Pregenerated sensors for GRHPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035637Ensembl transcript IDs: ENSMUST00000045078.13, ENSMUST00000128973.2, ENSMUST00000151148.8, ENSMUST00000151631.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATaGCACACTGTCACATCAGTGAGTTCTAGGTTCAGCGAGAGACCA | + |
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Preference number: 1 (lower is better) Translates to: RWFPGAPDLPCTVTS*HTVTSVSSRFSERP Trigger: TGGTCTCTCGCTGAACCTAGAACTCACTGATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR CCA 90 bp | AAGACTGTAATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTaGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGT | + |
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Preference number: 1 (lower is better) Translates to: KTVIPSQERWRQVVP*SSRPAMHCHIMAHC Trigger: ACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGATTACAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAGCAGTAGAGGAGGCCTaGCCCAGGCTCTCACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CGKPPKWQAHLPISRSPEAVEEA*PRLSPK Trigger: CTTTGGTGAGAGCCTGGGGCAGGCCTCCTCTACTGC...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGAGTGGCAAGCCCATCTaGCCATTTCCAGGTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMSGKPI*PFPGPL Trigger: CAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACT...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCAGCTTGGCTCTGTCTaGCAAGATGTCTCCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMQLGSV*QDVSSP Trigger: TGGGCTGGAGACATCTTGCCAGACAGAGCCAAGCTG...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGTCCGAAGTCCAGCTTaGCTCTGTCTGGCAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMVRSPA*LCLARC Trigger: ACATCTTGCCAGACAGAGCCAAGCTGGACTTCGGAC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR-3UTR CCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTGGCAAGCCCCCAAAGTaGCAAGCCCATCTGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: HRPRHCVRSCLMLELQAFGKPPK*QAHLPI Trigger: AATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCC...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR TCA 72 bp | AAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTaGAAATGCAGTAGAGGAGGCCTGCCCCAGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: KVASPSAHFQVP*KCSRGGLPQAL Trigger: GAGAGCCTGGGGCAGGCCTCCTCTACTGCATTTTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| 3UTR GCA 72 bp | GGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCATaGACTGTCACATCATGGCACACTGTCACATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GDRWFPGAPDLP*TVTSWHTVTSV Trigger: CACTGATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR CCA 72 bp | ATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTaGAGCTCCCGACCTGCCATGCACTGTCACATCATG | + |
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Preference number: 3 (lower is better) Translates to: IPSQERWRQVVP*SSRPAMHCHIM Trigger: CATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR GCA 72 bp | GAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTaGCATGCACTGTCACATCATGGCACACTGTCACAT | + |
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Preference number: 3 (lower is better) Translates to: EMETGGSLELPT*HALSHHGTLSH Trigger: ATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR TCA 72 bp | CATGCACTGTCACATCATGGCACACTGTCACATCAGTaGGTTCTAGGTTCAGCGAGAGACCATGTCTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: HALSHHGTLSHQ*VLGSARDHVSK Trigger: TTTGGAGACATGGTCTCTCGCTGAACCTAGAACTCACTGATGTGACAGTGTGCCATGATGTGACAGTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAGAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGACCGGCGGCAGGTGGTaGGGAGGAGGGAGACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PGEMETGGSLELPTCHALTGGRW*GGGRRR Trigger: TCGCCGTCTCCCTCCTCCTCACCACCTGCCGCCGGT...CAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAAACTCGGCTGCTTCCTaGGGCCTGGGCTGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPENSAAS*GLGWRP Trigger: GGGGCGCCAGCCCAGGCCTCAGGAAGCAGCCGAGTT...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | ATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCCTGCTTCCTGAGGCCTaGGCTGGCGCCCCGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: IPSQERWRQVVPWSSRPALLPEA*AGAPCK Trigger: TTTACACGGGGCGCCAGCCCAGGCCTCAGGAAGCAG...GGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAATTCCACCTCACAGTCTaGGGCCTGGGCGAGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEFHLTV*GLGERS Trigger: GCTGCGCTCGCCCAGGCCGCAGACTGTGAGGTGGAA...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | TGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCTTCCACCTCACAGTCTaGGGCCTGGGCGAGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WFPGAPDLPCTVTSWHTVFHLTV*GLGERS Trigger: GCTGCGCTCGCCCAGGCCGCAGACTGTGAGGTGGAA...GACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | ATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCGCCCCAGCCCCACAATaGCAACAGTGCTCTGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: IPSQERWRQVVPWSSRPAAPAPQ*QQCSAR Trigger: TCTCGCAGAGCACTGTTGGCATTGTGGGGCTGGGGC...GGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCCGATGGCCTGACCTATaGGCCCCAGCCCCACAATGC | + |
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Preference number: 4 (lower is better) Translates to: WFPGAPDLPCTVTSWHTVRWPDL*APAPQC Trigger: GCATTGTGGGGCTGGGGCGCATAGGTCAGGCCATCG...GACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAGCCCCCACCACACCTTaGTCCAGATCCTTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEAPTTP*SRSFLG Trigger: CCCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGC...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | GAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCCGGAGGGGCAAACTCTaGCTGAAACTCGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ETGGSLELPTCHALSHHGRRGKL*LKLGCF Trigger: GAAGCAGCCGAGTTTCAGGCAGAGTTTGCCCCTCCG...GCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACCCACAATGCCAACAGTaGTCTGCGAGAGTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QVVPWSSRPAMHCHIMAHPQCQQ*SARVRS Trigger: GCTACGGACTCTCGCAGAGCACTGTTGGCATTGTGG...GTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAGAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCATGCACTGGGATCCCGCGCTTCTTaGTTTCATCCAAAGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PGEMETGGSLELPTCHALGSRAS*FHPKPS Trigger: ACTTGGCTTTGGATGAAATCAAGAAGCGCGGGATCC...CAGTGCATGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCACATCAGGGAGACGGCGAGTTCTaGAGTGGCATCTGTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LELPTCHALSHHGTLSHQGDGEF*SGICQD Trigger: GTCCTGACAGATGCCACTGCAGAACTCGCCGTCTCC...CTGATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAACCACAATGCCAACAGTaGTCTGCGAGAGTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEPQCQQ*SARVRS Trigger: GCTACGGACTCTCGCAGAGCACTGTTGGCATTGTGG...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | CCTGGCCAAGACTGTAATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTGCGGCGAGTTCTGCAGTaGCATCTGTCAGGACACCTG | + |
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Preference number: 4 (lower is better) Translates to: PGQDCNPIPGEMETGGSLRRVLQ*HLSGHL Trigger: CAGGTGTCCTGACAGATGCCACTGCAGAACTCGCCG...CAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGATTACAGTCTTGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| 3UTR CAA 72 bp | CCTGCCCCAGGCTCTCACCAAAGTCCGAAGTCCAGCTaGGCTCTGTCTGGCAAGATGTCTCCAGCCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: PAPGSHQSPKSS*ALSGKMSPAHE Trigger: TTCATGGGCTGGAGACATCTTGCCAGACAGAGCCAAGCTGGACTTCGGACTTTGGTGAGAGCCTGGGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | AAACCTGGCCAAGACTGTAATCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCGCCCCCACCACACCTTaGTCCAGATCCTTTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KPGQDCNPIPGEMETGGSAPTTP*SRSFLG Trigger: CCCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGC...GGAACCACCTGTCTCCATCTCTCCTGGGATGGGATTACAGTCTTGGCCAGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAGCTCCAGATCCTTTCTaGGGATGGGGTCATCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEAPDPF*GWGHPN Trigger: ATTCGGATGACCCCATCCCCAGAAAGGATCTGGAGC...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | CCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCACATCGCTCCAGATCCTTTCTaGGGATGGGGTCATCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: PWSSRPAMHCHIMAHCHIAPDPF*GWGHPN Trigger: ATTCGGATGACCCCATCCCCAGAAAGGATCTGGAGC...GATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAACCACTGGCTAGTGCCTaGTACAGGTCTTCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEPLASA*YRSSWF Trigger: AAACCAGGAAGACCTGTACCAGGCACTAGCCAGTGG...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR TCA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAGGATCCCGCGCTTCTTaGTTTCATCCAAAGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: CGKPPKWQAHLPISRSPEGSRAS*FHPKPS Trigger: ACTTGGCTTTGGATGAAATCAAGAAGCGCGGGATCC...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TCCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCACATTCATCCAAAGCCAAGTaGTCGACCCCCACAGACAAG | + |
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Preference number: 4 (lower is better) Translates to: SLELPTCHALSHHGTLSHSSKAK*STPTDK Trigger: CTTGTCTGTGGGGGTCGACCACTTGGCTTTGGATGA...ATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR CCA 90 bp | GGCACTAAAAACCTGGCCAAGACTGTAATCCCATCCCAGGAGAGATGGAGACAGTCTTCACTTCCTCTATaGCCTCCGGCAACCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GTKNLAKTVIPSQERWRQSSLPL*PPATGG Trigger: GCCGCCGGTTGCCGGAGGCCATAGAGGAAGTGAAGA...CTGTCTCCATCTCTCCTGGGATGGGATTACAGTCTTGGCCAGGTTTTTAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTACCGGCGGCAGGTGGTaGGGAGGAGGGAGACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFTGGRW*GGGRRR Trigger: TCGCCGTCTCCCTCCTCCTCACCACCTGCCGCCGGT...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTGCTTCCTGAGGCCTaGGCTGGCGCCCCGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMLLPEA*AGAPCK Trigger: TTTACACGGGGCGCCAGCCCAGGCCTCAGGAAGCAG...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGCCCCAGCCCCACAATaGCAACAGTGCTCTGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMAPAPQ*QQCSAR Trigger: TCTCGCAGAGCACTGTTGGCATTGTGGGGCTGGGGC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGCAGTGGTTCAGGGGTaGTCACATCCAGTCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMAVVQG*SHPVPL Trigger: CAGCGGGACTGGATGTGACCACCCCTGAACCACTGC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR TCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCACGACAATGAAGTCTaGCTCTGCGGCCAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMHDNEV*LCGQLS Trigger: GCTCAGCTGGCCGCAGAGTCAGACTTCATTGTCGTG...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGGAGACGGCGAGTTCTaGAGTGGCATCTGTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMGDGEF*SGICQD Trigger: GTCCTGACAGATGCCACTGCAGAACTCGCCGTCTCC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR GCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTCGATGGCCTGACCTATaGGCCCCAGCCCCACAATGC | + |
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Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFRWPDL*APAPQC Trigger: GCATTGTGGGGCTGGGGCGCATAGGTCAGGCCATCG...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGATCTGTCAGGACACCTaGCGTGTAGCCCACCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMICQDT*RVAHPD Trigger: ATCCGGGTGGGCTACACGCCAGGTGTCCTGACAGAT...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCGGCGAGTTCTGCAGTaGCATCTGTCAGGACACCTG | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMRRVLQ*HLSGHL Trigger: CAGGTGTCCTGACAGATGCCACTGCAGAACTCGCCG...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | GCAATAGGCACTAAAAACCTGGCCAAGACTGTAATCCCATCCCAGGAGAGATGGTCTCTGGACACCGAATaGTTTCAGTCGTCGAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: AIGTKNLAKTVIPSQERWSLDTE*FQSSSD Trigger: ATCGCTCGACGACTGAAACCATTCGGTGTCCAGAGA...CCATCTCTCCTGGGATGGGATTACAGTCTTGGCCAGGTTTTTAGTGCCTATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTAGGGTCAGCAGGGGGTaGCTCGGAGGCAGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFRVSRG*LGGSGS Trigger: TGAACCACTGCCTCCGAGCCACCCCCTGCTGACCCT...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGTGGCACTGCCAATGTaGGGCAGGATCACGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMVALPM*GRITQF Trigger: GAACTGCGTGATCCTGCCCCACATTGGCAGTGCCAC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
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| CDS-3UTR CCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTTCTTCACTTCCTCTATaGCCTCCGGCAACCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFSSLPL*PPATGG Trigger: GCCGCCGGTTGCCGGAGGCCATAGAGGAAGTGAAGA...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGTGCGAGTTTTGTAGGTaGCACTGCCAATGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMCEFCR*HCQCGA Trigger: TGCCCCACATTGGCAGTGCCACCTACAAAACTCGCA...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGTCTGAGGTTGGCTCCTaGGGCATCCAGAAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMSEVGS*GIQKFL Trigger: AAGAAACTTCTGGATGCCGCAGGAGCCAACCTCAGA...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGTTTTGTAGGTGGCACTaGCAATGTGGGGCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMFCRWH*QCGAGS Trigger: TGATCCTGCCCCACATTGGCAGTGCCACCTACAAAA...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGCAAGGACATGGTGTTaGGAGTTTTGTAGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMARTWC*EFCRWH Trigger: GTGCCACCTACAAAACTCGCAACACCATGTCCTTGC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR GCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGTCTGGAAGAAATCCTTaGTGCAGAGCCCCATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMSGRNP*CRAPWY Trigger: ATACCATGGGGCTCTGCAGCAAGGATTTCTTCCAGA...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTTCATCCAAAGCCAAGTaGTCGACCCCCACAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFSSKAK*STPTDK Trigger: CTTGTCTGTGGGGGTCGACCACTTGGCTTTGGATGA...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CCA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTTCTCTGGACACCGAATaGTTTCAGTCGTCGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRPRHCVRSCLMLELQAFSLDTE*FQSSSD Trigger: ATCGCTCGACGACTGAAACCATTCGGTGTCCAGAGA...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CCA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGTGTTCTTCATCTTCTaGAAGAAATCCTTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMVFFIF*KKSLLQ Trigger: CTGCAGCAAGGATTTCTTCCAGAAGATGAAGAACAC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS GCA 90 bp | TCTGGGGATGGGGTCATCCGAATTCCACTGTTCCACCTCACAGTCTaGGGCCTGGGCGAGCGCAGCCCTGCCCTCGGCAGGCAACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGDGVIRIPLFHLTV*GLGERSPALGRQRA Trigger: GGCCCGTTGCCTGCCGAGGGCAGGGCTGCGCTCGCCCAGGCCGCAGACTGTGAGGTGGAACAGTGGAATTCGGATGACCCCATCCCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | ATGGGGTCATCCGAATTCCACTGTTCCACCTCACAGTCTGCGGCCTaGGCGAGCGCAGCCCTGCCCTCGGCAGGCAACGGGCCAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: MGSSEFHCSTSQSAA*ASAALPSAGNGPVT Trigger: CGTCACTGGCCCGTTGCCTGCCGAGGGCAGGGCTGCGCTCGCCCAGGCCGCAGACTGTGAGGTGGAACAGTGGAATTCGGATGACCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151631.2 |
||
| CDS-3UTR CAA 90 bp | TCCCATCCCAGGAGAGATGGAGACAGGTGGTTCCCTGGAGCTCCCGACCTGCCAGGCCCCCACCACACCTaGCTCCAGATCCTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHPRRDGDRWFPGAPDLPGPHHT*LQILSG Trigger: CCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCC...TGGCAGGTCGGGAGCTCCAGGGAACCACCTGTCTCCATCTCTCCTGGGATGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
||
| CDS TCA 90 bp | CGTTCTTCACTTCCTCTATGGCCTCCGGCAACCGGCGGCAGGTGGTaGGGAGGAGGGAGACGGCGAGTTCTGCAGTGGCATCTGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSSLPLWPPATGGRW*GGGRRRVLQWHLSG Trigger: TCCTGACAGATGCCACTGCAGAACTCGCCGTCTCCCTCCTCCTCACCACCTGCCGCCGGTTGCCGGAGGCCATAGAGGAAGTGAAGAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS GCA 90 bp | GAGCGATGGCCTGACCTATGCGCCCCAGCCCCACAATGCCAACAGTaGTCTGCGAGAGTCCGTAGCCGCACATCCATAATGGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERWPDLCAPAPQCQQ*SARVRSRTSIMGSR Trigger: CCTGGAGCCCATTATGGATGTGCGGCTACGGACTCTCGCAGAGCACTGTTGGCATTGTGGGGCTGGGGCGCATAGGTCAGGCCATCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | AGGCCTGGGCTGGCGCCCCGTGTAAAGAAATCTCTGGACACCGAATaGTTTCAGTCGTCGAGCGATGGCCTGACCTATGCGCCCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPGLAPRVKKSLDTE*FQSSSDGLTYAPQP Trigger: GGGCTGGGGCGCATAGGTCAGGCCATCGCTCGACGACTGAAACCATTCGGTGTCCAGAGATTTCTTTACACGGGGCGCCAGCCCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | GATCACGCAGTTCTTGAGGGTCAGCAGGGGGTGGCTCGGAGGCAGTaGTTCAGGGGTGGTCACATCCAGTCCCGCTGCTGCAATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DHAVLEGQQGVARRQ*FRGGHIQSRCCNLT Trigger: GGTCAGATTGCAGCAGCGGGACTGGATGTGACCACCCCTGAACCACTGCCTCCGAGCCACCCCCTGCTGACCCTCAAGAACTGCGTGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 90 bp | AGAAGTTTCTTGTCCACACGGTCAGAGAGGCGGCAGAGCAAGCCATaGGCCCCCACCACACCTTGCTCCAGATCCTTTCTGGGGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSFLSTRSERRQSKP*APTTPCSRSFLGMG Trigger: CCCCATCCCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCCCATGGCTTGCTCTGCCGCCTCTCTGACCGTGTGGACAAGAAACTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | GAGGAGGGAGACGGCGAGTTCTGCAGTGGCATCTGTCAGGACACCTaGCGTGTAGCCCACCCGGATCCCGCGCTTCTTGATTTCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EEGDGEFCSGICQDT*RVAHPDPALLDFIQ Trigger: TTGGATGAAATCAAGAAGCGCGGGATCCGGGTGGGCTACACGCCAGGTGTCCTGACAGATGCCACTGCAGAACTCGCCGTCTCCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS GCA 90 bp | GTCGACCCCCACAGACAAGGTGCTGATGACTCTGAGGTTGGCTCCTaGGGCATCCAGAAGTTTCTTGTCCACACGGTCAGAGAGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VDPHRQGADDSEVGS*GIQKFLVHTVREAA Trigger: TGCCGCCTCTCTGACCGTGTGGACAAGAAACTTCTGGATGCCGCAGGAGCCAACCTCAGAGTCATCAGCACCTTGTCTGTGGGGGTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | ACGGAGGGGCAAACTCTGCCTGAAACTCGGCTGCTTCCTGAGGCCTaGGCTGGCGCCCCGTGTAAAGAAATCTCTGGACACCGAATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TEGQTLPETRLLPEA*AGAPCKEISGHRMV Trigger: AACCATTCGGTGTCCAGAGATTTCTTTACACGGGGCGCCAGCCCAGGCCTCAGGAAGCAGCCGAGTTTCAGGCAGAGTTTGCCCCTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | AGAGCAAGCCATGGGCCCCCACCACACCTTGCTCCAGATCCTTTCTaGGGATGGGGTCATCCGAATTCCACTGTTCCACCTCACAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RASHGPPPHLAPDPF*GWGHPNSTVPPHSL Trigger: CAGACTGTGAGGTGGAACAGTGGAATTCGGATGACCCCATCCCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCCCATGGCTTGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151631.2 |
||
| CDS CCA 90 bp | GTTCAGGGGTGGTCACATCCAGTCCCGCTGCTGCAATCTGACCACTaGCTAGTGCCTGGTACAGGTCTTCCTGGTTTACCACATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQGWSHPVPLLQSDH*LVPGTGLPGLPHLL Trigger: GAGGAGATGTGGTAAACCAGGAAGACCTGTACCAGGCACTAGCCAGTGGTCAGATTGCAGCAGCGGGACTGGATGTGACCACCCCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAAGCATCCAGAAGTTTCTaGTCCACACGGTCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGKPPKWQAHLPISRSPEASRSF*STRSER Trigger: CCTCTCTGACCGTGTGGACAAGAAACTTCTGGATGC...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CAA 90 bp | CCCTGGAGCTCCCGACCTGCCATGCACTGTCACATCATGGCACACTGTCACATCGCATCCAGAAGTTTCTaGTCCACACGGTCAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWSSRPAMHCHIMAHCHIASRSF*STRSER Trigger: CCTCTCTGACCGTGTGGACAAGAAACTTCTGGATGC...GATGTGACAGTGTGCCATGATGTGACAGTGCATGGCAGGTCGGGAGCTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151631.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGCAAGCCCCCAAAGTGGCAAGCCCATCTGCCCATTTCCAGGTCCCCTGAATCTCCTCTGCTGATGTaGATGAAGATAGCTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGKPPKWQAHLPISRSPESPLLM*MKIAVF Trigger: GAACACAGCTATCTTCATCAACATCAGCAGAGGAGA...TTCAGGGGACCTGGAAATGGGCAGATGGGCTTGCCACTTTGGGGGCTTGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CAA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGGGCCCCCACCACACCTaGCTCCAGATCCTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMGPHHT*LQILSG Trigger: CCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCC...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CAA 90 bp | CATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCTAGAATTACAGGCTTTTAGGCCAGCCAGCAAGTaGTTAGCCGCCAGCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRPRHCVRSCLMLELQAFRPASK*LAASKD Trigger: GTCCTTGCTGGCGGCTAACAACTTGCTGGCTGGCCT...AAAAGCCTGTAATTCTAGCATTAAACAACTTCTGACACAGTGTCTGGGCCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CAA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGCGGATCCCGCGCTTCTaGATTTCATCCAAAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMRIPRF*ISSKAK Trigger: CTTGGCTTTGGATGAAATCAAGAAGCGCGGGATCCG...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS-3UTR CAA 90 bp | TTTGTTAGTGCCCCAAGTCATAGGCCCAGACACTGTGTCAGAAGTTGTTTAATGTTCTGGAAGAAATCCTaGCTGCAGAGCCCCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FVSAPSHRPRHCVRSCLMFWKKS*LQSPMV Trigger: TACCATGGGGCTCTGCAGCAAGGATTTCTTCCAGAA...CATTAAACAACTTCTGACACAGTGTCTGGGCCTATGACTTGGGGCACTAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 72 bp | TCCGAATTCCACTGTTCCACCTCACAGTCTGCGGCCTaGGCGAGCGCAGCCCTGCCCTCGGCAGGCAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SEFHCSTSQSAA*ASAALPSAGNG Trigger: CCCGTTGCCTGCCGAGGGCAGGGCTGCGCTCGCCCAGGCCGCAGACTGTGAGGTGGAACAGTGGAATTCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151631.2 |
||
| CDS TCA 72 bp | CTTCCTCTATGGCCTCCGGCAACCGGCGGCAGGTGGTaGGGAGGAGGGAGACGGCGAGTTCTGCAGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPLWPPATGGRW*GGGRRRVLQWH Trigger: ATGCCACTGCAGAACTCGCCGTCTCCCTCCTCCTCACCACCTGCCGCCGGTTGCCGGAGGCCATAGAGGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CCA 72 bp | GTTCTTGAGGGTCAGCAGGGGGTGGCTCGGAGGCAGTaGTTCAGGGGTGGTCACATCCAGTCCCGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLEGQQGVARRQ*FRGGHIQSRCC Trigger: GCAGCAGCGGGACTGGATGTGACCACCCCTGAACCACTGCCTCCGAGCCACCCCCTGCTGACCCTCAAGAAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 72 bp | TCAGCAGGGGGTGGCTCGGAGGCAGTGGTTCAGGGGTaGTCACATCCAGTCCCGCTGCTGCAATCTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SAGGGSEAVVQG*SHPVPLLQSDH Trigger: GTGGTCAGATTGCAGCAGCGGGACTGGATGTGACCACCCCTGAACCACTGCCTCCGAGCCACCCCCTGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 72 bp | GGCAGGATCACGCAGTTCTTGAGGGTCAGCAGGGGGTaGCTCGGAGGCAGTGGTTCAGGGGTGGTCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: GRITQFLRVSRG*LGGSGSGVVTS Trigger: GGATGTGACCACCCCTGAACCACTGCCTCCGAGCCACCCCCTGCTGACCCTCAAGAACTGCGTGATCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 72 bp | GACGGCGAGTTCTGCAGTGGCATCTGTCAGGACACCTaGCGTGTAGCCCACCCGGATCCCGCGCTTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DGEFCSGICQDT*RVAHPDPALLD Trigger: ATCAAGAAGCGCGGGATCCGGGTGGGCTACACGCCAGGTGTCCTGACAGATGCCACTGCAGAACTCGCCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CAA 72 bp | TCGACCCCCACAGACAAGGTGCTGATGACTCTGAGGTaGGCTCCCTCGGCAGGCAACGGGCCAGTGACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STPTDKVLMTLR*APSAGNGPVTN Trigger: GTTCGTCACTGGCCCGTTGCCTGCCGAGGGAGCCAACCTCAGAGTCATCAGCACCTTGTCTGTGGGGGTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151148.8 |
||
| CDS TCA 72 bp | CACCTGGCGTGTAGCCCACCCGGATCCCGCGCTTCTTaGTTTCATCCAAAGCCAAGTGGTCGACCCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: HLACSPPGSRAS*FHPKPSGRPPQ Trigger: CTGTGGGGGTCGACCACTTGGCTTTGGATGAAATCAAGAAGCGCGGGATCCGGGTGGGCTACACGCCAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CCA 72 bp | TTGTCCACACGGTCAGAGAGGCGGCAGAGCAAGCCATaGGCCCCCACCACACCTTGCTCCAGATCCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRSERRQSKP*APTTPCSRSFL Trigger: CAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCCCATGGCTTGCTCTGCCGCCTCTCTGACCGTGTGGACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
||
| CDS GCA 72 bp | CCTGACCTATGCGCCCCAGCCCCACAATGCCAACAGTaGTCTGCGAGAGTCCGTAGCCGCACATCCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: PDLCAPAPQCQQ*SARVRSRTSIM Trigger: CATTATGGATGTGCGGCTACGGACTCTCGCAGAGCACTGTTGGCATTGTGGGGCTGGGGCGCATAGGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CAA 90 bp | GCCAAGTGGTCGACCCCCACAGACAAGGTGCTGATGACTCTGAGGTaGGCTCCTGCGGCATCCAGAAGTTTCTTGTCCACACGGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AKWSTPTDKVLMTLR*APAASRSFLSTRSE Trigger: CTCTGACCGTGTGGACAAGAAACTTCTGGATGCCGCAGGAGCCAACCTCAGAGTCATCAGCACCTTGTCTGTGGGGGTCGACCACTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
||
| CDS CCA 72 bp | CATGGGCCCCCACCACACCTTGCTCCAGATCCTTTCTaGGGATGGGGTCATCCGAATTCCACTGTTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HGPPPHLAPDPF*GWGHPNSTVPP Trigger: AGGTGGAACAGTGGAATTCGGATGACCCCATCCCCAGAAAGGATCTGGAGCAAGGTGTGGTGGGGGCCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151631.2 |
||
| CDS CAA 72 bp | ACTCTGAGGTTGGCTCCTGCGGCATCCAGAAGTTTCTaGTCCACACGGTCAGAGAGGCGGCAGAGCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLRLAPAASRSF*STRSERRQSKP Trigger: TGGCTTGCTCTGCCGCCTCTCTGACCGTGTGGACAAGAAACTTCTGGATGCCGCAGGAGCCAACCTCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
||
| CDS CCA 72 bp | CTGGCGCCCCGTGTAAAGAAATCTCTGGACACCGAATaGTTTCAGTCGTCGAGCGATGGCCTGACCTATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRVKKSLDTE*FQSSSDGLTYA Trigger: CGCATAGGTCAGGCCATCGCTCGACGACTGAAACCATTCGGTGTCCAGAGATTTCTTTACACGGGGCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS CCA 72 bp | CCGCCAGCAAGGACATGGTGTTGCGAGTTTTGTAGGTaGCACTGCCAATGTGGGGCAGGATCACGCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPARTWCCEFCR*HCQCGAGSRSS Trigger: AGAACTGCGTGATCCTGCCCCACATTGGCAGTGCCACCTACAAAACTCGCAACACCATGTCCTTGCTGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045078.13 |
||
| CDS CCA 72 bp | CGGATCCCGCGCTTCTTGATTTCATCCAAAGCCAAGTaGTCGACCCCCACAGACAAGGTGCTGATGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RIPRFLISSKAK*STPTDKVLMTL Trigger: CAGAGTCATCAGCACCTTGTCTGTGGGGGTCGACCACTTGGCTTTGGATGAAATCAAGAAGCGCGGGATCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 ENSMUST00000151631.2 |
||
| CDS GCA 72 bp | CACAGACAAGGTGCTGATGACTCTGAGGTTGGCTCCTaGGGCATCCAGAAGTTTCTTGTCCACACGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HRQGADDSEVGS*GIQKFLVHTVR Trigger: TCTGACCGTGTGGACAAGAAACTTCTGGATGCCGCAGGAGCCAACCTCAGAGTCATCAGCACCTTGTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045078.13 ENSMUST00000128973.2 ENSMUST00000151631.2 |
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| CDS CCA 72 bp | CTGATGTTGATGAAGATAGCTGTGTTCTTCATCTTCTaGAAGAAATCCTTGCTGCAGAGCCCCATGGTATCG | + |
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Preference number: 6 (lower is better) Translates to: LMLMKIAVFFIF*KKSLLQSPMVS Trigger: CGATACCATGGGGCTCTGCAGCAAGGATTTCTTCCAGAAGATGAAGAACACAGCTATCTTCATCAACATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045078.13 ENSMUST00000151148.8 |
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