Pregenerated sensors for GRHL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020656Ensembl transcript IDs: ENSMUST00000020985.9, ENSMUST00000085553.13
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAAACATGGCCTTGTAGAATCGGCCCATTTTGGTTTGTATCGCTaGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LKHGLVESAHFGLYR*LMTTAESLHGHSWL Trigger: CAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATACAAACCAAAATGGGCCGATTCTACAAGGCCATGTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCTTAGCCCTTTATTGCTaGGGGCTGGGCCCACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KAVHMSKEVAREGSSNAPLALYC*GLGPLL Trigger: GAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAA...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACAAGCCCACCACTCTTATaGACACAGGCAGACTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: YRWLMTTAESLHGHSWLTSPPLL*TQADFD Trigger: GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCT...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR GCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTGTTCTGCAGGGTAGGTaGCTGGGCTTCTCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HTPHIVAAVQSSISSTQGVLQGR*LGFSAG Trigger: TCCAGCTGAGAAGCCCAGGCACCTACCCTGCAGAAC...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACGCGCCATTTCCTACGTaGAAGGTTCCTTCCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: QEQMALPHEMAFCYAREHAPFPT*KVPSLI Trigger: TATCAGGGAAGGAACCTTTCACGTAGGAAATGGCGC...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGGCGCCATTTCCTACGTaGAAGGTTCCTTCCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: TVTTFARADGSATRDGFLAPFPT*KVPSLI Trigger: TATCAGGGAAGGAACCTTTCACGTAGGAAATGGCGC...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGAAAGGTTCCTTCCCTaGTATTTAAGGTTCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RREHKSLKDKLLPSPLSPERFLP*YLRFCR Trigger: CCTGCAGAACCTTAAATATCAGGGAAGGAACCTTTC...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTTTAGCCCTTTATTGCTaGGGGCTGGGCCCACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LPQLCKFMNAFQFKHTVALALYC*GLGPLL Trigger: GAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAA...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATGTTCTGCAGGGTAGGTaGCTGGGCTTCTCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TCLFLGKQRSTCLVHIINVLQGR*LGFSAG Trigger: TCCAGCTGAGAAGCCCAGGCACCTACCCTGCAGAAC...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGCTATTTAGTAAACACTaGAGGAGAGGTGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRLFSKH*RRGGGR Trigger: TCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAG...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | TGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACGGACACAGGCAGACTTTaGCAGGTAGTGGAGCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: CTYIQRSFNRANFTLSLTDTGRL*QVVEQV Trigger: TACCTGCTCCACTACCTGTCAAAGTCTGCCTGTGTC...CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTCCTGGGCTTCTCAGCTaGAACACTTTCACTGAATTC | + |
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Preference number: 2 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIPGLLS*NTFTEF Trigger: GAATTCAGTGAAAGTGTTCCAGCTGAGAAGCCCAGG...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATTTTATTGCTGAGGGCTaGGCCCACTCCTCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TCLFLGKQRSTCLVHIINFIAEG*AHSSRQ Trigger: CTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAA...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTGAAAGGTTCCTTCCCTaGTATTTAAGGTTCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIERFLP*YLRFCR Trigger: CCTGCAGAACCTTAAATATCAGGGAAGGAACCTTTC...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACAGCGTTCTACCTGCTTaGTCCACATTATCAATAATA | + |
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Preference number: 2 (lower is better) Translates to: QEQMALPHEMAFCYAREHSVLPA*STLSII Trigger: TATTATTGATAATGTGGACCAAGCAGGTAGAACGCT...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTACTGCATGGGCACAGCTaGCTGACACCTGCACACACA | + |
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Preference number: 2 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLLHGHS*LTPAHT Trigger: TGTGTGTGCAGGTGTCAGCCAGCTGTGCCCATGCAG...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTATGTATCGCTGGCTCATaGCAACGGCTGAGTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLCIAGS*QRLSLC Trigger: GCAGAGACTCAGCCGTTGTCATGAGCCAGCGATACA...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAAAGCCCACCACTCTTATaGACACAGGCAGACTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKSPPLL*TQADFD Trigger: GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCT...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACCTGGGCTTCTCAGCTaGAACACTTTCACTGAATTC | + |
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Preference number: 2 (lower is better) Translates to: IALIYNAALTELTSHCHSPGLLS*NTFTEF Trigger: GAATTCAGTGAAAGTGTTCCAGCTGAGAAGCCCAGG...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCCTATTTAGTAAACACTaGAGGAGAGGTGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YCTYIQRSFNRANFTLSLLFSKH*RRGGGR Trigger: TCTCCCTCCACCTCTCCTCCAGTGTTTACTAAATAG...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAAAGCGTTCTACCTGCTTaGTCCACATTATCAATAATA | + |
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Preference number: 2 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKSVLPA*STLSII Trigger: TATTATTGATAATGTGGACCAAGCAGGTAGAACGCT...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTAACACTTGCTTGTTTTTaGGAAAACAGCGTTCTACCT | + |
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Preference number: 2 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLTLACF*ENSVLP Trigger: AGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGT...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR TCA 72 bp | GGAGAGGTGGAGGGAGAAGGCTTAGCCCTTTATTGCTaGGGGCTGGGCCCACTCCTCAAGGCAGTCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: GEVEGEGLALYC*GLGPLLKAVRV Trigger: AACTCTGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAAGCCTTCTCCCTCCACCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR CCA 72 bp | CTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTaGCTGACACCTGCACACACACCTCATATAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: LMTTAESLHGHS*LTPAHTPHIVA Trigger: AGCTACTATATGAGGTGTGTGTGCAGGTGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR GCA 72 bp | GTTCCTTCCCTGATATTTAAGGTTCTGCAGGGTAGGTaGCTGGGCTTCTCAGCTGGAACACTTTCACTGAAT | + |
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Preference number: 3 (lower is better) Translates to: VPSLIFKVLQGR*LGFSAGTLSLN Trigger: ATTCAGTGAAAGTGTTCCAGCTGAGAAGCCCAGGCACCTACCCTGCAGAACCTTAAATATCAGGGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CAA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCAAGGCTTAGCCCTTTATaGCTGAGGGCTGGGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: IALIYNAALTELTSHCHSRLSPL*LRAGPT Trigger: AGTGGGCCCAGCCCTCAGCAATAAAGGGCTAAGCCT...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CAA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGTATGCTAGGGAACACTaGCTTGTTTTTGGGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: TVTTFARADGSATRDGFLYAREH*LVFGKT Trigger: TGTTTTCCCAAAAACAAGCAAGTGTTCCCTAGCATA...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR GCA 72 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTaGTATGCTAGGGAACACTTGCTTGTTTTTGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QEQMALPHEMAF*YAREHLLVFGK Trigger: TTTCCCAAAAACAAGCAAGTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR TCA 72 bp | ATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTaGTGCTTGGAAGCTCTGAAACATGGCCTTGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: IHECLPVQTHGS*CLEALKHGLVE Trigger: TTCTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CAA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAAACATGTCCAAGGAAGTaGCACGGGAAGGTTCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKTCPRK*HGKVPV Trigger: TACTGGAACCTTCCCGTGCAACTTCCTTGGACATGT...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CAA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCAACATGTCCAAGGAAGTaGCACGGGAAGGTTCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: IALIYNAALTELTSHCHSTCPRK*HGKVPV Trigger: TACTGGAACCTTCCCGTGCAACTTCCTTGGACATGT...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTACTAGGGAACACTTGCTaGTTTTTGGGAAAACAGCGT | + |
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Preference number: 3 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLLGNTC*FLGKQR Trigger: ACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCCTAG...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR GCA 72 bp | AACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTaGTTGGTCCACATTATCAATAATAACTTAACCTCT | + |
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Preference number: 3 (lower is better) Translates to: NTCLFLGKQRST*LVHIINNNLTS Trigger: AGAGGTTAAGTTATTATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| 3UTR CAA 72 bp | TGGAGGAGAGGTGGAGGGAGAAGGCTTAGCCCTTTATaGCTGAGGGCTGGGCCCACTCCTCAAGGCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: WRRGGGRRLSPL*LRAGPTPQGSQ Trigger: CTGACTGCCTTGAGGAGTGGGCCCAGCCCTCAGCAATAAAGGGCTAAGCCTTCTCCCTCCACCTCTCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR GCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACACAATGCCCAGCTGGTTaGTATGGGGGAGGACGATGT | + |
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Preference number: 4 (lower is better) Translates to: YRWLMTTAESLHGHSWLTQCPAG*YGGGRC Trigger: ACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTG...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR GCA 90 bp | CCTCTCTCGCCAGCCAGTAGCCCACCACTCTTATGGACACAGGCAGACTTTGACCCCACAGCAAAGCCGTaGGGCTGGATTTCTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PLSPASSPPLLWTQADFDPTAKP*GWISVL Trigger: CAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGG...GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR GCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACACCGGCTTCCTCTATCTaGAGCTGGAAGGTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: YRWLMTTAESLHGHSWLTPASSI*SWKVSS Trigger: TGAGGACACCTTCCAGCTGCAGATAGAGGAAGCCGG...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR CCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACACCCAGCTGGTTGCTATaGGGGAGGACGATGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: YRWLMTTAESLHGHSWLTPSWLL*GRTMLK Trigger: CTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGG...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCGCCAGCCAGTAGCCCACCACTCTTATGGACACAGGCAGACTTTGACTTTCTCCAGCAGAAATaGGGGGCTGCTCCGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: PLSPASSPPLLWTQADFDFLQQK*GAAPSH Trigger: ATGTGACGGAGCAGCCCCTCATTTCTGCTGGAGAAA...GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCGCCAGCCAGTAGCCCACCACTCTTATGGACACAGGCAGACTTTGACAATGCACGTCCGGAATaGAGAGGACAGGCTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PLSPASSPPLLWTQADFDNARPE*RGQAEC Trigger: ACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATT...GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR TCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTAGGGAGGGAAAGAACATaGCTGCCCCGCTGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVGRERT*LPRCRL Trigger: CAACCTGCAGCGGGGCAGTCATGTTCTTTCCCTCCC...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR CCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCTCGGTGGGCTCAGAGTaGTACACGGCTGGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPSVGSE*YTAGGI Trigger: AATCCCACCAGCCGTGTACCACTCTGAGCCCACCGA...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR CCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACATCTGCCGCAGTGACTTaGAGGCTTCCAGGGTATACT | + |
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Preference number: 4 (lower is better) Translates to: YRWLMTTAESLHGHSWLTSAAVT*RLPGYT Trigger: AGTATACCCTGGAAGCCTCCAAGTCACTGCGGCAGA...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS-3UTR TCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCGGGAAGAAAACCTCCTaGACGCCCTCCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPGKKTS*TPSLKV Trigger: GACCTTCAAGGAGGGCGTTCAGGAGGTTTTCTTCCC...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTACCGGCATCCGAAGGCTaGGTTCCGAGGGGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVPASEG*VPRGRK Trigger: TTTTCTTCCCCTCGGAACTCAGCCTTCGGATGCCGG...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCATGAAGAGGACAGGCTaGGTGTCGAGGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPMKRTG*VSRSRK Trigger: CTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCAT...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGGAGGGAAAGAACATaGCTGCCCCGCTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREGRERT*LPRCRL Trigger: CAACCTGCAGCGGGGCAGTCATGTTCTTTCCCTCCC...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCCTTTGGTTGCCGCAGTaGGAGGGTTTTCCAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPLWLPQ*EGFPGT Trigger: CGTTCCTGGAAAACCCTCTCACTGCGGCAACCAAAG...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCCCGGCTTCCTCTATCTaGAGCTGGAAGGTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPPASSI*SWKVSS Trigger: TGAGGACACCTTCCAGCTGCAGATAGAGGAAGCCGG...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | TATCGCTGGCTCATGACAACGGCTGAGTCTCTGCATGGGCACAGCTGGCTGACACTGTTTCTTTTGCTGTaGTCTGGCTCTGGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRWLMTTAESLHGHSWLTLFLLL*SGSGCS Trigger: AGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAG...TGTCAGCCAGCTGTGCCCATGCAGAGACTCAGCCGTTGTCATGAGCCAGCGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGGTGGTACACGGCTGGTaGGATTCCCACAGCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVTTFARADGSATRDGFLVVHGW*DSHSKA Trigger: GGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCAC...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCATCTTTTGCTGTGCTCTaGCTCTGGGTGCTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPSFAVL*LWVLSL Trigger: GAGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGA...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTCCGGCATCCGAAGGCTaGGTTCCGAGGGGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGPASEG*VPRGRK Trigger: TTTTCTTCCCCTCGGAACTCAGCCTTCGGATGCCGG...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTGTTTGGCCGTGTGCTaGCGGGAGTGCCAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRCLAVC*RECQYF Trigger: GAAGTACTGGCACTCCCGTCAGCACACGGCCAAACA...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGGCCTCTCTTATCAATaGCCAGCTGGTTGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPGLSYQ*PAGCYG Trigger: CCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCC...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAAGAGTGGTACACGGCTaGTGGGATTCCCACAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPRVVHG*WDSHSK Trigger: TTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCT...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACATAGGAGCGCCGCTGTaGGTAGAGGGCTTCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHIGAPL*VEGFIL Trigger: CAGAATGAAGCCCTCTACCCACAGCGGCGCTCCTAT...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACTTTCTCCAGCAGAAATaGGGGGCTGCTCCGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHFLQQK*GAAPSH Trigger: ATGTGACGGAGCAGCCCCTCATTTCTGCTGGAGAAA...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCTTGCTATGGAGACAGTaGCTGTTGTATCGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPLLWRQ*LLYREL Trigger: CAGCTCCCGATACAACAGTCACTGTCTCCATAGCAA...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCATGTCTTCGTCTCCGTTaGTGCTCATCATCGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPCLRLR*CSSSLW Trigger: CCAAAGCGATGATGAGCATCAACGGAGACGAAGACA...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGCCCACAGCAAAGCCGTaGGGCTGGATTTCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRPTAKP*GWISVL Trigger: CAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGG...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTCGCCAGCCAGTAGCCCACCACTCTTATGGACACAGGCAGACTTTGACGGTGAATCCCTTCATTaGTGCTTCCTTCCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSPASSPPLLWTQADFDGESLH*CFLPLR Trigger: CCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACC...GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTATTATCAATGCCCAGCTaGTTGCTATGGGGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVLSMPS*LLWGRT Trigger: CGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAA...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTATCGGGAGCTGTCAGATaGCCTCTCTTATCAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVSGAVR*PLLSMP Trigger: GGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGA...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGAGAAGGTGGAGTCTaGAGTCCTCCGCTGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREGEGGV*SPPLSI Trigger: AATGCTCAGCGGAGGACTCCAGACTCCACCTTCTCC...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTAATGCACGTCCGGAATaGAGAGGACAGGCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGNARPE*RGQAEC Trigger: ACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATT...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTAAATCTCTGTCAGGGTaGGCTTGTACGAGCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIKSLSG*ACTSRR Trigger: CCGGCGGCTCGTACAAGCTCACCCTGACAGAGATTT...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACGTGGGTAGGCATGGTTaGTATGGAGACAGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHVGRHG*YGDSDC Trigger: ACAGTCACTGTCTCCATAGCAACCATGCCTACCCAC...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAATAGTGCTGTCCCCTTaGTTCTGCCGCAGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREIVLSP*FCRSDL Trigger: CAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTAT...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGCAAAGCCGTGCGGCTaGATTTCTGTCTTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREAKPCG*ISVLME Trigger: CTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGC...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGGCAAAGCCGTGCGGCTaGATTTCTGTCTTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRAKPCG*ISVLME Trigger: CTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGC...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACAGAGCAGCACTCTCTTaGGTTCTTCTGTCCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHRAALS*VLLSES Trigger: TGACTCGGACAGAAGAACCCAAGAGAGTGCTGCTCT...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTCGCCAGCCAGTAGCCCACCACTCTTATGGACACAGGCAGACTTTGACTTCCCAATCTTGTCATaGGGGACATCATACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSPASSPPLLWTQADFDFPILS*GTSYLS Trigger: AGACAAGTATGATGTCCCCCATGACAAGATTGGGAA...GTCAAAGTCTGCCTGTGTCCATAAGAGTGGTGGGCTACTGGCTGGCGAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACTCCTCTATCTGCAGCTaGAAGGTGTCCTCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHSSICS*KVSSLE Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATAGAGGA...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGTCGAAGACTTCTTCTaGTTCCTTTCGGACATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPVEDFF*FLSDIE Trigger: CTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGAC...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCATCTTCGGTTCCGAATaGCCCTCTTTTCAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAVHMSKEVAREGSSNAPIFGSE*PSFQDR Trigger: TCTGTCTTGAAAAGAGGGCCATTCGGAACCGAAGAT...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGAGAGCAGCACTCTCTTaGGTTCTTCTGTCCGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRRAALS*VLLSES Trigger: TGACTCGGACAGAAGAACCCAAGAGAGTGCTGCTCT...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTTCCTCTATCTGCAGCTaGAAGGTGTCCTCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGSSICS*KVSSLE Trigger: CTCCAATGAGGACACCTTCCAGCTGCAGATAGAGGA...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATGCTGTGCTCTGGCTCTaGGTGCTCTCCCTCGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCLFLGKQRSTCLVHIINAVLWL*VLSLGL Trigger: AAGCCCGAGGGAGAGCACCCAGAGCCAGAGCACAGC...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCAGCAAAAACCACCATaGTCACACTTCGAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVTTFARADGSATRDGFLQQKPP*SHFELC Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACAGCAGTTCACAGAGATaGAGACCTTTGCCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEQMALPHEMAFCYAREHSSSQR*RPLPHH Trigger: ATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCT...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAACTGTATGTGTCGATTTaGATGTTGAGTGGCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVARELYVSI*MLSGKP Trigger: GGGCTTGCCACTCAACATTCAAATCGACACATACAG...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AGGCGAGAACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAAGAGATGAAGACCTTTaGCTCATCATTGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RREHKSLKDKLLPSPLSPRDEDL*LIIDVP Trigger: TGGGACATCAATGATGAGGCAAAGGTCTTCATCTCT...TGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTTCTCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTGTATGCTGTTTCTTTTaGTGTGCTCTGGCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGVCCFF*CALALG Trigger: ACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATAC...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | TGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACGGTGGTACACGGCTGGTaGGATTCCCACAGCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTYIQRSFNRANFTLSLTVVHGW*DSHSKA Trigger: GGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCAC...CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTTCGGTGGGCTCAGAGTaGTACACGGCTGGTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPQLCKFMNAFQFKHTVASVGSE*YTAGGI Trigger: AATCCCACCAGCCGTGTACCACTCTGAGCCCACCGA...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATGACCGGCGCTCTCTaGGGACCTTGTAGTAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIMTGAL*GPCSSH Trigger: ATGACTACTACAAGGTCCCCAGAGAGCGCCGGTCAT...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACCTGAACGCCCTCCTTaGAGGTCTCGGAGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKPERPP*RSRRRW Trigger: CCACCTTCTCCGAGACCTTCAAGGAGGGCGTTCAGG...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTAAAGACATAGTCCTCTaGATTCATGCCCGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIKDIVL*IHARHP Trigger: CGGATGCCGGGCATGAATTCAGAGGACTATGTCTTT...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTGTCGAAGACTTCTTCTaGTTCCTTTCGGACATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGVEDFF*FLSDIE Trigger: CTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGAC...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTGAATCCCTTCATTaGTGCTTCCTTCCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREGESLH*CFLPLR Trigger: CCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACC...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTACCGTCACATTTGGTATaGTGTTTCTTTTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVPSHLV*CFFCCA Trigger: AGCACAGCAAAAGAAACAGCATACCAAATGTGACGG...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAATTCCAGTGTCTCAGCTaGTCTTCTCTGCTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKFFIRKAVHMSKEVAREFQCLS*SSLLLS Trigger: AGACAAAAGCAGAGAAGACCAGCTGAGACACTGGAA...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTGGAAGGTGTCCTCATTaGAGTAGTGCTTCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPHIVAAVQSSISSTQGGRCPH*SSASQC Trigger: ACATTGTGAAGCACTACTCCAATGAGGACACCTTCC...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGGGAAGGTGTCCTCATTaGAGTAGTGCTTCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRGRCPH*SSASQC Trigger: ACATTGTGAAGCACTACTCCAATGAGGACACCTTCC...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTTGTCGATTTGAATGTTaGGTGGCAAGCCCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHICRFEC*VASPSH Trigger: GTGTGAAGGGCTTGCCACTCAACATTCAAATCGACA...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATCAATGCCCAGCTGGTTaGTATGGGGGAGGACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLFLGKQRSTCLVHIINQCPAG*YGGGRC Trigger: ACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTG...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTGGCCTCTCTTATCAATaGCCAGCTGGTTGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQLCKFMNAFQFKHTVAGLSYQ*PAGCYG Trigger: CCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCC...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | TGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACGATAGTGCTGTCCCCTTaGTTCTGCCGCAGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTYIQRSFNRANFTLSLTIVLSP*FCRSDL Trigger: CAAGTCACTGCGGCAGAAGCAAGGGGACAGCACTAT...CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTATCAGCTGGTCTTCTCTaGTTTTGTCTTCAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTKASKTSYCLPLSRQPVSAGLL*FCLQQK Trigger: TTTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTGA...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTTGCAGGTTGGTAAAATaGACGTCCGGAATGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHICRLVK*TSGMKR Trigger: CCTCTTCATTCCGGACGTGCATTTTACCAACCTGCA...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCGGGAAGAAAACCTCCTaGACGCCCTCCTTGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YCTYIQRSFNRANFTLSLGKKTS*TPSLKV Trigger: GACCTTCAAGGAGGGCGTTCAGGAGGTTTTCTTCCC...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTATGTTTGGCCGTGTGCTaGCGGGAGTGCCAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLCLAVC*RECQYF Trigger: GAAGTACTGGCACTCCCGTCAGCACACGGCCAAACA...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTAGCAGTTCACAGAGATaGAGACCTTTGCCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHISSSQR*RPLPHH Trigger: ATGATGAGGCAAAGGTCTTCATCTCTGTGAACTGCT...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTAAAATCTCTGTCAGGGTaGGCTTGTACGAGCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLKSLSG*ACTSRR Trigger: CCGGCGGCTCGTACAAGCTCACCCTGACAGAGATTT...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACCCAGCTGGTTGCTATaGGGGAGGACGATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKPSWLL*GRTMLK Trigger: CTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGG...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCAAGGCTTCATCCTCACTaGTATAGGAGCGCCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IALIYNAALTELTSHCHSRLHPH*YRSAAV Trigger: CACAGCGGCGCTCCTATACCAGTGAGGATGAAGCCT...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATAAAGACATAGTCCTCTaGATTCATGCCCGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCLFLGKQRSTCLVHIINKDIVL*IHARHP Trigger: CGGATGCCGGGCATGAATTCAGAGGACTATGTCTTT...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTAGAGATGAAGACCTTTaGCTCATCATTGATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIRDEDL*LIIDVP Trigger: TGGGACATCAATGATGAGGCAAAGGTCTTCATCTCT...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | TGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACGTGCAGGTTGGTAAAATaGACGTCCGGAATGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTYIQRSFNRANFTLSLTCRLVK*TSGMKR Trigger: CCTCTTCATTCCGGACGTGCATTTTACCAACCTGCA...CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAAAGAGTGGTACACGGCTaGTGGGATTCCCACAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKRVVHG*WDSHSK Trigger: TTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCT...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTAGGAGAAGGTGGAGTCTaGAGTCCTCCGCTGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLGEGGV*SPPLSI Trigger: AATGCTCAGCGGAGGACTCCAGACTCCACCTTCTCC...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAATCTGCCGCAGTGACTTaGAGGCTTCCAGGGTATACT | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKSAAVT*RLPGYT Trigger: AGTATACCCTGGAAGCCTCCAAGTCACTGCGGCAGA...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCTTGCTATGGAGACAGTaGCTGTTGTATCGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCTYIQRSFNRANFTLSLLLWRQ*LLYREL Trigger: CAGCTCCCGATACAACAGTCACTGTCTCCATAGCAA...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTTTCCTTCCTTTAAGGTaGCAGGATAGAACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPQLCKFMNAFQFKHTVAFLPLR*QDRTGL Trigger: AAGGCCAGTTCTATCCTGTCACCTTAAAGGAAGGAA...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACAATGAAGAGGACAGGCTaGGTGTCGAGGTCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTMKRTG*VSRSRK Trigger: CTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCAT...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTATTATCAATGCCCAGCTaGTTGCTATGGGGGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLLSMPS*LLWGRT Trigger: CGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAA...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | TGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACGTTCCAGTGTCTCAGCTaGTCTTCTCTGCTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTYIQRSFNRANFTLSLTFQCLS*SSLLLS Trigger: AGACAAAAGCAGAGAAGACCAGCTGAGACACTGGAA...CGTGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAATGTCGATTTGAATGTTaGGTGGCAAGCCCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKCRFEC*VASPSH Trigger: GTGTGAAGGGCTTGCCACTCAACATTCAAATCGACA...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCGACATCATACTTGTCTaGAATTGCCTCCATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YCTYIQRSFNRANFTLSLDIILV*NCLHQA Trigger: GGCCTGATGGAGGCAATTTCAGACAAGTATGATGTC...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTATCAATATCTTCGGTTCCGAATaGCCCTCTTTTCAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCLFLGKQRSTCLVHIINIFGSE*PSFQDR Trigger: TCTGTCTTGAAAAGAGGGCCATTCGGAACCGAAGAT...ATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CCA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTTTCCCAATCTTGTCATaGGGGACATCATACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPQLCKFMNAFQFKHTVAFPILS*GTSYLS Trigger: AGACAAGTATGATGTCCCCCATGACAAGATTGGGAA...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCTTCCTTCCTTTAAGGTaGCAGGATAGAACTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCTYIQRSFNRANFTLSLFLPLR*QDRTGL Trigger: AAGGCCAGTTCTATCCTGTCACCTTAAAGGAAGGAA...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCTGAACCTAAAGAAACCCGCAATTGTATTTCTGTTACAGGATTCATTAGACATCATACTTGTCTaGAATTGCCTCCATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLNLKKPAIVFLLQDSLDIILV*NCLHQA Trigger: GGCCTGATGGAGGCAATTTCAGACAAGTATGATGTC...TAATGAATCCTGTAACAGAAATACAATTGCGGGTTTCTTTAGGTTCAGGGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACACATCATCGCTTTGGTTaGCGCAGTGAGAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTHHRFG*RSERVF Trigger: GAAAACCCTCTCACTGCGGCAACCAAAGCGATGATG...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACACTGTATGTGTCGATTTaGATGTTGAGTGGCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTLYVSI*MLSGKP Trigger: GGGCTTGCCACTCAACATTCAAATCGACACATACAG...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACACAGCAAAAACCACCATaGTCACACTTCGAACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTQQKPP*SHFELC Trigger: GCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTG...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR GCA 90 bp | CAAAACATTCCCCTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAATCAGCTGGTCTTCTCTaGTTTTGTCTTCAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNIPLPQLCKFMNAFQFKSAGLL*FCLQQK Trigger: TTTTTGCTGAAGACAAAAGCAGAGAAGACCAGCTGA...TTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAGGGGAATGTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| 3UTR CAA 72 bp | ACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTaGGTCCACATTATCAATAATAACTTAACCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCLFLGKQRSTC*VHIINNNLTSS Trigger: AGAAGAGGTTAAGTTATTATTGATAATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | CTGAGGCTCCGGTCAAAAACCACCACACGTTCGGTGGGCTCAGAGTaGTACACGGCTGGTGGGATTCCCACAGCAAAGCCGTGCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLRSKTTTRSVGSE*YTAGGIPTAKPCGW Trigger: CCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCGGAGCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | GAGTGGTACACGGCTGGTGGGATTCCCACAGCAAAGCCGTGCGGCTaGATTTCTGTCTTGATGGAGTGGGTAGGCATGGTTGCTATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EWYTAGGIPTAKPCG*ISVLMEWVGMVAME Trigger: CTCCATAGCAACCATGCCTACCCACTCCATCAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | GTCAAAAACCACCACACGTTCGGTGGGCTCAGAGTGGTACACGGCTaGTGGGATTCCCACAGCAAAGCCGTGCGGCTGGATTTCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKNHHTFGGLRVVHG*WDSHSKAVRLDFCL Trigger: AAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS GCA 90 bp | ATGAGGGGCTGCTCCGTCACATTTGGTATGCTGTTTCTTTTGCTGTaGTCTGGCTCTGGGTGCTCTCCCTCGGGCTTTACGGCTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: MRGCSVTFGMLFLLL*SGSGCSPSGFTADD Trigger: GTCATCAGCCGTAAAGCCCGAGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATACCAAATGTGACGGAGCAGCCCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | AAAAACCACCACACGTTCGGTGGGCTCAGAGTGGTACACGGCTGGTaGGATTCCCACAGCAAAGCCGTGCGGCTGGATTTCTGTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KNHHTFGGLRVVHGW*DSHSKAVRLDFCLD Trigger: ATCAAGACAGAAATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAATCTGTCAGGGTGAGCTaGTACGAGCCGCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKFFIRKAVHMSKEVARESVRVS*YEPPAS Trigger: GGAAGCCGGCGGCTCGTACAAGCTCACCCTGACAGA...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 90 bp | CGCTGCAGGTTGGTAAAATGCACGTCCGGAATGAAGAGGACAGGCTaGGTGTCGAGGTCCAGGAAGGGCTTGAACACTGTGATGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCRLVKCTSGMKRTG*VSRSRKGLNTVMSV Trigger: GACAGACATCACAGTGTTCAAGCCCTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATTTTACCAACCTGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | GGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTGGTTGCTATaGGGGAGGACGATGTTGAAGGGCACGTTTTTCAGCACTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GAVRWPLLSMPSWLL*GRTMLKGTFFSTCT Trigger: GGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGTCAATGCCCAGCTGGTaGCTATGGGGGAGGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: TVTTFARADGSATRDGFLSMPSW*LWGRTM Trigger: CATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGA...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCTTCAAAGACGGCGTCTaGAGCATCAGGGCGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAVHMSKEVAREGSSNAPFKDGV*SIRASK Trigger: CTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAA...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | GTTGTATCGGGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTaGTTGCTATGGGGGAGGACGATGTTGAAGGGCACGTTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVSGAVRWPLLSMPS*LLWGRTMLKGTFFS Trigger: GCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 90 bp | ATGGTTGCTATGGAGACAGTGACTGTTGTATCGGGAGCTGTCAGATaGCCTCTCTTATCAATGCCCAGCTGGTTGCTATGGGGGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: MVAMETVTVVSGAVR*PLLSMPSWLLWGRT Trigger: CGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTCACTGTCTCCATAGCAACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCGGCTGGATTTCTGTCTaGATGGAGTGGGTAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: KAVHMSKEVAREGSSNAPGWISV*MEWVGM Trigger: CATGCCTACCCACTCCATCAAGACAGAAATCCAGCC...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTCTGCCCCGCTGCAGGTaGGTAAAATGCACGTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GNTCLFLGKQRSTCLVHILPRCR*VKCTSG Trigger: TCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAG...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CGCAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAATTCAAAGACGGCGTCTaGAGCATCAGGGCGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKFFIRKAVHMSKEVAREFKDGV*SIRASK Trigger: CTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAA...TTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | ACGGTGACAACATTCGCAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGGCTGCTCCGTCACATTaGGTATGCTGTTTAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVTTFARADGSATRDGFLAAPSH*VCCLGH Trigger: GTGACCTAAACAGCATACCAAATGTGACGGAGCAGC...CAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTGCGAATGTTGTCACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020985.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGAGGTCCAGGAAGGGCTaGAACACTGTGATGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRRSRKG*NTVMSV Trigger: GACAGACATCACAGTGTTCAAGCCCTTCCTGGACCT...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 90 bp | CTTCAAAGACGGCGTCTTGAGCATCAGGGCGTCGAAGACTTCTTCTaGTTCCTTTCGGACATAGAGCAGCACTCTCTTGGGTTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQRRRLEHQGVEDFF*FLSDIEQHSLGFFC Trigger: ACAGAAGAACCCAAGAGAGTGCTGCTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 90 bp | ACTTGTCTGAAATTGCCTCCATCAGGCCCTTCAAAGACGGCGTCTTaGGCATCAGGGCGTCGAAGACTTCTTCTGATTCCTTTCGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TCLKLPPSGPSKTAS*ASGRRRLLLIPFGH Trigger: ATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCTTCATCAGAAAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCTTTCAGCTCCCTaGTCGCAGAAGACCTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: QVLHQKGSPHVQGSCTGRFLSAP*SQKTFI Trigger: GATAAAGGTCTTCTGCGACAAGGGAGCTGAAAGGAA...CCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTTTCTGATGAAGAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCTCTGTCAGGGTGAGCTaGTACGAGCCGCCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YCTYIQRSFNRANFTLSLSVRVS*YEPPAS Trigger: GGAAGCCGGCGGCTCGTACAAGCTCACCCTGACAGA...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS GCA 90 bp | GGCTTGAACACTGTGATGTCTGTCCGTTTGTGCGAGGGAAGCAGCTaGACTTTAACGTCAGACACTTTTCTCTTGCTCTGTTTTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLNTVMSVRLCEGSS*TLTSDTFLLLCFRS Trigger: AGAACGAAAACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTGCAGCTGCTTCCCTCGCACAAACGGACAGACATCACAGTGTTCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGTCCACATGTCCAAGGAAGTTGCACGGGAAGGTTCCAGTAATGCACCCAGGGTATACTCAAAGTaGTTCCCAGAAACATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAVHMSKEVAREGSSNAPRVYSK*FPETLS Trigger: TGACAATGTTTCTGGGAACAACTTTGAGTATACCCT...GGGTGCATTACTGGAACCTTCCCGTGCAACTTCCTTGGACATGTGGACTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTAGCTATCTCCTCAATGTaGCTGATAGTGTTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTKASKTSYCLPLSRQPVAISSM*LIVLKL Trigger: AAGCTTCAACACTATCAGCAACATTGAGGAGATAGC...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CTGCCACAGTTATGTAAATTCATGAATGCCTTCCAGTTCAAACACACGGTAGCTATGCTCATCATCGCTTaGGTTGCCGCAGTGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPQLCKFMNAFQFKHTVAMLIIA*VAAVRG Trigger: CCCTCTCACTGCGGCAACCAAAGCGATGATGAGCAT...AGCTACCGTGTGTTTGAACTGGAAGGCATTCATGAATTTACATAACTGTGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS TCA 90 bp | ATACTCAAAGTTGTTCCCAGAAACATTGTCAAAGACATAGTCCTCTaGATTCATGCCCGGCATCCGAAGGCTGAGTTCCGAGGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILKVVPRNIVKDIVL*IHARHPKAEFRGEE Trigger: TTCTTCCCCTCGGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGTCTTTGACAATGTTTCTGGGAACAACTTTGAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AACACAAAAGCCTCAAAGACAAGCTACTGCCTTCCCCTCTCTCGCCAGCCAGTAAGGGTATACTCAAAGTaGTTCCCAGAAACATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTKASKTSYCLPLSRQPVRVYSK*FPETLS Trigger: TGACAATGTTTCTGGGAACAACTTTGAGTATACCCT...TACTGGCTGGCGAGAGAGGGGAAGGCAGTAGCTTGTCTTTGAGGCTTTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CAAGAGCAGATGGCTCTGCCACACGAGATGGCTTTTTGCTATGCTAGGGAACACAATATTTTCCCAATCTaGTCATGGGGGACATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: QEQMALPHEMAFCYAREHNIFPI*SWGTSY Trigger: GTATGATGTCCCCCATGACAAGATTGGGAAAATATT...GTGTTCCCTAGCATAGCAAAAAGCCATCTCGTGTGGCAGAGCCATCTGCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACACTGCCCCGCTGCAGGTaGGTAAAATGCACGTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTLPRCR*VKCTSG Trigger: TCCGGACGTGCATTTTACCAACCTGCAGCGGGGCAG...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | CACACACCTCATATAGTAGCTGCAGTCCAGTCTTCCATTAGCTCCACTCAGGGTAATATTTTCCCAATCTaGTCATGGGGGACATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: HTPHIVAAVQSSISSTQGNIFPI*SWGTSY Trigger: GTATGATGTCCCCCATGACAAGATTGGGAAAATATT...ACCCTGAGTGGAGCTAATGGAAGACTGGACTGCAGCTACTATATGAGGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACATCAATGCCCAGCTGGTaGCTATGGGGGAGGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTSMPSW*LWGRTM Trigger: CATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGA...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | GGGAACACTTGCTTGTTTTTGGGAAAACAGCGTTCTACCTGCTTGGTCCACATTGCTATCTCCTCAATGTaGCTGATAGTGTTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNTCLFLGKQRSTCLVHIAISSM*LIVLKL Trigger: AAGCTTCAACACTATCAGCAACATTGAGGAGATAGC...AATGTGGACCAAGCAGGTAGAACGCTGTTTTCCCAAAAACAAGCAAGTGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | TATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCAGGTCCAGGAAGGGCTaGAACACTGTGATGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YCTYIQRSFNRANFTLSLRSRKG*NTVMSV Trigger: GACAGACATCACAGTGTTCAAGCCCTTCCTGGACCT...GAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCACTGTCTTCGTCTCCGTaGATGCTCATCATCGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IALIYNAALTELTSHCHSLSSSP*MLIIAL Trigger: CAAAGCGATGATGAGCATCAACGGAGACGAAGACAG...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | ATTGCACTTATATACAACGCAGCTTTAACAGAGCTAACTTCACACTGTCACTCATTCCTTTCAGCTCCCTaGTCGCAGAAGACCTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: IALIYNAALTELTSHCHSFLSAP*SQKTFI Trigger: GATAAAGGTCTTCTGCGACAAGGGAGCTGAAAGGAA...TGAGTGACAGTGTGAAGTTAGCTCTGTTAAAGCTGCGTTGTATATAAGTGCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACACACGTTTTTCAGCACTaGCACCCTGTTTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTHVFQH*HPVFSS Trigger: GCTGGAGAAAACAGGGTGCAAGTGCTGAAAAACGTG...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTCATGCTTCGCTTTCTAAGCACATCAGAAATTCAAACAACAACAACAGCTGCTCCGTCACATTaGGTATGCTGTTTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVLMLRFLSTSEIQTTTTAAPSH*VCCFFC Trigger: GCAAAAGAAACAGCATACCAAATGTGACGGAGCAGC...TGTTGTTGTTGTTTGAATTTCTGATGTGCTTAGAAAGCGAAGCATGAGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS CCA 72 bp | CACCACACGTTCGGTGGGCTCAGAGTGGTACACGGCTaGTGGGATTCCCACAGCAAAGCCGTGCGGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HHTFGGLRVVHG*WDSHSKAVRLD Trigger: ATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 72 bp | CACACGTTCGGTGGGCTCAGAGTGGTACACGGCTGGTaGGATTCCCACAGCAAAGCCGTGCGGCTGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTFGGLRVVHGW*DSHSKAVRLDF Trigger: GAAATCCAGCCGCACGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 72 bp | CGGTCAAAAACCACCACACGTTCGGTGGGCTCAGAGTaGTACACGGCTGGTGGGATTCCCACAGCAAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSKTTTRSVGSE*YTAGGIPTAKP Trigger: CGGCTTTGCTGTGGGAATCCCACCAGCCGTGTACCACTCTGAGCCCACCGAACGTGTGGTGGTTTTTGACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS CCA 72 bp | GGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTaGTTGCTATGGGGGAGGACGATGTTGAAGGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GAVRWPLLSMPS*LLWGRTMLKGT Trigger: CGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 72 bp | CATAGTCCTCTGAATTCATGCCCGGCATCCGAAGGCTaGGTTCCGAGGGGAAGAAAACCTCCTGAACGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HSPLNSCPASEG*VPRGRKPPERP Trigger: AGGGCGTTCAGGAGGTTTTCTTCCCCTCGGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 72 bp | CGGCGTCTTGAGCATCAGGGCGTCGAAGACTTCTTCTaGTTCCTTTCGGACATAGAGCAGCACTCTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLEHQGVEDFF*FLSDIEQHSLG Trigger: CCCAAGAGAGTGCTGCTCTATGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS GCA 72 bp | TGCTCCGTCACATTTGGTATGCTGTTTCTTTTGCTGTaGTCTGGCTCTGGGTGCTCTCCCTCGGGCTTTACG | + |
|
Preference number: 6 (lower is better) Translates to: CSVTFGMLFLLL*SGSGCSPSGFT Trigger: CGTAAAGCCCGAGGGAGAGCACCCAGAGCCAGAGCACAGCAAAAGAAACAGCATACCAAATGTGACGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085553.13 |
||
| CDS CAA 90 bp | GTATCGGGAGCTGTCAGATGGCCTCTCTTATCAATGCCCAGCTGGTaGCTATGGGGGAGGACGATGTTGAAGGGCACGTTTTTCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VSGAVRWPLLSMPSW*LWGRTMLKGTFFST Trigger: AGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
||
| CDS TCA 72 bp | CAATGCCCAGCTGGTTGCTATGGGGGAGGACGATGTTaGAGGGCACGTTTTTCAGCACTTGCACCCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QCPAGCYGGGRC*RARFSALAPCF Trigger: AAAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS TCA 72 bp | TTGGTAAAATGCACGTCCGGAATGAAGAGGACAGGCTaGGTGTCGAGGTCCAGGAAGGGCTTGAACACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LVKCTSGMKRTG*VSRSRKGLNTV Trigger: CACAGTGTTCAAGCCCTTCCTGGACCTCGACACTCAGCCTGTCCTCTTCATTCCGGACGTGCATTTTACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS CAA 72 bp | TCAATGCCCAGCTGGTTGCTATGGGGGAGGACGATGTaGAAGGGCACGTTTTTCAGCACTTGCACCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SMPSWLLWGRTM*KGTFFSTCTLF Trigger: AAACAGGGTGCAAGTGCTGAAAAACGTGCCCTTCAACATCGTCCTCCCCCATAGCAACCAGCTGGGCATTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS CAA 72 bp | GAAATTGCCTCCATCAGGCCCTTCAAAGACGGCGTCTaGAGCATCAGGGCGTCGAAGACTTCTTCTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: EIASIRPFKDGV*SIRASKTSSDS Trigger: GGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS TCA 72 bp | AAATTGCCTCCATCAGGCCCTTCAAAGACGGCGTCTTaGGCATCAGGGCGTCGAAGACTTCTTCTGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: KLPPSGPSKTAS*ASGRRRLLLIP Trigger: AGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS CCA 72 bp | ATGGAGACAGTGACTGTTGTATCGGGAGCTGTCAGATaGCCTCTCTTATCAATGCCCAGCTGGTTGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: METVTVVSGAVR*PLLSMPSWLLW Trigger: CCATAGCAACCAGCTGGGCATTGATAAGAGAGGCCATCTGACAGCTCCCGATACAACAGTCACTGTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS CAA 90 bp | TACTTGTCTGAAATTGCCTCCATCAGGCCCTTCAAAGACGGCGTCTaGAGCATCAGGGCGTCGAAGACTTCTTCTGATTCCTTTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: YLSEIASIRPFKDGV*SIRASKTSSDSFRT Trigger: TGTCCGAAAGGAATCAGAAGAAGTCTTCGACGCCCTGATGCTCAAGACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS TCA 72 bp | GTTGTTCCCAGAAACATTGTCAAAGACATAGTCCTCTaGATTCATGCCCGGCATCCGAAGGCTGAGTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: VVPRNIVKDIVL*IHARHPKAEFR Trigger: TCGGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGTCTTTGACAATGTTTCTGGGAACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS TCA 72 bp | TTTCCCAATCTTGTCATGGGGGACATCATACTTGTCTaGAATTGCCTCCATCAGGCCCTTCAAAGACGGCGT | + |
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Preference number: 6 (lower is better) Translates to: FPNLVMGDIILV*NCLHQALQRRR Trigger: ACGCCGTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS GCA 72 bp | ACTGTGATGTCTGTCCGTTTGTGCGAGGGAAGCAGCTaGACTTTAACGTCAGACACTTTTCTCTTGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TVMSVRLCEGSS*TLTSDTFLLLC Trigger: ACAGAGCAAGAGAAAAGTGTCTGACGTTAAAGTGCAGCTGCTTCCCTCGCACAAACGGACAGACATCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS TCA 72 bp | ACCATGATCACACTTCGAACTTTGCTGATAGGGTGGTaGATCCCTTCATTGCTGCTTCCTTCCTTTAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TMITLRTLLIGW*IPSLLLPSFKV Trigger: CACCTTAAAGGAAGGAAGCAGCAATGAAGGGATTCACCACCCTATCAGCAAAGTTCGAAGTGTGATCATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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| CDS CAA 72 bp | AATATTTTCCCAATCTTGTCATGGGGGACATCATACTaGTCTGAAATTGCCTCCATCAGGCCCTTCAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: NIFPILSWGTSY*SEIASIRPFKD Trigger: GTCTTTGAAGGGCCTGATGGAGGCAATTTCAGACAAGTATGATGTCCCCCATGACAAGATTGGGAAAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020985.9 ENSMUST00000085553.13 |
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