Pregenerated sensors for GRHL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037188Ensembl transcript IDs: ENSMUST00000105855.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTaGGTTCGAGCCTGGGTGGGACATTTAGATCCTGGAACCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: AQTLRWAGCFQEALE*VRAWVGHLDPGTFL Trigger: CAAGAAGGTTCCAGGATCTAAATGTCCCACCCAGGCTCGAACTCACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR GCA 90 bp | TCTGCAGCGGGACTTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTaGTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SAAGLRRESRQLGLC*SDSPVGWVLSGSSG Trigger: TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAAGTCCCGCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR TCA 90 bp | GCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTAACAGCTaGCACAGAAGAGGTTGTACGTGGCTTGAGCCGGGCCCCGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: ACETSFPKKGISSNS*HRRGCTWLEPGPGC Trigger: ACACCCGGGGCCCGGCTCAAGCCACGTACAACCTCTTCTGTGTCAGCTGTTACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 90 bp | TCCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTaGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: SWNLLGLSLAWTSPS*LLARPLSQRKAFQV Trigger: TACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 90 bp | AAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTCTaGTCTGAAGTTGGTAGAAAGGAAACAGTGAACGTCAGAACCGAT | + |
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Preference number: 1 (lower is better) Translates to: KSRVFKLFGQSVRTL*SEVGRKETVNVRTD Trigger: ATCGGTTCTGACGTTCACTGTTTCCTTTCTACCAACTTCAGACCAGAGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCAGGTTGTACGTGGCTTaGGCCGGGCCCCGGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LEPSWSLPGLDITELVACRLYVA*AGPRVW Trigger: CCACACCCGGGGCCCGGCTCAAGCCACGTACAACCT...GCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGGTCTCTCCCTGGCTTaGACATCACCGAGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGGLSLA*TSPSWL Trigger: CAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACC...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTACCGAGTTGGTTGCTTaGGAGACCTCTTTCCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFTELVA*ETSFPK Trigger: CTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGT...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTTTCTTGGTCTCTCCCTaGCTTGGACATCACCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSFLVSP*LGHHRV Trigger: AACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAA...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCATTTCAAGTAACAGCTaGCACAGAAGAGGTTGTACG | + |
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Preference number: 2 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPISSNS*HRRGCT Trigger: CGTACAACCTCTTCTGTGTCAGCTGTTACTTGAAAT...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CAA 90 bp | ATCCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTaGGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILEPSWSLPGLDITE*VACETSFPKKGISS Trigger: ACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CAA 90 bp | TGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTaGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: WNLLGLSLAWTSPSW*LARPLSQRKAFQVT Trigger: TGTTACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTGTACAACAGTAGGTGGCAAGGGTATTTGTTCCTGTCAGCTCGATGATATCCTGGAACCTTCTTaGTCTCTCCCTGGCTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: EMCTTVGGKGICSCQLDDILEPS*SLPGLD Trigger: GTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGAT...ATCATCGAGCTGACAGGAACAAATACCCTTGCCACCTACTGTTGTACACATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGTGTACAACAGTAGGTGGCAAGGGTATTTGTTCCTGTCAGCTCGATGATCCTCACAAAGGCATCTaGTGTGAAAGTCACGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: EMCTTVGGKGICSCQLDDPHKGI*CESHEF Trigger: AAACTCGTGACTTTCACAGCAGATGCCTTTGTGAGG...ATCATCGAGCTGACAGGAACAAATACCCTTGCCACCTACTGTTGTACACATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTGTACAACAGTAGGTGGCAAGGGTATTTGTTCCTGTCAGCTCGATGATAGTTTTCAAGTTATTTaGCCAAAGTGTGAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: EMCTTVGGKGICSCQLDDSFQVI*PKCENS Trigger: AGAGTTCTCACACTTTGGCCAAATAACTTGAAAACT...ATCATCGAGCTGACAGGAACAAATACCCTTGCCACCTACTGTTGTACACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 72 bp | CCTCTGCAGCGGGACTTAGAAGAGAAAGCAGGCAGTTaGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: PLQRDLEEKAGS*VCVAQTLRWAG Trigger: CCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAAGTCCCGCTGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR TCA 72 bp | CTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTaGGTTCGAGCCTGGGTGGGACATTTAGATCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LRWAGCFQEALE*VRAWVGHLDPG Trigger: TCCAGGATCTAAATGTCCCACCCAGGCTCGAACTCACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 72 bp | CAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTaGGTGCTTTCAGGAAGCTCTGGAGTGAGTTCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLGLCCSDSPVG*VLSGSSGVSSS Trigger: GCTCGAACTCACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTGATCCTGGAACCTTCTaGGTCTCTCCCTGGCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFDPGTF*VSPWLG Trigger: TCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGATC...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR GCA 72 bp | GGACTTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTaGTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLRRESRQLGLC*SDSPVGWVLSG Trigger: TCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 72 bp | GGACATTTAGATCCTGGAACCTTCTTGGTCTCTCCCTaGCTTGGACATCACCGAGTTGGTTGCTTGCGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GHLDPGTFLVSP*LGHHRVGCLRD Trigger: GTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGATCTAAATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR GCA 72 bp | TTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTaGTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSPWLGHHRVG*LRDLFPKERHF Trigger: GAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 72 bp | TTTAGATCCTGGAACCTTCTTGGTCTCTCCCTGGCTTaGACATCACCGAGTTGGTTGCTTGCGAGACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: FRSWNLLGLSLA*TSPSWLLARPL Trigger: AAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGATCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR GCA 72 bp | TCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTaGGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: SLPGLDITELVA*ETSFPKKGISS Trigger: ACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR TCA 72 bp | GTTTCCTCTCCAAGGGCCTCACAAAGGCATCTGCTGTaGAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: VSSPRASQRHLL*KSRVFKLFGQS Trigger: ACTTTGGCCAAATAACTTGAAAACTCGTGACTTTCACAGCAGATGCCTTTGTGAGGCCCTTGGAGAGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CCA 72 bp | GTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTCTaGTCTGAAGTTGGTAGAAAGGAAACAGTGAACGTC | + |
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Preference number: 3 (lower is better) Translates to: VFKLFGQSVRTL*SEVGRKETVNV Trigger: GACGTTCACTGTTTCCTTTCTACCAACTTCAGACCAGAGAGTTCTCACACTTTGGCCAAATAACTTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR TCA 72 bp | GAAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTaGGAACTCTCTGGTCTGAAGTTGGTAGAAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: ESHEFSSYLAKV*ELSGLKLVERK Trigger: TTTCCTTTCTACCAACTTCAGACCAGAGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QAVGSVLLRLSGGLGAFRKVLSG*QRCVGG Trigger: TCCACCCACACAGCGCTGGCAGCCAGACAGCACCTT...CCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTGGGCTGCCGGGAATaGCAGTGCCTCCAGAAACGC | + |
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Preference number: 4 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGVGCRE*QCLQKR Trigger: GCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCAC...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGGCAGCCTGTCAGAGCTaGTGTGTCCTGCTGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QAVGSVLLRLSGGLGAFRAACQS*CVLLRG Trigger: TCCCCTCAGCAGGACACAGCAGCTCTGACAGGCTGC...CCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CCA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGCGCTGCTTGGCGGTaGGCTGCCGGGAATGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLRAAWR*AAGNAS Trigger: ACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCG...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCCTGGGGTGCGTAGGGTaGCGGGGTAGAACTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPLGCVG*RGRTDP Trigger: AGGGTCAGTTCTACCCCGTCACCCTACGCACCCCAG...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGTGCTTGGCGGTGGGCTaGCGGGAATGCCAGTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLCLAVG*RECQCL Trigger: GAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCA...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| 3UTR CAA 72 bp | GCCTCTGCAGCGGGACTTAGAAGAGAAAGCAGGCAGTaGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASAAGLRRESRQ*GLCCSDSPVGW Trigger: CCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAAGTCCCGCTGCAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAATTGCCCCTGAAGCCTaGCAGCAGGCAGCCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGIAPEA*QQAALD Trigger: ATCAAGGGCTGCCTGCTGTCAGGCTTCAGGGGCAAT...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTTGGTCTCATTGCCCCTaGAGCCTGACAGCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSWSHCP*SLTAGS Trigger: GCTGCCTGCTGTCAGGCTTCAGGGGCAATGAGACCA...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTGCCGGGAATGCCAGTaGCTCCAGAAACGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETCRECQ*LQKRSC Trigger: GCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCA...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGACAGGCGCTCAGTGCCTaGTCCACAGTCATAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGQALSA*STVIGV Trigger: GACACCTATGACTGTGGAGCAGGCACTGAGCGCCTG...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTGCTGCCAGCGCTGTGTaGGTGGAACCCCATGAATGC | + |
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Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSAASAV*VEPHEC Trigger: GCATTCATGGGGTTCCACCCACACAGCGCTGGCAGC...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETPVGHL*RCCLAA Trigger: GGCAGCCAGACAGCACCTTCAAAGATGACCCACAGG...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGACCATCACCACGCTCTTaGCTTTGCTGGAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGPSPRS*LCWRTE Trigger: CTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGG...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCTCCTCAGCAAAGGGTaGGCAGGTTCGCTTCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFLLSKG*AGSLQR Trigger: CCTCTGAAGCGAACCTGCTCACCCTTTGCTGAGGAG...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCCCGGGGTCTTCAACATaGGCGCGTCAAACACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETPGSST*ARQTPP Trigger: AGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCGG...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR GCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCATTCCGGCCACCAGTaGTGGAGGACAGTATCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFHSGHQ*WRTVSA Trigger: AGCGGATACTGTCCTCCAGCACTGGTGGCCGGAATG...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTCCAGCGCTGTGTGGGTaGAACCCCATGAATGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSPALCG*NPMNAL Trigger: GAGAGCATTCATGGGGTTCCACCCACACAGCGCTGG...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETFEGAV*LPALCG Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR TCA 90 bp | CTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCTCCCCTGCTTTGATGTaGATGGCTTTGGGGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LEPSWSLPGLDITELVACSPALM*MALGEP Trigger: GGGCTCCCCCAAAGCCATTCACATCAAAGCAGGGGA...GCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGGAGGTAGGCCATGGGTaGCTCCCCTGCTTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLEVGHG*LPCFDV Trigger: CACATCAAAGCAGGGGAGTCACCCATGGCCTACCTC...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGTCCTTCAGGATGATCTaGATCTTGCCGTCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAVGSVLLRLSGGLGAFRSFRMI*ILPSSS Trigger: TGAGCTGGACGGCAAGATCCAGATCATCCTGAAGGA...CCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGTGACTCCCCTGCTTTaGTGTGAATGGCTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEPSWSLPGLDITELVACVTPLL*CEWLWG Trigger: CCCCCAAAGCCATTCACATCAAAGCAGGGGAGTCAC...GCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTCTCTCATCATGGCTTTaGTGGCAGCCGTCAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSLSSWL*WQPSKG Trigger: ACCCTTTGACGGCTGCCACCAAAGCCATGATGAGAG...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGATAATCCTCTGGGCATaGGGGGTCCGGGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLIILWA*GVRGCL Trigger: AAGACATCCCCGGACCCCCCATGCCCAGAGGATTAT...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCTCCAGGTCAGTTTCTaGCCGCAAGTATGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFLQVSF*PQVCGL Trigger: GAGACCACATACTTGCGGCCAGAAACTGACCTGGAG...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCCTGGGCGCTGTAGGCTaGAAAAATGCAGATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETLGAVG*KNADWG Trigger: TCCCCAATCTGCATTTTTCCAGCCTACAGCGCCCAG...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| 3UTR CAA 72 bp | CGAGCCTGGGTGGGACATTTAGATCCTGGAACCTTCTaGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAWVGHLDPGTF*VSPWLGHHRVG Trigger: ACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGGATCTAAATGTCCCACCCAGGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | GAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGAGAACTGACCCTTGTTaGGGTAGGCCATGGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: EPSWSLPGLDITELVACERTDPC*GRPWVT Trigger: AGTCACCCATGGCCTACCTCAACAAGGGTCAGTTCT...CTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCTGGTCTGTGTAGTCTaGACTTCCAGACACGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFLVCVV*TSRHVL Trigger: GAGAACGTGTCTGGAAGTCCAGACTACACAGACCAG...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPQKILI*QTARCT Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| 3UTR CAA 72 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTaGGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSWSLPGLDITE*VACETSFPKKG Trigger: GCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTGTGGGTGGAACCCCATaGATGCTCTCAAATAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSVGGTP*MLSNNE Trigger: CTCATTATTTGAGAGCATTCATGGGGTTCCACCCAC...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | GAAATGTGTACAACAGTAGGTGGCAAGGGTATTTGTTCCTGTCAGCTCGATGATGCTGCTGTGTCCTGCTaGGGGGACAACCCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMCTTVGGKGICSCQLDDAAVSC*GDNPSW Trigger: CCAGGAGGGGTTGTCCCCTCAGCAGGACACAGCAGC...ATCATCGAGCTGACAGGAACAAATACCCTTGCCACCTACTGTTGTACACATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTGCCACCTCTTCAATGTaGTGGACCGTGTTGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSATSSM*WTVLKF Trigger: AAACTTCAACACGGTCCAGCACATTGAAGAGGTGGC...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCCAGGATGCCTCGCTTaGATTTCTTGTAGACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFPGCLA*ISCRLC Trigger: GCAAAGTCTACAAGAAATGCAAGCGAGGCATCCTGG...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCGTATCCGCTTCTCCTTaGGACCCATATAGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPVSASP*DPYSSR Trigger: ACGACTACTATATGGGTCCCAAGGAGAAGCGGATAC...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTTCATCATGGCTTTGGTaGCAGCCGTCAAAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEEKAGSWVCVAQTLRWASSWLW*QPSKGS Trigger: AGAACCCTTTGACGGCTGCCACCAAAGCCATGATGA...AGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGAGCAGAGACTCCTGTaGGTCATCTTTGAAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEEKAGSWVCVAQTLRWAEQRLL*VIFEGA Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTC...AGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTACCTCTTCAATGTGCTaGACCGTGTTGAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFTSSMC*TVLKFS Trigger: GGAAAACTTCAACACGGTCCAGCACATTGAAGAGGT...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGATTCAAAGTCACTCTTaGGGCCTGGATAATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLIQSHS*GLDNPL Trigger: CAGAGGATTATCCAGGCCTCAAGAGTGACTTTGAAT...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTATTGTTACTGGAGTCTaGGCACTTGACCTTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LEEKAGSWVCVAQTLRWAIVTGV*ALDLPS Trigger: CGAAGGAAGGTCAAGTGCCCAGACTCCAGTAACAAT...AGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| 3UTR CAA 72 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTaGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSPWLGHHRVGC*RDLFPKERHFK Trigger: CTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAGAAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGCAGATTGTTTTTCTTaGGCTGGTCTGTGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEEKAGSWVCVAQTLRWAADCFS*AGLCSL Trigger: CAGACTACACAGACCAGCTCAAGAAAAACAATCTGC...AGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTTCTCTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTTCTCAAATAATGAGTTaGGGGAGCCATTGTCATATA | + |
|
Preference number: 4 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFSQIMS*GSHCHI Trigger: TATATGACAATGGCTCCCTCAACTCATTATTTGAGA...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCATTTCTTGTAGACTTTaGAAATATTCTCCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSWSLPGLDITELVACETISCRL*KYSPRG Trigger: TCCCCGAGGAGAATATTTGCAAAGTCTACAAGAAAT...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTATATCACAGAAGATCTTaGTCTGGCAGACAGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSWLLARPLSQRKAFQVYHRRS*SGRQHG Trigger: ACCGTGCTGTCTGCCAGATCAAGATCTTCTGTGATA...TACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTATACAACAGAACTCTCTaGAGGTCATCTTCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSWLLARPLSQRKAFQVYNRTL*RSSSLA Trigger: AGCCAAGGAAGATGACCTTCAGAGAGTTCTGTTGTA...TACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGTGAAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTCCTTGGCTTCCTCGTTaGCATTCCACACAAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SAVKVTSFQVIWPKCENSPWLPR*HSTQRT Trigger: TGTCCTTTGTGTGGAATGTCAACGAGGAAGCCAAGG...AGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTTTCACAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGTGAAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTAGAGGTAGCTGTCCATaGAGCTGGCTTCCAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVKVTSFQVIWPKCENSRGSCP*SWLPVY Trigger: GTAAACTGGAAGCCAGCTCCATGGACAGCTACCTCT...AGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTTTCACAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGTGAAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTCTGTCAAAAATTTCATaGGGTGTGTGGGGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVKVTSFQVIWPKCENSLSKIS*GVWGSR Trigger: TCGAGAGCCCCACACACCTCATGAAATTTTTGACAG...AGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTTTCACAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR GCA 90 bp | TCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCAAAGAAAGGCATTTCAAGTATGTAGGCTGGAAAAATaGAGATTGGGGATAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSWLLARPLSQRKAFQVCRLEK*RLGINN Trigger: GTTGTTTATCCCCAATCTGCATTTTTCCAGCCTACA...TACTTGAAATGCCTTTCTTTGGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | TCAGCTACGTCGATGACGCGCTGCTTGGCGGTGGGCTGCCGGGAATaGCAGTGCCTCCAGAAACGCAGCTGCTCCACGGGGACCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SATSMTRCLAVGCRE*QCLQKRSCSTGTLS Trigger: TGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGTAGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | TCCTTACAGTCAGCTACGTCGATGACGCGCTGCTTGGCGGTGGGCTaGCGGGAATGCCAGTGCCTCCAGAAACGCAGCTGCTCCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQSATSMTRCLAVG*RECQCLQKRSCSTG Trigger: CCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGTAGCTGACTGTAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | ACGTCGATGACGCGCTGCTTGGCGGTGGGCTGCCGGGAATGCCAGTaGCTCCAGAAACGCAGCTGCTCCACGGGGACCTTGTCATTATCG | + |
|
Preference number: 5 (lower is better) Translates to: TSMTRCLAVGCRECQ*LQKRSCSTGTLSLS Trigger: CGATAATGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | CAGCAAAGGGTGAGCAGGTTCGCTTCAGAGGCAGCCTGTCAGAGCTaGTGTGTCCTGCTGAGGGGACAACCCCTCCTGGGCGCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QQRVSRFASEAACQS*CVLLRGQPLLGAVG Trigger: GCCTACAGCGCCCAGGAGGGGTTGTCCCCTCAGCAGGACACAGCAGCTCTGACAGGCTGCCTCTGAAGCGAACCTGCTCACCCTTTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | TTGGCGGTGGGCTGCCGGGAATGCCAGTGCCTCCAGAAACGCAGCTaGTCCACGGGGACCTTGTCATTATCGAACACGACCATCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: LAVGCRECQCLQKRS*STGTLSLSNTTITT Trigger: CGTGGTGATGGTCGTGTTCGATAATGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS TCA 90 bp | CCACGGGGACCTTGTCATTATCGAACACGACCATCACCACGCTCTTaGCTTTGCTGGAGGACAGAGCGAGGCCTTTCCCTCCTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRGPCHYRTRPSPRS*LCWRTERGLSLLLG Trigger: CCCCAGCAGGAGGGAAAGGCCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGGTCCCCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCACCACGCTCTTGACTTaGCTGGAGGACAGAGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPTTLLT*LEDRAR Trigger: CCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGT...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CCA 90 bp | GTCCGGGGATGTCTTCAGAATATCAGGGAAGAGCAGAGACTCCTGTaGGTCATCTTTGAAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRGCLQNIREEQRLL*VIFEGAVWLPALCG Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCTGATATTCTGAAGACATCCCCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTAGGATGATCTGGATCTaGCCGTCCAGCTCACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSRMIWI*PSSSPM Trigger: CATGGGTGAGCTGGACGGCAAGATCCAGATCATCCT...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CCA 90 bp | AGGGAAGAGCAGAGACTCCTGTGGGTCATCTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGGTGGAACCCCATGAATGCTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: REEQRLLWVIFEGAV*LPALCGWNPMNALK Trigger: TTTGAGAGCATTCATGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCACTCTCATCATGGCTTaGGTGGCAGCCGTCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEPSWSLPGLDITELVACTLIMA*VAAVKG Trigger: CCCTTTGACGGCTGCCACCAAAGCCATGATGAGAGT...GCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLSCGSS*KVLSGC Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTACCATCACCACGCTCTaGACTTTGCTGGAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSTITTL*TLLEDR Trigger: TCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGT...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAACCTTGGCTTCCTCGTaGACATTCCACACAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGTLASS*TFHTKD Trigger: GTCCTTTGTGTGGAATGTCAACGAGGAAGCCAAGGT...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTCCCTTGATTCCTGCATaGTTACTGGAGTCTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSPLIPA*LLESGH Trigger: GTGCCCAGACTCCAGTAACAATGCAGGAATCAAGGG...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTAAGTATGTGGTCTCATaGCCCCTGAAGCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFKYVVS*PLKPDS Trigger: GCTGTCAGGCTTCAGGGGCAATGAGACCACATACTT...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 90 bp | TCTTCAGAATATCAGGGAAGAGCAGAGACTCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGTGGAACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSEYQGRAETPVGHL*RCCLAASAVWVEPH Trigger: ATGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCTGATATTCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 90 bp | GTCAGTTTCTGGCCGCAAGTATGTGGTCTCATTGCCCCTGAAGCCTaGCAGCAGGCAGCCCTTGATTCCTGCATTGTTACTGGAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSFWPQVCGLIAPEA*QQAALDSCIVTGVW Trigger: CCAGACTCCAGTAACAATGCAGGAATCAAGGGCTGCCTGCTGTCAGGCTTCAGGGGCAATGAGACCACATACTTGCGGCCAGAAACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 90 bp | CTTGGCTTGTTTAGAAGGAAGAGGCTCAAACTCCTCAGCAAAGGGTaGGCAGGTTCGCTTCAGAGGCAGCCTGTCAGAGCTGCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLFRRKRLKLLSKG*AGSLQRQPVRAAVS Trigger: GGACACAGCAGCTCTGACAGGCTGCCTCTGAAGCGAACCTGCTCACCCTTTGCTGAGGAGTTTGAGCCTCTTCCTTCTAAACAAGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCTCTTTCCCGAGTTGAGGGAGCCATaGTCATATATGTCACTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSPWLGHHRVGCLRDLFPELREP*SYMSLA Trigger: CGCCAGTGACATATATGACAATGGCTCCCTCAACTC...GGGAAAGAGGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGATCTGTGCTCAGACAGTaGACACCGATAAACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGSVLRQ*TPINTL Trigger: CAAGGTGTTTATCGGTGTCAACTGTCTGAGCACAGA...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | CCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCGAGACCGTCATAGGTGTCAATTaGCAAGTTCAGGGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: PSWSLPGLDITELVACETVIGVN*QVQGDT Trigger: GGTGTCCCCCTGAACTTGCAAATTGACACCTATGAC...GGTCTCGCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGATCCAAGCCTAGCAGATaGTTTTTCTTGAGCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLCCSDSPVGWVLSGSSGSKPSR*FFLSWS Trigger: AGACCAGCTCAAGAAAAACAATCTGCTAGGCTTGGA...TCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTGTCATCTTCCTTGGCTaGTTTAGAAGGAAGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSVIFLG*FRRKRL Trigger: GAGCCTCTTCCTTCTAAACAAGCCAAGGAAGATGAC...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | CCATGCTGTGGTAGAACTTCTTTCCTTGGTCATTCCGGCCACCAGTaGTGGAGGACAGTATCCGCTTCTCCTTGGGACCCATATAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PCCGRTSFLGHSGHQ*WRTVSASPWDPYSS Trigger: ACTACTATATGGGTCCCAAGGAGAAGCGGATACTGTCCTCCAGCACTGGTGGCCGGAATGACCAAGGAAAGAAGTTCTACCACAGCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | TCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTCAGGAAGCTCTGGAGTATGTGCTGGACCGTGTaGAAGTTTTCCTTACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLLRLSGGLGAFRKLWSMCWTV*KFSLQS Trigger: TGACTGTAAGGAAAACTTCAACACGGTCCAGCACAT...ACTCCAGAGCTTCCTGAAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS TCA 90 bp | AGCGCTGTGTGGGTGGAACCCCATGAATGCTCTCAAATAATGAGTTaGGGGAGCCATTGTCATATATGTCACTGGCGGGCAAGAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAVWVEPHECSQIMS*GSHCHICHWRARGS Trigger: GCTACCTCTTGCCCGCCAGTGACATATATGACAATGGCTCCCTCAACTCATTATTTGAGAGCATTCATGGGGTTCCACCCACACAGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS GCA 90 bp | CCTGCATTGTTACTGGAGTCTGGGCACTTGACCTTCCTTCGAAACTaGTTCCGTTCATCATCGCGCATCTTCCTCTCAGCTCCCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PALLLESGHLTFLRN*FRSSSRIFLSAPLS Trigger: TGATAAGGGAGCTGAGAGGAAGATGCGCGATGATGAACGGAAGCAGTTTCGAAGGAAGGTCAAGTGCCCAGACTCCAGTAACAATGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CCA 90 bp | CGCTGTAGGCTGGAAAAATGCAGATTGGGGATAAACAACACAGGCTaGGTCTCCAGGTCAGTTTCTGGCCGCAAGTATGTGGTCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RCRLEKCRLGINNTG*VSRSVSGRKYVVSL Trigger: CAATGAGACCACATACTTGCGGCCAGAAACTGACCTGGAGACCCAGCCTGTGTTGTTTATCCCCAATCTGCATTTTTCCAGCCTACAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCTGGAAAAATGCAGATaGGGGATAAACAACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTFLVSPWLGHHRVGCLLEKCR*GINNTG Trigger: GCCTGTGTTGTTTATCCCCAATCTGCATTTTTCCAG...CAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAGGCAGTTGGGTCTGTGTTGCTCAGACTCTCCGGTGGGCTGGGTGCTTTTGTTGGATGATGTTGTaGTCCATGTTAACCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KAGSWVCVAQTLRWAGCFCWMML*SMLTRM Trigger: CATCCTGGTTAACATGGACAACAACATCATCCAACA...AAAGCACCCAGCCCACCGGAGAGTCTGAGCAACACAGACCCAACTGCCTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 90 bp | TTGAAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGTGGAACCCCATaGATGCTCTCAAATAATGAGTTGAGGGAGCCATTGTCATATATG | + |
|
Preference number: 5 (lower is better) Translates to: LKVLSGCQRCVGGTP*MLSNNELREPLSYM Trigger: CATATATGACAATGGCTCCCTCAACTCATTATTTGAGAGCATTCATGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | CTGGAACCTTCTTGGTCTCTCCCTGGCTTGGACATCACCGAGTTGGTTGCTTGCCTCTCAAATAATGAGTaGAGGGAGCCATTGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LEPSWSLPGLDITELVACLSNNE*REPLSY Trigger: ATATGACAATGGCTCCCTCAACTCATTATTTGAGAG...GCAAGCAACCAACTCGGTGATGTCCAAGCCAGGGAGAGACCAAGAAGGTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGTGTACAACAGTAGGTGGCAAGGGTATTTGTTCCTGTCAGCTCGATGATTTATCACAGAAGATCTaGATCTGGCAGACAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: EMCTTVGGKGICSCQLDDLSQKI*IWQTAR Trigger: CCGTGCTGTCTGCCAGATCAAGATCTTCTGTGATAA...ATCATCGAGCTGACAGGAACAAATACCCTTGCCACCTACTGTTGTACACATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTGTGAAAGTCACGAGTTTTCAAGTTATTTGGCCAAAGTGTGAGAACTCTGACAGCAGGCAGCCCTaGATTCCTGCATTGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVKVTSFQVIWPKCENSDSRQP*IPALLL Trigger: CAGTAACAATGCAGGAATCAAGGGCTGCCTGCTGTC...AGAGTTCTCACACTTTGGCCAAATAACTTGAAAACTCGTGACTTTCACAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | ACGCGCTGCTTGGCGGTGGGCTGCCGGGAATGCCAGTaGCTCCAGAAACGCAGCTGCTCCACGGGGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRCLAVGCRECQ*LQKRSCSTGTL Trigger: CAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | TCGATGACGCGCTGCTTGGCGGTGGGCTGCCGGGAATaGCAGTGCCTCCAGAAACGCAGCTGCTCCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SMTRCLAVGCRE*QCLQKRSCSTG Trigger: CCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | TCAGCTACGTCGATGACGCGCTGCTTGGCGGTGGGCTaGCGGGAATGCCAGTGCCTCCAGAAACGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SATSMTRCLAVG*RECQCLQKRSC Trigger: GCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGTAGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | GTGAGCAGGTTCGCTTCAGAGGCAGCCTGTCAGAGCTaGTGTGTCCTGCTGAGGGGACAACCCCTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRFASEAACQS*CVLLRGQPLLG Trigger: GCCCAGGAGGGGTTGTCCCCTCAGCAGGACACAGCAGCTCTGACAGGCTGCCTCTGAAGCGAACCTGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | GGCTGCCGGGAATGCCAGTGCCTCCAGAAACGCAGCTaGTCCACGGGGACCTTGTCATTATCGAACACGACC | + |
|
Preference number: 6 (lower is better) Translates to: GCRECQCLQKRS*STGTLSLSNTT Trigger: GGTCGTGTTCGATAATGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCGGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 72 bp | TTTTCCTTACAGTCAGCTACGTCGATGACGCGCTGCTaGGCGGTGGGCTGCCGGGAATGCCAGTGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLQSATSMTRC*AVGCRECQCLQ Trigger: CTGGAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGTAGCTGACTGTAAGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | AAGTTTTCCTTACAGTCAGCTACGTCGATGACGCGCTaGTTGGCGGTGGGCTGCCGGGAATGCCAGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KFSLQSATSMTR*LAVGCRECQCL Trigger: GAGGCACTGGCATTCCCGGCAGCCCACCGCCAAGCAGCGCGTCATCGACGTAGCTGACTGTAAGGAAAACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | TCCACGGGGACCTTGTCATTATCGAACACGACCATCACCACGCTCTaGACTTTGCTGGAGGACAGAGCGAGGCCTTTCCCTCCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: STGTLSLSNTTITTL*TLLEDRARPFPPAG Trigger: CCCAGCAGGAGGGAAAGGCCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGGTCCCCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | GGCTGGGTCTCCAGGTCAGTTTCTGGCCGCAAGTATGTGGTCTCATaGCCCCTGAAGCCTGACAGCAGGCAGCCCTTGATTCCTGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: GWVSRSVSGRKYVVS*PLKPDSRQPLIPAL Trigger: CAATGCAGGAATCAAGGGCTGCCTGCTGTCAGGCTTCAGGGGCAATGAGACCACATACTTGCGGCCAGAAACTGACCTGGAGACCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | CGGGAATGCCAGTGCCTCCAGAAACGCAGCTGCTCCACGGGGACCTaGTCATTATCGAACACGACCATCACCACGCTCTTGACTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RECQCLQKRSCSTGT*SLSNTTITTLLTLL Trigger: CAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTGGCATTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 72 bp | TATCAGGGAAGAGCAGAGACTCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YQGRAETPVGHL*RCCLAASAVWV Trigger: CACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCTGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CCA 72 bp | CAGAGACTCCTGTGGGTCATCTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGGTGGAACCCCATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QRLLWVIFEGAV*LPALCGWNPMN Trigger: ATTCATGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 72 bp | CAGTGCCTCCAGAAACGCAGCTGCTCCACGGGGACCTaGTCATTATCGAACACGACCATCACCACGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QCLQKRSCSTGT*SLSNTTITTLL Trigger: CAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGGTCCCCGTGGAGCAGCTGCGTTTCTGGAGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | GTCTTCAGAATATCAGGGAAGAGCAGAGACTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGTGGAACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VFRISGKSRDSCGSS*KVLSGCQRCVGGTP Trigger: TGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCTGATATTCTGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | GGTAGAACTTCTTTCCTTGGTCATTCCGGCCACCAGTaGTGGAGGACAGTATCCGCTTCTCCTTGGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRTSFLGHSGHQ*WRTVSASPWDP Trigger: TGGGTCCCAAGGAGAAGCGGATACTGTCCTCCAGCACTGGTGGCCGGAATGACCAAGGAAAGAAGTTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CCA 72 bp | GGCCACCAGTGCTGGAGGACAGTATCCGCTTCTCCTTaGGACCCATATAGTAGTCGTAGAGGAAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHQCWRTVSASP*DPYSSRRGSSE Trigger: CTCTGAGCTTCCTCTACGACTACTATATGGGTCCCAAGGAGAAGCGGATACTGTCCTCCAGCACTGGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | GGCAAGATCCGGCTCATAGTCCATGCTGTGGTAGAACTTCTTTCCTaGGTCATTCCGGCCACCAGTGCTGGAGGACAGTATCCGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKIRLIVHAVVELLS*VIPATSAGGQYPLL Trigger: GAGAAGCGGATACTGTCCTCCAGCACTGGTGGCCGGAATGACCAAGGAAAGAAGTTCTACCACAGCATGGACTATGAGCCGGATCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 72 bp | CTGTCTGGCTGCCAGCGCTGTGTGGGTGGAACCCCATaGATGCTCTCAAATAATGAGTTGAGGGAGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGCQRCVGGTP*MLSNNELREPL Trigger: CAATGGCTCCCTCAACTCATTATTTGAGAGCATTCATGGGGTTCCACCCACACAGCGCTGGCAGCCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS TCA 72 bp | CCTTGTCATTATCGAACACGACCATCACCACGCTCTTaGCTTTGCTGGAGGACAGAGCGAGGCCTTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PCHYRTRPSPRS*LCWRTERGLSL Trigger: GAGGGAAAGGCCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS TCA 72 bp | GCATCTTCCTCTCAGCTCCCTTATCACAGAAGATCTTaGTCTGGCAGACAGCACGGTGTACCAGGCGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSQLPYHRRS*SGRQHGVPGAQ Trigger: CTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTGTGATAAGGGAGCTGAGAGGAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 72 bp | TGGCCGCAAGTATGTGGTCTCATTGCCCCTGAAGCCTaGCAGCAGGCAGCCCTTGATTCCTGCATTGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: WPQVCGLIAPEA*QQAALDSCIVT Trigger: AGTAACAATGCAGGAATCAAGGGCTGCCTGCTGTCAGGCTTCAGGGGCAATGAGACCACATACTTGCGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CCA 72 bp | TTCCTCTCAGCTCCCTTATCACAGAAGATCTTGATCTaGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FLSAPLSQKILI*QTARCTRRSVP Trigger: AGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTGTGATAAGGGAGCTGAGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CCA 72 bp | GATAAACAACACAGGCTGGGTCTCCAGGTCAGTTTCTaGCCGCAAGTATGTGGTCTCATTGCCCCTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DKQHRLGLQVSF*PQVCGLIAPEA Trigger: GGCTTCAGGGGCAATGAGACCACATACTTGCGGCCAGAAACTGACCTGGAGACCCAGCCTGTGTTGTTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CAA 72 bp | TCATTATCGAACACGACCATCACCACGCTCTTGACTTaGCTGGAGGACAGAGCGAGGCCTTTCCCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSNTTITTLLT*LEDRARPFPPA Trigger: AGCAGGAGGGAAAGGCCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CAA 72 bp | CGCATCTTCCTCTCAGCTCCCTTATCACAGAAGATCTaGATCTGGCAGACAGCACGGTGTACCAGGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RIFLSAPLSQKI*IWQTARCTRRS Trigger: TGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTGTGATAAGGGAGCTGAGAGGAAGATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS TCA 72 bp | TTTAGAAGGAAGAGGCTCAAACTCCTCAGCAAAGGGTaGGCAGGTTCGCTTCAGAGGCAGCCTGTCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FRRKRLKLLSKG*AGSLQRQPVRA Trigger: AGCTCTGACAGGCTGCCTCTGAAGCGAACCTGCTCACCCTTTGCTGAGGAGTTTGAGCCTCTTCCTTCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CCA 72 bp | TGTCTTCAGAATATCAGGGAAGAGCAGAGACTCCTGTaGGTCATCTTTGAAGGTGCTGTCTGGCTGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CLQNIREEQRLL*VIFEGAVWLPA Trigger: CGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCTCTGCTCTTCCCTGATATTCTGAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CCA 72 bp | CAGGCAGCCCTTGATTCCTGCATTGTTACTGGAGTCTaGGCACTTGACCTTCCTTCGAAACTGCTTCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QAALDSCIVTGV*ALDLPSKLLPF Trigger: GAACGGAAGCAGTTTCGAAGGAAGGTCAAGTGCCCAGACTCCAGTAACAATGCAGGAATCAAGGGCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
||
| CDS CAA 72 bp | CGGCTCATAGTCCATGCTGTGGTAGAACTTCTTTCCTaGGTCATTCCGGCCACCAGTGCTGGAGGACAGTAT | + |
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Preference number: 6 (lower is better) Translates to: RLIVHAVVELLS*VIPATSAGGQY Trigger: ATACTGTCCTCCAGCACTGGTGGCCGGAATGACCAAGGAAAGAAGTTCTACCACAGCATGGACTATGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 72 bp | ACCTTGTCATTATCGAACACGACCATCACCACGCTCTaGACTTTGCTGGAGGACAGAGCGAGGCCTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLSLSNTTITTL*TLLEDRARPFP Trigger: AGGGAAAGGCCTCGCTCTGTCCTCCAGCAAAGTCAAGAGCGTGGTGATGGTCGTGTTCGATAATGACAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 90 bp | AGCAGGCAGCCCTTGATTCCTGCATTGTTACTGGAGTCTGGGCACTaGACCTTCCTTCGAAACTGCTTCCGTTCATCATCGCGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRQPLIPALLLESGH*TFLRNCFRSSSRIF Trigger: GAAGATGCGCGATGATGAACGGAAGCAGTTTCGAAGGAAGGTCAAGTGCCCAGACTCCAGTAACAATGCAGGAATCAAGGGCTGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS GCA 72 bp | TTACTGGAGTCTGGGCACTTGACCTTCCTTCGAAACTaGTTCCGTTCATCATCGCGCATCTTCCTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLESGHLTFLRN*FRSSSRIFLSA Trigger: AGCTGAGAGGAAGATGCGCGATGATGAACGGAAGCAGTTTCGAAGGAAGGTCAAGTGCCCAGACTCCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CCA 72 bp | CTGGAAAAATGCAGATTGGGGATAAACAACACAGGCTaGGTCTCCAGGTCAGTTTCTGGCCGCAAGTATGTG | + |
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Preference number: 6 (lower is better) Translates to: LEKCRLGINNTG*VSRSVSGRKYV Trigger: CACATACTTGCGGCCAGAAACTGACCTGGAGACCCAGCCTGTGTTGTTTATCCCCAATCTGCATTTTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS CAA 72 bp | CCCTTGATTCCTGCATTGTTACTGGAGTCTGGGCACTaGACCTTCCTTCGAAACTGCTTCCGTTCATCATCG | + |
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Preference number: 6 (lower is better) Translates to: PLIPALLLESGH*TFLRNCFRSSS Trigger: CGATGATGAACGGAAGCAGTTTCGAAGGAAGGTCAAGTGCCCAGACTCCAGTAACAATGCAGGAATCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 72 bp | TGGGTGGAACCCCATGAATGCTCTCAAATAATGAGTTaGGGGAGCCATTGTCATATATGTCACTGGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WVEPHECSQIMS*GSHCHICHWRA Trigger: TGCCCGCCAGTGACATATATGACAATGGCTCCCTCAACTCATTATTTGAGAGCATTCATGGGGTTCCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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| CDS TCA 72 bp | TCCTCTGTCTCCCTCCTCACATACAACAGAACTCTCTaGAGGTCATCTTCCTTGGCTTGTTTAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSVSLLTYNRTL*RSSSLACLEGR Trigger: TCTTCCTTCTAAACAAGCCAAGGAAGATGACCTTCAGAGAGTTCTGTTGTATGTGAGGAGGGAGACAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105855.2 |
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