTGTGTTG +
Preference number: 2 (lower is better)
Translates to: SPCAFSHGALRKAVASDPDQGPE*PCVSVL
Trigger: CAACACAGAGACACAAGGCCATTCTGGCCCCTGATC...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp AAGAGATCAGGGGCCAGAATGGCCTTGTGTCTCTGTGTTGGGTCTTaGGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCTACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: KRSGARMALCLCVGS*VNLPGGSYSLPTLG
Trigger: CCCCAGGGTAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCCCTGATCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp AGGTGGGCATCCACGCAGGGCAATTCCAGAGGTGGACCATGGAGTTaGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: RWASTQGNSRGGPWS*SCSDAGAYSREWLW
Trigger: CCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGCCCTGCGTGGATGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGGCAGCACCAGAAAAGTaGGGGATTGTGGGTGACTGG +
Preference number: 2 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAAAPEK*GIVGDW
Trigger: CCAGTCACCCACAATCCCTCACTTTTCTGGTGCTGC...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACACATCACCCCAGAAGGTaGGCCCCAGAAGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTHHPRR*APEGVS
Trigger: GGAGACACCTTCTGGGGCTCACCTTCTGGGGTGATG...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACATTGCCTTCCTCTGCGTaGACTGGGCCTGAAGTCCCC +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTLPSSA*TGPEVP
Trigger: GGGGACTTCAGGCCCAGTCCACGCAGAGGAAGGCAA...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp TTTCAAACCTCCAGAGATGGAACCACAGGCCATCTGCTCATCCCTTaGGCTGTCACCTTCTCTGGCTTCTCCTCTGGGGTCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: FQTSRDGTTGHLLIP*AVTFSGFSSGVSLQ
Trigger: TTGAAGGGAGACCCCAGAGGAGAAGCCAGAGAAGGTGACAGCCAAAGGGATGAGCAGATGGCCTGTGGTTCCATCTCTGGAGGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCACAACAGGACACTCTATaGACAGCAAAGGAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPQQDTL*TAKEKA
Trigger: TGCCTTCTCCTTTGCTGTTCATAGAGTGTCCTGTTG...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGGCACACAAATGTGGATaGACACGAGTGTGGATGTAC +
Preference number: 2 (lower is better)
Translates to: CARCPASYKLPGGDAHPWAHKCG*TRVWMY
Trigger: GTACATCCACACTCGTGTGCATCCACATTTGTGTGC...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACACTGTGGAGGCCCCTATaGCCCTGTCATGCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTLWRPL*PCHALC
Trigger: ACAGAGAGCATGACAGGGCCATAGGGGCCTCCACAG...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGGGATCTCTGATGACATaGCTTCTCCTTTTACAAGTA +
Preference number: 2 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRGSLMT*LLLLQV
Trigger: TACTTGTAAAAGGAGAAGCCATGTCATCAGAGATCC...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACACTTAGCTGGGCAGGGTaGTCTCCAGGCTGTTTGGGA +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTLSWAG*SPGCLG
Trigger: TCCCAAACAGCCTGGAGACCACCCTGCCCAGCTAAG...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp CCTGGGACATCCAGATATATCTTACTCAGAGATCTGCGCACAGGATaGGACCCAATTCTCAGATCTGTCCACTGGACTGGGTGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: PGTSRYILLRDLRTG*DPILRSVHWTGWVP
Trigger: TGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGGATGTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCACCTTCTCTGTTCTGTaGAGCCTTGGAGAACAATCT +
Preference number: 2 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGTFSVL*SLGEQS
Trigger: AGATTGTTCTCCAAGGCTGCACAGAACAGAGAAGGT...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp CTCCAGAAAAGAGATCAGGGGCCAGAATGGCCTTGTGTCTCTGTGTaGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCTA +
Preference number: 2 (lower is better)
Translates to: LQKRDQGPEWPCVSV*GLWLIFQEAATPFL
Trigger: TAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCCCTGATCTCTTTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGAAGGTGTCTCCCTGTaGATTTTCCCATGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTEGVSL*IFPWSP
Trigger: AGGGCTCCATGGGAAAATGCACAGGGAGACACCTTC...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGGAGGAGAAGAGAGATaGTTGGTGATGGAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTGGEER*LVMEPE
Trigger: CTCAGGCTCCATCACCAACCATCTCTCTTCTCCTCC...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCCTCTGGCTTCTCCTCTaGGGTCTCCCTTCAATCCCC +
Preference number: 2 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLLWLLL*GLPSIP
Trigger: GGGGATTGAAGGGAGACCCCAGAGGAGAAGCCAGAG...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 90 bp TGGTCCTGCTCAGGTATGTCCCATCTGCTCCATCCAAACCAATCTTaGTGTTTCCCATTGCTCCTCAGAGCATTTGTGTGTTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WSCSGMSHLLHPNQS*CFPLLLRAFVCSSL
Trigger: GAGGCTGGAACACACAAATGCTCTGAGGAGCAATGGGAAACACAAAGATTGGTTTGGATGGAGCAGATGGGACATACCTGAGCAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGACAAAAGCACATGTGTaGTATGAACATGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGATKAHV*YEHGGG
Trigger: CCCACCTCCATGTTCATATCACACATGTGCTTTTGT...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCGGGATTGTGGGTGACTaGTGTCCCCCAGTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLGIVGD*CPPVLS
Trigger: ACTGAGAACTGGGGGACACCAGTCACCCACAATCCC...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCGGCTGCTGCTGTTGGTaGAGCCATATTGAGATGAGC +
Preference number: 2 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLGCCCW*SHIEMS
Trigger: GCTCATCTCAATATGGCTTCACCAACAGCAGCAGCC...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR GCA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGCACAGCTTTTCATGTTaGCAAGGGGCTGCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVHSFSC*QGAAAV
Trigger: AACAGCAGCAGCCCCTTGGCAACATGAAAAGCTGTG...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCAGAAATACCTGGCTATaGAGGAGAAGAGAGATGGTT +
Preference number: 2 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTRNTWL*RRREMV
Trigger: AACCATCTCTCTTCTCCTCCATAGCCAGGTATTTCT...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCCCTTTTACAAGTATTTaGCTATACTTCAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SPCAFSHGALRKAVASDPPFTSI*LYFRLC
Trigger: ACACAGCCTGAAGTATAGCCAAATACTTGTAAAAGG...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCCTTATATCCTGTCCCTaGAAGCTTTCTTTCTTTAGG +
Preference number: 2 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFLISCP*KLSFFR
Trigger: CCTAAAGAAAGAAAGCTTTCAGGGACAGGATATAAG...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACATGTTCTGTGCAGCCTTaGAGAACAATCTGCTGTGAT +
Preference number: 2 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTCSVQP*RTICCD
Trigger: ATCACAGCAGATTGTTCTCCAAGGCTGCACAGAACA...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGTTCATCACCAGCGGCTaGAACTCACACACAGAAAGT +
Preference number: 2 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVFITSG*NSHTES
Trigger: ACTTTCTGTGTGTGAGTTCCAGCCGCTGGTGATGAA...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR TCA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGTTCCTTCACCTCTGCTaGGAAGACTTAAGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVFLHLC*EDLSSR
Trigger: TCTAGAGCTTAAGTCTTCTCAGCAGAGGTGAAGGAA...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCTCTGTGTTGGGTCTTTaGTTAATCTTCCAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLSVLGL*LIFQEA
Trigger: TGCCTCCTGGAAGATTAACCAAAGACCCAACACAGA...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGGTTATAAAATGGTATTaGACAACAGAAGACAGTGGT +
Preference number: 2 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAVIKWY*TTEDSG
Trigger: ACCACTGTCTTCTGTTGTCCAATACCATTTTATAAC...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GACAGGACCCTCATCAGCGGCAGCTGGAGATTTCGGTaGGCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: DRTLISGSWRFR*AWPWLQERAWL
Trigger: AAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGATGAGGGTCCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CTGTGGAGCCAGGACAGGACCCTCATCAGCGGCAGCTaGAGATTTCGGTGCGCTTGGCCGTGGCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LWSQDRTLISGS*RFRCAWPWLQE
Trigger: CTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGATGAGGGTCCTGTCCTGGCTCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTaGAGCCAGGACAGGACCCTCATCAGCGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QWREGSWSLWSL*SQDRTLISGSW
Trigger: CCAGCTGCCGCTGATGAGGGTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GCTCCCAAGAACCGGCATGGTGGGAGTGATCACATGTaGCCATCATGGGGGCCACCCCGTTGGCTGAAGGGG +
Preference number: 3 (lower is better)
Translates to: APKNRHGGSDHM*PSWGPPRWLKG
Trigger: CCCCTTCAGCCAACGGGGTGGCCCCCATGATGGGCACATGTGATCACTCCCACCATGCCGGTTCTTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CCGGGCCAGCGTGGCTTCTCCTATCATCATGTGCACTaGGCTTGGCTGCGAGTCTCCCCTTTCCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: PGQRGFSYHHVH*AWLRVSPFLPP
Trigger: GGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATGATGATAGGAGAAGCCACGCTGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGACACCCCTCCCCGCATaGCATGCTACAAAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SEHSGVRALGASGLCGARTPLPA*HATKAG
Trigger: CCCTGCCTTTGTAGCATGCAATGCGGGGAGGGGTGT...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp GCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATaGGGATGTCCGTCCTTTCGGGTCTCCTTTGCCTTC +
Preference number: 3 (lower is better)
Translates to: AASSSIPKASTR*GCPSFRVSFAF
Trigger: GAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp AGCACACACCCACCCAATGGGCACAGCAGTCTGGTCTaGCCTCCCGTGCTGTCTTCAGGGCACACAAGCCTG +
Preference number: 3 (lower is better)
Translates to: STHPPNGHSSLV*PPVLSSGHTSL
Trigger: CAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTGGGTGTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp ACCCTCATCAGCGGCAGCTGGAGATTTCGGTGCGCTTaGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: TLISGSWRFRCA*PWLQERAWLLS
Trigger: ACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGATGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GGCCCAGCCAGGAAGTCAGCCCAGGCAGGGATAAAGTaGGGTTTCAGAGCACAGTGGCGTGAGGGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: GPARKSAQAGIK*GFRAQWREGSW
Trigger: CCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGCCTGGGCTGACTTCCTGGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGTGGTCTCCAGGCTGTTaGGGACTGGGCTGGTCTCTA +
Preference number: 3 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRWSPGC*GLGWSL
Trigger: TAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTTaGCTTCCTCTGCGTGGACTGGGCCTGAAGTCCCCG +
Preference number: 3 (lower is better)
Translates to: HEMRMSVLSGLL*LPLRGLGLKSP
Trigger: CGGGGACTTCAGGCCCAGTCCACGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTaGCTGCGTGCTAGAAGGCCTGGCTTGAGGGGAATG +
Preference number: 3 (lower is better)
Translates to: PIRCPESESLLS*LRARRPGLRGM
Trigger: CATTCCCCTCAAGCCAGGCCTTCTAGCACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAGCGTGGCTTCTCCTATCATCATGTGCACTGGGCTTaGCTGCGAGTCTCCCCTTTCCTCCCTCCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: QRGFSYHHVHWA*LRVSPFLPPPV
Trigger: CACTGGGGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATGATGATAGGAGAAGCCACGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp AAGTGGGGTTTCAGAGCACAGTGGCGTGAGGGCTCTTaGAGCCTCTGGTCTCTGTGGAGCCAGGACAGGACC +
Preference number: 3 (lower is better)
Translates to: KWGFRAQWREGS*SLWSLWSQDRT
Trigger: GGTCCTGTCCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GCCCAGGCAGGGATAAAGTGGGGTTTCAGAGCACAGTaGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: AQAGIKWGFRAQ*REGSWSLWSLW
Trigger: CCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp TGTGTGTGTGTGTGTGTAGCATGGCCTCATGCGGCATaGAGCAGCAGCAGCTGCACCCCACCTTCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: CVCVCVAWPHAA*SSSSCTPPSAL
Trigger: GAGGGCTGAAGGTGGGGTGCAGCTGCTGCTGCTTCATGCCGCATGAGGCCATGCTACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp GGCAGGGATAAAGTGGGGTTTCAGAGCACAGTGGCGTaGGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: GRDKVGFQSTVA*GLLEPLVSVEP
Trigger: TGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGAAACCCCACTTTATCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CACCCAATGGGCACAGCAGTCTGGTCTGCCCTCCCGTaGTGTCTTCAGGGCACACAAGCCTGCACACAAATG +
Preference number: 3 (lower is better)
Translates to: HPMGTAVWSALP*CLQGTQACTQM
Trigger: CATTTGTGTGCAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAGCTGCCCTGTTGGGAGAAGAACAACAACGAGGACTaGCAGACAGTAAGGGGCTGTGCAAGGCCAGGCGCT +
Preference number: 3 (lower is better)
Translates to: QLPCWEKNNNED*QTVRGCARPGA
Trigger: AGCGCCTGGCCTTGCACAGCCCCTTACTGTCTGCCAGTCCTCGTTGTTGTTCTTCTCCCAACAGGGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp ATCAGCGGCAGCTGGAGATTTCGGTGCGCTTGGCCGTaGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGAT +
Preference number: 3 (lower is better)
Translates to: ISGSWRFRCAWP*LQERAWLLSVD
Trigger: ATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGAGCAAAGTTGGTCTATaGGTTGAAGGGCCTGTGGGA +
Preference number: 3 (lower is better)
Translates to: SEHSGVRALGASGLCGARSKVGL*VEGPVG
Trigger: TCCCACAGGCCCTTCAACCAATAGACCAACTTTGCT...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGAGTTCTCAACCCATATaGCTCACCCTGGTCCCTGAT +
Preference number: 3 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRSSQPI*LTLVPD
Trigger: ATCAGGGACCAGGGTGAGCAATATGGGTTGAGAACT...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp ACAGCTTCAGAAAGCCATAGACAAGACAAGAGGAGATaGAGCCCGAGCAGCCGGCCGAGGGTCCGTGTGGGT +
Preference number: 3 (lower is better)
Translates to: TASESHRQDKRR*SPSSRPRVRVG
Trigger: ACCCACACGGACCCTCGGCCGGCTGCTCGGGCTTCATCTCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTAGCATGGCCTCATaGGGCATGAAGCAGCAGCAGCTGCACCCCACCTTC +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCSMAS*GMKQQQLHPTF
Trigger: GAAGGTGGGGTGCAGCTGCTGCTGCTTCATGCCGCATGAGGCCATGCTACACACACACACACACACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp ATGGCCCAAGGGCTGGGGTTGAAGCAAAGGGCAGGCTaGAGACCACACAAAAGCAAAGCCCAGGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: MAQGLGLKQRAG*RPHKSKAQVSS
Trigger: AGAGGAGACCTGGGCTTTGCTTTTGTGTGGTCTGCAGCCTGCCCTTTGCTTCAACCCCAGCCCTTGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TGTATAGCACACACCCACCCAATGGGCACAGCAGTCTaGTCTGCCCTCCCGTGCTGTCTTCAGGGCACACAA +
Preference number: 3 (lower is better)
Translates to: CIAHTHPMGTAV*SALPCCLQGTQ
Trigger: TTGTGTGCCCTGAAGACAGCACGGGAGGGCAGACCAGACTGCTGTGCCCATTGGGTGGGTGTGTGCTATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAAGCGTTAGCCATACCTCTGGATATAAGGCTCAGGTaGGAGGGGAGATCCTGCAGCACGCCACCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: QALAIPLDIRLR*EGRSCSTPPLF
Trigger: GAAGAGGGGTGGCGTGCTGCAGGATCTCCCCTCCCACCTGAGCCTTATATCCAGAGGTATGGCTAACGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TGGGCAGGGTGGTCTCCAGGCTGTTTGGGACTGGGCTaGTCTCTAGAACAAACACAGGACTTCAGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: WAGWSPGCLGLG*SLEQTQDFSQR
Trigger: CCTCTGGCTGAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCACCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp AGTCTTTGTCCAATAGCCCCCAGGGCCCGGACAGAATaGGTGCTGCCCCACCACAGGGCTGGTATAAATAGG +
Preference number: 3 (lower is better)
Translates to: SLCPIAPRARTE*VLPHHRAGINR
Trigger: CCTATTTATACCAGCCCTGTGGTGGGGCAGCACCCATTCTGTCCGGGCCCTGGGGGCTATTGGACAAAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGGTCCCGACTGCTGGCTaGTTTGCCAGCAAAGTTGGT +
Preference number: 3 (lower is better)
Translates to: CARCPASYKLPGGDAHPWVPTAG*FASKVG
Trigger: ACCAACTTTGCTGGCAAACAAGCCAGCAGTCGGGAC...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp AAAGAGACACGCTCTAGCCCTGAGCTGTGGGCACCTTaGATATGTGAGGCCTTTGCCACCCAGGATCCTCTG +
Preference number: 3 (lower is better)
Translates to: KETRSSPELWAP*ICEAFATQDPL
Trigger: CAGAGGATCCTGGGTGGCAAAGGCCTCACATATGCAAGGTGCCCACAGCTCAGGGCTAGAGCGTGTCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CTGGCAGACAGTAAGGGGCTGTGCAAGGCCAGGCGCTaGCATCTTGAATCTCTCTGGTTCCTTGATAGCTCC +
Preference number: 3 (lower is better)
Translates to: LADSKGLCKARR*HLESLWFLDSS
Trigger: GGAGCTATCAAGGAACCAGAGAGATTCAAGATGGCAGCGCCTGGCCTTGCACAGCCCCTTACTGTCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GAACAACAACGAGGACTGGCAGACAGTAAGGGGCTGTaGAAGGCCAGGCGCTGCCATCTTGAATCTCTCTGG +
Preference number: 3 (lower is better)
Translates to: EQQRGLADSKGL*KARRCHLESLW
Trigger: CCAGAGAGATTCAAGATGGCAGCGCCTGGCCTTGCACAGCCCCTTACTGTCTGCCAGTCCTCGTTGTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GTTCTGCGGCCTCGGCAGAGGCCTGCCAGAAATACCTaGCTATGGAGGAGAAGAGAGATGGTTGGTGATGGA +
Preference number: 3 (lower is better)
Translates to: VLRPRQRPARNT*LWRRREMVGDG
Trigger: TCCATCACCAACCATCTCTCTTCTCCTCCATAGCCAGGTATTTCTGGCAGGCCTCTGCCGAGGCCGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTaGCCAGTGATCCCTCCCATAGCAGGCATGCTGACA +
Preference number: 3 (lower is better)
Translates to: PVHFPMEPSGKL*PVIPPIAGMLT
Trigger: TGTCAGCATGCCTGCTATGGGAGGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CTCGGACCCAGGAAAGGGATGAAGGCCTCAAATTACTaGCAAGAGACAGATCCAGGTGCGGCAGGGACAGAG +
Preference number: 3 (lower is better)
Translates to: LGPRKGMKASNY*QETDPGAAGTE
Trigger: CTCTGTCCCTGCCGCACCTGGATCTGTCTCTTGCCAGTAATTTGAGGCCTTCATCCCTTTCCTGGGTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CTATGGAGGAGAAGAGAGATGGTTGGTGATGGAGCCTaGGAGGCATGTGCTTCCGCTGGCCTTCACAGCTTC +
Preference number: 3 (lower is better)
Translates to: LWRRREMVGDGA*EACASAGLHSF
Trigger: GAAGCTGTGAAGGCCAGCGGAAGCACATGCCTCTCAGGCTCCATCACCAACCATCTCTCTTCTCCTCCATAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CAGGCTGTGTCCTGGTCCCTACCCTCTGCCATTCAGTaGACACACACACACACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: QAVSWSLPSAIQ*THTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACTGAATGGCAGAGGGTAGGGACCAGGACACAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp TCTGCCCTCCCGTGCTGTCTTCAGGGCACACAAGCCTaGACACAAATGTGGATGCACACGAGTGTGGATGTA +
Preference number: 3 (lower is better)
Translates to: SALPCCLQGTQA*TQMWMHTSVDV
Trigger: TACATCCACACTCGTGTGCATCCACATTTGTGTGCAGGCTTGTGTGCCCTGAAGACAGCACGGGAGGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TGTGAGGGAGGGCACCTTCTCTGTTCTGTGCAGCCTTaGAGAACAATCTGCTGTGATGACGACCTCGTTCGC +
Preference number: 3 (lower is better)
Translates to: CEGGHLLCSVQP*RTICCDDDLVR
Trigger: GCGAACGAGGTCGTCATCACAGCAGATTGTTCTCCAAGGCTGCACAGAACAGAGAAGGTGCCCTCCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GGTTGGGCGTACCCAGAAAGTTCTTCAGGTCCCCTCTaGCTTCTCCCACCTACCCCAAAGTTAGTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: GWAYPESSSGPL*LLPPTPKLVCG
Trigger: TCCACAGACTAACTTTGGGGTAGGTGGGAGAAGCCAGAGGGGACCTGAAGAACTTTCTGGGTACGCCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAGTCTCTTACCTCAAGGATTCTAAGTCCAACTCACTaGCCAACACAACTGCCCAGGAGCCACCTGAGCCCC +
Preference number: 3 (lower is better)
Translates to: QSLTSRILSPTH*PTQLPRSHLSP
Trigger: GGGGCTCAGGTGGCTCCTGGGCAGTTGTGTTGGCCAGTGAGTTGGACTTAGAATCCTTGAGGTAAGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTCCAGGTGGGCATCCACGCAGGGCAATTCCAGAGGTaGACCATGGAGTTTGTCATGTTCAGATGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: FQVGIHAGQFQR*TMEFVMFRCWC
Trigger: GCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGCCCTGCGTGGATGCCCACCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GAGACAAAAGGGCAAGGCCCCTTCCACCGTGGCAAGTaGTTAGGCCTATTCCAGATGTGCACCTTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: ETKGQGPFHRGK*LGLFQMCTLLQ
Trigger: TTGGAGCAAGGTGCACATCTGGAATAGGCCTAACCACTTGCCACGGTGGAAGGGGCCTTGCCCTTTTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GGAGACAGAGACAAAAGGGCAAGGCCCCTTCCACCGTaGCAAGTGGTTAGGCCTATTCCAGATGTGCACCTT +
Preference number: 3 (lower is better)
Translates to: GDRDKRARPLPP*QVVRPIPDVHL
Trigger: AAGGTGCACATCTGGAATAGGCCTAACCACTTGCCACGGTGGAAGGGGCCTTGCCCTTTTGTCTCTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATaGCTGTCCCTTTCCTGTCACCTCCGCACTAGTCTG +
Preference number: 3 (lower is better)
Translates to: ASYKLPGGDAHP*LSLSCHLRTSL
Trigger: CAGACTAGTGCGGAGGTGACAGGAAAGGGACAGCCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp TGTGTGAGGCATTCTTCTATTCGGGGCTGGCCTATATaGTCAGACAGAGCCAGCCAGCCATGGTCCTGCTCA +
Preference number: 3 (lower is better)
Translates to: CVRHSSIRGWPI*SDRASQPWSCS
Trigger: TGAGCAGGACCATGGCTGGCTGGCTCTGTCTGATCATATAGGCCAGCCCCGAATAGAAGAATGCCTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CAACTCACTGGCCAACACAACTGCCCAGGAGCCACCTaGGCCCCCACAAAGTGCTCAAATTTCATCAGTGAC +
Preference number: 3 (lower is better)
Translates to: QLTGQHNCPGAT*APTKCSNFISD
Trigger: GTCACTGATGAAATTTGAGCACTTTGTGGGGGCTCAGGTGGCTCCTGGGCAGTTGTGTTGGCCAGTGAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CAGATGTTAACTCCATACGGTTGTTTGTCCATGGCATaGAGGCCCTTCCAGGTGGGCATCCACGCAGGGCAA +
Preference number: 3 (lower is better)
Translates to: QMLTPYGCLSMA*RPFQVGIHAGQ
Trigger: TTGCCCTGCGTGGATGCCCACCTGGAAGGGCCTTCATGCCATGGACAAACAACCGTATGGAGTTAACATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CACCTTCTCTGTTCTGTGCAGCCTTGGAGAACAATCTaGTGTGATGACGACCTCGTTCGCATTCCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: HLLCSVQPWRTI*CDDDLVRIPGD
Trigger: GTCCCCAGGAATGCGAACGAGGTCGTCATCACAGCAGATTGTTCTCCAAGGCTGCACAGAACAGAGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp ACGTTCCTTGTGAGGGAGGGCACCTTCTCTGTTCTGTaGAGCCTTGGAGAACAATCTGCTGTGATGACGACC +
Preference number: 3 (lower is better)
Translates to: TFLVREGTFSVL*SLGEQSAVMTT
Trigger: GGTCGTCATCACAGCAGATTGTTCTCCAAGGCTGCACAGAACAGAGAAGGTGCCCTCCCTCACAAGGAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GGCTATACTTCAGGCTGTGTCCTGGTCCCTACCCTCTaGCATTCAGTGCACACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: GYTSGCVLVPTL*HSVHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGCACTGAATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAGTATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CTGCCAGAAATACCTGGCTATGGAGGAGAAGAGAGATaGTTGGTGATGGAGCCTGAGAGGCATGTGCTTCCG +
Preference number: 3 (lower is better)
Translates to: LPEIPGYGGEER*LVMEPERHVLP
Trigger: CGGAAGCACATGCCTCTCAGGCTCCATCACCAACCATCTCTCTTCTCCTCCATAGCCAGGTATTTCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GGGGACAGCAATTCCTCTTCTGAGGAGCTGTTGACTTaGCTTGCGCTTCAGCTGAGACCGCTCTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: GDSNSSSEELLT*LALQLRPLFSS
Trigger: AGAAGAGAAGAGCGGTCTCAGCTGAAGCGCAAGCCAAGTCAACAGCTCCTCAGAAGAGGAATTGCTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp AGGAGGCAGCTACTCCCTTCCTACCCTGGGGGCCTCTaGAGGTCTTATATCCTGTCCCTGAAAGCTTTCTTT +
Preference number: 3 (lower is better)
Translates to: RRQLLPSYPGGL*RSYILSLKAFF
Trigger: AAAGAAAGCTTTCAGGGACAGGATATAAGACCTCCAGAGGCCCCCAGGGTAGGAAGGGAGTAGCTGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTAATCTTCCAGGAGGCAGCTACTCCCTTCCTACCCTaGGGGCCTCTGGAGGTCTTATATCCTGTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: LIFQEAATPFLP*GPLEVLYPVPE
Trigger: TTCAGGGACAGGATATAAGACCTCCAGAGGCCCCCAGGGTAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CAGAGACCAACATCCATCCAGCTGTGGAGGCCCCTATaGCCCTGTCATGCTCTCTGTAAGGACACTTTTTGC +
Preference number: 3 (lower is better)
Translates to: QRPTSIQLWRPL*PCHALCKDTFC
Trigger: GCAAAAAGTGTCCTTACAGAGAGCATGACAGGGCCATAGGGGCCTCCACAGCTGGATGGATGTTGGTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CGCACAGGATTGGACCCAATTCTCAGATCTGTCCACTaGACTGGGTGGGTCCCAGATGTTAACTCCATACGG +
Preference number: 3 (lower is better)
Translates to: RTGLDPILRSVH*TGWVPDVNSIR
Trigger: CCGTATGGAGTTAACATCTGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CTGTGCAAGGCCAGGCGCTGCCATCTTGAATCTCTCTaGTTCCTTGATAGCTCCCTGCCACTTTGTACCTGT +
Preference number: 3 (lower is better)
Translates to: LCKARRCHLESL*FLDSSLPLCTC
Trigger: ACAGGTACAAAGTGGCAGGGAGCTATCAAGGAACCAGAGAGATTCAAGATGGCAGCGCCTGGCCTTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGAACGCAGGATTTGAATaGGAACTTAGGTACATGTCT +
Preference number: 3 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRNAGFE*ELRYMS
Trigger: AGACATGTACCTAAGTTCCAATTCAAATCCTGCGTT...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp GAGGCCTTTGCCACCCAGGATCCTCTGACATCTGGGTaGTTTCAGATGCAGCTTGACAACTTTCCAGGCTAC +
Preference number: 3 (lower is better)
Translates to: EAFATQDPLTSG*FQMQLDNFPGY
Trigger: GTAGCCTGGAAAGTTGTCAAGCTGCATCTGAAATCACCCAGATGTCAGAGGATCCTGGGTGGCAAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GGTTTCAAACCTCCAGAGATGGAACCACAGGCCATCTaGTCATCCCTTTGGCTGTCACCTTCTCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: GFKPPEMEPQAI*SSLWLSPSLAS
Trigger: AGAAGCCAGAGAAGGTGACAGCCAAAGGGATGAGCAGATGGCCTGTGGTTCCATCTCTGGAGGTTTGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp ACTGGTGTCCCCCAGTTCTCAGTTCTCAACCCATATTaGTCACCCTGGTCCCTGATCAGAGACCAACATCCA +
Preference number: 3 (lower is better)
Translates to: TGVPQFSVLNPY*SPWSLIRDQHP
Trigger: TGGATGTTGGTCTCTGATCAGGGACCAGGGTGAGCAATATGGGTTGAGAACTGAGAACTGGGGGACACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GTCTTCAGGGCACACAAGCCTGCACACAAATGTGGATaGACACGAGTGTGGATGTACACGCACTCACACAAG +
Preference number: 3 (lower is better)
Translates to: VFRAHKPAHKCG*TRVWMYTHSHK
Trigger: CTTGTGTGAGTGCGTGTACATCCACACTCGTGTGCATCCACATTTGTGTGCAGGCTTGTGTGCCCTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CCAGCCAGCCATGGTCCTGCTCAGGTATGTCCCATCTaGTCCATCCAAACCAATCTTTGTGTTTCCCATTGC +
Preference number: 3 (lower is better)
Translates to: PASHGPAQVCPI*SIQTNLCVSHC
Trigger: GCAATGGGAAACACAAAGATTGGTTTGGATGGAGCAGATGGGACATACCTGAGCAGGACCATGGCTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GGGCCAGAATGGCCTTGTGTCTCTGTGTTGGGTCTTTaGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: GPEWPCVSVLGL*LIFQEAATPFL
Trigger: TAGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CCCCAGTTCTCAGTTCTCAACCCATATTGCTCACCCTaGTCCCTGATCAGAGACCAACATCCATCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: PQFSVLNPYCSP*SLIRDQHPSSC
Trigger: ACAGCTGGATGGATGTTGGTCTCTGATCAGGGACCAGGGTGAGCAATATGGGTTGAGAACTGAGAACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTaGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: CSDAGAYSREWL*GVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTTGACGTGGTCCACAGTACTGATGCTGGCAAGGTCTaGCTTGATCCAGAGGGCTGTGTAAACCTGACCTCT +
Preference number: 3 (lower is better)
Translates to: FDVVHSTDAGKV*LDPEGCVNLTS
Trigger: AGAGGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACTGTGGACCACGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp AGAAATTCTGCATGTCCACAAAGGGCACCCCCTGAATaGCCCAGAGACCAGTGTGTGGGAACCTTGTTGAGT +
Preference number: 3 (lower is better)
Translates to: RNSACPQRAPPE*PRDQCVGTLLS
Trigger: ACTCAACAAGGTTCCCACACACTGGTCTCTGGGCCATTCAGGGGGTGCCCTTTGTGGACATGCAGAATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGCGACTGCTGGCTTGTTaGCCAGCAAAGTTGGTCTAT +
Preference number: 3 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGARLLAC*PAKLVY
Trigger: ATAGACCAACTTTGCTGGCAAACAAGCCAGCAGTCG...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCGGGGCCAGAATGGCCTaGTGTCTCTGTGTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLGARMA*CLCVGS
Trigger: AGACCCAACACAGAGACACAAGGCCATTCTGGCCCC...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGCAGAAAAGTGAGGGATaGTGGGTGACTGGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVQKSEG*WVTGVP
Trigger: GGGGACACCAGTCACCCACAATCCCTCACTTTTCTG...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp ACCCTGGGGGCCTCTGGAGGTCTTATATCCTGTCCCTaGAAGCTTTCTTTCTTTAGGGGGCTCATTAGGTTG +
Preference number: 3 (lower is better)
Translates to: TLGASGGLISCP*KLSFFRGLIRL
Trigger: CAACCTAATGAGCCCCCTAAAGAAAGAAAGCTTTCAGGGACAGGATATAAGACCTCCAGAGGCCCCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CATTTTCCTCTGGCACTAGGTACTGGGACTAGACTGTaGTATTGGCTCAGGGATCAACGACTAGCAAGGCCG +
Preference number: 3 (lower is better)
Translates to: HFPLALGTGTRL*YWLRDQRLARP
Trigger: CGGCCTTGCTAGTCGTTGATCCCTGAGCCAATATCACAGTCTAGTCCCAGTACCTAGTGCCAGAGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp CACACACACACTCGTCCTAAAGGAGGCCCCTATTCCTaGCTGCTAGGGCTGTGTTATATCTGTCCTTCATCA +
Preference number: 3 (lower is better)
Translates to: HTHTRPKGGPYS*LLGLCYICPSS
Trigger: TGATGAAGGACAGATATAACACAGCCCTAGCAGGCAGGAATAGGGGCCTCCTTTAGGACGAGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp ACACCCCGTCCCTTCTCCCATCACAGTCTACATATGTaGATAGCCTCGAAAGAACATGACACGTCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: TPRPFSHHSLHM*IASKEHDTSAV
Trigger: CACTGCAGACGTGTCATGTTCTTTCGAGGCTATGCACATATGTAGACTGTGATGGGAGAAGGGACGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp TTCCACCGTGGCAAGTGGTTAGGCCTATTCCAGATGTaGACCTTGCTCCAACAACCTGGGACATCCAGATAT +
Preference number: 3 (lower is better)
Translates to: FHRGKWLGLFQM*TLLQQPGTSRY
Trigger: ATATCTGGATGTCCCAGGTTGTTGGAGCAAGGTGCACATCTGGAATAGGCCTAACCACTTGCCACGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATaGCTTTGGGGCGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LSCSDAGAYSRE*LWGVCVCVCVC
Trigger: ACACACACACACACACACACACACGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CTTGCATATGTGAGGCCTTTGCCACCCAGGATCCTCTaGCATCTGGGTGATTTCAGATGCAGCTTGACAACT +
Preference number: 3 (lower is better)
Translates to: LAYVRPLPPRIL*HLGDFRCSLTT
Trigger: AGTTGTCAAGCTGCATCTGAAATCACCCAGATGTCAGAGGATCCTGGGTGGCAAAGGCCTCACATATGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp GTACCAAACACCTCCTTTCCACACAGCTTTTCATGTTaGCAAGGGGCTGCTGCTGTTGGTGAAGCCATATTG +
Preference number: 3 (lower is better)
Translates to: VPNTSFPHSFSC*QGAAAVGEAIL
Trigger: CAATATGGCTTCACCAACAGCAGCAGCCCCTTGGCAACATGAAAAGCTGTGTGGAAAGGAGGTGTTTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTTCTTCTGCTGGCCTACCAATGTCAACTGAGTCTTTaGACGTTCCTTGTGAGGGAGGGCACCTTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: FLLLAYQCQLSL*TFLVREGTFSV
Trigger: AACAGAGAAGGTGCCCTCCCTCACAAGGAACGTCCAAAGACTCAGTTGACATTGGTAGGCCAGCAGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTGGACCCAATTCTCAGATCTGTCCACTGGACTGGGTaGGTCCCAGATGTTAACTCCATACGGTTGTTTGTC +
Preference number: 3 (lower is better)
Translates to: LDPILRSVHWTG*VPDVNSIRLFV
Trigger: GACAAACAACCGTATGGAGTTAACATCTGGGACCCACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp AGGGCTGTGTTATATCTGTCCTTCATCACCAGCGGCTaGAACTCACACACAGAAAGTCAAACACGCAGACAT +
Preference number: 3 (lower is better)
Translates to: RAVLYLSFITSG*NSHTESQTRRH
Trigger: ATGTCTGCGTGTTTGACTTTCTGTGTGTGAGTTCCAGCCGCTGGTGATGAAGGACAGATATAACACAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp CCAGATATATCTTACTCAGAGATCTGCGCACAGGATTaGACCCAATTCTCAGATCTGTCCACTGGACTGGGT +
Preference number: 3 (lower is better)
Translates to: PDISYSEICAQD*TQFSDLSTGLG
Trigger: ACCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCTGTTATAAAATGGTATaGGACAACAGAAGACAGTGG +
Preference number: 3 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFCYKMV*DNRRQW
Trigger: CCACTGTCTTCTGTTGTCCAATACCATTTTATAACA...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp ATCTGCTCCATCCAAACCAATCTTTGTGTTTCCCATTaGTCCTCAGAGCATTTGTGTGTTCCAGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: ICSIQTNLCVSH*SSEHLCVPASA
Trigger: AGCTGAGGCTGGAACACACAAATGCTCTGAGGAGCAATGGGAAACACAAAGATTGGTTTGGATGGAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR GCA 72 bp AACCTGGGACATCCAGATATATCTTACTCAGAGATCTaGGCACAGGATTGGACCCAATTCTCAGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: NLGHPDISYSEI*AQDWTQFSDLS
Trigger: GGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGGATGTCCCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp TTTTACAAGTATTTGGCTATACTTCAGGCTGTGTCCTaGTCCCTACCCTCTGCCATTCAGTGCACACACACA +
Preference number: 3 (lower is better)
Translates to: FYKYLAILQAVS*SLPSAIQCTHT
Trigger: TGTGTGTGTGCACTGAATGGCAGAGGGTAGGGACCAGGACACAGCCTGAAGTATAGCCAAATACTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR-3UTR CAA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACATCCTTTTACAAGTATTaGGCTATACTTCAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTSFYKY*AILQAV
Trigger: CACAGCCTGAAGTATAGCCAAATACTTGTAAAAGGA...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp CTCTGTAAGGACACTTTTTGCCTAACCCCTCACATCTaGTCCTTTCCAATGACCATGACGGTTTCAAACCTC +
Preference number: 3 (lower is better)
Translates to: LCKDTFCLTPHI*SFPMTMTVSNL
Trigger: GAGGTTTGAAACCGTCATGGTCATTGGAAAGGATCAGATGTGAGGGGTTAGGCAAAAAGTGTCCTTACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR TCA 72 bp TCACAGTCTACATATGTGCATAGCCTCGAAAGAACATaGCACGTCTGCAGTGTCATGCACAAAAGCACATGT +
Preference number: 3 (lower is better)
Translates to: SQSTYVHSLERT*HVCSVMHKSTC
Trigger: ACATGTGCTTTTGTGCATGACACTGCAGACGTGTCATGTTCTTTCGAGGCTATGCACATATGTAGACTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp ACTAACTGCTCTGCTGCCTCAACGCAGGATTTGAATTaGAACTTAGGTACATGTCTGCACATACATGGGTAT +
Preference number: 3 (lower is better)
Translates to: TNCSAASTQDLN*NLGTCLHIHGY
Trigger: ATACCCATGTATGTGCAGACATGTACCTAAGTTCCAATTCAAATCCTGCGTTGAGGCAGCAGAGCAGTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CCA 72 bp GTGTGTTATAAAATGGTATTGGACAACAGAAGACAGTaGTTAAAGACTACAGCGGATGAGAACGGAGTTGAC +
Preference number: 3 (lower is better)
Translates to: VCYKMVLDNRRQ*LKTTADENGVD
Trigger: GTCAACTCCGTTCTCATCCGCTGTAGTCTTTAACCACTGTCTTCTGTTGTCCAATACCATTTTATAACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGGCCCGGGGAGCTGCCTaGAGTCGCTCCATGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRARGAA*SRSMAH
Trigger: GTGGGCCATGGAGCGACTGCAGGCAGCTCCCCGGGC...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp GACCCTCATCAGCGGCAGCTGGAGATTTCGGTGCGCTaGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAG +
Preference number: 4 (lower is better)
Translates to: DPHQRQLEISVR*AVAAGAGLAFK
Trigger: CTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGCGCACCGAAATCTCCAGCTGCCGCTGATGAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTGGCTGCAGTCGAAGATaGTCCGGAACTCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRGCSRR*SGTPCP
Trigger: GGGGCAGGGAGTTCCGGATCATCTTCGACTGCAGCC...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTCGGCGGCCAGGACGATaGAGATGCCGCCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRRRPGR*RCRRSS
Trigger: AGAAGATCGGCGGCATCTTCATCGTCCTGGCCGCCG...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTGGCCACCGATCTGGGTaGGGTTGCAGTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRGHRSG*GCSSSV
Trigger: CACAGAGGAACTGCAACCTCACCCAGATCGGTGGCC...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGCACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTTGCCTTCCTCTGCGCGCCGATCTTCTGGATaGCCAGGGCGCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PARDEDVRPFGSPLPSSARRSSG*PGRWPP
Trigger: AGGAGGCCAGCGCCCTGGGCATCCAGAAGATCGGCG...CGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGTGCTTGAGACGCCGTTaGCAGGTGAGGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRCLRRR*QVREKR
Trigger: CCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCA...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTATAGACCACGGTGGCTaGTCGCCACTTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRIDHGG*SPLEGL
Trigger: CAGTCCCTCAAGTGGCGATCAGCCACCGTGGTCTAT...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTTGGACTGGACAGCATTaGTGCAGGAGCCCTGCGATG +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRWTGQH*CRSPAM
Trigger: CATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCA...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTGGATCTGGGCTGCCATaGTGTGGCTGCAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRGSGLP*CGCSRR
Trigger: TCTTCGACTGCAGCCACACCATGGCAGCCCAGATCC...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp GCACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTaGCCTTCCTCTGCGTGGACTGGGCCTGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARDEDVRPFGSP*PSSAWTGPEVP
Trigger: GGGGACTTCAGGCCCAGTCCACGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp CCAGCGTGGCTTCTCCTATCATCATGTGCACTGGGCTaGGCTGCGAGTCTCCCCTTTCCTCCCTCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PAWLLLSSCALG*AASLPFPPSPS
Trigger: ACTGGGGGAGGGAGGAAAGGGGAGACTCGCAGCCAAGCCCAGTGCACATGATGATAGGAGAAGCCACGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp ATCCAAACACCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTGGCTGCGTCATCCCGCGCGAGTCTaGGATCCAGAAGGCGCACAC +
Preference number: 4 (lower is better)
Translates to: IQTPIRCPESESLLSWLRHPARV*DPEGAH
Trigger: GTGTGCGCCTTCTGGATCCCAGACTCGCGCGGGATG...ACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGGTGTTTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGACCATCATAGGAGGCTaGGGCTTGTGCTTGAGACGC +
Preference number: 4 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRTIIGG*GLCLRR
Trigger: GCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGT...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGTCTCTCGGACATGGGTaGTGGTCAGGGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CARCPASYKLPGGDAHPWSLGHG*WSGEPQ
Trigger: CTGTGGCTCCCCTGACCATCACCCATGTCCGAGAGA...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCAACTGGACAGCATTGGTaGAGGAGCCCTGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPTGQHW*RSPAMA
Trigger: GGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGT...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGCCTGGGCCCCGTACTTaGCGTCTTCCACCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAPGPRT*RLPPAG
Trigger: TCCGGCTGGTGGAAGACGGCAAGTACGGGGCCCAGG...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCGGGCTAGCGAGGTGCTaGAGCTCATGCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGGLARC*SSCCPC
Trigger: GCAAGGACAGCATGAGCTGCAGCACCTCGCTAGCCC...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGGCGTTGCAAATGGACTaGACAGCATTGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRALQMD*TALVQE
Trigger: CTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGC...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCGCCACTTGAGGGACTaGACCAAGTCGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGRHLRD*TKSRMA
Trigger: CGCCATCCTCGACTTGGTCCAGTCCCTCAAGTGGCG...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGGCTGTGAGCGTCCGCTaGATGCCCTCCTCGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CARCPASYKLPGGDAHPWAVSVR*MPSSLF
Trigger: GAACAACGAGGAGGGCATCCAGCGGACGCTCACAGC...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACATTCCTCCGATCCGGATaGCGTGGGGCATCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTFLRSG*RGASRA
Trigger: CGCGCGGGATGCCCCACGTCATCCGGATCGGAGGAA...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCGCTCTTCAGCGTTCATaGCCTGGGCGTTGGGACCAT +
Preference number: 4 (lower is better)
Translates to: SPCAFSHGALRKAVASDPALQRS*PGRWDH
Trigger: ATGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGC...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCCCGCTTCATCTCTTTaGGCAAGGGGCGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGPASSL*ARGGSH
Trigger: ATGACTCCCGCCCCTTGCTCAAAGAGATGAAGCGGG...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTACCATCCAGCAGGCCTaGCTCTGCCCGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAATIQQA*LCPGSC
Trigger: GCAGCTCCCCGGGCAGAGTCAGGCCTGCTGGATGGT...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGTTGGTGCAGGAGCCCTaGGATGGCCCAAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: CARCPASYKLPGGDAHPWLVQEP*DGPKMA
Trigger: AGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAA...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCCTCTGAGCCGGGGTTaGAGGGATGAGCATCATACC +
Preference number: 4 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGPLSRG*RDEHHT
Trigger: GGTATGATGCTCATCCCTGCAACCCCGGCTCAGAGG...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGCACAGGCCTTCTTGGTaGCCTCAAAACTGTCATGGA +
Preference number: 4 (lower is better)
Translates to: SEHSGVRALGASGLCGARHRPSW*PQNCHG
Trigger: TCCATGACAGTTTTGAGGCCACCAAGAAGGCCTGTG...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCCCTGCAGTCGCTCCATaGCCCACTTCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: SPCAFSHGALRKAVASDPPAVAP*PTSPQW
Trigger: CCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAGG...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGCATGCTGTCCTTGCCTaGCAGCCTTCGGTCATTAAA +
Preference number: 4 (lower is better)
Translates to: SEHSGVRALGASGLCGARHAVLA*QPSVIK
Trigger: TTTAATGACCGAAGGCTGCCAGGCAAGGACAGCATG...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp TCAGAGCACAGTGGCGTGAGGGCTCTTGGAGCCTCTGGTCTCTGTGGAGCCAGGGAAAATCGAAAGGCGTaGTCTTCAGCGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: SEHSGVRALGASGLCGARENRKA*SSAFMT
Trigger: GGTCATGAACGCTGAAGAGCACGCCTTTCGATTTTC...CCTGGCTCCACAGAGACCAGAGGCTCCAAGAGCCCTCACGCCACTGTGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGCACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTTGCCTTCCTCTGCGAGTATTCCGTCATCATaGCCATGGCCATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PARDEDVRPFGSPLPSSASIPSS*PWPWPA
Trigger: AGCAGGCCATGGCCATGGGCATGATGACGGAATACT...CGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTATCAGTTCAGATCCTTaGTGCATCAGGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRISSDP*CIREPI
Trigger: AATGGGCTCCCTGATGCAGCAAGGATCTGAACTGAT...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp ATGTGCTTCCGCTGGCCTTCACAGCTTCAGAAAGCCATAGACAAGACAAGAGGACCGATCCGGATGACGTaGGGCATCCCGCGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: MCFRWPSQLQKAIDKTRGPIRMT*GIPRES
Trigger: AGACTCGCGCGGGATGCCCCACGTCATCCGGATCGG...TCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGTGAAGGCCAGCGGAAGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCGCCTGCTTGAGGATCTaGGCTGCCATGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTACLRI*AAMVWL
Trigger: CAGCCACACCATGGCAGCCCAGATCCTCAAGCAGGC...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTGCCAGATCTGCTTTGTaGTCAATGAGTTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRARSAL*SMSSLT
Trigger: GGTCAAGGAACTCATTGACCACAAAGCAGATCTGGC...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACATGGCCATGGCCTGCTTaGGGATCTGGGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTWPWPA*GSGLPW
Trigger: CCATGGCAGCCCAGATCCTCAAGCAGGCCATGGCCA...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCACAGACTTGCGGAACATaGCAAAAGGCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPQTCGT*QKAPPA
Trigger: TGCTGGAGGAGCCTTTTGTCATGTTCCGCAAGTCTG...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTGACGCCGTTGGCAGGTaGGGGAGAAGCGGATCTCGT +
Preference number: 4 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAADAVGR*GRSGSR
Trigger: ACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTC...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCCCATGGGTGTGCCGATaGCATAGCCCTTGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFPWVCR*HSPWSR
Trigger: TCGACTCCAAGGGCTATGGCATCGGCACACCCATGG...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp ATGTGCTTCCGCTGGCCTTCACAGCTTCAGAAAGCCATAGACAAGACAAGAGGAGGAGGCTGGGGCTTGTaGTTGAGACGCCGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MCFRWPSQLQKAIDKTRGGGWGL*LRRRWQ
Trigger: CTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCC...TCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGTGAAGGCCAGCGGAAGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCGTCCTTGTTGTCCAGTaGGTGGTGCTTCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFVLVVQ*VVLPAQ
Trigger: CTGCGCTGGAAGCACCACCCACTGGACAACAAGGAC...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCGTTCACGGTCATCTGTaGCGCTCGCTGGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTVHGHL*RSLVAH
Trigger: GTGTGCTACCAGCGAGCGCCACAGATGACCGTGAAC...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAGGTAGGGGGAGCCCATaGGTGTGCCGATGCCATAGC +
Preference number: 4 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTGRGSP*VCRCHS
Trigger: GCTATGGCATCGGCACACCCATGGGCTCCCCCTACC...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTCGAGGATGGCGTGGCTaGGAGAGGCATAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAARGWRG*ERHSQG
Trigger: ACCCTGACTATGCCTCTCTCAGCCACGCCATCCTCG...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCAAGTGGTGACGATGAGTaGCCTATTGGTCAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPSGDDE*PIGQRV
Trigger: GACTCTCTGACCAATAGGTCACTCATCGTCACCACT...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCGAACCTCCAAGGCGTTaGAAATGGACTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGEPPRR*KWTGQH
Trigger: ATGCTGTCCAGTCCATTTGCAACGCCTTGGAGGTTC...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCAGCCATGATGAGTTCCTaGAGACGGATGAGACCTGTA +
Preference number: 4 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPAMMSS*RRMRPV
Trigger: TACAGGTCTCATCCGTCTGCAGGAACTCATCATGGC...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CCAGCACGAGATGAGGATGTCCGTCCTTTCGGGTCTCCTTTGCCTTCCTCTGCGCCTCAAACCGGTCATTaGCATAAAGGGTCCTATCAG +
Preference number: 4 (lower is better)
Translates to: PARDEDVRPFGSPLPSSAPQTGH*HKGSYQ
Trigger: CTGATAGGACCCTTTATGGCAATGACCGGTTTGAGG...CGCAGAGGAAGGCAAAGGAGACCCGAAAGGACGGACATCCTCATCTCGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp TGGTCTCCAGGCTGTTTGGGACTGGGCTGGTCTCTAGAACAAACACAGGACTTCGAAGCCCAGGATGTGTaGCAGCTCCTTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: WSPGCLGLGWSLEQTQDFEAQDV*QLLEQV
Trigger: GACTTGCTCAAGGAGCTGGCACACATCCTGGGCTTC...GAAGTCCTGTGTTTGTTCTAGAGACCAGCCCAGTCCCAAACAGCCTGGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCACCCACTTCTCCACAATaGCTGAGACATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPPTSPQ*LRHGDC
Trigger: ACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGG...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGGGATGCCCAGGGCGCTaGCCTCCTTGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVGCPGR*PPCSPP
Trigger: AGGAGGAGAACAAGGAGGCCAGCGCCCTGGGCATCC...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp ATGGTAGAGAACCCAGGGTCCCGACTGCTGGCTTGTTaGCCAGCAAAGTTGGTCTATTGGTTGAAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MVENPGSRLLAC*PAKLVYWLKGL
Trigger: CAGGCCCTTCAACCAATAGACCAACTTTGCTGGCAAACAAGCCAGCAGTCGGGACCCTGGGTTCTCTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp GGGGCCAGAATGGCCTTGTGTCTCTGTGTTGGGTCTTaGGTTAATCTTCCAGGAGGCAGCTACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GARMALCLCVGS*VNLPGGSYSLP
Trigger: AGGAAGGGAGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp GACTGGTGTCCCCCAGTTCTCAGTTCTCAACCCATATaGCTCACCCTGGTCCCTGATCAGAGACCAACATCC +
Preference number: 4 (lower is better)
Translates to: DWCPPVLSSQPI*LTLVPDQRPTS
Trigger: GGATGTTGGTCTCTGATCAGGGACCAGGGTGAGCAATATGGGTTGAGAACTGAGAACTGGGGGACACCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTGCAGAATGGCGATGGTaGTTTTGTCCCGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAAAEWRW*FCPGRG
Trigger: CCCCCTACCGGGACAAAATCACCATCGCCATTCTGC...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCCCCATGGCCATGGCCTaGTTGAGGATCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLPMAMA*LRIWAA
Trigger: GGCAGCCCAGATCCTCAAGCAGGCCATGGCCATGGG...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp ATCCAAACACCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTGGCTGCGTTACTCTATTTTGGTCTaGTTGGCCAGGTCATCAGCG +
Preference number: 4 (lower is better)
Translates to: IQTPIRCPESESLLSWLRYSILV*LARSSA
Trigger: CGCTGATGACCTGGCCAAGCAGACCAAAATAGAGTA...ACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGGTGTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGGAGTCAATCGGGAGCTaGCGAATCTTCAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAESIGS*RIFRRM
Trigger: CATTCGCCTGAAGATTCGCCAGCTCCCGATTGACTC...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAACCATGCCGTTCCACTaGCCTTTGTCATCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTTMPFH*PLSSWA
Trigger: GGCCCAGGATGACAAAGGCCAGTGGAACGGCATGGT...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp TCCACGCAGGGCAATTCCAGAGGTGGACCATGGAGTTaGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: STQGNSRGGPWS*SCSDAGAYSRE
Trigger: TTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGCCCTGCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp TGGGTCCCCACCCATACTGGCTGGGTTCTGTACACTTaGTGTGTAGACGTGCAGGGAAGGGTTGTATACACA +
Preference number: 4 (lower is better)
Translates to: WVPTHTGWVLYT*CVDVQGRVVYT
Trigger: TGTGTATACAACCCTTCCCTGCACGTCTACACACAAAGTGTACAGAACCCAGCCAGTATGGGTGGGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGAGCCACTGGTTTTGTTaGACACAATCCGTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: CARCPASYKLPGGDAHPWSHWFC*TQSVQL
Trigger: TAACTGGACGGATTGTGTTCAACAAAACCAGTGGCT...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACATGTGTGCCAGCTCCTTaGGCAAGTCGATGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTCVPAP*ASRCSS
Trigger: GCTACTGCATCGACTTGCTCAAGGAGCTGGCACACA...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCATTCTCCACCACCTCTaGGCCGGGGTTGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLILHHL*AGVAGM
Trigger: CATCCCTGCAACCCCGGCTCAGAGGTGGTGGAGAAT...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGGCTACAACACCCAGTaGCAACTGGTCACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTGYNTQ*QLVTGL
Trigger: AAGGCCTGTGACCAGTTGGCACTGGGTGTTGTAGCC...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp GGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGTAGGGAATGGCTTTGGGGCGTGGTGCCATTGGGCTTaGGGTATAAGATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: GVCHVQMLVPTVGNGFGAWCHWA*GIRCSL
Trigger: GAGTGAGCATCTTATACCGCAAGCCCAATGGCACCA...CGCCCCAAAGCCATTCCCTACTGTAGGCACCAGCATCTGAACATGACAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR GCA 90 bp ATCCAAACACCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTGGCTGCGTTTCTCCTTCATGATGTaGAGTTTGTCCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IQTPIRCPESESLLSWLRFSFMM*SLSSSC
Trigger: ACAGGAGGAGGACAAACTGCACATCATGAAGGAGAA...ACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGGTGTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp ATGTGCTTCCGCTGGCCTTCACAGCTTCAGAAAGCCATAGACAAGACAAGAGGATTGTTGTCCAGTGGGTaGTGCTTCCAGCGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: MCFRWPSQLQKAIDKTRGLLSSG*CFQRSW
Trigger: CCAACTGCGCTGGAAGCACCACCCACTGGACAACAA...TCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGTGAAGGCCAGCGGAAGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACATGGGCTGCCATGGTGTaGCTGCAGTCGAAGATGATC +
Preference number: 4 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTWAAMV*LQSKMI
Trigger: GATCATCTTCGACTGCAGCCACACCATGGCAGCCCA...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTCTTCTCCACAATGGCTaGGACATGGGGATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAALLHNG*DMGIVH
Trigger: GTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAG...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAAAGTCAGGGTCGTGTTaGGCAGCAGAGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTKSGSC*AAESCF
Trigger: GAAACAGGACTCTGCTGCCCAACACGACCCTGACTT...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACCAAGGCGTTGCAAATaGACTGGACAGCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTPRRCK*TGQHWC
Trigger: GCACCAATGCTGTCCAGTCCATTTGCAACGCCTTGG...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp AGAGATCAGGGGCCAGAATGGCCTTGTGTCTCTGTGTaGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTACT +
Preference number: 4 (lower is better)
Translates to: RDQGPEWPCVSV*GLWLIFQEAAT
Trigger: AGTAGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTCTGGCCCCTGATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACAGGTCACAGGCCTTCTTaGTGGCCTCAAAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTGHRPS*WPQNCH
Trigger: ATGACAGTTTTGAGGCCACCAAGAAGGCCTGTGACC...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp ATTTCTTCTGCTGGCCTACCAATGTCAACTGAGTCTTaGGACGTTCCTTGTGAGGGAGGGCACCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ISSAGLPMSTES*DVPCEGGHLLC
Trigger: ACAGAGAAGGTGCCCTCCCTCACAAGGAACGTCCAAAGACTCAGTTGACATTGGTAGGCCAGCAGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp TCCAGATATATCTTACTCAGAGATCTGCGCACAGGATaGGACCCAATTCTCAGATCTGTCCACTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SRYILLRDLRTG*DPILRSVHWTG
Trigger: CCCAGTCCAGTGGACAGATCTGAGAATTGGGTCCAATCCTGTGCGCAGATCTCTGAGTAAGATATATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR TCA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGGTTAATCCTTCCCATTaGGCCTCCTTGATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVVNPSH*ASLMKF
Trigger: GAACTTCATCAAGGAGGCTCAATGGGAAGGATTAAC...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CCA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCCACCGTACTCTATTTTaGTCTGCTTGGCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLHRTLF*SAWPGH
Trigger: ATGACCTGGCCAAGCAGACCAAAATAGAGTACGGTG...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp TGCCGTACTAACTGCTCTGCTGCCTCAACGCAGGATTaGAATTGGAACTTAGGTACATGTCTGCACATACAT +
Preference number: 4 (lower is better)
Translates to: CRTNCSAASTQD*NWNLGTCLHIH
Trigger: ATGTATGTGCAGACATGTACCTAAGTTCCAATTCAAATCCTGCGTTGAGGCAGCAGAGCAGTTAGTACGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
3UTR CAA 72 bp ATGAACATGGAGGTGGGTGTGTGTTATAAAATGGTATaGGACAACAGAAGACAGTGGTTAAAGACTACAGCG +
Preference number: 4 (lower is better)
Translates to: MNMEVGVCYKMV*DNRRQWLKTTA
Trigger: CGCTGTAGTCTTTAACCACTGTCTTCTGTTGTCCAATACCATTTTATAACACACACCCACCTCCATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGGTGCTTGAGACGCCGTaGGCAGGTGAGGGAGAAGCG +
Preference number: 5 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRVLETP*AGEGEA
Trigger: CGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCAC...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 90 bp ATAGAGCAGGGCAGCATCCGTCATCATCACACCATCCAGCAGGCCTaGCTCTGCCCGGGGAGCTGCCTGCAGTCGCTCCATGGCCCACTT +
Preference number: 5 (lower is better)
Translates to: IEQGSIRHHHTIQQA*LCPGSCLQSLHGPL
Trigger: AAGTGGGCCATGGAGCGACTGCAGGCAGCTCCCCGGGCAGAGTCAGGCCTGCTGGATGGTGTGATGATGACGGATGCTGCCCTGCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 90 bp AGAAGGAGCGCTGCTCCCGCTCCGCTGTCTTGCGGAGTTTGTATATaGACTCGCCCACTGCCACCAACACGGACAGGACCAAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RRSAAPAPLSCGVCI*TRPLPPTRTGPSRR
Trigger: CCGCCGGCTTGGTCCTGTCCGTGTTGGTGGCAGTGGGCGAGTTCATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGCGCTCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp ATCCAAACACCCATAAGGTGTCCCGAGTCGGAGTCTCTGCTCTCGTGGCTGCGTTCCTGGGCCCCGTACTaGCCGTCTTCCACCAGCCGG +
Preference number: 5 (lower is better)
Translates to: IQTPIRCPESESLLSWLRSWAPY*PSSTSR
Trigger: CCGGCTGGTGGAAGACGGCAAGTACGGGGCCCAGGA...ACGCAGCCACGAGAGCAGAGACTCCGACTCGGGACACCTTATGGGTGTTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp ATCATCACACCATCCAGCAGGCCTGACTCTGCCCGGGGAGCTGCCTaGAGTCGCTCCATGGCCCACTTCTCCACAATGGCTGAGACATGG +
Preference number: 5 (lower is better)
Translates to: IITPSSRPDSARGAA*SRSMAHFSTMAETW
Trigger: CCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAGGCAGCTCCCCGGGCAGAGTCAGGCCTGCTGGATGGTGTGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp AGGGAGAAGCGGATCTCGTCGGCCACTGTGCTGCAGAAGGAGCGCTaGTCCCGCTCCGCTGTCTTGCGGAGTTTGTATATGAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: REKRISSATVLQKER*SRSAVLRSLYMNSP
Trigger: GGGCGAGTTCATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGCGCTCCTTCTGCAGCACAGTGGCCGACGAGATCCGCTTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp GTCTTGACCATCATAGGAGGCTGGGGCTTGTGCTTGAGACGCCGTTaGCAGGTGAGGGAGAAGCGGATCTCGTCGGCCACTGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLTIIGGWGLCLRRR*QVREKRISSATVLQ
Trigger: CTGCAGCACAGTGGCCGACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCACCAAAGCGCCAGGCCTaGTGCCGATGGCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPPKRQA*CRWHCR
Trigger: CCTGCAGTGCCATCGGCACAAGGCCTGGCGCTTTGG...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTTGGATGCCCTCCTCGTaGTTCTTCACCAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRWMPSS*FFTRAE
Trigger: CTCGGCTCTGGTGAAGAACAACGAGGAGGGCATCCA...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGATGGTGGCCCCGTCCTaGACAGCACCGTACTCTATT +
Preference number: 5 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRMVAPS*TAPYSI
Trigger: AATAGAGTACGGTGCTGTCAAGGACGGGGCCACCAT...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 90 bp GGGAGCTGCCTGCAGTCGCTCCATGGCCCACTTCTCCACAATGGCTaGGACATGGGGATTGTCCACGTTGAGTATGCGGAACCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: GSCLQSLHGPLLHNG*DMGIVHVEYAEPSQ
Trigger: CTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAGGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp TGGACTGGACAGCATTGGTGCAGGAGCCCTGCGATGGCCCAAAGATaGCTACAACACCCAGTGCCAACTGGTCACAGGCCTTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: WTGQHWCRSPAMAQR*LQHPVPTGHRPSWW
Trigger: CCACCAAGAAGGCCTGTGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp GGCGTTGCAAATGGACTGGACAGCATTGGTGCAGGAGCCCTGCGATaGCCCAAAGATGGCTACAACACCCAGTGCCAACTGGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: GVANGLDSIGAGALR*PKDGYNTQCQLVTG
Trigger: GCCTGTGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGGATGCGGCCAGCAGCTCCATCCCCAAGGCCAGCACGAGATGAGGATGTCCGTTGGTCACAGGCCTTCTaGGTGGCCTCAAAACTGTCA +
Preference number: 5 (lower is better)
Translates to: WMRPAAPSPRPARDEDVRWSQAF*VASKLS
Trigger: TGACAGTTTTGAGGCCACCAAGAAGGCCTGTGACCA...ACGGACATCCTCATCTCGTGCTGGCCTTGGGGATGGAGCTGCTGGCCGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCATGGCCATGGCCTGCTaGAGGATCTGGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: SPCAFSHGALRKAVASDPMAMAC*RIWAAM
Trigger: CATGGCAGCCCAGATCCTCAAGCAGGCCATGGCCAT...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp GGTGCAGGAGCCCTGCGATGGCCCAAAGATGGCTACAACACCCAGTaGCAACTGGTCACAGGCCTTCTTGGTGGCCTCAAAACTGTCATG +
Preference number: 5 (lower is better)
Translates to: GAGALRWPKDGYNTQ*QLVTGLLGGLKTVM
Trigger: CATGACAGTTTTGAGGCCACCAAGAAGGCCTGTGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp TGTGGGGAACCTCCAAGGCGTTGCAAATGGACTGGACAGCATTGGTaGAGGAGCCCTGCGATGGCCCAAAGATGGCTACAACACCCAGTG +
Preference number: 5 (lower is better)
Translates to: CGEPPRRCKWTGQHW*RSPAMAQRWLQHPV
Trigger: CACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGCCTTGGAGGTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp TTGATAACCGCATCCGTCTTGACCATCATAGGAGGCTGGGGCTTGTaGTTGAGACGCCGTTGGCAGGTGAGGGAGAAGCGGATCTCGTCG +
Preference number: 5 (lower is better)
Translates to: LITASVLTIIGGWGL*LRRRWQVREKRISS
Trigger: CGACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGATGCGGTTATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGATGGACTGGACAGCATaGGTGCAGGAGCCCTGCGAT +
Preference number: 5 (lower is better)
Translates to: CARCPASYKLPGGDAHPWMDWTA*VQEPCD
Trigger: ATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCAT...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GCTTGGCCGTGGCTGCAGGAGCGGGCCTGGCTTTTAAGTGTAGATGGCCCAAGGTTGGTGCCATTGGGCTaGCGGTATAAGATGCTCACT +
Preference number: 5 (lower is better)
Translates to: AWPWLQERAWLLSVDGPRLVPLG*RYKMLT
Trigger: AGTGAGCATCTTATACCGCAAGCCCAATGGCACCAA...CCTTGGGCCATCTACACTTAAAAGCCAGGCCCGCTCCTGCAGCCACGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 90 bp TGGCCCACTTCTCCACAATGGCTGAGACATGGGGATTGTCCACGTTaGGTATGCGGAACCCAGTCAGGTTCACTCCCGAGTAGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: WPTSPQWLRHGDCPR*VCGTQSGSLPSSGR
Trigger: CCTACCGCTACTCGGGAGTGAACCTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp TCCAAGGCGTTGCAAATGGACTGGACAGCATTGGTGCAGGAGCCCTaGGATGGCCCAAAGATGGCTACAACACCCAGTGCCAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: SKALQMDWTALVQEP*DGPKMATTPSANWS
Trigger: TGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp GCCTGCAGTCGCTCCATGGCCCACTTCTCCACAATGGCTGAGACATaGGGATTGTCCACGTTGAGTATGCGGAACCCAGTCAGGTTCACT +
Preference number: 5 (lower is better)
Translates to: ACSRSMAHFSTMAET*GLSTLSMRNPVRFT
Trigger: AGTGAACCTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGGGAACCTCCAAGGCGTaGCAAATGGACTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: CARCPASYKLPGGDAHPWGTSKA*QMDWTA
Trigger: TGCTGTCCAGTCCATTTGCAACGCCTTGGAGGTTCC...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp ATCTCTTTGAGCAAGGGGCGGGAGTCATCCGAGTCAATCGGGAGCTaGCGAATCTTCAGGCGAATGTTGTACCTCGAAGGGGCCATGATG +
Preference number: 5 (lower is better)
Translates to: ISLSKGRESSESIGS*RIFRRMLYLEGAMM
Trigger: CATCATGGCCCCTTCGAGGTACAACATTCGCCTGAAGATTCGCCAGCTCCCGATTGACTCGGATGACTCCCGCCCCTTGCTCAAAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCGCAACCTCAGTGATATaGAGACCGTCAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: SPCAFSHGALRKAVASDPATSVI*RPSAGL
Trigger: GAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGC...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACCGTTCCACTGGCCTTaGTCATCCTGGGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTPFHWP*SSWAPY
Trigger: GTACGGGGCCCAGGATGACAAAGGCCAGTGGAACGG...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCCAGTGATCCCTGGTCAATGAGTTCCTaGACCATGCCGTTCCACTGG +
Preference number: 5 (lower is better)
Translates to: SPCAFSHGALRKAVASDPWSMSS*TMPFHW
Trigger: CCAGTGGAACGGCATGGTCAAGGAACTCATTGACCA...GGGATCACTGGCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGCGGGTAGACAGAGCTTaGGGCATCAGTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: CARCPASYKLPGGDAHPWRVDRA*GISSDP
Trigger: AGGATCTGAACTGATGCCCAAAGCTCTGTCTACCCG...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCTCTATTTTGGTCTGCTaGGCCAGGTCATCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGSILVC*ARSSAE
Trigger: CTCCGCTGATGACCTGGCCAAGCAGACCAAAATAGA...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp ATGTGCTTCCGCTGGCCTTCACAGCTTCAGAAAGCCATAGACAAGACAAGAGGAACCAGAGCCGAGGGCTaGCTGCTCATGAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: MCFRWPSQLQKAIDKTRGTRAEG*LLMKAH
Trigger: GTGGGCCTTCATGAGCAGCAAGCCCTCGGCTCTGGT...TCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGTGAAGGCCAGCGGAAGCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 90 bp AGGACCTCGGCCTTTGGCAACCTCAGTGATATTGAGACCGTCAGCTaGACTCCATACTCCAACCTTCTCGAGGCCATCTTCCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RTSAFGNLSDIETVS*TPYSNLLEAIFLQA
Trigger: AGCCTGAAGGAAGATGGCCTCGAGAAGGTTGGAGTATGGAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGCCGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTCCCCGCTTCATCTCTTaGAGCAAGGGGCGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAAPRFIS*SKGRES
Trigger: TGACTCCCGCCCCTTGCTCAAAGAGATGAAGCGGGG...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CCAGAAGGTGTCTCCCTGTGCATTTTCCCATGGAGCCCTCAGGAAAGCTGTGGCACGATGAGTGACCTATaGGTCAGAGAGTCAGTGACA +
Preference number: 5 (lower is better)
Translates to: PEGVSLCIFPWSPQESCGTMSDL*VRESVT
Trigger: TGTCACTGACTCTCTGACCAATAGGTCACTCATCGT...GCCACAGCTTTCCTGAGGGCTCCATGGGAAAATGCACAGGGAGACACCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCGCACCGTACTCTATTTaGGTCTGCTTGGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTAPYSI*VCLARS
Trigger: TGACCTGGCCAAGCAGACCAAAATAGAGTACGGTGC...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGGAGATCTTGGATTTCTaGAAGAAGGTCATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: CARCPASYKLPGGDAHPWEILDF*KKVMVA
Trigger: GGCCACCATGACCTTCTTCAAGAAATCCAAGATCTC...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 90 bp GCGGAACATGACAAAAGGCTCCTCCAGCACAGTGGTGACGATGAGTaGCCTATTGGTCAGAGAGTCAGTGACATTAGGACCTCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AEHDKRLLQHSGDDE*PIGQRVSDIRTSAF
Trigger: AAAGGCCGAGGTCCTAATGTCACTGACTCTCTGACCAATAGGTCACTCATCGTCACCACTGTGCTGGAGGAGCCTTTTGTCATGTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp ATGTGCTTCCGCTGGCCTTCACAGCTTCAGAAAGCCATAGACAAGACAAGAGGATTCATGACCTGGGCGTaGGGACCATCCGCATACTCA +
Preference number: 5 (lower is better)
Translates to: MCFRWPSQLQKAIDKTRGFMTWA*GPSAYS
Trigger: TGAGTATGCGGATGGTCCCAACGCCCAGGTCATGAA...TCCTCTTGTCTTGTCTATGGCTTTCTGAAGCTGTGAAGGCCAGCGGAAGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CCACTGCCGTCACCCAGTGGTCATTACCTCTCTGAACACCCTTCCCACCAACCACCAAACCAGAAGCTGTaGAGCAGTGTGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: PLPSPSGHYLSEHPSHQPPNQKL*SSVKLF
Trigger: GAATAACTTCACACTGCTCAACAGCTTCTGGTTTGG...TGGTTGGTGGGAAGGGTGTTCAGAGAGGTAATGACCACTGGGTGACGGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACCGATCTGGGTGAGGTaGCAGTTCCTCTGTGTGATG +
Preference number: 5 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTPIWVR*QFLCVM
Trigger: CATCACACAGAGGAACTGCAACCTCACCCAGATCGG...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CACACACATTTATTCACGCTTGCATCCATTATACACTCACCAGAGCCCCATCTCCAGCTCATGCTGTCCTaGCCTGGCAGCCTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: HTHLFTLASIIHSPEPHLQLMLS*PGSLRS
Trigger: TGACCGAAGGCTGCCAGGCAAGGACAGCATGAGCTG...GAGATGGGGCTCTGGTGAGTGTATAATGGATGCAAGCGTGAATAAATGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 90 bp AGAGTCCTGTTTCTGTTGATGATGTTGGCAGAAAATCGAAAGGCGTaGTCTTCAGCGTTCATGACCTGGGCGTTGGGACCATCCGCATAC +
Preference number: 5 (lower is better)
Translates to: RVLFLLMMLAENRKA*SSAFMTWALGPSAY
Trigger: GTATGCGGATGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGCACGCCTTTCGATTTTCTGCCAACATCATCAACAGAAACAGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp TGTGCCCGCTGTCCTGCCTCATACAAACTCCCTGGAGGAGATGCTCATCCATGGTTTCTGTTGATGATGTaGGCAGAAAATCGAAAGGCG +
Preference number: 5 (lower is better)
Translates to: CARCPASYKLPGGDAHPWFLLMM*AENRKA
Trigger: CGCCTTTCGATTTTCTGCCAACATCATCAACAGAAA...CCATGGATGAGCATCTCCTCCAGGGAGTTTGTATGAGGCAGGACAGCGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GCAATTCCAGAGGTGGACCATGGAGTTTGTCATGTTCAGATGCTGGTGCCTACACATCAGTTCAGATCCTaGCTGCATCAGGGAGCCCAT +
Preference number: 5 (lower is better)
Translates to: AIPEVDHGVCHVQMLVPTHQFRS*LHQGAH
Trigger: ATGGGCTCCCTGATGCAGCAAGGATCTGAACTGATG...TGTAGGCACCAGCATCTGAACATGACAAACTCCATGGTCCACCTCTGGAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GAGCTCTTTGCTACCCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAGCTGTCTTGCGGAGTTaGTATATGAACTCGCCCACT +
Preference number: 5 (lower is better)
Translates to: ELFATRFSLSLSLSLSHTAVLRS*YMNSPT
Trigger: AGTGGGCGAGTTCATATACAAACTCCGCAAGACAGC...TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGGGTAGCAAAGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGCGCAAGCCACTGGTTTaGTTGAACACAATCCGTCCA +
Preference number: 5 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVRKPLV*LNTIRP
Trigger: TGGACGGATTGTGTTCAACAAAACCAGTGGCTTGCG...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp CTGCAGTGTCATGCACAAAAGCACATGTGTGATATGAACATGGAGGTGGGTGTGAGGGTCCTATCAGACTaGCGGAACATGACAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LQCHAQKHMCDMNMEVGVRVLSD*RNMTKG
Trigger: GCCTTTTGTCATGTTCCGCAAGTCTGATAGGACCCT...CACACCCACCTCCATGTTCATATCACACATGTGCTTTTGTGCATGACACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp GAATGGCCTTGTGTCTCTGTGTTGGGTCTTTGGTTAATCTTCCAGGAGGCAGCTACAGCCAGATCTGCTTaGTGGTCAATGAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: EWPCVSVLGLWLIFQEAATARSA*WSMSSL
Trigger: CAAGGAACTCATTGACCACAAAGCAGATCTGGCTGT...AGCTGCCTCCTGGAAGATTAACCAAAGACCCAACACAGAGACACAAGGCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS-3UTR CAA 90 bp AGTACTGATGCTGGCAAGGTCTGGCTTGATCCAGAGGGCTGTGTAAACCTGACCTCAAAGGTGGAGATCTaGGATTTCTTGAAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: STDAGKVWLDPEGCVNLTSKVEI*DFLKKV
Trigger: GACCTTCTTCAAGAAATCCAAGATCTCCACCTTTGA...GGTCAGGTTTACACAGCCCTCTGGATCAAGCCAGACCTTGCCAGCATCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp CCATCCAGCAGGCCTGACTCTGCCCGGGGAGCTGCCTaGAGTCGCTCCATGGCCCACTTCTCCACAATGGCT +
Preference number: 6 (lower is better)
Translates to: PSSRPDSARGAA*SRSMAHFSTMA
Trigger: AGCCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAGGCAGCTCCCCGGGCAGAGTCAGGCCTGCTGGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp GGCAGCATCCGTCATCATCACACCATCCAGCAGGCCTaGCTCTGCCCGGGGAGCTGCCTGCAGTCGCTCCAT +
Preference number: 6 (lower is better)
Translates to: GSIRHHHTIQQA*LCPGSCLQSLH
Trigger: ATGGAGCGACTGCAGGCAGCTCCCCGGGCAGAGTCAGGCCTGCTGGATGGTGTGATGATGACGGATGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp CATCATAGGAGGCTGGGGCTTGTGCTTGAGACGCCGTaGGCAGGTGAGGGAGAAGCGGATCTCGTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: HHRRLGLVLETP*AGEGEADLVGH
Trigger: GTGGCCGACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp CGTCTTGACCATCATAGGAGGCTGGGGCTTGTGCTTGAGACGCCGTaGGCAGGTGAGGGAGAAGCGGATCTCGTCGGCCACTGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RLDHHRRLGLVLETP*AGEGEADLVGHCAA
Trigger: TGCAGCACAGTGGCCGACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp CGTTCCACTGGCCTTTGTCATCCTGGGCCCCGTACTTaGCGTCTTCCACCAGCCGGATCTCGTAGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RSTGLCHPGPRT*RLPPAGSRRRS
Trigger: GCTTCTCCTACGAGATCCGGCTGGTGGAAGACGGCAAGTACGGGGCCCAGGATGACAAAGGCCAGTGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp CGGATCTCGTCGGCCACTGTGCTGCAGAAGGAGCGCTaGTCCCGCTCCGCTGTCTTGCGGAGTTTGTATATG +
Preference number: 6 (lower is better)
Translates to: RISSATVLQKER*SRSAVLRSLYM
Trigger: CATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGCGCTCCTTCTGCAGCACAGTGGCCGACGAGATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp GCATCCGTCTTGACCATCATAGGAGGCTGGGGCTTGTaGTTGAGACGCCGTTGGCAGGTGAGGGAGAAGCGG +
Preference number: 6 (lower is better)
Translates to: ASVLTIIGGWGL*LRRRWQVREKR
Trigger: CCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp TCCGCATACTCAAAGATTCCTCCGATCCGGATGACGTaGGGCATCCCGCGCGAGTCTGGGATCCAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: SAYSKIPPIRMT*GIPRESGIQKA
Trigger: CGCCTTCTGGATCCCAGACTCGCGCGGGATGCCCCACGTCATCCGGATCGGAGGAATCTTTGAGTATGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp TCCTTGACCATGCCGTTCCACTGGCCTTTGTCATCCTaGGCCCCGTACTTGCCGTCTTCCACCAGCCGGATC +
Preference number: 6 (lower is better)
Translates to: SLTMPFHWPLSS*APYLPSSTSRI
Trigger: GATCCGGCTGGTGGAAGACGGCAAGTACGGGGCCCAGGATGACAAAGGCCAGTGGAACGGCATGGTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp GTGCTGCAGAAGGAGCGCTGCTCCCGCTCCGCTGTCTaGCGGAGTTTGTATATGAACTCGCCCACTGCCACC +
Preference number: 6 (lower is better)
Translates to: VLQKERCSRSAV*RSLYMNSPTAT
Trigger: GGTGGCAGTGGGCGAGTTCATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGCGCTCCTTCTGCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp CTGCAGTCGAAGATGATCCGGAACTCCCTGCCCCGCTTCATCTCTTaGAGCAAGGGGCGGGAGTCATCCGAGTCAATCGGGAGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: LQSKMIRNSLPRFIS*SKGRESSESIGSWR
Trigger: TCGCCAGCTCCCGATTGACTCGGATGACTCCCGCCCCTTGCTCAAAGAGATGAAGCGGGGCAGGGAGTTCCGGATCATCTTCGACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp ATAACCGCATCCGTCTTGACCATCATAGGAGGCTGGGGCTTGTGCTaGAGACGCCGTTGGCAGGTGAGGGAGAAGCGGATCTCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: ITASVLTIIGGWGLC*RRRWQVREKRISSA
Trigger: GGCCGACGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGATGCGGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp GACCATCCGCATACTCAAAGATTCCTCCGATCCGGATaGCGTGGGGCATCCCGCGCGAGTCTGGGATCCAGA +
Preference number: 6 (lower is better)
Translates to: DHPHTQRFLRSG*RGASRASLGSR
Trigger: TCTGGATCCCAGACTCGCGCGGGATGCCCCACGTCATCCGGATCGGAGGAATCTTTGAGTATGCGGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp GCTGCTCCCGCTCCGCTGTCTTGCGGAGTTTGTATATaGACTCGCCCACTGCCACCAACACGGACAGGACCA +
Preference number: 6 (lower is better)
Translates to: AAPAPLSCGVCI*TRPLPPTRTGP
Trigger: TGGTCCTGTCCGTGTTGGTGGCAGTGGGCGAGTTCATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp CATGCCCATGGCCATGGCCTGCTTGAGGATCTGGGCTaGCATGGTGTGGCTGCAGTCGAAGATGATCCGGAA +
Preference number: 6 (lower is better)
Translates to: HAHGHGLLEDLG*HGVAAVEDDPE
Trigger: TTCCGGATCATCTTCGACTGCAGCCACACCATGGCAGCCCAGATCCTCAAGCAGGCCATGGCCATGGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp GCCCCGTCCTTGACAGCACCGTACTCTATTTTGGTCTaGTTGGCCAGGTCATCAGCGGAGTCGATGGGCGAC +
Preference number: 6 (lower is better)
Translates to: APSLTAPYSILV*LARSSAESMGD
Trigger: GTCGCCCATCGACTCCGCTGATGACCTGGCCAAGCAGACCAAAATAGAGTACGGTGCTGTCAAGGACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp CAGCATTGGTGCAGGAGCCCTGCGATGGCCCAAAGATaGCTACAACACCCAGTGCCAACTGGTCACAGGCCT +
Preference number: 6 (lower is better)
Translates to: QHWCRSPAMAQR*LQHPVPTGHRP
Trigger: AGGCCTGTGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp AAGGAGCGCTGCTCCCGCTCCGCTGTCTTGCGGAGTTaGTATATGAACTCGCCCACTGCCACCAACACGGAC +
Preference number: 6 (lower is better)
Translates to: KERCSRSAVLRS*YMNSPTATNTD
Trigger: GTCCGTGTTGGTGGCAGTGGGCGAGTTCATATACAAACTCCGCAAGACAGCGGAGCGGGAGCAGCGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp TCCGTCTTGACCATCATAGGAGGCTGGGGCTTGTGCTaGAGACGCCGTTGGCAGGTGAGGGAGAAGCGGATC +
Preference number: 6 (lower is better)
Translates to: SVLTIIGGWGLC*RRRWQVREKRI
Trigger: GATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp GCCCTGCGATGGCCCAAAGATGGCTACAACACCCAGTaGCAACTGGTCACAGGCCTTCTTGGTGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: ALRWPKDGYNTQ*QLVTGLLGGLK
Trigger: TTTGAGGCCACCAAGAAGGCCTGTGACCAGTTGGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp TCCAGCGCAGTTGGATGTGGGGAACCTCCAAGGCGTTaGAAATGGACTGGACAGCATTGGTGCAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: SSAVGCGEPPRR*KWTGQHWCRSP
Trigger: AGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGCCTTGGAGGTTCCCCACATCCAACTGCGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp AGCAAGGGGCGGGAGTCATCCGAGTCAATCGGGAGCTaGCGAATCTTCAGGCGAATGTTGTACCTCGAAGGG +
Preference number: 6 (lower is better)
Translates to: SKGRESSESIGS*RIFRRMLYLEG
Trigger: CCCTTCGAGGTACAACATTCGCCTGAAGATTCGCCAGCTCCCGATTGACTCGGATGACTCCCGCCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp AAGATGATCCGGAACTCCCTGCCCCGCTTCATCTCTTaGAGCAAGGGGCGGGAGTCATCCGAGTCAATCGGG +
Preference number: 6 (lower is better)
Translates to: KMIRNSLPRFIS*SKGRESSESIG
Trigger: CCCGATTGACTCGGATGACTCCCGCCCCTTGCTCAAAGAGATGAAGCGGGGCAGGGAGTTCCGGATCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp ACAGGGGCTAGCGAGGTGCTGCAGCTCATGCTGTCCTaGCCTGGCAGCCTTCGGTCATTAAAGGTGTGCATG +
Preference number: 6 (lower is better)
Translates to: TGASEVLQLMLS*PGSLRSLKVCM
Trigger: CATGCACACCTTTAATGACCGAAGGCTGCCAGGCAAGGACAGCATGAGCTGCAGCACCTCGCTAGCCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp AGTCGCTCCATGGCCCACTTCTCCACAATGGCTGAGACATGGGGATaGTCCACGTTGAGTATGCGGAACCCAGTCAGGTTCACTCCCGAG +
Preference number: 6 (lower is better)
Translates to: SRSMAHFSTMAETWG*STLSMRNPVRFTPE
Trigger: CTCGGGAGTGAACCTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp ATGTTGATAACCGCATCCGTCTTGACCATCATAGGAGGCTGGGGCTaGTGCTTGAGACGCCGTTGGCAGGTGAGGGAGAAGCGGATCTCG +
Preference number: 6 (lower is better)
Translates to: MLITASVLTIIGGWG*CLRRRWQVREKRIS
Trigger: CGAGATCCGCTTCTCCCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGATGCGGTTATCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp TTGCAAATGGACTGGACAGCATTGGTGCAGGAGCCCTaGGATGGCCCAAAGATGGCTACAACACCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LQMDWTALVQEP*DGPKMATTPSA
Trigger: GGCACTGGGTGTTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp CCTCCAAGGCGTTGCAAATGGACTGGACAGCATTGGTaGAGGAGCCCTGCGATGGCCCAAAGATGGCTACAA +
Preference number: 6 (lower is better)
Translates to: PPRRCKWTGQHW*RSPAMAQRWLQ
Trigger: TTGTAGCCATCTTTGGGCCATCGCAGGGCTCCTGCACCAATGCTGTCCAGTCCATTTGCAACGCCTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp CGCTCCATGGCCCACTTCTCCACAATGGCTGAGACATaGGGATTGTCCACGTTGAGTATGCGGAACCCAGTC +
Preference number: 6 (lower is better)
Translates to: RSMAHFSTMAET*GLSTLSMRNPV
Trigger: GACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp TTGATAACCGCATCCGTCTTGACCATCATAGGAGGCTaGGGCTTGTGCTTGAGACGCCGTTGGCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LITASVLTIIGG*GLCLRRRWQVR
Trigger: CCTCACCTGCCAACGGCGTCTCAAGCACAAGCCCCAGCCTCCTATGATGGTCAAGACGGATGCGGTTATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp CTGCAGTCGCTCCATGGCCCACTTCTCCACAATGGCTaGGACATGGGGATTGTCCACGTTGAGTATGCGGAA +
Preference number: 6 (lower is better)
Translates to: LQSLHGPLLHNG*DMGIVHVEYAE
Trigger: TTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCATGGAGCGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp CGAAAGGCGTGCTCTTCAGCGTTCATGACCTGGGCGTaGGGACCATCCGCATACTCAAAGATTCCTCCGATC +
Preference number: 6 (lower is better)
Translates to: RKACSSAFMTWA*GPSAYSKIPPI
Trigger: GATCGGAGGAATCTTTGAGTATGCGGATGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGCACGCCTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp GGCTCCTCCAGCACAGTGGTGACGATGAGTGACCTATaGGTCAGAGAGTCAGTGACATTAGGACCTCGGCCT +
Preference number: 6 (lower is better)
Translates to: GSSSTVVTMSDL*VRESVTLGPRP
Trigger: AGGCCGAGGTCCTAATGTCACTGACTCTCTGACCAATAGGTCACTCATCGTCACCACTGTGCTGGAGGAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp GCAGAAAATCGAAAGGCGTGCTCTTCAGCGTTCATGACCTGGGCGTaGGGACCATCCGCATACTCAAAGATTCCTCCGATCCGGATGACG +
Preference number: 6 (lower is better)
Translates to: AENRKACSSAFMTWA*GPSAYSKIPPIRMT
Trigger: CGTCATCCGGATCGGAGGAATCTTTGAGTATGCGGATGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGCACGCCTTTCGATTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp GAGTCATCCGAGTCAATCGGGAGCTGGCGAATCTTCAGGCGAATGTaGTACCTCGAAGGGGCCATGATGAGTTCCTGCAGACGGATGAGA +
Preference number: 6 (lower is better)
Translates to: ESSESIGSWRIFRRM*YLEGAMMSSCRRMR
Trigger: TCTCATCCGTCTGCAGGAACTCATCATGGCCCCTTCGAGGTACAACATTCGCCTGAAGATTCGCCAGCTCCCGATTGACTCGGATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp TCTCCACAATGGCTGAGACATGGGGATTGTCCACGTTaGGTATGCGGAACCCAGTCAGGTTCACTCCCGAGT +
Preference number: 6 (lower is better)
Translates to: SPQWLRHGDCPR*VCGTQSGSLPS
Trigger: ACTCGGGAGTGAACCTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp GCTGTTGAGCAGTGTGAAGTTATTCTCCACCACCTCTaGGCCGGGGTTGCAGGGATGAGCATCATACCACTC +
Preference number: 6 (lower is better)
Translates to: AVEQCEVILHHL*AGVAGMSIIPL
Trigger: GAGTGGTATGATGCTCATCCCTGCAACCCCGGCTCAGAGGTGGTGGAGAATAACTTCACACTGCTCAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp ATGGCCCACTTCTCCACAATGGCTGAGACATGGGGATaGTCCACGTTGAGTATGCGGAACCCAGTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: MAHFSTMAETWG*STLSMRNPVRF
Trigger: GAACCTGACTGGGTTCCGCATACTCAACGTGGACAATCCCCATGTCTCAGCCATTGTGGAGAAGTGGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp GCCACAGCCAGATCTGCTTTGTGGTCAATGAGTTCCTaGACCATGCCGTTCCACTGGCCTTTGTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: ATARSALWSMSS*TMPFHWPLSSW
Trigger: CCAGGATGACAAAGGCCAGTGGAACGGCATGGTCAAGGAACTCATTGACCACAAAGCAGATCTGGCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp GAGTCAGTGACATTAGGACCTCGGCCTTTGGCAACCTCAGTGATATaGAGACCGTCAGCTGGACTCCATACTCCAACCTTCTCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: ESVTLGPRPLATSVI*RPSAGLHTPTFSRP
Trigger: TGGCCTCGAGAAGGTTGGAGTATGGAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGCCGAGGTCCTAATGTCACTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS TCA 72 bp TGGCAGAAAATCGAAAGGCGTGCTCTTCAGCGTTCATaGCCTGGGCGTTGGGACCATCCGCATACTCAAAGA +
Preference number: 6 (lower is better)
Translates to: WQKIERRALQRS*PGRWDHPHTQR
Trigger: TCTTTGAGTATGCGGATGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGCACGCCTTTCGATTTTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp GCCTTTGGCAACCTCAGTGATATTGAGACCGTCAGCTaGACTCCATACTCCAACCTTCTCGAGGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: AFGNLSDIETVS*TPYSNLLEAIF
Trigger: GAAGATGGCCTCGAGAAGGTTGGAGTATGGAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp ATGACAAAAGGCTCCTCCAGCACAGTGGTGACGATGAGTGACCTATaGGTCAGAGAGTCAGTGACATTAGGACCTCGGCCTTTGGCAACC +
Preference number: 6 (lower is better)
Translates to: MTKGSSSTVVTMSDL*VRESVTLGPRPLAT
Trigger: GGTTGCCAAAGGCCGAGGTCCTAATGTCACTGACTCTCTGACCAATAGGTCACTCATCGTCACCACTGTGCTGGAGGAGCCTTTTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CCA 72 bp CAACACCCAGTGCCAACTGGTCACAGGCCTTCTTGGTaGCCTCAAAACTGTCATGGAAGTGAATCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: QHPVPTGHRPSW*PQNCHGSESSE
Trigger: TTCAGAGGATTCACTTCCATGACAGTTTTGAGGCCACCAAGAAGGCCTGTGACCAGTTGGCACTGGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp ACATTAGGACCTCGGCCTTTGGCAACCTCAGTGATATaGAGACCGTCAGCTGGACTCCATACTCCAACCTTC +
Preference number: 6 (lower is better)
Translates to: TLGPRPLATSVI*RPSAGLHTPTF
Trigger: GAAGGTTGGAGTATGGAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGCCGAGGTCCTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp TTGGTCAGAGAGTCAGTGACATTAGGACCTCGGCCTTaGGCAACCTCAGTGATATTGAGACCGTCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: LVRESVTLGPRP*ATSVILRPSAG
Trigger: TCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGCCGAGGTCCTAATGTCACTGACTCTCTGACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 72 bp TTGCCTGGCAGCCTTCGGTCATTAAAGGTGTGCATGTaGATAACCGCATCCGTCTTGACCATCATAGGAGGC +
Preference number: 6 (lower is better)
Translates to: LPGSLRSLKVCM*ITASVLTIIGG
Trigger: GCCTCCTATGATGGTCAAGACGGATGCGGTTATCAACATGCACACCTTTAATGACCGAAGGCTGCCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS CAA 90 bp AGTGACCTATTGGTCAGAGAGTCAGTGACATTAGGACCTCGGCCTTaGGCAACCTCAGTGATATTGAGACCGTCAGCTGGACTCCATACT +
Preference number: 6 (lower is better)
Translates to: SDLLVRESVTLGPRP*ATSVILRPSAGLHT
Trigger: AGTATGGAGTCCAGCTGACGGTCTCAATATCACTGAGGTTGCCAAAGGCCGAGGTCCTAATGTCACTGACTCTCTGACCAATAGGTCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8
CDS GCA 72 bp TTTCTGTTGATGATGTTGGCAGAAAATCGAAAGGCGTaGTCTTCAGCGTTCATGACCTGGGCGTTGGGACCA +
Preference number: 6 (lower is better)
Translates to: FLLMMLAENRKA*SSAFMTWALGP
Trigger: TGGTCCCAACGCCCAGGTCATGAACGCTGAAGAGCACGCCTTTCGATTTTCTGCCAACATCATCAACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030676.8