RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRID1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041078

Ensembl transcript IDs: ENSMUST00000043349.7

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGCTGTGTTGTCATTTTCTTGTATTAAAAAGCTCTGCTGGTCGG +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVCVCVW*LCCHFLVLKSSAGR
Trigger: CCGACCAGCAGAGCTTTTTAATACAAGAAAATGACAACACAGTCACCACACACACACACACACACACACACACACACACACACACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR GCA 90 bp CTCTCTGTGTCTGTAACCACACTTTCTCTCACTCAGAGCTGTGGATaGCAATTCAAGCAAATAATCTTTACCTGGTTTCACACCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LSVSVTTLSLTQSCG*QFKQIIFTWFHTPP
Trigger: TGGAGGGGTGTGAAACCAGGTAAAGATTATTTGCTTGAATTGGCATCCACAGCTCTGAGTGAGAGAAAGTGTGGTTACAGACACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 90 bp TCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACTCAGAGCTGTaGATGCCAATTCAAGCAAATAATCTTTACCTGGTTTCACACCCC +
Preference number: 1 (lower is better)
Translates to: STLCVCNHTFSHSEL*MPIQANNLYLVSHP
Trigger: GGGGTGTGAAACCAGGTAAAGATTATTTGCTTGAATTGGCATCCACAGCTCTGAGTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 90 bp TCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATaGATCCTTAGGTTAGCCTTGTTTTATGAAACAGGACTTCCGGGC +
Preference number: 1 (lower is better)
Translates to: SFPVLQFSYPTKGNI*ILRLALFYETGLPG
Trigger: GCCCGGAAGTCCTGTTTCATAAAACAAGGCTAACCTAAGGATCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 90 bp CACACACATACACACACACACACACACACACACAGTCTCTTACTCTaGACCAAAGACATCCATATCCATGATATACCAAAGAAACTAAGT +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHSLLL*TKDIHIHDIPKKLS
Trigger: ACTTAGTTTCTTTGGTATATCATGGATATGGATGTCTTTGGTTCAGAGTAAGAGACTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 90 bp AAGGTAACATACCTACAAACACCCTCTTCATCTGGTGCTTTTAGCTaGTTGTGTGATATAGCCACTCTTTCATCCTCACTAACATCATTA +
Preference number: 1 (lower is better)
Translates to: KVTYLQTPSSSGAFS*LCDIATLSSSLTSL
Trigger: TAATGATGTTAGTGAGGATGAAAGAGTGGCTATATCACACAATCAGCTAAAAGCACCAGATGAAGAGGGTGTTTGTAGGTATGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 90 bp ACACACACACAGTCTCTTACTCTGAACCAAAGACATCCATATCCATaGTATACCAAAGAAACTAAGTCATCTTTGGGATATAGACAGGTG +
Preference number: 1 (lower is better)
Translates to: THTQSLTLNQRHPYP*YTKETKSSLGYRQV
Trigger: CACCTGTCTATATCCCAAAGATGACTTAGTTTCTTTGGTATATCATGGATATGGATGTCTTTGGTTCAGAGTAAGAGACTGTGTGTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR TCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCCTACCCAAGGACACTaGAGGAGGAATGAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQPTQGH*RRNEGL
Trigger: AAGCCCCTCATTCCTCCTTCAGTGTCCTTGGGTAGG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR GCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTGTATTAAAAAGCTCTaGTGGTCGGGTGGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGCIKKL*WSGGWV
Trigger: CACCCACCCACCCGACCAGCAGAGCTTTTTAATACA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCGCTGTTCAAACACATTaGTATCAAAGCCTCAGAGAT +
Preference number: 2 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGAVQTH*YQSLRD
Trigger: ATCTCTGAGGCTTTGATACCAATGTGTTTGAACAGC...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR TCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATTATGGGCATCTTTTCTaGGGCCCTGGGGACAATTGC +
Preference number: 2 (lower is better)
Translates to: WKESGYGCCLPLENLLEYYGHLF*GPGDNC
Trigger: GCAATTGTCCCCAGGGCCTCAGAAAAGATGCCCATA...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR TCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGTTAGCCTTGTTTTATaGAACAGGACTTCCGGGCAA +
Preference number: 2 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTVSLVL*NRTSGQ
Trigger: TTGCCCGGAAGTCCTGTTTCATAAAACAAGGCTAAC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTTGGGCCCACCCAACATaGGCTCCAGACTCAGACACA +
Preference number: 2 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPWAHPT*APDSDT
Trigger: TGTGTCTGAGTCTGGAGCCCATGTTGGGTGGGCCCA...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATAGCTCAGGGAACAGATaGGCCCACCCAACATGGGCT +
Preference number: 2 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYSSGNR*AHPTWA
Trigger: AGCCCATGTTGGGTGGGCCCATCTGTTCCCTGAGCT...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR GCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGGCAGACGAGTCTTTTaGTTCAAACATTACACAGCT +
Preference number: 2 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTGRRVF*FKHYTA
Trigger: AGCTGTGTAATGTTTGAAGCAAAAGACTCGTCTGCC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CAA 90 bp AGCTGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTaGCTTGAATATCAATCATTTCCCCTCATACCAAGGGTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SWKESGYGCCLPLEN*LEYQSFPLIPRVGK
Trigger: TTTCCCTACCCTTGGTATGAGGGGAAATGATTGATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR GCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGGCCCTGGGGACAATTaGATGCTACACACTGTGACA +
Preference number: 2 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYGPGDN*MLHTVT
Trigger: TGTCACAGTGTGTAGCATGCAATTGTCCCCAGGGCC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACACATCTAGAGACACTTTaGATTTTCAAAAGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTHLETL*IFKSGG
Trigger: CCCTCCACTTTTGAAAATCCAAAGTGTCTCTAGATG...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR TCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATACACTGAAGGAGGAATaGGGGGCTTGTAAGACAAGG +
Preference number: 2 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYTLKEE*GACKTR
Trigger: CCTTGTCTTACAAGCCCCTCATTCCTCCTTCAGTGT...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAAACAGGGGGCTCCTTTaGCACTTCAGAATGATCACA +
Preference number: 2 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRNRGLL*HFRMIT
Trigger: TGTGATCATTCTGAAGTGCCAAAGGAGCCCCCTGTT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTATTGTGACCTCAATATaGGCATCTTTTCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPIVTSI*ASFLRP
Trigger: GGGCCTCAGAAAAGATGCCCATATTGAGGTCACAAT...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR TCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTGTGTGTGTGTGTGGTaGCTGTGTTGTCATTTTCTT +
Preference number: 2 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYCVCVW*LCCHFL
Trigger: AAGAAAATGACAACACAGTCACCACACACACACACA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAAGCTTGAAGGATTCCTaGTGTGGTCTGGTTCATTTA +
Preference number: 2 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGSLKDS*CGLVHL
Trigger: TAAATGAACCAGACCACAGCAGGAATCCTTCAAGCT...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CAA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATGAGCCCACCCAGGCTTaGCCATGTACACCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: WKESGYGCCLPLENLLEYEPTQA*PCTPVS
Trigger: GGAGACAGGTGTACATGGCAAAGCCTGGGTGGGCTC...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp ATTGTGACCTCAATATGGGCATCTTTTCTGAGGCCCTaGGGACAATTGCATGCTACACACTGTGACACACAG +
Preference number: 3 (lower is better)
Translates to: IVTSIWASFLRP*GQLHATHCDTQ
Trigger: CTGTGTGTCACAGTGTGTAGCATGCAATTGTCCCCAGGGCCTCAGAAAAGATGCCCATATTGAGGTCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp GATGTCCCACCCAGGCCAGTCAGACCTCTAACTAGATaGGGTCTGCCCTTCTTTTATATAGTCTCTTCTAAT +
Preference number: 3 (lower is better)
Translates to: DVPPRPVRPLTR*GLPFFYIVSSN
Trigger: ATTAGAAGAGACTATATAAAAGAAGGGCAGACCCCATCTAGTTAGAGGTCTGACTGGCCTGGGTGGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp GTGATTGGGGTTGAGTCCCATACCCTTGAAGCTGGATaGGGTCATATTCTACATCCTAACAATGTAGGCATC +
Preference number: 3 (lower is better)
Translates to: VIGVESHTLEAG*GHILHPNNVGI
Trigger: GATGCCTACATTGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCCCAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAAGGCCCTGGGGACAATaGCATGCTACACACTGTGAC +
Preference number: 3 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRRPWGQ*HATHCD
Trigger: GTCACAGTGTGTAGCATGCAATTGTCCCCAGGGCCT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 72 bp TGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTaGATATCAATCATTTCCCCTCATACCAAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: WLWLLSPPRELA*ISIISPHTKGR
Trigger: CCTACCCTTGGTATGAGGGGAAATGATTGATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CAA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGAACAGGGGGCTCCTTaGGCACTTCAGAATGATCAC +
Preference number: 3 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYEQGAP*ALQNDH
Trigger: GTGATCATTCTGAAGTGCCAAAGGAGCCCCCTGTTC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 72 bp CCTGTCTCCAAGCTCTACACACTAACTGGAGAAATGTaGACAGGTCTCTTTAGTAATACTAGCAGCATGGCA +
Preference number: 3 (lower is better)
Translates to: PVSKLYTLTGEM*TGLFSNTSSMA
Trigger: TGCCATGCTGCTAGTATTACTAAAGAGACCTGTTCACATTTCTCCAGTTAGTGTGTAGAGCTTGGAGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp GCCACTCTTTCATCCTCACTAACATCATTATGGATTTaGGGAGGTAAATTCATCTTGGGCCAGTTTTCACCC +
Preference number: 3 (lower is better)
Translates to: ATLSSSLTSLWI*GGKFILGQFSP
Trigger: GGGTGAAAACTGGCCCAAGATGAATTTACCTCCCCAAATCCATAATGATGTTAGTGAGGATGAAAGAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGCTGTGTTGTCATTTTCTTGTATTAAAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVCVW*LCCHFLVLKSS
Trigger: AGAGCTTTTTAATACAAGAAAATGACAACACAGTCACCACACACACACACACACACACACACACACACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR GCA 72 bp TCTTCTCTATGTAGTCCCTCTTGTTTATCCTCAGTCTaGCCATCATGTGGAGACACTTCTATCAACACTTTT +
Preference number: 3 (lower is better)
Translates to: SSLCSPSCLSSV*PSCGDTSINTF
Trigger: AAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAAGAGGGACTACATAGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp TGTGTCTGTAACCACACTTTCTCTCACTCAGAGCTGTaGATGCCAATTCAAGCAAATAATCTTTACCTGGTT +
Preference number: 3 (lower is better)
Translates to: CVCNHTFSHSEL*MPIQANNLYLV
Trigger: AACCAGGTAAAGATTATTTGCTTGAATTGGCATCCACAGCTCTGAGTGAGAGAAAGTGTGGTTACAGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR-3UTR CAA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGATGCTGTTCAAACACATaGGTATCAAAGCCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGCCSNT*VSKPQR
Trigger: TCTCTGAGGCTTTGATACCAATGTGTTTGAACAGCA...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp GTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATaGATCCTTAGGTTAGCCTTGTTTTATGAAACAGGA +
Preference number: 3 (lower is better)
Translates to: VLQFSYPTKGNI*ILRLALFYETG
Trigger: TCCTGTTTCATAAAACAAGGCTAACCTAAGGATCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 72 bp ACCCTCATGGTAATATATCTCTCAACTAACTCTATATaGATACAGATAGAAGCAGCAACTGATAGGACTTCA +
Preference number: 3 (lower is better)
Translates to: TLMVIYLSTNSI*IQIEAATDRTS
Trigger: TGAAGTCCTATCAGTTGCTGCTTCTATCTGTATTCATATAGAGTTAGTTGAGAGATATATTACCATGAGGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR TCA 72 bp CAGTCTCTTACTCTGAACCAAAGACATCCATATCCATaGTATACCAAAGAAACTAAGTCATCTTTGGGATAT +
Preference number: 3 (lower is better)
Translates to: QSLTLNQRHPYP*YTKETKSSLGY
Trigger: ATATCCCAAAGATGACTTAGTTTCTTTGGTATATCATGGATATGGATGTCTTTGGTTCAGAGTAAGAGACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CCA 72 bp TTTTTAAAAGACCAACAATATGCTGTTCAAACACATTaGTATCAAAGCCTCAGAGATTGTGACCTCAATATG +
Preference number: 3 (lower is better)
Translates to: FLKDQQYAVQTH*YQSLRDCDLNM
Trigger: CATATTGAGGTCACAATCTCTGAGGCTTTGATACCAATGTGTTTGAACAGCATATTGTTGGTCTTTTAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCGCGCCCCCTGTGGGCTaGGCAGTAGAATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGAPPVG*AVEWHG
Trigger: GCCGTGCCATTCTACTGCTCAGCCCACAGGGGGCGC...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTGGCACCGATGTGGATaGTGGAGTCGGCCCGCACCG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGWHRCG*WSRPAP
Trigger: CGGTGCGGGCCGACTCCATCATCCACATCGGTGCCA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGCTGCTCAGTGGCAGTaGCAGGTTGCTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGAAQWQ*QVAAGP
Trigger: GGGCCCAGCAGCAACCTGCCACTGCCACTGAGCAGC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCCAGGGCATTGGCGGATaGACAGCCCGTGGATGTGAC +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGQGIGG*TARGCD
Trigger: GTCACATCCACGGGCTGTGCATCCGCCAATGCCCTG...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTGTGCATGGCGTCTGTaGGGGACTGCAGGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGCAWRL*GTAGHW
Trigger: CCAATGCCCTGCAGTCCCTCACAGACGCCATGCACA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGCCACCACTTCTGCTTaGGCACATCCAGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGATTSA*AHPGPL
Trigger: CAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGACGACAGTGTCCGGCTaGTGCCATGGCTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGTTVSG*CHGCSA
Trigger: AGCAGAGCAGCCATGGCACCAGCCGGACACTGTCGT...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCGCCTCTCCTGTAGACTaGCATTCAAGCCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGASPVD*HSSPSP
Trigger: CGGAGAAGGGCTTGAATGGCAGTCTACAGGAGAGGC...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCAGCTGCCCATCACGATaGGCATGGCCACAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGSCPSR*AWPQSS
Trigger: TGAACTCTGTGGCCATGCGCATCGTGATGGGCAGCT...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCCAGCCCCTCCATTCTTaGTTATGGTCCGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGQPLHS*LWSARA
Trigger: AGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTG...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGAGGTCCCCTGTGTCTTaGAGCTCCAGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGRSPVS*SSRILW
Trigger: CCAGAGGATCCTGGAGCTGCAAGACACAGGGGACCT...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCTCTTCCAGCTTCCTGTaGAAGGCGTTGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGSSSFL*KALASI
Trigger: GATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGA...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCCCAGCCTTGAGGCCTaGTCCAGGAAGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQPSLEA*SRKLWS
Trigger: GCTCCAAAGCTTCCTGGATCAGGCCTCAAGGCTGGG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCACCACAGGAATGGCTaGGGCAATGCAGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQHHRNG*GNAGPH
Trigger: GTGTGGGCCTGCATTGCCGCAGCCATTCCTGTGGTG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGAGGTAGCCTTCCTGTaGATCACAGAGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGEVAFL*ITEQGG
Trigger: TCCTCCCTGCTCTGTGATCCACAGGAAGGCTACCTC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCAACATGACGAACTTCTaGCAGCGCAGTTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGNMTNF*QRSSVT
Trigger: GGTGACAGAACTGCGCTGGCAGAAGTTCGTCATGTT...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGAAACAGTCCCCCATTaGGCGACCTGTGTTTGCACT +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGETVPH*ATCVCT
Trigger: AGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTGCTTGGACAGGTCCTaGAATGTCCTTATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGCLDRS*NVLMGL
Trigger: CAACCCCATAAGGACATTTCAGGACCTGTCCAAGCA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGGCCGATGACAGTCACTaGGCAGTCGTCATCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQADDSH*AVVICQ
Trigger: CTGACAGATGACGACTGCTCAGTGACTGTCATCGGC...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGACCTGTGTTTGCACTaGATTGAGGGCATAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGDLCLH*IEGIVA
Trigger: AGCCACTATGCCCTCAATTCAGTGCAAACACAGGTC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGCAGTGGCAGGTTGCTaGTGGGCCCTGACGACAGTG +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTAVAGC*WALTTV
Trigger: CACTGTCGTCAGGGCCCAGCAGCAACCTGCCACTGC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACACCCCCGGGGTTGCGCTaGACAAAGAGGTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTPPGLR*TKRCGM
Trigger: CATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGG...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTTCACAAAGACCCAGTaGCTGTCCTTGGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGFTKTQ*LSLEAK
Trigger: CTTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCAACGCTCTCTCTCTCTaGGGTGATGGTAATAGCAGA +
Preference number: 4 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGNALSL*GDGNSR
Trigger: TCTGCTATTACCATCACCCCAGAGAGAGAGAGCGTT...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGCATAGACAATCCAAATaGCACTGTGCAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGHRQSK*HCAGWQ
Trigger: CTGCCACCCTGCACAGTGCCATTTGGATTGTCTATG...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCCATCACGATGCGCATaGCCACAGAGTTCACCGAAG +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQPSRCA*PQSSPK
Trigger: CTTCGGTGAACTCTGTGGCCATGCGCATCGTGATGG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCGCTGTCATAGAACATaGCGAACTTCTGCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQRCHRT*RTSASA
Trigger: TGCGCTGGCAGAAGTTCGTCATGTTCTATGACAGCG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTACCTTCTGAAGGATTaGACACACAGTTGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGYLLKD*THSCQP
Trigger: GGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACATTGGGGGTCTCCTGGTaGCACCGGTTGCTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTLGVSW*HRLLFH
Trigger: GTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAA...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGAAGCTCAATGGACGCTaGGGAAATTTGCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGKLNGR*GNLLVS
Trigger: GCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTT...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACACCTGTCGTCCTTGGCTaGGTTCTCCTCGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTPVVLG*VLLEDG
Trigger: GCCATCTTCGAGGAGAACGCAGCCAAGGACGACAGG...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACGTGAACCCCCGGGGTTaGGCTGGACAAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHVNPRG*AGQRGV
Trigger: CACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCAC...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACACACAGCCCGTGGATGTaGCCAAGGCCAAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTHSPWM*PRPKFP
Trigger: AGGGAATTTTGGCCTTGGTCACATCCACGGGCTGTG...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACTCATTGATGAAGGAGTaGGCCCCCTGTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHSLMKE*APCGLS
Trigger: GCTCAGCCCACAGGGGGCGCACTCCTTCATCAATGA...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACGAATGGCTGCGGCAATaGAGGCCCACACCGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHEWLRQ*RPTPQS
Trigger: ACTTTGCGGTGTGGGCCTGCATTGCCGCAGCCATTC...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACGTCATCTGTCAGGGCTaGATACTCCACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHVICQG*ILHHGH
Trigger: GTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGAC...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGGCCAATGGCCAAAATaGAGAAGACCCCAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTGQWPK*RRPQRS
Trigger: GCTTCGCTGGGGTCTTCTGCATTTTGGCCATTGGCC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATTGGCACTGTGCAGGGTaGCAGAAGCCGAGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYWHCAG*QKPRVV
Trigger: CACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCA...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACTCTTTGGGGGTCTCCTaGTGGCACCGGTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHSLGVS*WHRLLF
Trigger: GAACAGCAACCGGTGCCACCAGGAGACCCCCAAAGA...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACCCATGTAGCGCTTGCTaGAGTCCACAACGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHPCSAC*SPQRSL
Trigger: GAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGG...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAGTTGCTGCTGGGCCCTaGCGACAGTGTCCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRVAAGP*RQCPAG
Trigger: ACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAAC...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACAAGAGGTGTGGGATGTaGATGGCGTCTGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHKRCGM*MASVRD
Trigger: GTCCCTCACAGACGCCATGCACATCCCACACCTCTT...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACCGCACCGTAACGCACTaGCATATCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHRTVTH*HIQGRS
Trigger: GCTTCTTCCCTGGATATGCCAGTGCGTTACGGTGCG...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAGGGACTGCAGGGCATTaGCGGATGCACAGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRGTAGH*RMHSPW
Trigger: CCACGGGCTGTGCATCCGCCAATGCCCTGCAGTCCC...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACCCCAGTGGCTGTCCTTaGAAGCCAAGTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHPSGCP*KPSWSP
Trigger: TGGAGACCAACTTGGCTTCCAAGGACAGCCACTGGG...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGGAGGCGGCTGCCCATaGGCCTCTCCTGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYGGGCP*ASPVDC
Trigger: GCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCATCCAGCACATCTATaGAGAACCCTTTGTAACGCT +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQHPAHL*RTLCNA
Trigger: AGCGTTACAAAGGGTTCTCCATAGATGTGCTGGATG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTCGCCCACCACAGGAATaGCTGCGGCAATGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPRPPQE*LRQCRP
Trigger: GGGCCTGCATTGCCGCAGCCATTCCTGTGGTGGGCG...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGTCCGGCTGGTGCCATaGCTGCTCTGCTCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYVRLVP*LLCSGR
Trigger: TCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGAC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGGCTGGTGCCATGGCTaGTCTGCTCCGGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYGWCHG*SAPAER
Trigger: CCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAATTGAGACGGACAGGTaGTCTCGAAGCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTIETDR*SRSQCV
Trigger: TACACACTGGCTTCGAGACCACCTGTCCGTCTCAAT...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGCTGCCATCAGGGGCCTaGTATATCTCATATTTGAAT +
Preference number: 4 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQLPSGA*YISYLN
Trigger: ATTCAAATATGAGATATACCAGGCCCCTGATGGCAG...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAGTGGCAGGTTGCTGCTaGGCCCTGACGACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGVAGCC*ALTTVS
Trigger: GGACACTGTCGTCAGGGCCCAGCAGCAACCTGCCAC...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATCCTCCAGGCACGGGCTaGAAGGACATAGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYPPGTG*KDIGMG
Trigger: CCCCATCCCTATGTCCTTCCAGCCCGTGCCTGGAGG...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGGTGTCCAGAGCCTCTaGAAGGACGCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPGVQSL*KDASRH
Trigger: GTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGGATCTCGGGGTCACTaGTTTCCTCATTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTGSRGH*FPHSQR
Trigger: TCTTTGTGAATGAGGAAATCAGTGACCCCGAGATCC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATGTGTTATGGAGCTGGTaGCCATACCTGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYVLWSW*PYLPSG
Trigger: CCCTGATGGCAGGTATGGTCACCAGCTCCATAACAC...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACGATTCAACACGAATATaGGCACGCCCACCACAGGAA +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHDSTRI*ARPPQE
Trigger: TTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATC...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAGCGTCTGTGAGGGACTaGAGGGCATTGGCGGATGCA +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGASVRD*RALADA
Trigger: TGCATCCGCCAATGCCCTGCAGTCCCTCACAGACGC...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAGGACCACGGTCATCCTaGCAAGGGCACTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGGPRSS*QGHCGP
Trigger: TGGTCCACAGTGCCCTTGGCAGGATGACCGTGGTCC...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATATCCAAATGGCACTGTaGAGGGTGGCAGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYIQMAL*RVAEAE
Trigger: CTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGAT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACCAGAGTCCCGGACAGTaGCATAAGACATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHQSPGQ*HKTSPV
Trigger: AACTGGAGATGTCTTATGGCACTGTCCGGGACTCTG...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAGGTCCCTGTAGGGGCTaGCATGTTGCAGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGGPCRG*HVAGQS
Trigger: GGATTGCCCTGCAACATGGCAGCCCCTACAGGGACC...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGTGCCATGGCTGCTCTaGTCCGGCAGAAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPVPWLL*SGRKVL
Trigger: CAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCAC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACGTTGTCCTTTGCAGATaGGAAGATTTGCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHVVLCR*EDLPDH
Trigger: GTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAAC...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTTGAGAGTCAGTCCTTaGAGGCGGCTGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYLRVSP*RRLPMG
Trigger: GCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATTCTGGTACTCCCTCGTaGGCTCCAAAGCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYSGTPS*APKLGL
Trigger: CAAGCCAAGCTTTGGAGCCCACGAGGGAGTACCAGA...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGAGAGCTGGGTGTTCTaGTACTCCCTCGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPESWVF*YSLVGS
Trigger: GGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATCAGAAAGGTGCTGACTaGGAGCTGGGTGTTCTGGTA +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYQKGAD*ELGVLV
Trigger: TACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTG...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATCAGATGGAGGTGCCATaGGAGGTGTCCAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYQMEVP*EVSRAS
Trigger: AGAGGCTCTGGACACCTCTCATGGCACCTCCATCTG...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGCTTGCGCATGTCTTTaGCAAAAGTCTCACTATAGG +
Preference number: 4 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTACACL*QKSHYR
Trigger: CCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATACCCCAGCGAAGCTGTaGAGCTTAAGGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYTPAKL*SLRDLP
Trigger: AGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATAAGATGGCACCGATGTaGATGATGGAGTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYKMAPM*MMESAR
Trigger: GCGGGCCGACTCCATCATCCACATCGGTGCCATCTT...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTCTGCCAAGGGCACTGTaGACCAGATCCAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPLPRAL*TRSRIS
Trigger: CGAGATCCTGGATCTGGTCCACAGTGCCCTTGGCAG...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATGTCTGGGTACTGGAATaGCTGGTGAGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYVWVLE*LVRSHR
Trigger: TCGATGTGACCTCACCAGCCATTCCAGTACCCAGAC...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATAGGCTAGTGAACACGTaGCTGATGTTCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYRLVNT*LMFLST
Trigger: GGTGGACAAGAACATCAGTCACGTGTTCACTAGCCT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAGCAGATGGGAAGATTTaGCGGACCACGGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGADGKI*RTTVIL
Trigger: CAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGC...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTTGTGGCCACCACTTCTaGTTGAGCACATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPCGHHF*LSTSRS
Trigger: GGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACA...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATATGCGCCGGTGTACCTaGTCCAGATTCACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYMRRCT*SRFTSL
Trigger: CAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCAT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAACACCCTGTCGTCCTTaGCTGCGTTCTCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRTPCRP*LRSPRR
Trigger: TCTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATAAGGCCAAAATTCCCTaGGTCATGAGGTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYKAKIP*VMRSQA
Trigger: AGCCTGTGACCTCATGACCCAGGGAATTTTGGCCTT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATAGGGTCGTGGCTGGGTaGCACTCTGAGATCTTACAG +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYRVVAG*HSEILQ
Trigger: CTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCT...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGTGCTGACTGAGAGCTaGGTGTTCTGGTACTCCCTC +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYVLTES*VFWYSL
Trigger: GAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCAC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAAGACAGTCACCACTTTaGGAGTCAGTCCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGRQSPL*ESVLGG
Trigger: GCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCT...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAGATGAGGATCCCCACTaGGTAGTCCATGTAGCGCTT +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRDEDPH*VVHVAL
Trigger: AAGCGCTACATGGACTACTCAGTGGGGATCCTCATC...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTACTGGAATGGCTGGTaGGGTCACATCGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYYWNGW*GHIDLC
Trigger: ACACAGGTCGATGTGACCTCACCAGCCATTCCAGTA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTCCTGGTGGCACCGGTTaGTGTTCCACCATAACTCTA +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPPGGTG*CSTITL
Trigger: TAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGG...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTCCTGTGGAAGGCGTTaGCCAGCATCAGAACACTGT +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYSCGRR*PASEHC
Trigger: ACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATACATCTCCAGTTGCTTaGACAGGTCCTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYTSPVA*TGPEMS
Trigger: GGACATTTCAGGACCTGTCCAAGCAACTGGAGATGT...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CAA 72 bp AGGGAGGGACTTTTAGTGGCACAGCTCAGGCTACTTTaGATGGATCATTTCCAGTTCTACAGTTTAGTTACC +
Preference number: 4 (lower is better)
Translates to: REGLLVAQLRLL*MDHFQFYSLVT
Trigger: GGTAACTAAACTGTAGAACTGGAAATGATCCATCAAAAGTAGCCTGAGCTGTGCCACTAAAAGTCCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CAA 72 bp GAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTaGCTTGAATATCAATCATTTCCCCTCATACCAAGG +
Preference number: 4 (lower is better)
Translates to: ESGYGCCLPLEN*LEYQSFPLIPR
Trigger: CCTTGGTATGAGGGGAAATGATTGATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAATTGAGGCTCAGGTCTaGTACAGCCAACTGGAACAC +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGIEAQV*YSQLEH
Trigger: GTGTTCCAGTTGGCTGTATCAGACCTGAGCCTCAAT...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATGGGGAAATTTGCTTGTaGGCAATGTCTTCATCCATG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYGEICL*AMSSSM
Trigger: CATGGATGAAGACATTGCTCACAAGCAAATTTCCCC...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATGTGATCTTCTCACTCTaGAGGATGTCATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: WKESGYGCCLPLENLLEYVIFSL*RMSSLR
Trigger: CCTCAATGATGACATCCTGCAGAGTGAGAAGATCAC...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGAAGAGCTCAGCAAAAGTaGTATCCTGCTCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGRAQQK*YPAPGD
Trigger: ATCCCCTGGAGCAGGATAGCACTTTTGCTGAGCTCT...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGATCTGATACAGCCAACTaGAACACCCTGTCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRSDTAN*NTLSSL
Trigger: CAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGA...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATCTCCATTCTTGCTTATaGTCCGCCAGAGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYLHSCL*SARAQQ
Trigger: TTGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAG...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGACAAGAAGGAGGCCAATaGCCAAAATGCAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRQEGGQ*PKCRRP
Trigger: GGGTCTTCTGCATTTTGGCCATTGGCCTCCTTCTTG...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGGGCAGAAAGCTCAATaGACGCTGGGGAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPGQKAQ*TLGKFA
Trigger: AGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR TCA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGACCTTCTTTGCCTTCCTaGTACCTTCTGAAGGATTGG +
Preference number: 4 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRPSLPS*YLLKDW
Trigger: CCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGG...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGATGCAGTTAAGGCTTaGCATACTATGCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPDAVKA*HTMPLP
Trigger: CGGAAGTGGCATAGTATGGCAAGCCTTAACTGCATC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR GCA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTTTCTGGTTGTCCTTTaGAGATGGGAAGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYFLVVL*RWEDLP
Trigger: CGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CCA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTAGGGAGGAGATGCGGTaGTTATTCCTCATACATTTC +
Preference number: 4 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPREEMR*LFLIHF
Trigger: GAAATGTATGAGGAATAACCACCGCATCTCCTCCCT...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
3UTR CAA 72 bp GGATTCTGGATAGCTTCATTAGGGCAGACGAGTCTTTaGCTTCAAACATTACACAGCTATGTTTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GFWIASLGQTSL*LQTLHSYVSQN
Trigger: GTTTTGAGAAACATAGCTGTGTAATGTTTGAAGCAAAAGACTCGTCTGCCCTAATGAAGCTATCCAGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp GGCAGGTTGCTGCTGGGCCCTGACGACAGTGTCCGGCTGGTGCCATaGCTGCTCTGCTCCGGCAGAAAGGTGCTGACTGAGAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GRLLLGPDDSVRLVP*LLCSGRKVLTESWV
Trigger: CACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp GGCCTCGCCGTCAGGGCTAGGGTTCAGGTGGCAGGCAGTACGTGGTaGACCCCCGGGGTTGCGCTGGACAAAGAGGTGTGGGATGTGCAT +
Preference number: 5 (lower is better)
Translates to: GLAVRARVQVAGSTW*TPGVALDKEVWDVH
Trigger: ATGCACATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACCACGTACTGCCTGCCACCTGAACCCTAGCCCTGACGGCGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp CGTGGTGAACCCCCGGGGTTGCGCTGGACAAAGAGGTGTGGGATGTaGATGGCGTCTGTGAGGGACTGCAGGGCATTGGCGGATGCACAG +
Preference number: 5 (lower is better)
Translates to: RGEPPGLRWTKRCGM*MASVRDCRALADAQ
Trigger: CTGTGCATCCGCCAATGCCCTGCAGTCCCTCACAGACGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp CTGCTGGGCCCTGACGACAGTGTCCGGCTGGTGCCATGGCTGCTCTaGTCCGGCAGAAAGGTGCTGACTGAGAGCTGGGTGTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LLGPDDSVRLVPWLL*SGRKVLTESWVFWY
Trigger: GTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGACACTGTCGTCAGGGCCCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp CCGGCTGGTGCCATGGCTGCTCTGCTCCGGCAGAAAGGTGCTGACTaGGAGCTGGGTGTTCTGGTACTCCCTCGTGGGCTCCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PAGAMAALLRQKGAD*ELGVLVLPRGLQSL
Trigger: CAAGCTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp GTGTCCGGCTGGTGCCATGGCTGCTCTGCTCCGGCAGAAAGGTGCTaGCTGAGAGCTGGGTGTTCTGGTACTCCCTCGTGGGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: VSGWCHGCSAPAERC*LRAGCSGTPSWAPK
Trigger: CTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp CTGCTCTGCTCCGGCAGAAAGGTGCTGACTGAGAGCTGGGTGTTCTaGTACTCCCTCGTGGGCTCCAAAGCTTGGCTTGGAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LLCSGRKVLTESWVF*YSLVGSKAWLGARP
Trigger: GGGCCTGGCTCCAAGCCAAGCTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp GTGCCATGGCTGCTCTGCTCCGGCAGAAAGGTGCTGACTGAGAGCTaGGTGTTCTGGTACTCCCTCGTGGGCTCCAAAGCTTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: VPWLLCSGRKVLTES*VFWYSLVGSKAWLG
Trigger: TCCAAGCCAAGCTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp GGGCTCTGTCGAAACAGTCCCCCATTGGGCGACCTGTGTTTGCACTaGATTGAGGGCATAGTGGCTGAGCTGCTCAGTGGCAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GLCRNSPPLGDLCLH*IEGIVAELLSGSGR
Trigger: CCTGCCACTGCCACTGAGCAGCTCAGCCACTATGCCCTCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCGACAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp AATCCCGTAGCCCTTGCTGCTGATGCTGTTGCCGATGACAGTCACTaGGCAGTCGTCATCTGTCAGGGCTGCATACTCCACCACGGCCAC +
Preference number: 5 (lower is better)
Translates to: NPVALAADAVADDSH*AVVICQGCILHHGH
Trigger: GTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCATCAGCAGCAAGGGCTACGGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp GAATGGCTGGTGAGGTCACATCGACCTGTGTGTGGCCACCACTTCTaGTTGAGCACATCCAGGTCCCCTGTGTCTTGCAGCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: EWLVRSHRPVCGHHF*LSTSRSPVSCSSRI
Trigger: GATCCTGGAGCTGCAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACCAGCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp CAGTTCTGTCACCAGCCTGAGCATGACATCATTGAGACGGACAGGTaGTCTCGAAGCCAGTGTGTAGGCCTCGCCGTCAGGGCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: QFCHQPEHDIIETDR*SRSQCVGLAVRARV
Trigger: AACCCTAGCCCTGACGGCGAGGCCTACACACTGGCTTCGAGACCACCTGTCCGTCTCAATGATGTCATGCTCAGGCTGGTGACAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp AAGACTCACCACCTTGCTGGACAAAGGCTCCATAGACAATCCAAATaGCACTGTGCAGGGTGGCAGAAGCCGAGGGTCGTGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KTHHLAGQRLHRQSK*HCAGWQKPRVVAGW
Trigger: CCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGTCCAGCAAGGTGGTGAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp CTGTGCAGGGTGGCAGAAGCCGAGGGTCGTGGCTGGGTGGCACTCTaGGATCTTACAGCCTGTATCCGATTCAACACGAATATGAGCACG +
Preference number: 5 (lower is better)
Translates to: LCRVAEAEGRGWVAL*DLTACIRFNTNMST
Trigger: CGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp GCTGGACAAAGGCTCCATAGACAATCCAAATGGCACTGTGCAGGGTaGCAGAAGCCGAGGGTCGTGGCTGGGTGGCACTCTGAGATCTTA +
Preference number: 5 (lower is better)
Translates to: AGQRLHRQSKWHCAG*QKPRVVAGWHSEIL
Trigger: TAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp AGTCTGGGTACTGGAATGGCTGGTGAGGTCACATCGACCTGTGTGTaGCCACCACTTCTGCTTGAGCACATCCAGGTCCCCTGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLGTGMAGEVTSTCV*PPLLLEHIQVPCVL
Trigger: CAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACCAGCCATTCCAGTACCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGTTTGAGAGTCAGTCCTaGGAGGCGGCTGCCCATGGG +
Preference number: 5 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQFESQS*EAAAHG
Trigger: CCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAA...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp CATGGCTTGGTAGACTTCCGGATGCAGTTAAGGCTTGCCATACTATaGCACTTCCGGTCTTCCAGCTTCCTGTGGAAGGCGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HGLVDFRMQLRLAIL*HFRSSSFLWKALAS
Trigger: GCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTATGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp TATCCGATTCAACACGAATATGAGCACGCCCACCACAGGAATGGCTaGGGCAATGCAGGCCCACACCGCAAAGTCAAAGGGGGCGAAAAG +
Preference number: 5 (lower is better)
Translates to: YPIQHEYEHAHHRNG*GNAGPHRKVKGGEK
Trigger: CTTTTCGCCCCCTTTGACTTTGCGGTGTGGGCCTGCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp GATGGGAAGATTTGCCGGACCACGGTCATCCTGCCAAGGGCACTGTaGACCAGATCCAGGATCTCGGGGTCACTGATTTCCTCATTCACA +
Preference number: 5 (lower is better)
Translates to: DGKICRTTVILPRAL*TRSRISGSLISSFT
Trigger: TGTGAATGAGGAAATCAGTGACCCCGAGATCCTGGATCTGGTCCACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp GACAATCCAAATGGCACTGTGCAGGGTGGCAGAAGCCGAGGGTCGTaGCTGGGTGGCACTCTGAGATCTTACAGCCTGTATCCGATTCAA +
Preference number: 5 (lower is better)
Translates to: DNPNGTVQGGRSRGS*LGGTLRSYSLYPIQ
Trigger: TTGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp AAGACCCCAGCGAAGCTGTGCAGCTTAAGGGATTTGCCTTCAGTCTaGGTACTGGAATGGCTGGTGAGGTCACATCGACCTGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: KTPAKLCSLRDLPSV*VLEWLVRSHRPVCG
Trigger: GCCACACACAGGTCGATGTGACCTCACCAGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGAACACCCTGTCGTCCTaGGCTGCGTTCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQNTLSS*AAFSSK
Trigger: CTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGTT...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAAGGGACTGCAGGGCATaGGCGGATGCACAGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTRDCRA*ADAQPV
Trigger: CACGGGCTGTGCATCCGCCAATGCCCTGCAGTCCCT...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCCTGATCCAGGAAGCTTaGGAGCCCACGGATATCATA +
Preference number: 5 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGLIQEA*EPTDII
Trigger: TATGATATCCGTGGGCTCCAAAGCTTCCTGGATCAG...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp TGGCACTCTGAGATCTTACAGCCTGTATCCGATTCAACACGAATATaGGCACGCCCACCACAGGAATGGCTGCGGCAATGCAGGCCCACA +
Preference number: 5 (lower is better)
Translates to: WHSEILQPVSDSTRI*ARPPQEWLRQCRPT
Trigger: TGTGGGCCTGCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp CCCTCCATTCCATGGCTTGGTAGACTTCCGGATGCAGTTAAGGCTTaGCATACTATGCCACTTCCGGTCTTCCAGCTTCCTGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PSIPWLGRLPDAVKA*HTMPLPVFQLPVEG
Trigger: GCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTATGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp GATTCACTTCTTTGTCCTCTTTGGGGGTCTCCTGGTGGCACCGGTTaGTGTTCCACCATAACTCTAGAGCAGCCACGAGGCAGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: DSLLCPLWGSPGGTG*CSTITLEQPRGRQE
Trigger: TTCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAAGAGGACAAAGAAGTGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp ACAAAAGGCTCTTCCAAGACAGTCACCACTTTGAGAGTCAGTCCTTaGAGGCGGCTGCCCATGGGCCTCTCCTGTAGACTGCCATTCAAG +
Preference number: 5 (lower is better)
Translates to: TKGSSKTVTTLRVSP*RRLPMGLSCRLPFK
Trigger: CTTGAATGGCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCTTGGAAGAGCCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp AAATGGCACTGTGCAGGGTGGCAGAAGCCGAGGGTCGTGGCTGGGTaGCACTCTGAGATCTTACAGCCTGTATCCGATTCAACACGAATA +
Preference number: 5 (lower is better)
Translates to: KWHCAGWQKPRVVAG*HSEILQPVSDSTRI
Trigger: TATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGTTTCACACCCCTCCATCCCTCAAACCTCTCCCCAAAGATGTCCCACCCAGGCTGCAGGATGTCATCATaGAGGCTCAGGTCTGATACA +
Preference number: 5 (lower is better)
Translates to: GFTPLHPSNLSPKMSHPGCRMSS*RLRSDT
Trigger: TGTATCAGACCTGAGCCTCAATGATGACATCCTGCA...GCCTGGGTGGGACATCTTTGGGGAGAGGTTTGAGGGATGGAGGGGTGTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGACTTCTTTGTCCTCTTaGGGGGTCTCCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQTSLSS*GVSWWH
Trigger: GTGCCACCAGGAGACCCCCAAAGAGGACAAAGAAGT...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGTCCAGATTCACTTCTTaGTCCTCTTTGGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGSRFTS*SSLGVS
Trigger: GGAGACCCCCAAAGAGGACAAAGAAGTGAATCTGGA...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGGGACGCTGGGGAAATTaGCTTGTGAGCAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGGRWGN*LVSNVF
Trigger: GAAGACATTGCTCACAAGCAAATTTCCCCAGCGTCC...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp GGAGGAGATGCGGTGGTTATTCCTCATACATTTCTGGTTGTCCTTTaGAGATGGGAAGATTTGCCGGACCACGGTCATCCTGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: GGDAVVIPHTFLVVL*RWEDLPDHGHPAKG
Trigger: GCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGCATCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp AGAAGGAGGCCAATGGCCAAAATGCAGAAGACCCCAGCGAAGCTGTaGAGCTTAAGGGATTTGCCTTCAGTCTGGGTACTGGAATGGCTG +
Preference number: 5 (lower is better)
Translates to: RRRPMAKMQKTPAKL*SLRDLPSVWVLEWL
Trigger: CAGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGCCATTGGCCTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGGGATTGGACACACAGTaGTCAGCCCCTCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQGLDTQ*SAPPFL
Trigger: CAAGAATGGAGGGGCTGACAACTGTGTGTCCAATCC...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TACCATCTTGAGCCTGATTGTCTAGGGCCATGTCTAGGGCAGGTTGCCCTACAGAAGACAGTCACCACTTaGAGAGTCAGTCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: YHLEPDCLGPCLGQVALQKTVTT*RVSPWR
Trigger: CCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCTT...CTGTAGGGCAACCTGCCCTAGACATGGCCCTAGACAATCAGGCTCAAGATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACATCAGCCCCTCCATTCTaGCTTATGGTCCGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTSAPPF*LMVRQS
Trigger: GCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGA...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp TTGTCCACCTTTTGTAAAGAGACATCCAGACCCAGCCTTGAGGCCTaGTCCAGGAAGCTTTGGAGCCCACGGATATCATACTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LSTFCKETSRPSLEA*SRKLWSPRISYSLS
Trigger: TGACAGCGAGTATGATATCCGTGGGCTCCAAAGCTTCCTGGATCAGGCCTCAAGGCTGGGTCTGGATGTCTCTTTACAAAAGGTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp ATCTCTAGGGCAGAAAGCTCAATGGACGCTGGGGAAATTTGCTTGTaGGCAATGTCTTCATCCATGAGGCTGTTGATGCGCCGGTGTACC +
Preference number: 5 (lower is better)
Translates to: ISRAESSMDAGEICL*AMSSSMRLLMRRCT
Trigger: GGTACACCGGCGCATCAACAGCCTCATGGATGAAGACATTGCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCCTAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 90 bp TACCTTCTGAAGGATTGGACACACAGTTGTCAGCCCCTCCATTCTTaGTTATGGTCCGCCAGAGCTCAGCAAAAGTGCTATCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: YLLKDWTHSCQPLHS*LWSARAQQKCYPAP
Trigger: TGGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 90 bp CCATACTATGCCACTTCCGGTCTTCCAGCTTCCTGTGGAAGGCGTTaGCCAGCATCAGAACACTGTCATACAGGTAGAGATTGGAGATCT +
Preference number: 5 (lower is better)
Translates to: PYYATSGLPASCGRR*PASEHCHTGRDWRS
Trigger: AGATCTCCAATCTCTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTATGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACATGCAGATGGGAAGATTaGCCGGACCACGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTCRWED*PDHGHP
Trigger: AGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCA...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAGGAGATCTGCAGCATTaGGAGGTAGCCTTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTGDLQH*EVAFLW
Trigger: CCACAGGAAGGCTACCTCCAAATGCTGCAGATCTCC...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATCGTGGGCTCCAAAGCTaGGCTTGGAGCCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYRGLQS*AWSQAP
Trigger: GGGGGCCTGGCTCCAAGCCAAGCTTTGGAGCCCACG...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp ATGAGCTCCCCGATCATCCCATTCCAGGAGGTGTTATGGAGCTGGTaGCCATACCTGCCATCAGGGGCCTGGTATATCTCATATTTGAAT +
Preference number: 5 (lower is better)
Translates to: MSSPIIPFQEVLWSW*PYLPSGAWYISYLN
Trigger: ATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGGTCACCAGCTCCATAACACCTCCTGGAATGGGATGATCGGGGAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp AAAGATGCTGATCTTCTCCTCAGGCTTCTTGATGAGGATCCCCACTaGGTAGTCCATGTAGCGCTTGCTGAAGTCCACAACGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: KDADLLLRLLDEDPH*VVHVALAEVHNALS
Trigger: AGAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGATCCTCATCAAGAAGCCTGAGGAGAAGATCAGCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp AGGAGCTTCTTCTCCGATGGTTCTTCCTGCCCTCAGAAAGGCCCAGGAACAGGGAAGTCTCACTATAGGTaGTGCCAAGGATTTCAAACT +
Preference number: 5 (lower is better)
Translates to: RSFFSDGSSCPQKGPGTGKSHYR*CQGFQT
Trigger: AGTTTGAAATCCTTGGCACAACCTATAGTGAGACTT...CCCTGTTCCTGGGCCTTTCTGAGGGCAGGAAGAACCATCGGAGAAGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGGTGAACCCCCGGGGTaGCGCTGGACAAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPGEPPG*RWTKRC
Trigger: ACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp ACCTGTGACTCTGATGCTTCTACTCTCTGTGTCTGTAACCACACTTTCTCTCACCTGAGCATGACATCATaGAGACGGACAGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: TCDSDASTLCVCNHTFSHLSMTS*RRTGGL
Trigger: GAGACCACCTGTCCGTCTCAATGATGTCATGCTCAG...GTGAGAGAAAGTGTGGTTACAGACACAGAGAGTAGAAGCATCAGAGTCACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATGTAGGGGCTGCCATGTaGCAGGGCAATCCCGTAGCC +
Preference number: 5 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYVGAAM*QGNPVA
Trigger: GGCTACGGGATTGCCCTGCAACATGGCAGCCCCTAC...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATCGAAACAGTCCCCCATaGGGCGACCTGTGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: WKESGYGCCLPLENLLEYRNSPP*GDLCLH
Trigger: GTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCG...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 90 bp TTCAGCTCCTCGGTCTTCATGGTGGTGAAAAGGCTAGTGAACACGTaGCTGATGTTCTTGTCCACCTTTTGTAAAGAGACATCCAGACCC +
Preference number: 5 (lower is better)
Translates to: FSSSVFMVVKRLVNT*LMFLSTFCKETSRP
Trigger: GGGTCTGGATGTCTCTTTACAAAAGGTGGACAAGAACATCAGTCACGTGTTCACTAGCCTTTTCACCACCATGAAGACCGAGGAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTCATCCAGACCCAGCCTaGAGGCCTGATCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPHPDPA*RPDPGS
Trigger: GCTTCCTGGATCAGGCCTCAAGGCTGGGTCTGGATG...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGTCTCCACAGCCTCATaGATGAAGGAGTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPVSTAS*MKECAP
Trigger: GGGGGCGCACTCCTTCATCAATGAGGCTGTGGAGAC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATTTCCTGTGGAAGGCGTaGGCCAGCATCAGAACACTG +
Preference number: 5 (lower is better)
Translates to: WKESGYGCCLPLENLLEYFLWKA*ASIRTL
Trigger: CAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAA...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TGGAAAGAATCTGGCTATGGTTGTTGTCTCCCCCTAGAGAACTTGCTTGAATATTCCCAGGTGGCCAGCTaGCGCATGTCTTTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: WKESGYGCCLPLENLLEYSQVAS*RMSLPK
Trigger: TTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGA...ATATTCAAGCAAGTTCTCTAGGGGGAGACAACAACCATAGCCAGATTCTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGACAGGTCCCCTGTGTCTaGCAGCTCCAGGATCCTCTG +
Preference number: 5 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGQVPCV*QLQDPL
Trigger: CAGAGGATCCTGGAGCTGCAAGACACAGGGGACCTG...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAGAGGTCACAGGCTTCTaGCACCGCCTGGAACGGATT +
Preference number: 5 (lower is better)
Translates to: YPQSAHHVETLLSTLLYREVTGF*HRLERI
Trigger: AATCCGTTCCAGGCGGTGCAAGAAGCCTGTGACCTC...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp GGGTTGAGTCCCATACCCTTGAAGCTGGATGGGGTCATATTCTACATCCTAACAATAAGACATCTCCAGTaGCTTGGACAGGTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GLSPIPLKLDGVIFYILTIRHLQ*LGQVLK
Trigger: TTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTAT...TGTTAGGATGTAGAATATGACCCCATCCAGCTTCAAGGGTATGGGACTCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTTCATCCATGAGGCTGTaGATGCGCCGGTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPSSMRL*MRRCTC
Trigger: GCAGGTACACCGGCGCATCAACAGCCTCATGGATGA...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTCCTCCATTCCATGGCTaGGTAGACTTCCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPPPFHG*VDFRMQ
Trigger: CTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGG...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp ATGGATCATTTCCAGTTCTACAGTTTAGTTACCCCACAAAGGGCAATATATGGATCCTGGTGGCACCGGTaGCTGTTCCACCATAACTCT +
Preference number: 5 (lower is better)
Translates to: MDHFQFYSLVTPQRAIYGSWWHR*LFHHNS
Trigger: AGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGA...TCCATATATTGCCCTTTGTGGGGTAACTAAACTGTAGAACTGGAAATGATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp CATTACACAGCTATGTTTCTCAAAACTGTCAAGCTTCTTCTCTATGTAGTCCCTGCCTGGAACGGATTATaGGCCTCGATGACCTTGATG +
Preference number: 5 (lower is better)
Translates to: HYTAMFLKTVKLLLYVVPAWNGL*ASMTLM
Trigger: CATCAAGGTCATCGAGGCCAATAATCCGTTCCAGGC...AGGGACTACATAGAGAAGAAGCTTGACAGTTTTGAGAAACATAGCTGTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTCCTTGGAAGCCAAGTaGGTCTCCACAGCCTCATTG +
Preference number: 5 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYSLEAK*VSTASL
Trigger: CAATGAGGCTGTGGAGACCAACTTGGCTTCCAAGGA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGATTCTCCTCAGGCTTCTaGATGAGGATCCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRFSSGF*MRIPTE
Trigger: CTCAGTGGGGATCCTCATCAAGAAGCCTGAGGAGAA...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TTGTTTATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATTTGCTGCTGATGCTGTaGCCGATGACAGTCACTGAG +
Preference number: 5 (lower is better)
Translates to: LFILSLPIMWRHFYQHFYLLLML*PMTVTE
Trigger: CTCAGTGACTGTCATCGGCAACAGCATCAGCAGCAA...ATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAAATGTCCTTATGGGGTaGTCCATCCTAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRNVLMG*SILDTV
Trigger: CACAGTGTCTAGGATGGACAACCCCATAAGGACATT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAATACCTTCTGAAGGATaGGACACACAGTTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRIPSEG*DTQLSA
Trigger: GGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTAT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS-3UTR CAA 90 bp TATCCTCAGTCTGCCCATCATGTGGAGACACTTCTATCAACACTTTTATATAGAATTTCTGGTTGTCCTTaGCAGATGGGAAGATTTGCC +
Preference number: 5 (lower is better)
Translates to: YPQSAHHVETLLSTLLYRISGCP*QMGRFA
Trigger: GGCAAATCTTCCCATCTGCAAAGGACAACCAGAAAT...TCTATATAAAAGTGTTGATAGAAGTGTCTCCACATGATGGGCAGACTGAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp GCAGGTTGCTGCTGGGCCCTGACGACAGTGTCCGGCTaGTGCCATGGCTGCTCTGCTCCGGCAGAAAGGTGC +
Preference number: 6 (lower is better)
Translates to: AGCCWALTTVSG*CHGCSAPAERC
Trigger: GCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CCCCCGGGGTTGCGCTGGACAAAGAGGTGTGGGATGTaGATGGCGTCTGTGAGGGACTGCAGGGCATTGGCG +
Preference number: 6 (lower is better)
Translates to: PPGLRWTKRCGM*MASVRDCRALA
Trigger: CGCCAATGCCCTGCAGTCCCTCACAGACGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp CTGCTGGGCCCTGACGACAGTGTCCGGCTGGTGCCATaGCTGCTCTGCTCCGGCAGAAAGGTGCTGACTGAG +
Preference number: 6 (lower is better)
Translates to: LLGPDDSVRLVP*LLCSGRKVLTE
Trigger: CTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCAGCCGGACACTGTCGTCAGGGCCCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GTCAGGGCTAGGGTTCAGGTGGCAGGCAGTACGTGGTaGACCCCCGGGGTTGCGCTGGACAAAGAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: VRARVQVAGSTW*TPGVALDKEVW
Trigger: CCACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACCACGTACTGCCTGCCACCTGAACCCTAGCCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GCCATGGCTGCTCTGCTCCGGCAGAAAGGTGCTGACTaGGAGCTGGGTGTTCTGGTACTCCCTCGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: AMAALLRQKGAD*ELGVLVLPRGL
Trigger: GAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp TCAGGTGGCAGGCAGTACGTGGTGAACCCCCGGGGTTaGGCTGGACAAAGAGGTGTGGGATGTGCATGGCGT +
Preference number: 6 (lower is better)
Translates to: SGGRQYVVNPRG*AGQRGVGCAWR
Trigger: ACGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACCACGTACTGCCTGCCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp TTCAGGTGGCAGGCAGTACGTGGTGAACCCCCGGGGTaGCGCTGGACAAAGAGGTGTGGGATGTGCATGGCG +
Preference number: 6 (lower is better)
Translates to: FRWQAVRGEPPG*RWTKRCGMCMA
Trigger: CGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCCGGGGGTTCACCACGTACTGCCTGCCACCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp TGGTGCCATGGCTGCTCTGCTCCGGCAGAAAGGTGCTaGCTGAGAGCTGGGTGTTCTGGTACTCCCTCGTGG +
Preference number: 6 (lower is better)
Translates to: WCHGCSAPAERC*LRAGCSGTPSW
Trigger: CCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CATGGCGTCTGTGAGGGACTGCAGGGCATTGGCGGATaGACAGCCCGTGGATGTGACCAAGGCCAAAATTCC +
Preference number: 6 (lower is better)
Translates to: HGVCEGLQGIGG*TARGCDQGQNS
Trigger: GGAATTTTGGCCTTGGTCACATCCACGGGCTGTGCATCCGCCAATGCCCTGCAGTCCCTCACAGACGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp CACCAGCCTGAGCATGACATCATTGAGACGGACAGGTaGTCTCGAAGCCAGTGTGTAGGCCTCGCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: HQPEHDIIETDR*SRSQCVGLAVR
Trigger: CCTGACGGCGAGGCCTACACACTGGCTTCGAGACCACCTGTCCGTCTCAATGATGTCATGCTCAGGCTGGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp CTGCTCTGCTCCGGCAGAAAGGTGCTGACTGAGAGCTaGGTGTTCTGGTACTCCCTCGTGGGCTCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: LLCSGRKVLTES*VFWYSLVGSKA
Trigger: AGCTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp CCTCTGGGAGAAAAGGTCCCTGTAGGGGCTGCCATGTaGCAGGGCAATCCCGTAGCCCTTGCTGCTGATGCT +
Preference number: 6 (lower is better)
Translates to: PLGEKVPVGAAM*QGNPVALAADA
Trigger: AGCATCAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp CTCCAGGATCCTCTGGGAGAAAAGGTCCCTGTAGGGGCTGCCATGTaGCAGGGCAATCCCGTAGCCCTTGCTGCTGATGCTGTTGCCGAT +
Preference number: 6 (lower is better)
Translates to: LQDPLGEKVPVGAAM*QGNPVALAADAVAD
Trigger: ATCGGCAACAGCATCAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGGATCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp TTGCAGATGGGAAGATTTGCCGGACCACGGTCATCCTaGCAAGGGCACTGTGGACCAGATCCAGGATCTCGG +
Preference number: 6 (lower is better)
Translates to: LQMGRFAGPRSS*QGHCGPDPGSR
Trigger: CCGAGATCCTGGATCTGGTCCACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CAACACGAATATGAGCACGCCCACCACAGGAATGGCTaGGGCAATGCAGGCCCACACCGCAAAGTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: QHEYEHAHHRNG*GNAGPHRKVKG
Trigger: CCCTTTGACTTTGCGGTGTGGGCCTGCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CTTTGTCCTCTTTGGGGGTCTCCTGGTGGCACCGGTTaGTGTTCCACCATAACTCTAGAGCAGCCACGAGGC +
Preference number: 6 (lower is better)
Translates to: LCPLWGSPGGTG*CSTITLEQPRG
Trigger: GCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAAGAGGACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp ATGTGGATGATGGAGTCGGCCCGCACCGTAACGCACTaGCATATCCAGGGAAGAAGCCACAGCGTCAACGCT +
Preference number: 6 (lower is better)
Translates to: MWMMESARTVTH*HIQGRSHSVNA
Trigger: AGCGTTGACGCTGTGGCTTCTTCCCTGGATATGCCAGTGCGTTACGGTGCGGGCCGACTCCATCATCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp ATTTGCCGGACCACGGTCATCCTGCCAAGGGCACTGTaGACCAGATCCAGGATCTCGGGGTCACTGATTTCC +
Preference number: 6 (lower is better)
Translates to: ICRTTVILPRAL*TRSRISGSLIS
Trigger: GGAAATCAGTGACCCCGAGATCCTGGATCTGGTCCACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp TGTGCAGGGTGGCAGAAGCCGAGGGTCGTGGCTGGGTaGCACTCTGAGATCTTACAGCCTGTATCCGATTCA +
Preference number: 6 (lower is better)
Translates to: CAGWQKPRVVAG*HSEILQPVSDS
Trigger: TGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp AATGGCACTGTGCAGGGTGGCAGAAGCCGAGGGTCGTaGCTGGGTGGCACTCTGAGATCTTACAGCCTGTAT +
Preference number: 6 (lower is better)
Translates to: NGTVQGGRSRGS*LGGTLRSYSLY
Trigger: ATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp ACTGGAATGGCTGGTGAGGTCACATCGACCTGTGTGTaGCCACCACTTCTGCTTGAGCACATCCAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: TGMAGEVTSTCV*PPLLLEHIQVP
Trigger: GGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACCAGCCATTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp TCCGGCAGAAAGGTGCTGACTGAGAGCTGGGTGTTCTaGTACTCCCTCGTGGGCTCCAAAGCTTGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: SGRKVLTESWVF*YSLVGSKAWLG
Trigger: TCCAAGCCAAGCTTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp CCATCACAAAAGGCTCTTCCAAGACAGTCACCACTTTaGGAGTCAGTCCTTGGAGGCGGCTGCCCATGGGCC +
Preference number: 6 (lower is better)
Translates to: PSQKALPRQSPL*ESVLGGGCPWA
Trigger: GGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCTTGGAAGAGCCTTTTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GCCCTTGCTGCTGATGCTGTTGCCGATGACAGTCACTaGGCAGTCGTCATCTGTCAGGGCTGCATACTCCAC +
Preference number: 6 (lower is better)
Translates to: ALAADAVADDSH*AVVICQGCILH
Trigger: GTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCATCAGCAGCAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp CGAAACAGTCCCCCATTGGGCGACCTGTGTTTGCACTaGATTGAGGGCATAGTGGCTGAGCTGCTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: RNSPPLGDLCLH*IEGIVAELLSG
Trigger: GCCACTGAGCAGCTCAGCCACTATGCCCTCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp CCCTGGGTCATGAGGTCACAGGCTTCTTGCACCGCCTaGAACGGATTATTGGCCTCGATGACCTTGATGGAG +
Preference number: 6 (lower is better)
Translates to: PWVMRSQASCTA*NGLLASMTLME
Trigger: CTCCATCAAGGTCATCGAGGCCAATAATCCGTTCCAGGCGGTGCAAGAAGCCTGTGACCTCATGACCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp TCTTCCAAGACAGTCACCACTTTGAGAGTCAGTCCTTaGAGGCGGCTGCCCATGGGCCTCTCCTGTAGACTG +
Preference number: 6 (lower is better)
Translates to: SSKTVTTLRVSP*RRLPMGLSCRL
Trigger: CAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCTTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp CACCTTGCTGGACAAAGGCTCCATAGACAATCCAAATaGCACTGTGCAGGGTGGCAGAAGCCGAGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: HLAGQRLHRQSK*HCAGWQKPRVV
Trigger: CACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGTCCAGCAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp AGGTCTGATACAGCCAACTGGAACACCCTGTCGTCCTaGGCTGCGTTCTCCTCGAAGATGGCACCGATGTGG +
Preference number: 6 (lower is better)
Translates to: RSDTANWNTLSS*AAFSSKMAPMW
Trigger: CCACATCGGTGCCATCTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp TCTTTGTCCTCTTTGGGGGTCTCCTGGTGGCACCGGTaGCTGTTCCACCATAACTCTAGAGCAGCCACGAGG +
Preference number: 6 (lower is better)
Translates to: SLSSLGVSWWHR*LFHHNSRAATR
Trigger: CCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAAGAGGACAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp TTGAGGCTCAGGTCTGATACAGCCAACTGGAACACCCTGTCGTCCTaGGCTGCGTTCTCCTCGAAGATGGCACCGATGTGGATGATGGAG +
Preference number: 6 (lower is better)
Translates to: LRLRSDTANWNTLSS*AAFSSKMAPMWMME
Trigger: CTCCATCATCCACATCGGTGCCATCTTCGAGGAGAACGCAGCCAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGACCTGAGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GTGGCAGAAGCCGAGGGTCGTGGCTGGGTGGCACTCTaGGATCTTACAGCCTGTATCCGATTCAACACGAAT +
Preference number: 6 (lower is better)
Translates to: VAEAEGRGWVAL*DLTACIRFNTN
Trigger: ATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAGAGTGCCACCCAGCCACGACCCTCGGCTTCTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp ACCATCACAAAAGGCTCTTCCAAGACAGTCACCACTTaGAGAGTCAGTCCTTGGAGGCGGCTGCCCATGGGC +
Preference number: 6 (lower is better)
Translates to: TITKGSSKTVTT*RVSPWRRLPMG
Trigger: GCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTCTTGGAAGAGCCTTTTGTGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp CAGAAGACCCCAGCGAAGCTGTGCAGCTTAAGGGATTaGCCTTCAGTCTGGGTACTGGAATGGCTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: QKTPAKLCSLRD*PSVWVLEWLVR
Trigger: CCTCACCAGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp AGATTCACTTCTTTGTCCTCTTTGGGGGTCTCCTGGTGGCACCGGTaGCTGTTCCACCATAACTCTAGAGCAGCCACGAGGCAGGCAAGA +
Preference number: 6 (lower is better)
Translates to: RFTSLSSLGVSWWHR*LFHHNSRAATRQAR
Trigger: TCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAAGAGGACAAAGAAGTGAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GGAGCCCACGGATATCATACTCGCTGTCATAGAACATaGCGAACTTCTGCCAGCGCAGTTCTGTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: GAHGYHTRCHRT*RTSASAVLSPA
Trigger: GGCTGGTGACAGAACTGCGCTGGCAGAAGTTCGTCATGTTCTATGACAGCGAGTATGATATCCGTGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp CCGATCATCCCATTCCAGGAGGTGTTATGGAGCTGGTaGCCATACCTGCCATCAGGGGCCTGGTATATCTCA +
Preference number: 6 (lower is better)
Translates to: PIIPFQEVLWSW*PYLPSGAWYIS
Trigger: TGAGATATACCAGGCCCCTGATGGCAGGTATGGTCACCAGCTCCATAACACCTCCTGGAATGGGATGATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp ATGTCATCATTGAGGCTCAGGTCTGATACAGCCAACTaGAACACCCTGTCGTCCTTGGCTGCGTTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: MSSLRLRSDTAN*NTLSSLAAFSS
Trigger: CGAGGAGAACGCAGCCAAGGACGACAGGGTGTTCCAGTTGGCTGTATCAGACCTGAGCCTCAATGATGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp GCCACTTCCGGTCTTCCAGCTTCCTGTGGAAGGCGTTaGCCAGCATCAGAACACTGTCATACAGGTAGAGAT +
Preference number: 6 (lower is better)
Translates to: ATSGLPASCGRR*PASEHCHTGRD
Trigger: ATCTCTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp GCCATACTATGCCACTTCCGGTCTTCCAGCTTCCTGTaGAAGGCGTTGGCCAGCATCAGAACACTGTCATAC +
Preference number: 6 (lower is better)
Translates to: AILCHFRSSSFL*KALASIRTLSY
Trigger: GTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTATGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp AGCTTAAGGGATTTGCCTTCAGTCTGGGTACTGGAATaGCTGGTGAGGTCACATCGACCTGTGTGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: SLRDLPSVWVLE*LVRSHRPVCGH
Trigger: GTGGCCACACACAGGTCGATGTGACCTCACCAGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp GGGAGGAGATGCGGTGGTTATTCCTCATACATTTCTGGTTGTCCTTaGCAGATGGGAAGATTTGCCGGACCACGGTCATCCTGCCAAGGG +
Preference number: 6 (lower is better)
Translates to: GRRCGGYSSYISGCP*QMGRFAGPRSSCQG
Trigger: CCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGCATCTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp GCCAAAATGCAGAAGACCCCAGCGAAGCTGTGCAGCTTAAGGGATTaGCCTTCAGTCTGGGTACTGGAATGGCTGGTGAGGTCACATCGA +
Preference number: 6 (lower is better)
Translates to: AKMQKTPAKLCSLRD*PSVWVLEWLVRSHR
Trigger: TCGATGTGACCTCACCAGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GAGATCTTACAGCCTGTATCCGATTCAACACGAATATaGGCACGCCCACCACAGGAATGGCTGCGGCAATGC +
Preference number: 6 (lower is better)
Translates to: EILQPVSDSTRI*ARPPQEWLRQC
Trigger: GCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp ATACATTTCTGGTTGTCCTTTGCAGATGGGAAGATTTaGCGGACCACGGTCATCCTGCCAAGGGCACTGTGG +
Preference number: 6 (lower is better)
Translates to: IHFWLSFADGKI*RTTVILPRALW
Trigger: CCACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CCATGGCTTGGTAGACTTCCGGATGCAGTTAAGGCTTaGCATACTATGCCACTTCCGGTCTTCCAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: PWLGRLPDAVKA*HTMPLPVFQLP
Trigger: AGGAAGCTGGAAGACCGGAAGTGGCATAGTATGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp CCAATGGCCAAAATGCAGAAGACCCCAGCGAAGCTGTaGAGCTTAAGGGATTTGCCTTCAGTCTGGGTACTG +
Preference number: 6 (lower is better)
Translates to: PMAKMQKTPAKL*SLRDLPSVWVL
Trigger: CAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp TCTTCATCCATGAGGCTGTTGATGCGCCGGTGTACCTaGTCCAGATTCACTTCTTTGTCCTCTTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSSMRLLMRRCT*SRFTSLSSLGV
Trigger: GACCCCCAAAGAGGACAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCATCAACAGCCTCATGGATGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CCA 72 bp TGGACACACAGTTGTCAGCCCCTCCATTCTTGCTTATaGTCCGCCAGAGCTCAGCAAAAGTGCTATCCTGCT +
Preference number: 6 (lower is better)
Translates to: WTHSCQPLHSCL*SARAQQKCYPA
Trigger: AGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGACAACTGTGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp CAGAGCAGGGAGGAGATGCGGTGGTTATTCCTCATACATTTCTGGTaGTCCTTTGCAGATGGGAAGATTTGCCGGACCACGGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: QSREEMRWLFLIHFW*SFADGKICRTTVIL
Trigger: CAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGCATCTCCTCCCTGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp CCCTTCTTTGCCTTCCTGATACCTTCTGAAGGATTGGACACACAGTaGTCAGCCCCTCCATTCTTGCTTATGGTCCGCCAGAGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PFFAFLIPSEGLDTQ*SAPPFLLMVRQSSA
Trigger: TGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp ATACCTTCTGAAGGATTGGACACACAGTTGTCAGCCCCTCCATTCTaGCTTATGGTCCGCCAGAGCTCAGCAAAAGTGCTATCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: IPSEGLDTQLSAPPF*LMVRQSSAKVLSCS
Trigger: GGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GATCTTCTCCTCAGGCTTCTTGATGAGGATCCCCACTaGGTAGTCCATGTAGCGCTTGCTGAAGTCCACAAC +
Preference number: 6 (lower is better)
Translates to: DLLLRLLDEDPH*VVHVALAEVHN
Trigger: GTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGATCCTCATCAAGAAGCCTGAGGAGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp TCTCCGAGTCCCAGGTGGCCAGCTTGCGCATGTCTTTaGCAAAAGTCTCACTATAGGTTGTGCCAAGGATTT +
Preference number: 6 (lower is better)
Translates to: SPSPRWPACACL*QKSHYRLCQGF
Trigger: AAATCCTTGGCACAACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGACTCGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp AGCAGAGTCCCGGACAGTGCCATAAGACATCTCCAGTaGCTTGGACAGGTCCTGAAATGTCCTTATGGGGTT +
Preference number: 6 (lower is better)
Translates to: SRVPDSAIRHLQ*LGQVLKCPYGV
Trigger: AACCCCATAAGGACATTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTATGGCACTGTCCGGGACTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp GCAGAAAGCTCAATGGACGCTGGGGAAATTTGCTTGTaGGCAATGTCTTCATCCATGAGGCTGTTGATGCGC +
Preference number: 6 (lower is better)
Translates to: AESSMDAGEICL*AMSSSMRLLMR
Trigger: GCGCATCAACAGCCTCATGGATGAAGACATTGCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp GCGGTGGTTATTCCTCATACATTTCTGGTTGTCCTTTaGAGATGGGAAGATTTGCCGGACCACGGTCATCCT +
Preference number: 6 (lower is better)
Translates to: AVVIPHTFLVVL*RWEDLPDHGHP
Trigger: AGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS GCA 72 bp AAGGATTGGACACACAGTTGTCAGCCCCTCCATTCTTaGTTATGGTCCGCCAGAGCTCAGCAAAAGTGCTAT +
Preference number: 6 (lower is better)
Translates to: KDWTHSCQPLHS*LWSARAQQKCY
Trigger: ATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATGGAGGGGCTGACAACTGTGTGTCCAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp TGCGGTGGTTATTCCTCATACATTTCTGGTTGTCCTTaGCAGATGGGAAGATTTGCCGGACCACGGTCATCC +
Preference number: 6 (lower is better)
Translates to: CGGYSSYISGCP*QMGRFAGPRSS
Trigger: GGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp GAGGAGATGCGGTGGTTATTCCTCATACATTTCTGGTaGTCCTTTGCAGATGGGAAGATTTGCCGGACCACG +
Preference number: 6 (lower is better)
Translates to: EEMRWLFLIHFW*SFADGKICRTT
Trigger: CGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGGAATAACCACCGCATCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 72 bp CCATACCTGCCATCAGGGGCCTGGTATATCTCATATTaGAATCCTAGAGCCTTAGCCAGTGCATCCAGCACA +
Preference number: 6 (lower is better)
Translates to: PYLPSGAWYISY*NPRALASASST
Trigger: TGTGCTGGATGCACTGGCTAAGGCTCTAGGATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS CAA 90 bp CCCTTTTTAATCGTGTCTAGCATGGATCTCCCTCCATTCCATGGCTaGGTAGACTTCCGGATGCAGTTAAGGCTTGCCATACTATGCCAC +
Preference number: 6 (lower is better)
Translates to: PFLIVSSMDLPPFHG*VDFRMQLRLAILCH
Trigger: GTGGCATAGTATGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGGAGATCCATGCTAGACACGATTAAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7
CDS TCA 72 bp TCGGTCTTCATGGTGGTGAAAAGGCTAGTGAACACGTaGCTGATGTTCTTGTCCACCTTTTGTAAAGAGACA +
Preference number: 6 (lower is better)
Translates to: SVFMVVKRLVNT*LMFLSTFCKET
Trigger: TGTCTCTTTACAAAAGGTGGACAAGAACATCAGTCACGTGTTCACTAGCCTTTTCACCACCATGAAGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043349.7