RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRID2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071424

Ensembl transcript IDs: ENSMUST00000095852.5, ENSMUST00000210324.2

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTTTGCAGGTCAGGTGGCTTAGAACCGATGCTTCAGCAACCCCGTaGTGGGTCACTACTCAGAAGGGCTCTGAGGGATCAGGATGTCTG +
Preference number: 1 (lower is better)
Translates to: CLQVRWLRTDASATP*WVTTQKGSEGSGCL
Trigger: CAGACATCCTGATCCCTCAGAGCCCTTCTGAGTAGTGACCCAGCACGGGGTTGCTGAAGCATCGGTTCTAAGCCACCTGACCTGCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp CTCTTTGCTGGGTCCTTTGGCCCAATGCCTTTGACCTTGGGTGGCTaGTGCTTTGAGTCTGCCTGGCTTTCTTCCCAAAGCAAGTGGCGA +
Preference number: 1 (lower is better)
Translates to: LFAGSFGPMPLTLGG*CFESAWLSSQSKWR
Trigger: TCGCCACTTGCTTTGGGAAGAAAGCCAGGCAGACTCAAAGCAGCAGCCACCCAAGGTCAAAGGCATTGGGCCAAAGGACCCAGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp TTGCAGGTCAGGTGGCTTAGAACCGATGCTTCAGCAACCCCGTGCTaGGTCACTACTCAGAAGGGCTCTGAGGGATCAGGATGTCTGCAT +
Preference number: 1 (lower is better)
Translates to: LQVRWLRTDASATPC*VTTQKGSEGSGCLH
Trigger: ATGCAGACATCCTGATCCCTCAGAGCCCTTCTGAGTAGTGACCCAGCACGGGGTTGCTGAAGCATCGGTTCTAAGCCACCTGACCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp TCCTCTAGGAGTCATACTGGGCTCGCTGGGGTCAAGAAGCAGAAATaGAGTTCTCATGGCTGTCAACTCACTGAGATAGACTCACTGGAC +
Preference number: 1 (lower is better)
Translates to: SSRSHTGLAGVKKQK*SSHGCQLTEIDSLD
Trigger: GTCCAGTGAGTCTATCTCAGTGAGTTGACAGCCATGAGAACTGCATTTCTGCTTCTTGACCCCAGCGAGCCCAGTATGACTCCTAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp GCCCTGACCTGTAGAATGTCTTGTTTCATAAGCATGGGCTGCCATTaGAATGACAGCTTTCCCTCCTGGCTTAGGTCTGCTCTTTGCTGG +
Preference number: 1 (lower is better)
Translates to: ALTCRMSCFISMGCH*NDSFPSWLRSALCW
Trigger: CCAGCAAAGAGCAGACCTAAGCCAGGAGGGAAAGCTGTCATTGCAATGGCAGCCCATGCTTATGAAACAAGACATTCTACAGGTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp CAGCTGGCCCTGACCTGTAGAATGTCTTGTTTCATAAGCATGGGCTaGCATTGCAATGACAGCTTTCCCTCCTGGCTTAGGTCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: QLALTCRMSCFISMG*HCNDSFPSWLRSAL
Trigger: AAGAGCAGACCTAAGCCAGGAGGGAAAGCTGTCATTGCAATGGCAGCCCATGCTTATGAAACAAGACATTCTACAGGTCAGGGCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp GATTCAAACTTGCACCTCAGTGTGAGTACGCTTGACCAGGGCACGTaGGTGAACAGTCCACATACAGTCCAAGATGAACAGGGATCATCG +
Preference number: 1 (lower is better)
Translates to: DSNLHLSVSTLDQGT*VNSPHTVQDEQGSS
Trigger: CGATGATCCCTGTTCATCTTGGACTGTATGTGGACTGTTCACCCACGTGCCCTGGTCAAGCGTACTCACACTGAGGTGCAAGTTTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp ATGTGTGTTCATGTGCCTTTGCCTCCGTGTATACATGTGTCTTTGTaGGTGATACACAGGCTTGGCTCTGCTGCTCTTAAGGTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: MCVHVPLPPCIHVSL*VIHRLGSAALKVKN
Trigger: GTTCTTCACCTTAAGAGCAGCAGAGCCAAGCCTGTGTATCACCCACAAAGACACATGTATACACGGAGGCAAAGGCACATGAACACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp GGGTTCTATTTTTCTCTGGTTAACTTTGCCAAGGCACATTCTCCTTaGTCCTTCACATCTCCCTGTATTCTGTCCACCAGTAGACTGAGG +
Preference number: 1 (lower is better)
Translates to: GFYFSLVNFAKAHSP*SFTSPCILSTSRLR
Trigger: CCTCAGTCTACTGGTGGACAGAATACAGGGAGATGTGAAGGACCAAGGAGAATGTGCCTTGGCAAAGTTAACCAGAGAAAAATAGAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp AAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTTaGTGGAAGGGCGATACACACAGGCGCCACAACCTTAAGGTGAAG +
Preference number: 1 (lower is better)
Translates to: KRLFTWNRPWKTQLS*WKGDTHRRHNLKVK
Trigger: CTTCACCTTAAGGTTGTGGCGCCTGTGTGTATCGCCCTTCCACCAAGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp AGCTACTGCAGGAATGTTTTCAACTTGGTTGCAGAGAGGGCAAAGTaGTCTATGATGAGACATGTAACTTGTTTGCAGGTCAGGTGGCTT +
Preference number: 1 (lower is better)
Translates to: SYCRNVFNLVAERAK*SMMRHVTCLQVRWL
Trigger: AAGCCACCTGACCTGCAAACAAGTTACATGTCTCATCATAGAGCACTTTGCCCTCTCTGCAACCAAGTTGAAAACATTCCTGCAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp TCCAGAAGGAGTGACCTTAAACCTGATCTTTGCACCATTCTACTGTaGAAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTGTATCT +
Preference number: 1 (lower is better)
Translates to: SRRSDLKPDLCTILL*KVKAALVTNAGIVS
Trigger: AGATACAATACCAGCATTTGTCACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAGGTCACTCCTTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp GAGAGGCTCATGGACTTTGAGAGGAATCCTTTGGTGTATAGTGGTTaGGTATCAGTGGCTTCACCAGACTGTGATTTCTACGTGAATTTC +
Preference number: 1 (lower is better)
Translates to: ERLMDFERNPLVYSG*VSVASPDCDFYVNF
Trigger: GAAATTCACGTAGAAATCACAGTCTGGTGAAGCCACTGATACCCAACCACTATACACCAAAGGATTCCTCTCAAAGTCCATGAGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 90 bp TGCTACTCTTCAATGGGGGCAAGTGTAACACGTGTTACAGCCTGGTaGAGACAGCTTCTTGAATGGAAGAAGGACTTTAAATTCAGGAGA +
Preference number: 1 (lower is better)
Translates to: CYSSMGASVTRVTAW*RQLLEWKKDFKFRR
Trigger: TCTCCTGAATTTAAAGTCCTTCTTCCATTCAAGAAGCTGTCTTCACCAGGCTGTAACACGTGTTACACTTGCCCCCATTGAAGAGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp CTTCAGAATTTCATTGGTAAGAGATTGTTCACATGGAATAGACCTTaGAAAACTCAGTTGTCTTGGTGGAAGGGCGATACACACAGGCGC +
Preference number: 1 (lower is better)
Translates to: LQNFIGKRLFTWNRP*KTQLSWWKGDTHRR
Trigger: GCGCCTGTGTGTATCGCCCTTCCACCAAGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAAATTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp TGTTCTAAACTTTGGAGAGGCTCATGGACTTTGAGAGGAATCCTTTaGTGTATAGTGGTTGGGTATCAGTGGCTTCACCAGACTGTGATT +
Preference number: 1 (lower is better)
Translates to: CSKLWRGSWTLRGIL*CIVVGYQWLHQTVI
Trigger: AATCACAGTCTGGTGAAGCCACTGATACCCAACCACTATACACCAAAGGATTCCTCTCAAAGTCCATGAGCCTCTCCAAAGTTTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 90 bp CAGCTAAAGGACACTCGACAGCAGTGGAGATTTTGTGGATACAGCTaGAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAA +
Preference number: 1 (lower is better)
Translates to: QLKDTRQQWRFCGYS*RWRKTEVIAIRVSK
Trigger: TTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGCTGTATCCACAAAATCTCCACTGCTGTCGAGTGTCCTTTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR TCA 90 bp TTTACTTTACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTaGAACCAGATATCCAGAAGGAGTGACCTTAAACCTGATCTTTGC +
Preference number: 1 (lower is better)
Translates to: FTLPLTFWKALAFPC*NQISRRSDLKPDLC
Trigger: GCAAAGATCAGGTTTAAGGTCACTCCTTCTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGTAAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 90 bp ATAGCATTACCCAAATATGATAACATGTCTTCTGACTTCACAGTCTaGTTTTCGCCTGTAAGCTACTGCAGGAATGTTTTCAACTTGGTT +
Preference number: 1 (lower is better)
Translates to: IALPKYDNMSSDFTV*FSPVSYCRNVFNLV
Trigger: AACCAAGTTGAAAACATTCCTGCAGTAGCTTACAGGCGAAAATCAGACTGTGAAGTCAGAAGACATGTTATCATATTTGGGTAATGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 90 bp CTTTACGAAGGCCGAGTTCACAAGGGTTTTGTATGTTTCATAAACTaGTTCAGAATTTCATTGGTAAGAGATTGTTCACATGGAATAGAC +
Preference number: 1 (lower is better)
Translates to: LYEGRVHKGFVCFIN*FRISLVRDCSHGID
Trigger: GTCTATTCCATGTGAACAATCTCTTACCAATGAAATTCTGAAGCAGTTTATGAAACATACAAAACCCTTGTGAACTCGGCCTTCGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 90 bp GTTGTATTGGCCCAAGATGATGTTGATAGAAAAGTAAGCTATTCTTaGGAAATATGGTACTATGTTCTAAACTTTGGAGAGGCTCATGGA +
Preference number: 1 (lower is better)
Translates to: VVLAQDDVDRKVSYS*EIWYYVLNFGEAHG
Trigger: TCCATGAGCCTCTCCAAAGTTTAGAACATAGTACCATATTTCCCAAGAATAGCTTACTTTTCTATCAACATCATCTTGGGCCAATACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 90 bp TTATCTACCTCCTCATTGGAATTTAAACTTCTTAGGGCAAGAACATaGCTAAATCATTGTATTCCCAGAATTCAGTGCAGTGCTAGATCT +
Preference number: 1 (lower is better)
Translates to: LSTSSLEFKLLRART*LNHCIPRIQCSARS
Trigger: AGATCTAGCACTGCACTGAATTCTGGGAATACAATGATTTAGTCATGTTCTTGCCCTAAGAAGTTTAAATTCCAATGAGGAGGTAGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACGAAGGGGGTGGGCACTaGTGCAGTGCGAAGGGGATT +
Preference number: 2 (lower is better)
Translates to: QPASPTERASCAALAPVHEGGGH*CSAKGI
Trigger: AATCCCCTTCGCACTGCAGCAGTGCCCACCCCCTTC...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR GCA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACTGGGCACTGCTGCAGTaGGAAGGGGATTTTAACTGT +
Preference number: 2 (lower is better)
Translates to: QPASPTERASCAALAPVHWALLQ*EGDFNC
Trigger: ACAGTTAAAATCCCCTTCGCACTGCAGCAGTGCCCA...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGTGCAGGGGTTGCCTTTaGTCCACAGCTAAAGGACAC +
Preference number: 2 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWCRGCL*STAKGH
Trigger: GTGTCCTTTAGCTGTGGACCAAAGGCAACCCCTGCA...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CCA 90 bp CCGTGTATACATGTGTCTTTGTGGGTGATACACAGGCTTGGCTCTGCTGCTCTTTCGTTCCCAGACAAGTaGGCTGCCCCAGGCAAGATT +
Preference number: 2 (lower is better)
Translates to: PCIHVSLWVIHRLGSAALSFPDK*AAPGKI
Trigger: AATCTTGCCTGGGGCAGCCCACTTGTCTGGGAACGA...AAGAGCAGCAGAGCCAAGCCTGTGTATCACCCACAAAGACACATGTATACACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp CCGTGTATACATGTGTCTTTGTGGGTGATACACAGGCTTGGCTCTGCTGCTCTTCTTGACCAGGGCACGTaGGTGAACAGTCCACATACA +
Preference number: 2 (lower is better)
Translates to: PCIHVSLWVIHRLGSAALLDQGT*VNSPHT
Trigger: TGTATGTGGACTGTTCACCCACGTGCCCTGGTCAAG...AAGAGCAGCAGAGCCAAGCCTGTGTATCACCCACAAAGACACATGTATACACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCTACTCAGAAGGGCTCTaGGGGATCAGGATGTCTGCA +
Preference number: 2 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCYSEGL*GIRMSA
Trigger: TGCAGACATCCTGATCCCTCAGAGCCCTTCTGAGTA...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp GTATCCCCCTTACACCAAGACAGGTTGTGGCTGTGTGTGTGTGTTCATTCATGTTGCACCATTCTACTGTaGAAGGTGAAGGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: VSPLHQDRLWLCVCVHSCCTILL*KVKAAL
Trigger: AAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCA...ACATGAATGAACACACACACACAGCCACAACCTGTCTTGGTGTAAGGGGGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCGACAGCTTTCCCTCCTaGCTTAGGTCTGCTCTTTGC +
Preference number: 2 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCDSFPS*LRSALC
Trigger: GCAAAGAGCAGACCTAAGCCAGGAGGGAAAGCTGTC...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCCGTGTTACAGCCTGGTaGAGACAGCTTCTTGAATGG +
Preference number: 2 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCRVTAW*RQLLEW
Trigger: CCATTCAAGAAGCTGTCTTCACCAGGCTGTAACACG...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp CTTAAACCTGATCTTTGCACCATTCTACTGTGGAAGGTGAAGGCTGCCCTTGTGACGGTGATGAAAAGCTaGCAGCTAGCAAGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: LKPDLCTILLWKVKAALVTVMKS*QLARSF
Trigger: AAAGGACCTTGCTAGCTGTCAGCTTTTCATCACCGT...CACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp CTGAAAACACAGGATAAATTCTTGCTTCCTACTTACCACATCGAGTTTAAGGATGCCACATCGACACTTTaGAGGGGCTTCCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LKTQDKFLLPTYHIEFKDATSTL*RGFPSS
Trigger: GGAGGAGGGGAAGCCCCTTCAAAGTGTCGATGTGGC...ATCCTTAAACTCGATGTGGTAAGTAGGAAGCAAGAATTTATCCTGTGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR GCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGCAGAGGAACGGTGGGTaGATGGGAGCCCTATATGCA +
Preference number: 2 (lower is better)
Translates to: KNCILILRGLNGLQIISQQRNGG*MGALYA
Trigger: TGCATATAGGGCTCCCATGCACCCACCGTTCCTCTG...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR GCA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGACTGGTTTTTGTTCATaGCCCCTGCTGACACACTTG +
Preference number: 2 (lower is better)
Translates to: SHRQDPLAILATERMRLKTGFCS*PLLTHL
Trigger: CAAGTGTGTCAGCAGGGGGCATGAACAAAAACCAGT...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CCA 90 bp GTATCCCCCTTACACCAAGACAGGTTGTGGCTGTGTGTGTGTGTTCATTCATGTTCCCTTACTTTATTTTaGGTGGCCTGTGCTCCACTA +
Preference number: 2 (lower is better)
Translates to: VSPLHQDRLWLCVCVHSCSLTLF*VACAPL
Trigger: TAGTGGAGCACAGGCCACCCAAAATAAAGTAAGGGA...ACATGAATGAACACACACACACAGCCACAACCTGTCTTGGTGTAAGGGGGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp CCGTGTATACATGTGTCTTTGTGGGTGATACACAGGCTTGGCTCTGCTGCTCTTGTGTGTACATGTGCATaGATGCTGTTCTTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PCIHVSLWVIHRLGSAALVCTCA*MLFFLH
Trigger: GTGAAGAAAGAACAGCATCCATGCACATGTACACAC...AAGAGCAGCAGAGCCAAGCCTGTGTATCACCCACAAAGACACATGTATACACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CAA 90 bp ATTGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTaGTCTTGGTGGAAGGGCGATACACACAGGCGCCACAACCTTAAG +
Preference number: 2 (lower is better)
Translates to: IGKRLFTWNRPWKTQ*SWWKGDTHRRHNLK
Trigger: CTTAAGGTTGTGGCGCCTGTGTGTATCGCCCTTCCACCAAGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp CTTAAACCTGATCTTTGCACCATTCTACTGTGGAAGGTGAAGGCTGCCCTTGTGAGGGATCAGGATGTCTaGATGCTGGCTTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: LKPDLCTILLWKVKAALVRDQDV*MLAFNF
Trigger: AAAATTGAAAGCCAGCATGCAGACATCCTGATCCCT...CACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp CTTAAACCTGATCTTTGCACCATTCTACTGTGGAAGGTGAAGGCTGCCCTTGTGTCGCCTGTAAGCTACTaGAGGAATGTTTTCAACTTG +
Preference number: 2 (lower is better)
Translates to: LKPDLCTILLWKVKAALVSPVSY*RNVFNL
Trigger: CAAGTTGAAAACATTCCTGCAGTAGCTTACAGGCGA...CACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATTTGACCTTGGGTGGCTaGTGCTTTGAGTCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNLTLGG*CFESAW
Trigger: CCAGGCAGACTCAAAGCAGCAGCCACCCAAGGTCAA...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp GGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTTGGTGGCAGCTCACCAGTGCCTaGTACTCAGGATCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: GKRLFTWNRPWKTQLSWWQLTSA*YSGSKK
Trigger: CTTCTTTGATCCTGAGTACCAGGCACTGGTGAGCTG...CCACCAAGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp TGCACCATTCTACTGTGGAAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTATAGACTCACTGGACTaGTTTATCTACCTCCTCATT +
Preference number: 2 (lower is better)
Translates to: CTILLWKVKAALVTNAGIIDSLD*FIYLLI
Trigger: AATGAGGAGGTAGATAAATCAGTCCAGTGAGTCTAT...AATACCAGCATTTGTCACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTCATTTCACAGACACTaGAGGGGTTGCCTTTGGTCC +
Preference number: 2 (lower is better)
Translates to: NPSHRTNEIKVSILLPENSFHRH*RGCLWS
Trigger: GGACCAAAGGCAACCCCTGCAGTGTCTGTGAAATGA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR GCA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCAGCTCCTGTACACAATaGTTGGTTTTTAAACTAAAG +
Preference number: 2 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRASSCTQ*LVFKLK
Trigger: CTTTAGTTTAAAAACCAAGCATTGTGTACAGGAGCT...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR GCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCGTCAAGAAGCAGAAATaGAGTTCTCATGGCTGTCAA +
Preference number: 2 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCVKKQK*SSHGCQ
Trigger: TTGACAGCCATGAGAACTGCATTTCTGCTTCTTGAC...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp AAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTGTATCTGATAGTAAGGATAAGGCACATTCTCCTTaGTCCTTCACATCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: KVKAALVTNAGIVSDSKDKAHSP*SFTSPC
Trigger: ACAGGGAGATGTGAAGGACCAAGGAGAATGTGCCTT...ATCCTTACTATCAGATACAATACCAGCATTTGTCACAAGGGCAGCCTTCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATAGGATGGTGGTCCCTTaGGTAGCCAAGGTGACACTA +
Preference number: 2 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNRMVVP*VAKVTL
Trigger: TAGTGTCACCTTGGCTACCCAAGGGACCACCATCCT...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGAGCTTTATACACTGCTaGGTAATGAACGCAAAACCT +
Preference number: 2 (lower is better)
Translates to: SHRQDPLAILATERMRLKSFIHC*VMNAKP
Trigger: AGGTTTTGCGTTCATTACTCAGCAGTGTATAAAGCT...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR TCA 90 bp AAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTGTATCTGATAGTAAGGATGGGATAACACTACTGTaGTTCAAACTTGCACCTCAG +
Preference number: 2 (lower is better)
Translates to: KVKAALVTNAGIVSDSKDGITLL*FKLAPQ
Trigger: CTGAGGTGCAAGTTTGAATCACAGTAGTGTTATCCC...ATCCTTACTATCAGATACAATACCAGCATTTGTCACAAGGGCAGCCTTCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATTCACAACTGATTCAGTaGGGGCTGGAAGAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNSQLIQ*GLEEGS
Trigger: AGAACCCTCTTCCAGCCCTCACTGAATCAGTTGTGA...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGTCTGACTTCACAGTCTaGTTTTCGCCTGTAAGCTAC +
Preference number: 2 (lower is better)
Translates to: TSDILESVSISMLKPDIQSDFTV*FSPVSY
Trigger: GTAGCTTACAGGCGAAAATCAGACTGTGAAGTCAGA...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGGGATCAAAGAAGTCCTaGAATCAACAAGTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: TSDILESVSISMLKPDIQGSKKS*NQQVGK
Trigger: CTTACCCACTTGTTGATTTCAGGACTTCTTTGATCC...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp GCCGAGAATCCATGTAAAGTGTATATATTTTGGTCTCTGAGTAAAGGCAATGTCAATCACAGTCACAACTaGTTCAGTGAGGGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: AENPCKVYIFWSLSKGNVNHSHN*FSEGWK
Trigger: CTTCCAGCCCTCACTGAATCAGTTGTGACTGTGATT...GACATTGCCTTTACTCAGAGACCAAAATATATACACTTTACATGGATTCTCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR TCA 90 bp GAGACATATAAGCAGGAGCAAGTTTTATCATCAGTATGTTGGAGAGAGATGGAGGACACCAAAGGTATGTaGTTTGCCCTCAGTCATAGT +
Preference number: 2 (lower is better)
Translates to: ETYKQEQVLSSVCWREMEDTKGM*FALSHS
Trigger: ACTATGACTGAGGGCAAATCACATACCTTTGGTGTC...CTCCATCTCTCTCCAACATACTGATGATAAAACTTGCTCCTGCTTATATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp TTCATTGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTGTCTCAGCTCACCAGTaGCTGGTACTCAGGATCAAA +
Preference number: 2 (lower is better)
Translates to: FIGKRLFTWNRPWKTQLSVSAHQ*LVLRIK
Trigger: TTTGATCCTGAGTACCAGGCACTGGTGAGCTGAGAC...AGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATTCCAACATCTTAACTTaGCTTTCTGCTTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNSNILT*LSAWLC
Trigger: GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGA...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACGCCTACCATGATCTATaGTTAAACTCTGCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: NPSHRTNEIKVSILLPENAYHDL*LNSALC
Trigger: ACAGAGAGCAGAGTTTAACCATAGATCATGGTAGGC...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTACAGTTACAGTGATTaGCTTGCAGCTTTAGAAGGG +
Preference number: 2 (lower is better)
Translates to: NPSHRTNEIKVSILLPENYSYSD*LAALEG
Trigger: CCCTTCTAAAGCTGCAAGCCAATCACTGTAACTGTA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCTATCTACCTCCTCATTaGAATTTAAACTTCTTAGGG +
Preference number: 2 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCYLPPH*NLNFLG
Trigger: CCCTAAGAAGTTTAAATTCCAATGAGGAGGTAGATA...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR GCA 90 bp TCAGACACATTCATTGATACTGAACTCAAATTAAATCAGCTGTTCAGGGTCCATGTACATGTGCATGGATaGTGTTCTTTCTTCACCTTA +
Preference number: 2 (lower is better)
Translates to: SDTFIDTELKLNQLFRVHVHVHG*CSFFTL
Trigger: TAAGGTGAAGAAAGAACAGCATCCATGCACATGTAC...ATGGACCCTGAACAGCTGATTTAATTTGAGTTCAGTATCAATGAATGTGTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CAA 90 bp GTTCACAAGGGTTTTGTATGTTTCATAAACTGCTTCAGAATTTCATaGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGT +
Preference number: 2 (lower is better)
Translates to: VHKGFVCFINCFRIS*VRDCSHGIDLGKLS
Trigger: ACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAAATTCTGAAGCAGTTTATGAAACATACAAAACCCTTGTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CAA 90 bp TTGGGTAGGATTCTATCAGCTCATTTGTACATAACTATTGTTGTATaGGCCCAAGATGATGTTGATAGAAAAGTAAGCTATTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LGRILSAHLYITIVV*AQDDVDRKVSYSWE
Trigger: TTCCCAAGAATAGCTTACTTTTCTATCAACATCATCTTGGGCCAATACAACAATAGTTATGTACAAATGAGCTGATAGAATCCTACCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 72 bp GTCAGGTGGCTTAGAACCGATGCTTCAGCAACCCCGTaGTGGGTCACTACTCAGAAGGGCTCTGAGGGATCA +
Preference number: 3 (lower is better)
Translates to: VRWLRTDASATP*WVTTQKGSEGS
Trigger: TGATCCCTCAGAGCCCTTCTGAGTAGTGACCCAGCACGGGGTTGCTGAAGCATCGGTTCTAAGCCACCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 72 bp GGGTCCTTTGGCCCAATGCCTTTGACCTTGGGTGGCTaGTGCTTTGAGTCTGCCTGGCTTTCTTCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: GSFGPMPLTLGG*CFESAWLSSQS
Trigger: GCTTTGGGAAGAAAGCCAGGCAGACTCAAAGCAGCAGCCACCCAAGGTCAAAGGCATTGGGCCAAAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp AGGTGGCTTAGAACCGATGCTTCAGCAACCCCGTGCTaGGTCACTACTCAGAAGGGCTCTGAGGGATCAGGA +
Preference number: 3 (lower is better)
Translates to: RWLRTDASATPC*VTTQKGSEGSG
Trigger: TCCTGATCCCTCAGAGCCCTTCTGAGTAGTGACCCAGCACGGGGTTGCTGAAGCATCGGTTCTAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp GTGGCCTGTGCTCCACTAGAGAGGATGGTGGTCCCTTaGGTAGCCAAGGTGACACTATGGACTCCCACAGTA +
Preference number: 3 (lower is better)
Translates to: VACAPLERMVVP*VAKVTLWTPTV
Trigger: TACTGTGGGAGTCCATAGTGTCACCTTGGCTACCCAAGGGACCACCATCCTCTCTAGTGGAGCACAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp CACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTaGGGGAGTCCTAGGATGGGCGGAGCTGTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: HIHVSPTLQLLL*GSPRMGGAVCC
Trigger: GCAGCAGACAGCTCCGCCCATCCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR GCA 72 bp AATGACAGCTTTCCCTCCTGGCTTAGGTCTGCTCTTTaGTGGGTCCTTTGGCCCAATGCCTTTGACCTTGGG +
Preference number: 3 (lower is better)
Translates to: NDSFPSWLRSAL*WVLWPNAFDLG
Trigger: CCCAAGGTCAAAGGCATTGGGCCAAAGGACCCAGCAAAGAGCAGACCTAAGCCAGGAGGGAAAGCTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp GGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTaGCTTGCAGCTTTAGAAGGGAATGTTGAGCCTACC +
Preference number: 3 (lower is better)
Translates to: GLPLLLSYSYSD*LAALEGNVEPT
Trigger: GGTAGGCTCAACATTCCCTTCTAAAGCTGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR CCA 72 bp TTGCACCTCAGTGTGAGTACGCTTGACCAGGGCACGTaGGTGAACAGTCCACATACAGTCCAAGATGAACAG +
Preference number: 3 (lower is better)
Translates to: LHLSVSTLDQGT*VNSPHTVQDEQ
Trigger: CTGTTCATCTTGGACTGTATGTGGACTGTTCACCCACGTGCCCTGGTCAAGCGTACTCACACTGAGGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp GATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTaGCTCTGCTGCTCTTCCTCAGCTGGCCCTGACCTG +
Preference number: 3 (lower is better)
Translates to: DTCSNILTCLSA*LCCSSSAGPDL
Trigger: CAGGTCAGGGCCAGCTGAGGAAGAGCAGCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 72 bp CTCACCAGTGCCTGGTACTCAGGATCAAAGAAGTCCTaGAATCAACAAGTGGGTAAGGGCTCAGCAGGTCCA +
Preference number: 3 (lower is better)
Translates to: LTSAWYSGSKKS*NQQVGKGSAGP
Trigger: TGGACCTGCTGAGCCCTTACCCACTTGTTGATTTCAGGACTTCTTTGATCCTGAGTACCAGGCACTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 72 bp GTGACGTATGACACTTATAAGGCCACATCGACACTTTaGAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACA +
Preference number: 3 (lower is better)
Translates to: VTYDTYKATSTL*RGFPSSSATVT
Trigger: TGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGATGTGGCCTTATAAGTGTCATACGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR GCA 72 bp AAAACAGAGGAACGGTGGGTGCATGGGAGCCCTATATaGAAAGTCAACCCTGCAAGTGTTCTCAGTGACTCA +
Preference number: 3 (lower is better)
Translates to: KTEERWVHGSPI*KVNPASVLSDS
Trigger: TGAGTCACTGAGAACACTTGCAGGGTTGACTTTGCATATAGGGCTCCCATGCACCCACCGTTCCTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR GCA 72 bp AGTCATACTGGGCTCGCTGGGGTCAAGAAGCAGAAATaGAGTTCTCATGGCTGTCAACTCACTGAGATAGAC +
Preference number: 3 (lower is better)
Translates to: SHTGLAGVKKQK*SSHGCQLTEID
Trigger: GTCTATCTCAGTGAGTTGACAGCCATGAGAACTGCATTTCTGCTTCTTGACCCCAGCGAGCCCAGTATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp TCTATGATGAGACATGTAACTTGTTTGCAGGTCAGGTaGCTTAGAACCGATGCTTCAGCAACCCCGTGCTGG +
Preference number: 3 (lower is better)
Translates to: SMMRHVTCLQVR*LRTDASATPCW
Trigger: CCAGCACGGGGTTGCTGAAGCATCGGTTCTAAGCCACCTGACCTGCAAACAAGTTACATGTCTCATCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 72 bp CTGACCTGTAGAATGTCTTGTTTCATAAGCATGGGCTaGCATTGCAATGACAGCTTTCCCTCCTGGCTTAGG +
Preference number: 3 (lower is better)
Translates to: LTCRMSCFISMG*HCNDSFPSWLR
Trigger: CCTAAGCCAGGAGGGAAAGCTGTCATTGCAATGGCAGCCCATGCTTATGAAACAAGACATTCTACAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGAACTGCATTCTCATATaGCGTGGCCTGAACGGTCTT +
Preference number: 3 (lower is better)
Translates to: SHRQDPLAILATERMRLKNCILI*RGLNGL
Trigger: AAGACCGTTCAGGCCACGCAATATGAGAATGCAGTT...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR GCA 72 bp CAGATATCCAGAAGGAGTGACCTTAAACCTGATCTTTaGACCATTCTACTGTGGAAGGTGAAGGCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: QISRRSDLKPDL*TILLWKVKAAL
Trigger: AAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAGGTCACTCCTTCTGGATATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 72 bp TGTAGAATGTCTTGTTTCATAAGCATGGGCTGCCATTaGAATGACAGCTTTCCCTCCTGGCTTAGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: CRMSCFISMGCH*NDSFPSWLRSA
Trigger: AGCAGACCTAAGCCAGGAGGGAAAGCTGTCATTGCAATGGCAGCCCATGCTTATGAAACAAGACATTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp CAATTAGAGTTTCAAAACAGAGGAACGGTGGGTGCATaGGAGCCCTATATGCAAAGTCAACCCTGCAAGTGT +
Preference number: 3 (lower is better)
Translates to: QLEFQNRGTVGA*EPYMQSQPCKC
Trigger: ACACTTGCAGGGTTGACTTTGCATATAGGGCTCCCATGCACCCACCGTTCCTCTGTTTTGAAACTCTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR CCA 72 bp AGTGACCTTAAACCTGATCTTTGCACCATTCTACTGTaGAAGGTGAAGGCTGCCCTTGTGACAAATGCTGGT +
Preference number: 3 (lower is better)
Translates to: SDLKPDLCTILL*KVKAALVTNAG
Trigger: ACCAGCATTTGTCACAAGGGCAGCCTTCACCTTCCACAGTAGAATGGTGCAAAGATCAGGTTTAAGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATCCAATGCCTTTGACCTaGGGTGGCTGCTGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNPMPLT*GGCCFE
Trigger: CTCAAAGCAGCAGCCACCCAAGGTCAAAGGCATTGG...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp TTTTCTCTGGTTAACTTTGCCAAGGCACATTCTCCTTaGTCCTTCACATCTCCCTGTATTCTGTCCACCAGT +
Preference number: 3 (lower is better)
Translates to: FSLVNFAKAHSP*SFTSPCILSTS
Trigger: ACTGGTGGACAGAATACAGGGAGATGTGAAGGACCAAGGAGAATGTGCCTTGGCAAAGTTAACCAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp CCGTGTATACATGTGTCTTTGTGGGTGATACACAGGCTTGGCTCTGCTGCTCTTTTCATTGGTAAGAGATaGTTCACATGGAATAGACCT +
Preference number: 3 (lower is better)
Translates to: PCIHVSLWVIHRLGSAALFIGKR*FTWNRP
Trigger: AGGTCTATTCCATGTGAACAATCTCTTACCAATGAA...AAGAGCAGCAGAGCCAAGCCTGTGTATCACCCACAAAGACACATGTATACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGGATGAGACATGTAACTaGTTTGCAGGTCAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: TSDILESVSISMLKPDIQDETCN*FAGQVA
Trigger: AGCCACCTGACCTGCAAACAAGTTACATGTCTCATC...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp GTATCCCCCTTACACCAAGACAGGTTGTGGCTGTGTGTGTGTGTTCATTCATGTGTTAGCATTTCCATGTaGAAACCAGATATCCAGAAG +
Preference number: 3 (lower is better)
Translates to: VSPLHQDRLWLCVCVHSCVSISM*KPDIQK
Trigger: CTTCTGGATATCTGGTTTCAACATGGAAATGCTAAC...ACATGAATGAACACACACACACAGCCACAACCTGTCTTGGTGTAAGGGGGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 72 bp TCAATGGGGGCAAGTGTAACACGTGTTACAGCCTGGTaGAGACAGCTTCTTGAATGGAAGAAGGACTTTAAA +
Preference number: 3 (lower is better)
Translates to: SMGASVTRVTAW*RQLLEWKKDFK
Trigger: TTTAAAGTCCTTCTTCCATTCAAGAAGCTGTCTTCACCAGGCTGTAACACGTGTTACACTTGCCCCCATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR GCA 72 bp TCACTACTCAGAAGGGCTCTGAGGGATCAGGATGTCTaGATGCTGGCTTTCAATTTTGTGTATTATAAGGTC +
Preference number: 3 (lower is better)
Translates to: SLLRRALRDQDV*MLAFNFVYYKV
Trigger: GACCTTATAATACACAAAATTGAAAGCCAGCATGCAGACATCCTGATCCCTCAGAGCCCTTCTGAGTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp GCTGAAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAACAGAGGAAGTCCCACATTACAGTaGCTCCTTTGGGGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: AEDGERLKLLQLEFQNRGSPTLQ*LLWGSP
Trigger: AGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACT...TCCTCTGTTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR-3UTR CAA 90 bp AAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTGTATCTGATAGTAAGGATTACTGTGATTCAAACTaGCACCTCAGTGTGAGTACG +
Preference number: 3 (lower is better)
Translates to: KVKAALVTNAGIVSDSKDYCDSN*HLSVST
Trigger: CGTACTCACACTGAGGTGCAAGTTTGAATCACAGTA...ATCCTTACTATCAGATACAATACCAGCATTTGTCACAAGGGCAGCCTTCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGAGGAATGTTTTCAACTaGGTTGCAGAGAGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: TSDILESVSISMLKPDIQRNVFN*VAERAK
Trigger: CTTTGCCCTCTCTGCAACCAAGTTGAAAACATTCCT...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR-3UTR CAA 90 bp AACTGTGGATGTCACAAGAAAGGCTACAGTGATGTAATGTTATGTGGAGTGAATTTTCTCTGGTTAACTTaGCCAAGGCACATTCTCCTT +
Preference number: 3 (lower is better)
Translates to: NCGCHKKGYSDVMLCGVNFLWLT*PRHILL
Trigger: AAGGAGAATGTGCCTTGGCAAAGTTAACCAGAGAAA...ATTCACTCCACATAACATTACATCACTGTAGCCTTTCTTGTGACATCCACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp CTATTCTTGGGAAATATGGTACTATGTTCTAAACTTTaGAGAGGCTCATGGACTTTGAGAGGAATCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LFLGNMVLCSKL*RGSWTLRGILW
Trigger: CCAAAGGATTCCTCTCAAAGTCCATGAGCCTCTCCAAAGTTTAGAACATAGTACCATATTTCCCAAGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 72 bp AATTCTATGGCAAATATGATTAATCACAGTCACAACTaGTTCAGTGAGGGCTGGAAGAGGGTTCTATTTTTC +
Preference number: 3 (lower is better)
Translates to: NSMANMINHSHN*FSEGWKRVLFF
Trigger: GAAAAATAGAACCCTCTTCCAGCCCTCACTGAATCAGTTGTGACTGTGATTAATCATATTTGCCATAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR TCA 72 bp TTTAACCCCTTACCTTCCTTCATTGATCTTGGATCTTaGGGAAAGATTACAATGGAAAGTTTTCTGTTAGAC +
Preference number: 3 (lower is better)
Translates to: FNPLPSFIDLGS*GKITMESFLLD
Trigger: GTCTAACAGAAAACTTTCCATTGTAATCTTTCCTCAAGATCCAAGATCAATGAAGGAAGGTAAGGGGTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CCA 72 bp GCCCAAGATGATGTTGATAGAAAAGTAAGCTATTCTTaGGAAATATGGTACTATGTTCTAAACTTTGGAGAG +
Preference number: 3 (lower is better)
Translates to: AQDDVDRKVSYS*EIWYYVLNFGE
Trigger: CTCTCCAAAGTTTAGAACATAGTACCATATTTCCCAAGAATAGCTTACTTTTCTATCAACATCATCTTGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGGTCATCCTCTTTCGATaGGACCCGGGAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSVILFR*DPGALP
Trigger: AGGAAGGGCTCCCGGGTCCCATCGAAAGAGGATGAC...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACGTGCGGCTAAGAGTCTaGATCTGCTCTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPASPTERASCAALAPVHVRLRV*ICSGMK
Trigger: CTTCATCCCAGAGCAGATCCAGACTCTTAGCCGCAC...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR CAA 72 bp GGTGGCCTGTGCTCCACTAGAGAGGATGGTGGTCCCTaGGGTAGCCAAGGTGACACTATGGACTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: GGLCSTREDGGP*GSQGDTMDSHS
Trigger: ACTGTGGGAGTCCATAGTGTCACCTTGGCTACCCAAGGGACCACCATCCTCTCTAGTGGAGCACAGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGCCAGCTGTTGAGCGCTaGATGAAGAGGTGGGGGATA +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSPAVER*MKRWGI
Trigger: TATCCCCCACCTCTTCATTCAGCGCTCAACAGCTGG...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCACGCCTGCCAGGCTCTTaGTGTCCAAGGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLARLPGS*CPRLLP
Trigger: AGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCG...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGACCCATTGCTTCGGTTaGTCATCCTCCACATCTGGG +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSTHCFG*SSSTSG
Trigger: CCCAGATGTGGAGGATGATCAACCGAAGCAATGGGT...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACCATCATCATTCGGGTTaGCAGAGTTGTGTATGGGAC +
Preference number: 4 (lower is better)
Translates to: QPASPTERASCAALAPVHHHHSG*QSCVWD
Trigger: GTCCCATACACAACTCTGGCAACCCGAATGATGATG...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGGCTGCCATGCTGCAGTaGAATGCCATACCCCCGGTC +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWAAMLQ*NAIPPV
Trigger: GACCGGGGGTATGGCATTGCACTGCAGCATGGCAGC...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGATGTCGCCACTCTGCTaGAGCTCCAGGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSMSPLC*SSRILC
Trigger: ACAAAGGATCCTGGAGCTGCAGCAGAGTGGCGACAT...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACGGCTGTCGTCATCTGTaGACAAGCTATTTACACGTC +
Preference number: 4 (lower is better)
Translates to: QPASPTERASCAALAPVHGCRHL*TSYLHV
Trigger: GACGTGTAAATAGCTTGTGCACAGATGACGACAGCC...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGAGTCTGGATCTGCTCTaGGATGAAGGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSSLDLL*DEGGGG
Trigger: ACCACCACCACCTTCATCCCAGAGCAGATCCAGACT...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTTCTCGAGGACAGCTATaGGGCAGGAGAGCACAATTC +
Preference number: 4 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSSRGQL*GRRAQF
Trigger: GAATTGTGCTCTCCTGCCTCATAGCTGTCCTCGAGA...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCACCACAAGAAGCACTGTaGCAGCAATGCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLAPQEAL*QQCRPT
Trigger: TGTGGGCCTGCATTGCTGGCACAGTGCTTCTTGTGG...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCGGTCATCGATCCCATTTaGAATCGTGGGGGATTAAGC +
Preference number: 4 (lower is better)
Translates to: QGVHAPRDSSPWKQSAFSVIDPI*NRGGLS
Trigger: GCTTAATCCCCCACGATTGCAAATGGGATCGATGAC...CGAGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTGCTTTGCATCCACTaGGGAGTACAGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWLLCIH*GVQVTL
Trigger: CAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAG...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCAGAGGCAGCTTTTGCTaGGAGTGTGCGGCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRARGSFC*ECAAKS
Trigger: ACTCTTAGCCGCACACTCTCAGCAAAAGCTGCCTCT...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTGATACAGGACAAGCTTaGCATGCTGTGCCACTTACG +
Preference number: 4 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSDTGQA*HAVPLT
Trigger: CGTAAGTGGCACAGCATGGCAAGCTTGTCCTGTATC...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCGCACTGTGCCAGCAATaGAGGCCCACAGAGATAGAT +
Preference number: 4 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRAALCQQ*RPTEID
Trigger: ATCTATCTCTGTGGGCCTGCATTGCTGGCACAGTGC...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGAGTACAGGTCACACTaGCCGTTCTTAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: DTLKGLPLLLSYSYSDWLEYRSH*PFLGHH
Trigger: ATGGTGGCCTAAGAACGGCCAGTGTGACCTGTACTC...AAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGATCTGCTCCAGGGCTTaGCGTGTTGGCAAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWICSRA*RVGKVS
Trigger: TGACACTTTGCCAACACGCCAAGCCCTGGAGCAGAT...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTACTGGAGGGACCCAGCTaGTGTGCAACCAATGGAGCT +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVLEGPS*CATNGA
Trigger: AGCTCCATTGGTTGCACATCAGCTGGGTCCCTCCAG...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCATCTCCCGGTCTGGAGTaGTGGTTAAAGCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLASPGLE*WLKLKS
Trigger: GGATTTCAGCTTTAACCATCACTCCAGACCGGGAGA...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCACTCCAGGATCCTTTGTaGAAAGACATCACGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLALQDPL*KDITVG
Trigger: CCCTACCGTGATGTCTTTTCACAAAGGATCCTGGAG...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCACTGAAATCACTGATCTaGTCCAGGGCTTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLALKSLI*SRAWRV
Trigger: AACACGCCAAGCCCTGGAGCAGATCAGTGATTTCAG...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GTTGCCTTTGGTCCACAGCTAAAGGACACTCGACAGCAGTGGAGATTTTGTGGAGGTGGGGGATATGCATaGCATCTGCCAAAGACTGGA +
Preference number: 4 (lower is better)
Translates to: VAFGPQLKDTRQQWRFCGGGGYA*HLPKTG
Trigger: TCCAGTCTTTGGCAGATGCCATGCATATCCCCCACC...TCCACAAAATCTCCACTGCTGTCGAGTGTCCTTTAGCTGTGGACCAAAGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp GTTGCCTTTGGTCCACAGCTAAAGGACACTCGACAGCAGTGGAGATTTTGTGGAAAGAAGGACTCCCACTaGGTAGTCCATGTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: VAFGPQLKDTRQQWRFCGKKDSH*VVHVAC
Trigger: ACACGCTACATGGACTACTCAGTGGGAGTCCTTCTT...TCCACAAAATCTCCACTGCTGTCGAGTGTCCTTTAGCTGTGGACCAAAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGAAGAGGTGGGGGATATaGATGGCATCTGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: HHIHVSPTLQLLLWGSPRKRWGI*MASAKD
Trigger: GTCTTTGGCAGATGCCATGCATATCCCCCACCTCTT...CCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGTCCATGTCGCCACTCTaGTGCAGCTCCAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: SHRQDPLAILATERMRLKSMSPL*CSSRIL
Trigger: AAGGATCCTGGAGCTGCAGCAGAGTGGCGACATGGA...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCAACACGTCTATGGAGGTaGTCCAGGTCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLATRLWR*SRSISL
Trigger: CAAGGAAATTGACCTGGAGCACCTCCATAGACGTGT...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTAAAAGGGCCAGTTCGGTaGTCAGGCACACTGCCGAAA +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVKGPVR*SGTLPK
Trigger: TTTCGGCAGTGTGCCTGAGCACCGAACTGGCCCTTT...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGATGAAGAAATTCGATaGTTGCCACGGAAACAGCGC +
Preference number: 4 (lower is better)
Translates to: DTLKGLPLLLSYSYSDWLDEEIR*LPRKQR
Trigger: GCGCTGTTTCCGTGGCAACCATCGAATTTCTTCATC...AAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR CAA 72 bp ATAAGACATCACATCCATGTTAGTCCCACATTACAGTaGCTCCTTTGGGGGAGTCCTAGGATGGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: IRHHIHVSPTLQ*LLWGSPRMGGA
Trigger: AGCTCCGCCCATCCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGATGTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTACCACGGAAACAGCGCTaGCTTATATTCTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVPRKQR*LIFWGT
Trigger: AGTCCCCCAGAATATAAGTCAGCGCTGTTTCCGTGG...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp TGTCACTCTGATACCTGTTCCAACATCTTAACTTGCCTTTCTGCTTGGCTCTGCTCTCGAGGACAGCTATaGGGCAGGAGAGCACAATTC +
Preference number: 4 (lower is better)
Translates to: CHSDTCSNILTCLSAWLCSRGQL*GRRAQF
Trigger: GAATTGTGCTCTCCTGCCTCATAGCTGTCCTCGAGA...GCAGAGCCAAGCAGAAAGGCAAGTTAAGATGTTGGAACAGGTATCAGAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp GACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTAGGGGTCAAGTCAATTaGCGAGGTGGAAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: DTLKGLPLLLSYSYSDWLRGQVN*RGGKLF
Trigger: AAACAGTTTTCCACCTCGTCAATTGACTTGACCCCT...AAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCAAAGGCCAAGATGCCCTaGTTCATAAGTTCACATGCT +
Preference number: 4 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLAKAKMP*FISSHA
Trigger: AGCATGTGAACTTATGAACCAGGGCATCTTGGCCTT...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GTTGCCTTTGGTCCACAGCTAAAGGACACTCGACAGCAGTGGAGATTTTGTGGATGTCCCATCCTCTTGTaGGCTTCCATATTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: VAFGPQLKDTRQQWRFCGCPILL*ASIFVV
Trigger: GACCACAAATATGGAAGCCCACAAGAGGATGGGACA...TCCACAAAATCTCCACTGCTGTCGAGTGTCCTTTAGCTGTGGACCAAAGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
3UTR CAA 72 bp AGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTaGTCTTGGTGGAAGGGCGATACACACAGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RLFTWNRPWKTQ*SWWKGDTHRRH
Trigger: GTGGCGCCTGTGTGTATCGCCCTTCCACCAAGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTGGGGTCCCAGCTGTTaGGCGCTGAATGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENWGPSC*ALNEEV
Trigger: CACCTCTTCATTCAGCGCTCAACAGCTGGGACCCCA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTTCTGTTGCTCCGGGTaGGGCCACAGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENFCCSG*GHSHFL
Trigger: CAAGAAGTGGCTGTGGCCTCACCCGGAGCAACAGAA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTGTTGGCTGTATAAGATaGGATGACAATCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSVGCIR*DDNQSK
Trigger: TTTGCTCTGATTGTCATCTCATCTTATACAGCCAAC...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCAAAACATTGTTTTCTaGCCCATTGCTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSQNIVF*PIASVD
Trigger: ATCAACCGAAGCAATGGGTCAGAAAACAATGTTTTG...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp TTCATTGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTCGCCTGCCAGGCTCTTaGTGTCCAAGGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FIGKRLFTWNRPWKTQLSRLPGS*CPRLLP
Trigger: AGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCG...AGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CCA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCAAGATTTCCTCATTCTaGTTGAGGTCACCAACTGCT +
Preference number: 4 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRAKISSF*LRSPTA
Trigger: AGCAGTTGGTGACCTCAACCAGAATGAGGAAATCTT...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GGGAGCCCTATATGCAAAGTCAACCCTGCAAGTGTTCTCAGTGACTCAGTGCCCCATCCAAAACATCAATaGAGAAGCCCTGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: GSPICKVNPASVLSDSVPHPKHQ*RSPGIS
Trigger: AGAAATACCAGGGCTTCTCCATTGATGTTTTGGATG...GGGCACTGAGTCACTGAGAACACTTGCAGGGTTGACTTTGCATATAGGGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGGGATATCTGTTTGCTTaGACAGATCCTGAAGAGACT +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWGYLFA*TDPEET
Trigger: AGTCTCTTCAGGATCTGTCCAAGCAAACAGATATCC...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTATTTACACGTCTATaGAGGTGCTCCAGGTCAATT +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWLFTRL*RCSRSI
Trigger: AATTGACCTGGAGCACCTCCATAGACGTGTAAATAG...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp CATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGGACAGGTGGACGAACTaGAAGAGTATAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: HHIHVSPTLQLLLWGSPRDRWTN*KSIVII
Trigger: AATGATGACTATACTCTTTCAGTTCGTCCACCTGTC...CCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTAGCTTGGAGTTTTTCCTaGTACAGGACAAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVAWSFS*YRTSLP
Trigger: TGGCAAGCTTGTCCTGTATCAGGAAAAACTCCAAGC...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGGTTTACGGACACCCCTaGCAAGTTCTTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: SHRQDPLAILATERMRLKVYGHP*QVLLHS
Trigger: ACTATGGAGAAGAACTTGGCAGGGGTGTCCGTAAAC...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACCCATTAGGAGCCCTGTaGCTAAAAGGGCCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENPLGAL*LKGPVR
Trigger: CCGAACTGGCCCTTTTAGGCACAGGGCTCCTAATGG...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGGAGTACAGGTCACACTaGCCGTTCTTAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: TSDILESVSISMLKPDIQEYRSH*PFLGHH
Trigger: ATGGTGGCCTAAGAACGGCCAGTGTGACCTGTACTC...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTAGTGGAAAACTGTTTATaGGGGCTGTCGTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVVENCL*GLSSSV
Trigger: CACAGATGACGACAGCCCCCATAAACAGTTTTCCAC...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp TCAGACACATTCATTGATACTGAACTCAAATTAAATCAGCTGTTCAGGGTCCATTGGAGCCTCTTTCGATaGGACCCGGGAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDTFIDTELKLNQLFRVHWSLFR*DPGALP
Trigger: AGGAAGGGCTCCCGGGTCCCATCGAAAGAGGCTCCA...ATGGACCCTGAACAGCTGATTTAATTTGAGTTCAGTATCAATGAATGTGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CCA 90 bp AAGGTGAAGGCTGCCCTTGTGACAAATGCTGGTATTGTATCTGATAGTAAGGATGAGTGGTGCAGGTCATaGCTGGATGCCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KVKAALVTNAGIVSDSKDEWCRS*LDAWFF
Trigger: GAAAAACCAGGCATCCAGCCATGACCTGCACCACTC...ATCCTTACTATCAGATACAATACCAGCATTTGTCACAAGGGCAGCCTTCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CAA 72 bp GGGCTGGAAGAGGGTTCTATTTTTCTCTGGTTAACTTaGCCAAGGCACATTCTCCTTGGTCCTTCACATCTC +
Preference number: 4 (lower is better)
Translates to: GLEEGSIFLWLT*PRHILLGPSHL
Trigger: GAGATGTGAAGGACCAAGGAGAATGTGCCTTGGCAAAGTTAACCAGAGAAAAATAGAACCCTCTTCCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGGCCACCATTTGTGCTTaGGAATGTCCATGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQATICA*ECPCRH
Trigger: GTGGCGACATGGACATTCTCAAGCACAAATGGTGGC...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTAGGTCACCAACTGCTGTaGGGAATACTTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVGHQLL*GILHHL
Trigger: AAGATGATGAAGTATTCCGCACAGCAGTTGGTGACC...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTAATCATCCTCCACATCTaGGAATACATGCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVIILHI*EYMLSL
Trigger: GAGAGACAGCATGTATTCCCAGATGTGGAGGATGAT...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGTTCATGCGGACATGCTaGTATACTGCCGAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQFMRTC*YTAESK
Trigger: CTTGGACTCGGCAGTATATCAGCATGTCCGCATGAA...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CCTGCAAGTGTTCTCAGTGACTCAGTGCCCATTCCCTATACTCAAAGTACAGTACTTGAAAAGGGTTGTTaGCATCAACAAACGTCACAG +
Preference number: 4 (lower is better)
Translates to: PASVLSDSVPIPYTQSTVLEKGC*HQQTSQ
Trigger: CTGTGACGTTTGTTGATGGCAACAACCCTTTTCAAG...TACTGTACTTTGAGTATAGGGAATGGGCACTGAGTCACTGAGAACACTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCGTTCATAAGTTCACATaGTTCTTGAACAGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRAVHKFT*FLNSLK
Trigger: TTTCAAGCTGTTCAAGAAGCATGTGAACTTATGAAC...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGAATAAATTTCTGCCATaGATACTCTGTGACTACTCT +
Preference number: 4 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWNKFLP*ILCDYS
Trigger: AGAGTAGTCACAGAGTATGCATGGCAGAAATTTATT...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp GCTGAAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAACAGAGGAATGGACCGCCCTCCTTaGCAGGGCTTGGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AEDGERLKLLQLEFQNRGMDRPP*QGLEFF
Trigger: GAAAAACTCCAAGCCCTGGCAAGGAGGGCGGTCCAT...TCCTCTGTTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGCTAAGAGTCTGGATCTaGTCTGGGATGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQLRVWI*SGMKVV
Trigger: CACCACCTTCATCCCAGAGCAGATCCAGACTCTTAG...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp ATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGAACATCCATTCCCTGCTaGGATACTTTGTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ITSMLVPHYSCSFGGVLGTSIPC*DTLSKN
Trigger: ATTTTTGGACAAAGTATCCCAGCAGGGAATGGATGT...TCCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp TTCATTGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTCTCATTTGGCAGGGCTaGAGCCTCTTTCGATGGGAC +
Preference number: 4 (lower is better)
Translates to: FIGKRLFTWNRPWKTQLSLIWQG*SLFRWD
Trigger: GTCCCATCGAAAGAGGCTCCAGCCCTGCCAAATGAG...AGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
3UTR CAA 72 bp TTTTCGCCTGTAAGCTACTGCAGGAATGTTTTCAACTaGGTTGCAGAGAGGGCAAAGTGCTCTATGATGAGA +
Preference number: 4 (lower is better)
Translates to: FSPVSYCRNVFN*VAERAKCSMMR
Trigger: TCTCATCATAGAGCACTTTGCCCTCTCTGCAACCAAGTTGAAAACATTCCTGCAGTAGCTTACAGGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp TCACATAGGCAGGACCCTCTAGCAATCCTAGCCACAGAACGAATGAGATTAAAGTTAATGATGATCCAGTaGCAGTCAAAAGCAACCAGA +
Preference number: 4 (lower is better)
Translates to: SHRQDPLAILATERMRLKLMMIQ*QSKATR
Trigger: TCTGGTTGCTTTTGACTGTCACTGGATCATCATTAA...CTTTAATCTCATTCGTTCTGTGGCTAGGATTGCTAGAGGGTCCTGCCTATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp GAAGTAGAGCGGGGAGAGAAAGAACTAGAATTGTTACTAATTATCCTGATTTCTTGCTTGGACAGATCCTaGAGAGACTGGATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EVERGEKELELLLIILISCLDRS*RDWMEL
Trigger: GAGCTCCATCCAGTCTCTTCAGGATCTGTCCAAGCA...AGAAATCAGGATAATTAGTAACAATTCTAGTTCTTTCTCTCCCCGCTCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp TCAGACACATTCATTGATACTGAACTCAAATTAAATCAGCTGTTCAGGGTCCATCTGCTTTGCATCCACTaGGGAGTACAGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: SDTFIDTELKLNQLFRVHLLCIH*GVQVTL
Trigger: CAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAG...ATGGACCCTGAACAGCTGATTTAATTTGAGTTCAGTATCAATGAATGTGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGGTGGTGGTGGTGATGTaGGTGTTTCTGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQVVVVM*VFLKSL
Trigger: CAGTGATTTCAGAAACACTCACATCACCACCACCAC...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGAAGAAATTCGATGGTTaGCACGGAAACAGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQKKFDG*HGNSAD
Trigger: GTCAGCGCTGTTTCCGTGGCAACCATCGAATTTCTT...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp CTGAAAACACAGGATAAATTCTTGCTTCCTACTTACCACATCGAGTTTAAGGATGGGACTTCCCCACCTTaGTGTACAAAGGACCCATAC +
Preference number: 4 (lower is better)
Translates to: LKTQDKFLLPTYHIEFKDGTSPP*CTKDPY
Trigger: GTATGGGTCCTTTGTACAGCAAGGTGGGGAAGTCCC...ATCCTTAAACTCGATGTGGTAAGTAGGAAGCAAGAATTTATCCTGTGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GAAGTAGAGCGGGGAGAGAAAGAACTAGAATTGTTACTAATTATCCTGATTTCTCAGGGCTTGGCGTGTTaGCAAAGTGTCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVERGEKELELLLIILISQGLAC*QSVNVQ
Trigger: CTGGACATTGACACTTTGCCAACACGCCAAGCCCTG...AGAAATCAGGATAATTAGTAACAATTCTAGTTCTTTCTCTCCCCGCTCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GAGACATATAAGCAGGAGCAAGTTTTATCATCAGTATGTTGGAGAGAGATGGAGTCATGGCTGGATGCCTaGTTTTTCCAGCTATTACCG +
Preference number: 4 (lower is better)
Translates to: ETYKQEQVLSSVCWREMESWLDA*FFQLLP
Trigger: CGGTAATAGCTGGAAAAACCAGGCATCCAGCCATGA...CTCCATCTCTCTCCAACATACTGATGATAAAACTTGCTCCTGCTTATATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR TCA 90 bp CTGAAAACACAGGATAAATTCTTGCTTCCTACTTACCACATCGAGTTTAAGGATTTTCCTCATTCTGGTTaGGGTCACCAACTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LKTQDKFLLPTYHIEFKDFPHSG*GHQLLC
Trigger: GCACAGCAGTTGGTGACCTCAACCAGAATGAGGAAA...ATCCTTAAACTCGATGTGGTAAGTAGGAAGCAAGAATTTATCCTGTGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACCCATATTTTACCTTTTaGATGCCTGCTTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENPYFTF*MPAWDS
Trigger: GGAGTCCCAAGCAGGCATTCAAAAGGTAAAATATGG...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACGCAACATCCATTCCCTaGTGGGATACTTTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENATSIP*WDTLSK
Trigger: TTTGGACAAAGTATCCCAGCAGGGAATGGATGTTGC...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTTAGGCCACCATTTGTaGTTGAGAATGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENLGHHL*LRMSMS
Trigger: CGACATGGACATTCTCAAGCACAAATGGTGGCCTAA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp TTCATTGGTAAGAGATTGTTCACATGGAATAGACCTTGGAAAACTCAGTTGTCTCATTGCTGTCTCATTTaGCAGGGCTGGAGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FIGKRLFTWNRPWKTQLSHCCLI*QGWSLF
Trigger: AAAGAGGCTCCAGCCCTGCCAAATGAGACAGCAATG...AGACAACTGAGTTTTCCAAGGTCTATTCCATGTGAACAATCTCTTACCAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR GCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACAATCTCCATATTCTGTaGAAAGGGATCCTTCGGATC +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENNLHIL*KGILRI
Trigger: GATCCGAAGGATCCCTTTGCACAGAATATGGAGATT...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp TCAGACACATTCATTGATACTGAACTCAAATTAAATCAGCTGTTCAGGGTCCATGCTTCTTTCAGACATTaGTGTCTCATTTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SDTFIDTELKLNQLFRVHASFRH*CLIWQG
Trigger: GCCCTGCCAAATGAGACAGCAATGTCTGAAAGAAGC...ATGGACCCTGAACAGCTGATTTAATTTGAGTTCAGTATCAATGAATGTGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CCA 90 bp TTACTGTACATAAGAAAAAGTTTGAATACTGTACAATCACATGAAGGGGGTGGGTCCTCCAGCTTCTTATaGAAGGCATTCGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLYIRKSLNTVQSHEGGGSSSFL*KAFASR
Trigger: TCTGCTTGCGAATGCCTTCCATAAGAAGCTGGAGGA...CCCACCCCCTTCATGTGATTGTACAGTATTCAAACTTTTTCTTATGTACAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp TTACTGTACATAAGAAAAAGTTTGAATACTGTACAATCACATGAAGGGGGTGGGTTGTTTTCCACCTTTTaGAGGGCAACATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LLYIRKSLNTVQSHEGGGLFSTF*RATSIP
Trigger: GGGAATGGATGTTGCCCTTCAAAAGGTGGAAAACAA...CCCACCCCCTTCATGTGATTGTACAGTATTCAAACTTTTTCTTATGTACAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp GCTGAAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAACAGAGGATTCCAATGGACCTTCTaGCAAGTTCCTGAACATCCA +
Preference number: 4 (lower is better)
Translates to: AEDGERLKLLQLEFQNRGFQWTF*QVPEHP
Trigger: TGGATGTTCAGGAACTTGTCAGAAGGTCCATTGGAA...TCCTCTGTTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp AAAAACTGCATTCTCATATTGCGTGGCCTGAACGGTCTTCAAATCATTTCACAGTATATTCTGGGGGACTaGAAATGTCTGCCGAATTAT +
Preference number: 4 (lower is better)
Translates to: KNCILILRGLNGLQIISQYILGD*KCLPNY
Trigger: ATAATTCGGCAGACATTTCCAGTCCCCCAGAATATA...CTGTGAAATGATTTGAAGACCGTTCAGGCCACGCAATATGAGAATGCAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR TCA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACCTGTATAAGATGAGATaGCAATCAGAGCAAATAACC +
Preference number: 4 (lower is better)
Translates to: NPSHRTNEIKVSILLPENLYKMR*QSEQIT
Trigger: GGTTATTTGCTCTGATTGTCATCTCATCTTATACAG...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR GCA 90 bp GCTGAAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAACAGAGGAATTTTACCTTTTGAATaGCTGCTTGGGACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AEDGERLKLLQLEFQNRGILPFE*LLGTPK
Trigger: TTTTGGAGTCCCAAGCAGGCATTCAAAAGGTAAAAT...TCCTCTGTTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CCA 90 bp GAAGTAGAGCGGGGAGAGAAAGAACTAGAATTGTTACTAATTATCCTGATTTCTTTGTCCAAAAATTCCTaGATTCCACGGATATCATAT +
Preference number: 4 (lower is better)
Translates to: EVERGEKELELLLIILISLSKNS*IPRISY
Trigger: ATATGATATCCGTGGAATCCAGGAATTTTTGGACAA...AGAAATCAGGATAATTAGTAACAATTCTAGTTCTTTCTCTCCCCGCTCTACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 90 bp CCCGGGAGCCCTTCCTCCGGCTCCACCACGTCTCGAGGACAGCTATaGGGCAGGAGAGCACAATTCCCGCGGCCAGGATGCAGAACACGC +
Preference number: 5 (lower is better)
Translates to: PGSPSSGSTTSRGQL*GRRAQFPRPGCRTR
Trigger: GCGTGTTCTGCATCCTGGCCGCGGGAATTGTGCTCTCCTGCCTCATAGCTGTCCTCGAGACGTGGTGGAGCCGGAGGAAGGGCTCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS CCA 90 bp TTCAGACATTGCTGTCTCATTTGGCAGGGCTGGAGCCTCTTTCGATaGGACCCGGGAGCCCTTCCTCCGGCTCCACCACGTCTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: FRHCCLIWQGWSLFR*DPGALPPAPPRLED
Trigger: GTCCTCGAGACGTGGTGGAGCCGGAGGAAGGGCTCCCGGGTCCCATCGAAAGAGGCTCCAGCCCTGCCAAATGAGACAGCAATGTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS TCA 90 bp GCACAATTCCCGCGGCCAGGATGCAGAACACGCCTGCCAGGCTCTTaGTGTCCAAGGCTCCTCCCTTCTGCTTTGCATCCACTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: AQFPRPGCRTRLPGS*CPRLLPSALHPLRS
Trigger: ACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGTGTTCTGCATCCTGGCCGCGGGAATTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACCCAGGGCTTGGCGTGTaGGCAAAGTGTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: QPASPTERASCAALAPVHPGLGV*AKCQCP
Trigger: TGGACATTGACACTTTGCCAACACGCCAAGCCCTGG...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACTGGGACTTCCCCACCTaGCTGTACAAAGGACCCATA +
Preference number: 5 (lower is better)
Translates to: QPASPTERASCAALAPVHWDFPT*LYKGPI
Trigger: TATGGGTCCTTTGTACAGCAAGGTGGGGAAGTCCCA...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 90 bp GTGCTCAGGCACACTGCCGAAAGCGAAGCCAGAGGCAGCTTTTGCTaGGAGTGTGCGGCTAAGAGTCTGGATCTGCTCTGGGATGAAGGT +
Preference number: 5 (lower is better)
Translates to: VLRHTAESEARGSFC*ECAAKSLDLLWDEG
Trigger: ACCTTCATCCCAGAGCAGATCCAGACTCTTAGCCGCACACTCTCAGCAAAAGCTGCCTCTGGCTTCGCTTTCGGCAGTGTGCCTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AAGACAGGACACCTCCAAGTAGAAGTGGGTAGAAGAGGGGTTCAGATGAGAGCCGGCCACAGCCACTTCTaGGGGTCCCAGCTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: KTGHLQVEVGRRGVQMRAGHSHF*GSQLLS
Trigger: GCTCAACAGCTGGGACCCCAAGAAGTGGCTGTGGCC...GGCTCTCATCTGAACCCCTCTTCTACCCACTTCTACTTGGAGGTGTCCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCCTCGGTCGGGGTCATaGCCCAGATTGAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWPRSGS*PRLSPR
Trigger: TCTGGGGCTCAATCTGGGCAATGACCCCGACCGAGG...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp CAGAACACGCCTGCCAGGCTCTTGATGTCCAAGGCTCCTCCCTTCTaGTTTGCATCCACTGAGGAGTACAGGTCACACTGGCCGTTCTTA +
Preference number: 5 (lower is better)
Translates to: QNTPARLLMSKAPPF*FASTEEYRSHWPFL
Trigger: TAAGAACGGCCAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp CAACCTGCCTCTCCAACTGAAAGGGCCTCCTGCGCTGCCCTAGCTCCTGTACACTCCAGGTCAATTTCCTaGTCATCCTCTTTCGATGGG +
Preference number: 5 (lower is better)
Translates to: QPASPTERASCAALAPVHSRSIS*SSSFDG
Trigger: CCCATCGAAAGAGGATGACAAGGAAATTGACCTGGA...GTGTACAGGAGCTAGGGCAGCGCAGGAGGCCCTTTCAGTTGGAGAGGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 90 bp CAGGCTCTTGATGTCCAAGGCTCCTCCCTTCTGCTTTGCATCCACTaGGGAGTACAGGTCACACTGGCCGTTCTTAGGCCACCATTTGTG +
Preference number: 5 (lower is better)
Translates to: QALDVQGSSLLLCIH*GVQVTLAVLRPPFV
Trigger: CACAAATGGTGGCCTAAGAACGGCCAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAGCCTTGGACATCAAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCAGGGTCATTGCCCAGATaGAGCCCCAGAGTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLAGSLPR*SPRVGV
Trigger: TACTCCCACTCTGGGGCTCAATCTGGGCAATGACCC...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 90 bp GTGGACGAACTGAAAGAGTATAGTCATCATTTCTGTTGCTCCGGGTaGGGCCACAGCCACTTCTTGGGGTCCCAGCTGTTGAGCGCTGAA +
Preference number: 5 (lower is better)
Translates to: VDELKEYSHHFCCSG*GHSHFLGSQLLSAE
Trigger: TTCAGCGCTCAACAGCTGGGACCCCAAGAAGTGGCTGTGGCCTCACCCGGAGCAACAGAAATGATGACTATACTCTTTCAGTTCGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 90 bp GGCCTTCCTAGTTGTGCAGAGTGGTGCAGGTCATGGCTGGATGCCTaGTTTTTCCAGCTATTACCGCCAAGCTTCAAACACGGCCTTAAT +
Preference number: 5 (lower is better)
Translates to: GLPSCAEWCRSWLDA*FFQLLPPSFKHGLN
Trigger: ATTAAGGCCGTGTTTGAAGCTTGGCGGTAATAGCTGGAAAAACCAGGCATCCAGCCATGACCTGCACCACTCTGCACAACTAGGAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS CCA 90 bp GGGTCATCAAGAGGCCTTCCTAGTTGTGCAGAGTGGTGCAGGTCATaGCTGGATGCCTGGTTTTTCCAGCTATTACCGCCAAGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: GSSRGLPSCAEWCRS*LDAWFFQLLPPSFK
Trigger: TTTGAAGCTTGGCGGTAATAGCTGGAAAAACCAGGCATCCAGCCATGACCTGCACCACTCTGCACAACTAGGAAGGCCTCTTGATGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTCCATGTCCCATCCTCTaGTGGGCTTCCATATTTGTG +
Preference number: 5 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSPCPIL*WASIFV
Trigger: CACAAATATGGAAGCCCACAAGAGGATGGGACATGG...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCAGACCCATTGCTTCGGTaGATCATCCTCCACATCTGG +
Preference number: 5 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLADPLLR*IILHIW
Trigger: CCAGATGTGGAGGATGATCAACCGAAGCAATGGGTC...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGTTAACTCCACCCTTCTaGATGGTCTCCAGCATGGAC +
Preference number: 5 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWLTPPF*MVSSMD
Trigger: GTCCATGCTGGAGACCATCAAGAAGGGTGGAGTTAA...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AACAAGGTGTGCATGCTCCGCGGGACTCGTCACCCTGGAAACAAAGTGCTTTCTTGTCATCGATCCCATTaGCAATCGTGGGGGATTAAG +
Preference number: 5 (lower is better)
Translates to: NKVCMLRGTRHPGNKVLSCHRSH*QSWGIK
Trigger: CTTAATCCCCCACGATTGCAAATGGGATCGATGACA...AGAAAGCACTTTGTTTCCAGGGTGACGAGTCCCGCGGAGCATGCACACCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp GACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTCCATCATCATTCGGGTaGCCAGAGTTGTGTATGGGA +
Preference number: 5 (lower is better)
Translates to: DTLKGLPLLLSYSYSDWLPSSFG*PELCMG
Trigger: TCCCATACACAACTCTGGCAACCCGAATGATGATGG...AAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGACGCCTGCCAGGCTCTaGATGTCCAAGGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: TSDILESVSISMLKPDIQTPARL*MSKAPP
Trigger: GGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGT...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS GCA 90 bp TTAAGAGGTAGACCAAGAGTCCCACAAGAAGCACTGTGCCAGCAATaGAGGCCCACAGAGATAGATCAAATGGTGCAAGGCAGGCAAACA +
Preference number: 5 (lower is better)
Translates to: LRGRPRVPQEALCQQ*RPTEIDQMVQGRQT
Trigger: TGTTTGCCTGCCTTGCACCATTTGATCTATCTCTGTGGGCCTGCATTGCTGGCACAGTGCTTCTTGTGGGACTCTTGGTCTACCTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp GCCCCTTCATGCGGACATGCTGATATACTGCCGAGTCCAAGACTGTaGCATAAGGGATATCTGTTTGCTTGGACAGATCCTGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: APSCGHADILPSPRL*HKGYLFAWTDPEET
Trigger: AGTCTCTTCAGGATCTGTCCAAGCAAACAGATATCCCTTATGGCACAGTCTTGGACTCGGCAGTATATCAGCATGTCCGCATGAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp TCTGGGAATACATGCTGTCTCTCTCGAAAGGATTCAGCCCCTTCATaGGGACATGCTGATATACTGCCGAGTCCAAGACTGTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: SGNTCCLSRKDSAPS*GHADILPSPRLCHK
Trigger: CTTATGGCACAGTCTTGGACTCGGCAGTATATCAGCATGTCCGCATGAAGGGGCTGAATCCTTTCGAGAGAGACAGCATGTATTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp AGCTATTACCGCCAAGCTTCAAACACGGCCTTAATGGCCAAGCATTaGTTCTTTCAGACATTGCTGTCTCATTTGGCAGGGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SYYRQASNTALMAKH*FFQTLLSHLAGLEP
Trigger: AGGCTCCAGCCCTGCCAAATGAGACAGCAATGTCTGAAAGAAGCAATGCTTGGCCATTAAGGCCGTGTTTGAAGCTTGGCGGTAATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGATTTCCTCATTCTGGTaGAGGTCACCAACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWISSFW*RSPTAV
Trigger: CACAGCAGTTGGTGACCTCAACCAGAATGAGGAAAT...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp GGGAGCCCTATATGCAAAGTCAACCCTGCAAGTGTTCTCAGTGACTCAGTGCCCTCACTTATGAAGGATTaGGCTGTGGCAGGATTCATG +
Preference number: 5 (lower is better)
Translates to: GSPICKVNPASVLSDSVPSLMKD*AVAGFM
Trigger: CATGAATCCTGCCACAGCCAAATCCTTCATAAGTGA...GGGCACTGAGTCACTGAGAACACTTGCAGGGTTGACTTTGCATATAGGGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp TCTCTCGAAAGGATTCAGCCCCTTCATGCGGACATGCTGATATACTaGCGAGTCCAAGACTGTGCCATAAGGGATATCTGTTTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SLERIQPLHADMLIY*RVQDCAIRDICLLG
Trigger: TCCAAGCAAACAGATATCCCTTATGGCACAGTCTTGGACTCGGCAGTATATCAGCATGTCCGCATGAAGGGGCTGAATCCTTTCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 90 bp TTATGGGGGCTGTCGTCATCTGTGCACAAGCTATTTACACGTCTATaGAGGTGCTCCAGGTCAATTTCCTTGTCATCCTCTTTCGATGGG +
Preference number: 5 (lower is better)
Translates to: LWGLSSSVHKLFTRL*RCSRSISLSSSFDG
Trigger: CCCATCGAAAGAGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp GACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTTGCTTCTTGAACAGCTaGAAAAGGGTTGTTGCCATC +
Preference number: 5 (lower is better)
Translates to: DTLKGLPLLLSYSYSDWLCFLNS*KRVVAI
Trigger: GATGGCAACAACCCTTTTCAAGCTGTTCAAGAAGCA...AAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp CAAAGGGATCCTTCGGATCACACAGTGATGAAGAAATTCGATGGTTaGCACGGAAACAGCGCTGACTTATATTCTGGGGGACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: QRDPSDHTVMKKFDG*HGNSADLYSGGLEM
Trigger: CATTTCCAGTCCCCCAGAATATAAGTCAGCGCTGTTTCCGTGGCAACCATCGAATTTCTTCATCACTGTGTGATCCGAAGGATCCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ATCGACACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGATGTCTGCCGAATTATaGTTAACCTTCCAATGGACC +
Preference number: 5 (lower is better)
Translates to: IDTLKGLPLLLSYSYSDWMSAEL*LTFQWT
Trigger: GGTCCATTGGAAGGTTAACAATAATTCGGCAGACAT...CCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGTGTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp CTGAAAACACAGGATAAATTCTTGCTTCCTACTTACCACATCGAGTTTAAGGATACGCCTGCCAGGCTCTaGATGTCCAAGGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LKTQDKFLLPTYHIEFKDTPARL*MSKAPP
Trigger: GGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGT...ATCCTTAAACTCGATGTGGTAAGTAGGAAGCAAGAATTTATCCTGTGTTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACGATCTGCTCCAGGGCTaGGCGTGTTGGCAAAGTGTC +
Preference number: 5 (lower is better)
Translates to: NPSHRTNEIKVSILLPENDLLQG*ACWQSV
Trigger: GACACTTTGCCAACACGCCAAGCCCTGGAGCAGATC...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp CCTGGTACTCAGGATCAAAGAAGTCCTGAAATCAACAAGTGGGTAAGGGCTCAGTGCTTCTTTCAGACATaGCTGTCTCATTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PGTQDQRSPEINKWVRAQCFFQT*LSHLAG
Trigger: CCCTGCCAAATGAGACAGCAATGTCTGAAAGAAGCA...CTGAGCCCTTACCCACTTGTTGATTTCAGGACTTCTTTGATCCTGAGTACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS TCA 90 bp CTGCTTGGGACTCCAAAACATTGTTTTCTGACCCATTGCTTCGGTTaGTCATCCTCCACATCTGGGAATACATGCTGTCTCTCTCGAAAG +
Preference number: 5 (lower is better)
Translates to: LLGTPKHCFLTHCFG*SSSTSGNTCCLSRK
Trigger: CTTTCGAGAGAGACAGCATGTATTCCCAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGAAAACAATGTTTTGGAGTCCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 90 bp CAATTGACGAGGTGGAAAACTGTTTATGGGGGCTGTCGTCATCTGTaGACAAGCTATTTACACGTCTATGGAGGTGCTCCAGGTCAATTT +
Preference number: 5 (lower is better)
Translates to: QLTRWKTVYGGCRHL*TSYLHVYGGAPGQF
Trigger: AAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 90 bp ACATTGTTTTCTGACCCATTGCTTCGGTTGATCATCCTCCACATCTaGGAATACATGCTGTCTCTCTCGAAAGGATTCAGCCCCTTCATG +
Preference number: 5 (lower is better)
Translates to: TLFSDPLLRLIILHI*EYMLSLSKGFSPFM
Trigger: CATGAAGGGGCTGAATCCTTTCGAGAGAGACAGCATGTATTCCCAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGAAAACAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGAGTTGTTTTCCACCTTTaGAAGGGCAACATCCATTCC +
Preference number: 5 (lower is better)
Translates to: ITSMLVPHYSCSFGGVLGVVFHL*KGNIHS
Trigger: GGAATGGATGTTGCCCTTCAAAAGGTGGAAAACAAC...TCCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ACTTTGAAGGGGCTTCCCCTCCTCCTCAGCTACAGTTACAGTGATTGGCTTGCAATTTCAAAGTGGACATaGGGGTTACCTCCATTTTCT +
Preference number: 5 (lower is better)
Translates to: TLKGLPLLLSYSYSDWLAISKWT*GLPPFS
Trigger: AGAAAATGGAGGTAACCCCAATGTCCACTTTGAAAT...TGCAAGCCAATCACTGTAACTGTAGCTGAGGAGGAGGGGAAGCCCCTTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTTCGGGTTGCCAGAGTaGTGTATGGGACTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: NPSHRTNEIKVSILLPENFGLPE*CMGLPH
Trigger: GTGGGGAAGTCCCATACACAACTCTGGCAACCCGAA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGATTGTTTTCTGACCCATaGCTTCGGTTGATCATCCTC +
Preference number: 5 (lower is better)
Translates to: ITSMLVPHYSCSFGGVLGLFSDP*LRLIIL
Trigger: GAGGATGATCAACCGAAGCAATGGGTCAGAAAACAA...TCCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp CATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGTGGGACTCCAAAACATaGTTTTCTGACCCATTGCTT +
Preference number: 5 (lower is better)
Translates to: HHIHVSPTLQLLLWGSPRWDSKT*FSDPLL
Trigger: AAGCAATGGGTCAGAAAACAATGTTTTGGAGTCCCA...CCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp CATCACATCCATGTTAGTCCCACATTACAGTTGCTCCTTTGGGGGAGTCCTAGGCTTTTGAATGCCTGCTaGGGACTCCAAAACATTGTT +
Preference number: 5 (lower is better)
Translates to: HHIHVSPTLQLLLWGSPRLLNAC*GLQNIV
Trigger: AACAATGTTTTGGAGTCCCAAGCAGGCATTCAAAAG...CCTAGGACTCCCCCAAAGGAGCAACTGTAATGTGGGACTAACATGGATGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGCTCCTCCCTTCTGCTTaGCATCCACTGAGGAGTACA +
Preference number: 5 (lower is better)
Translates to: TSDILESVSISMLKPDIQLLPSA*HPLRST
Trigger: TGTACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAG...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp ACCTCTGACATTCTGGAAAGCGTTAGCATTTCCATGTTGAAACCAGATATCCAGACATTGCTGTCTCATTaGGCAGGGCTGGAGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TSDILESVSISMLKPDIQTLLSH*AGLEPL
Trigger: AAGAGGCTCCAGCCCTGCCAAATGAGACAGCAATGT...CTGGATATCTGGTTTCAACATGGAAATGCTAACGCTTTCCAGAATGTCAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS-3UTR CAA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACGGCCACCATTTGTGCTaGAGAATGTCCATGTCGCCA +
Preference number: 5 (lower is better)
Translates to: NPSHRTNEIKVSILLPENGHHLC*RMSMSP
Trigger: TGGCGACATGGACATTCTCAAGCACAAATGGTGGCC...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 90 bp TCACACAGTGATGAAGAAATTCGATGGTTGCCACGGAAACAGCGCTaGCTTATATTCTGGGGGACTGGAAATGTCTGCCGAATTATTGTT +
Preference number: 5 (lower is better)
Translates to: SHSDEEIRWLPRKQR*LIFWGTGNVCRIIV
Trigger: AACAATAATTCGGCAGACATTTCCAGTCCCCCAGAATATAAGTCAGCGCTGTTTCCGTGGCAACCATCGAATTTCTTCATCACTGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp GAAGTAGAGCGGGGAGAGAAAGAACTAGAATTGTTACTAATTATCCTGATTTCTCTCCTCCCTTCTGCTTaGCATCCACTGAGGAGTACA +
Preference number: 5 (lower is better)
Translates to: EVERGEKELELLLIILISLLPSA*HPLRST
Trigger: TGTACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAG...AGAAATCAGGATAATTAGTAACAATTCTAGTTCTTTCTCTCCCCGCTCTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTCCATATTTTACCTTTaGAATGCCTGCTTGGGACTC +
Preference number: 5 (lower is better)
Translates to: NPSHRTNEIKVSILLPENSIFYL*NACLGL
Trigger: GAGTCCCAAGCAGGCATTCAAAAGGTAAAATATGGA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp AATCCTAGCCACAGAACGAATGAGATTAAAGTAAGCATACTGCTGCCTGAAAACTTGTTCTCCAGTTTTTaGTCTGTCAGTGATCCATTC +
Preference number: 5 (lower is better)
Translates to: NPSHRTNEIKVSILLPENLFSSF*SVSDPF
Trigger: GAATGGATCACTGACAGACAAAAAACTGGAGAACAA...GTTTTCAGGCAGCAGTATGCTTACTTTAATCTCATTCGTTCTGTGGCTAGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS-3UTR CAA 90 bp GCTGAAGATGGAGAAAGACTGAAGTTATTGCAATTAGAGTTTCAAAACAGAGGAAAGTTCACATGCTTCTaGAACAGCTTGAAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: AEDGERLKLLQLEFQNRGKFTCF*NSLKRV
Trigger: AACCCTTTTCAAGCTGTTCAAGAAGCATGTGAACTT...TCCTCTGTTTTGAAACTCTAATTGCAATAACTTCAGTCTTTCTCCATCTTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp CCTTCCTCCGGCTCCACCACGTCTCGAGGACAGCTATaGGGCAGGAGAGCACAATTCCCGCGGCCAGGATGC +
Preference number: 6 (lower is better)
Translates to: PSSGSTTSRGQL*GRRAQFPRPGC
Trigger: GCATCCTGGCCGCGGGAATTGTGCTCTCCTGCCTCATAGCTGTCCTCGAGACGTGGTGGAGCCGGAGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS CCA 72 bp TGCTGTCTCATTTGGCAGGGCTGGAGCCTCTTTCGATaGGACCCGGGAGCCCTTCCTCCGGCTCCACCACGT +
Preference number: 6 (lower is better)
Translates to: CCLIWQGWSLFR*DPGALPPAPPR
Trigger: ACGTGGTGGAGCCGGAGGAAGGGCTCCCGGGTCCCATCGAAAGAGGCTCCAGCCCTGCCAAATGAGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS CAA 72 bp CCCGCGGCCAGGATGCAGAACACGCCTGCCAGGCTCTaGATGTCCAAGGCTCCTCCCTTCTGCTTTGCATCC +
Preference number: 6 (lower is better)
Translates to: PAARMQNTPARL*MSKAPPFCFAS
Trigger: GGATGCAAAGCAGAAGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGTGTTCTGCATCCTGGCCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS TCA 72 bp CCGCGGCCAGGATGCAGAACACGCCTGCCAGGCTCTTaGTGTCCAAGGCTCCTCCCTTCTGCTTTGCATCCA +
Preference number: 6 (lower is better)
Translates to: PRPGCRTRLPGS*CPRLLPSALHP
Trigger: TGGATGCAAAGCAGAAGGGAGGAGCCTTGGACATCAAGAGCCTGGCAGGCGTGTTCTGCATCCTGGCCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS TCA 72 bp GGTGAGGCCACAGCCACTTCTTGGGGTCCCAGCTGTTaGGCGCTGAATGAAGAGGTGGGGGATATGCATGGC +
Preference number: 6 (lower is better)
Translates to: GEATATSWGPSC*ALNEEVGDMHG
Trigger: GCCATGCATATCCCCCACCTCTTCATTCAGCGCTCAACAGCTGGGACCCCAAGAAGTGGCTGTGGCCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp CCATTAGGAGCCCTGTGCCTAAAAGGGCCAGTTCGGTaGTCAGGCACACTGCCGAAAGCGAAGCCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PLGALCLKGPVR*SGTLPKAKPEA
Trigger: TGCCTCTGGCTTCGCTTTCGGCAGTGTGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCTCCTAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp GATGTCCAAGGCTCCTCCCTTCTGCTTTGCATCCACTaGGGAGTACAGGTCACACTGGCCGTTCTTAGGCCA +
Preference number: 6 (lower is better)
Translates to: DVQGSSLLLCIH*GVQVTLAVLRP
Trigger: TGGCCTAAGAACGGCCAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAGAAGGGAGGAGCCTTGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS CCA 72 bp AAGAGGTGGGGGATATGCATGGCATCTGCCAAAGACTaGAGGGACCCAGCTGATGTGCAACCAATGGAGCTG +
Preference number: 6 (lower is better)
Translates to: KRWGICMASAKD*RDPADVQPMEL
Trigger: CAGCTCCATTGGTTGCACATCAGCTGGGTCCCTCCAGTCTTTGGCAGATGCCATGCATATCCCCCACCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp ATGGTCTCCAGCATGGACCGCCCTCCTTGCCAGGGCTaGGAGTTTTTCCTGATACAGGACAAGCTTGCCATG +
Preference number: 6 (lower is better)
Translates to: MVSSMDRPPCQG*EFFLIQDKLAM
Trigger: CATGGCAAGCTTGTCCTGTATCAGGAAAAACTCCAAGCCCTGGCAAGGAGGGCGGTCCATGCTGGAGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp AGGTCACACTGGCCGTTCTTAGGCCACCATTTGTGCTaGAGAATGTCCATGTCGCCACTCTGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RSHWPFLGHHLC*RMSMSPLCCSS
Trigger: GGAGCTGCAGCAGAGTGGCGACATGGACATTCTCAAGCACAAATGGTGGCCTAAGAACGGCCAGTGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp TACAGGTCACACTGGCCGTTCTTAGGCCACCATTTGTaGTTGAGAATGTCCATGTCGCCACTCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: YRSHWPFLGHHL*LRMSMSPLCCS
Trigger: GCTGCAGCAGAGTGGCGACATGGACATTCTCAAGCACAAATGGTGGCCTAAGAACGGCCAGTGTGACCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp ACCACCAAGCCCCCATCATCATTCGGGTTGCCAGAGTaGTGTATGGGACTTCCCCACCTTGCTGTACAAAGG +
Preference number: 6 (lower is better)
Translates to: TTKPPSSFGLPE*CMGLPHLAVQR
Trigger: CCTTTGTACAGCAAGGTGGGGAAGTCCCATACACAACTCTGGCAACCCGAATGATGATGGGGGCTTGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp GAGTACAGGTCACACTGGCCGTTCTTAGGCCACCATTaGTGCTTGAGAATGTCCATGTCGCCACTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: EYRSHWPFLGHH*CLRMSMSPLCC
Trigger: GCAGCAGAGTGGCGACATGGACATTCTCAAGCACAAATGGTGGCCTAAGAACGGCCAGTGTGACCTGTACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp CTGAAAGAGTATAGTCATCATTTCTGTTGCTCCGGGTaGGGCCACAGCCACTTCTTGGGGTCCCAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LKEYSHHFCCSG*GHSHFLGSQLL
Trigger: CAACAGCTGGGACCCCAAGAAGTGGCTGTGGCCTCACCCGGAGCAACAGAAATGATGACTATACTCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp AGACCAAGAGTCCCACAAGAAGCACTGTGCCAGCAATaGAGGCCCACAGAGATAGATCAAATGGTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: RPRVPQEALCQQ*RPTEIDQMVQG
Trigger: GCCTTGCACCATTTGATCTATCTCTGTGGGCCTGCATTGCTGGCACAGTGCTTCTTGTGGGACTCTTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp AGCCCCCATCATCATTCGGGTTGCCAGAGTTGTGTATaGGACTTCCCCACCTTGCTGTACAAAGGACCCATA +
Preference number: 6 (lower is better)
Translates to: SPHHHSGCQSCV*DFPTLLYKGPI
Trigger: TATGGGTCCTTTGTACAGCAAGGTGGGGAAGTCCCATACACAACTCTGGCAACCCGAATGATGATGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp TATGGGTCATCAAGAGGCCTTCCTAGTTGTGCAGAGTaGTGCAGGTCATGGCTGGATGCCTGGTTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: YGSSRGLPSCAE*CRSWLDAWFFQ
Trigger: CTGGAAAAACCAGGCATCCAGCCATGACCTGCACCACTCTGCACAACTAGGAAGGCCTCTTGATGACCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS CAA 72 bp GAGCAAATAACCACCAAGCCCCCATCATCATTCGGGTaGCCAGAGTTGTGTATGGGACTTCCCCACCTTGCT +
Preference number: 6 (lower is better)
Translates to: EQITTKPPSSFG*PELCMGLPHLA
Trigger: AGCAAGGTGGGGAAGTCCCATACACAACTCTGGCAACCCGAATGATGATGGGGGCTTGGTGGTTATTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 90 bp GAGCAAATAACCACCAAGCCCCCATCATCATTCGGGTTGCCAGAGTaGTGTATGGGACTTCCCCACCTTGCTGTACAAAGGACCCATACA +
Preference number: 6 (lower is better)
Translates to: EQITTKPPSSFGLPE*CMGLPHLAVQRTHT
Trigger: TGTATGGGTCCTTTGTACAGCAAGGTGGGGAAGTCCCATACACAACTCTGGCAACCCGAATGATGATGGGGGCTTGGTGGTTATTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 90 bp CAGCTATTACCGCCAAGCTTCAAACACGGCCTTAATGGCCAAGCATaGCTTCTTTCAGACATTGCTGTCTCATTTGGCAGGGCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: QLLPPSFKHGLNGQA*LLSDIAVSFGRAGA
Trigger: GGCTCCAGCCCTGCCAAATGAGACAGCAATGTCTGAAAGAAGCAATGCTTGGCCATTAAGGCCGTGTTTGAAGCTTGGCGGTAATAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210324.2
CDS GCA 72 bp ACATGCTGTCTCTCTCGAAAGGATTCAGCCCCTTCATaGGGACATGCTGATATACTGCCGAGTCCAAGACTG +
Preference number: 6 (lower is better)
Translates to: TCCLSRKDSAPS*GHADILPSPRL
Trigger: CAGTCTTGGACTCGGCAGTATATCAGCATGTCCGCATGAAGGGGCTGAATCCTTTCGAGAGAGACAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp GTGAGTGTTTCTGAAATCACTGATCTGCTCCAGGGCTaGGCGTGTTGGCAAAGTGTCAATGTCCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: VSVSEITDLLQG*ACWQSVNVQRG
Trigger: ACCCCTCTGGACATTGACACTTTGCCAACACGCCAAGCCCTGGAGCAGATCAGTGATTTCAGAAACACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 90 bp GGTGGTGATGTGAGTGTTTCTGAAATCACTGATCTGCTCCAGGGCTaGGCGTGTTGGCAAAGTGTCAATGTCCAGAGGGGTCAAGTCAAT +
Preference number: 6 (lower is better)
Translates to: GGDVSVSEITDLLQG*ACWQSVNVQRGQVN
Trigger: ATTGACTTGACCCCTCTGGACATTGACACTTTGCCAACACGCCAAGCCCTGGAGCAGATCAGTGATTTCAGAAACACTCACATCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp AGGATTCAGCCCCTTCATGCGGACATGCTGATATACTaGCGAGTCCAAGACTGTGCCATAAGGGATATCTGT +
Preference number: 6 (lower is better)
Translates to: RIQPLHADMLIY*RVQDCAIRDIC
Trigger: ACAGATATCCCTTATGGCACAGTCTTGGACTCGGCAGTATATCAGCATGTCCGCATGAAGGGGCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp CATTTGTGCTTGAGAATGTCCATGTCGCCACTCTGCTaGAGCTCCAGGATCCTTTGTGAAAAGACATCACGG +
Preference number: 6 (lower is better)
Translates to: HLCLRMSMSPLC*SSRILCEKTSR
Trigger: CCGTGATGTCTTTTCACAAAGGATCCTGGAGCTGCAGCAGAGTGGCGACATGGACATTCTCAAGCACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp TTCTGCTTTGCATCCACTGAGGAGTACAGGTCACACTaGCCGTTCTTAGGCCACCATTTGTGCTTGAGAATG +
Preference number: 6 (lower is better)
Translates to: FCFASTEEYRSH*PFLGHHLCLRM
Trigger: CATTCTCAAGCACAAATGGTGGCCTAAGAACGGCCAGTGTGACCTGTACTCCTCAGTGGATGCAAAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095852.5
ENSMUST00000210324.2
CDS TCA 72 bp GATGAAGAAATTCGATGGTTGCCACGGAAACAGCGCTaGCTTATATTCTGGGGGACTGGAAATGTCTGCCGA +
Preference number: 6 (lower is better)
Translates to: DEEIRWLPRKQR*LIFWGTGNVCR
Trigger: TCGGCAGACATTTCCAGTCCCCCAGAATATAAGTCAGCGCTGTTTCCGTGGCAACCATCGAATTTCTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp CCTTCGGATCACACAGTGATGAAGAAATTCGATGGTTaGCACGGAAACAGCGCTGACTTATATTCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: PSDHTVMKKFDG*HGNSADLYSGG
Trigger: TCCCCCAGAATATAAGTCAGCGCTGTTTCCGTGGCAACCATCGAATTTCTTCATCACTGTGTGATCCGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp AGGTGGAAAACTGTTTATGGGGGCTGTCGTCATCTGTaGACAAGCTATTTACACGTCTATGGAGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RWKTVYGGCRHL*TSYLHVYGGAP
Trigger: TGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp TCTGACCCATTGCTTCGGTTGATCATCCTCCACATCTaGGAATACATGCTGTCTCTCTCGAAAGGATTCAGC +
Preference number: 6 (lower is better)
Translates to: SDPLLRLIILHI*EYMLSLSKGFS
Trigger: GCTGAATCCTTTCGAGAGAGACAGCATGTATTCCCAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp ACCAGATTCGTCTCCACCACCTCACTTATGAAGGATTaGGCTGTGGCAGGATTCATGACAAGGATGGCTCTT +
Preference number: 6 (lower is better)
Translates to: TRFVSTTSLMKD*AVAGFMTRMAL
Trigger: AAGAGCCATCCTTGTCATGAATCCTGCCACAGCCAAATCCTTCATAAGTGAGGTGGTGGAGACGAATCTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp AAGTTCTCCTACCAGTCCATTCCATGTCCCATCCTCTaGTGGGCTTCCATATTTGTGGTCCGGTGCAACATA +
Preference number: 6 (lower is better)
Translates to: KFSYQSIPCPIL*WASIFVVRCNI
Trigger: TATGTTGCACCGGACCACAAATATGGAAGCCCACAAGAGGATGGGACATGGAATGGACTGGTAGGAGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 90 bp CCTGCTTGGGACTCCAAAACATTGTTTTCTGACCCATTGCTTCGGTaGATCATCCTCCACATCTGGGAATACATGCTGTCTCTCTCGAAA +
Preference number: 6 (lower is better)
Translates to: PAWDSKTLFSDPLLR*IILHIWEYMLSLSK
Trigger: TTTCGAGAGAGACAGCATGTATTCCCAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGAAAACAATGTTTTGGAGTCCCAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp TTCTCCTACCAGTCCATTCCATGTCCCATCCTCTTGTaGGCTTCCATATTTGTGGTCCGGTGCAACATAAAT +
Preference number: 6 (lower is better)
Translates to: FSYQSIPCPILL*ASIFVVRCNIN
Trigger: ATTTATGTTGCACCGGACCACAAATATGGAAGCCCACAAGAGGATGGGACATGGAATGGACTGGTAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CCA 72 bp CTGTCGTCATCTGTGCACAAGCTATTTACACGTCTATaGAGGTGCTCCAGGTCAATTTCCTTGTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LSSSVHKLFTRL*RCSRSISLSSS
Trigger: AGAGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp CCTGCTTGGGACTCCAAAACATTGTTTTCTGACCCATaGCTTCGGTTGATCATCCTCCACATCTGGGAATAC +
Preference number: 6 (lower is better)
Translates to: PAWDSKTLFSDP*LRLIILHIWEY
Trigger: GTATTCCCAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGAAAACAATGTTTTGGAGTCCCAAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp TTGAATGCCTGCTTGGGACTCCAAAACATTGTTTTCTaGCCCATTGCTTCGGTTGATCATCCTCCACATCTG +
Preference number: 6 (lower is better)
Translates to: LNACLGLQNIVF*PIASVDHPPHL
Trigger: CAGATGTGGAGGATGATCAACCGAAGCAATGGGTCAGAAAACAATGTTTTGGAGTCCCAAGCAGGCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp TCCACATCATTTATTTCCTCATTAATGATGATCCAGTaGCAGTCAAAAGCAACCAGATTCGTCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: STSFISSLMMIQ*QSKATRFVSTT
Trigger: GGTGGTGGAGACGAATCTGGTTGCTTTTGACTGTCACTGGATCATCATTAATGAGGAAATAAATGATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS GCA 72 bp CCCATCCTCTTGTGGGCTTCCATATTTGTGGTCCGGTaGAACATAAATTTCATAATTAAAACCCAGGTAGTT +
Preference number: 6 (lower is better)
Translates to: PILLWASIFVVR*NINFIIKTQVV
Trigger: AACTACCTGGGTTTTAATTATGAAATTTATGTTGCACCGGACCACAAATATGGAAGCCCACAAGAGGATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 72 bp TGTGGTGATCATTTTGTTGATGTTGTTTTCCACCTTTaGAAGGGCAACATCCATTCCCTGCTGGGATACTTT +
Preference number: 6 (lower is better)
Translates to: CGDHFVDVVFHL*KGNIHSLLGYF
Trigger: AAAGTATCCCAGCAGGGAATGGATGTTGCCCTTCAAAAGGTGGAAAACAACATCAACAAAATGATCACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS CAA 90 bp GTCAAAGAGTGTGGTGATCATTTTGTTGATGTTGTTTTCCACCTTTaGAAGGGCAACATCCATTCCCTGCTGGGATACTTTGTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: VKECGDHFVDVVFHL*KGNIHSLLGYFVQK
Trigger: TTTTTGGACAAAGTATCCCAGCAGGGAATGGATGTTGCCCTTCAAAAGGTGGAAAACAACATCAACAAAATGATCACCACACTCTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5
CDS TCA 72 bp ATTGTTAACCTTCCAATGGACCTTCTGACAAGTTCCTaGACATCCACATCATTTATTTCCTCATTAATGATG +
Preference number: 6 (lower is better)
Translates to: IVNLPMDLLTSS*TSTSFISSLMM
Trigger: CATCATTAATGAGGAAATAAATGATGTGGATGTTCAGGAACTTGTCAGAAGGTCCATTGGAAGGTTAACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095852.5