Pregenerated sensors for GREM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050069Ensembl transcript IDs: ENSMUST00000055294.4
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCCAAGGCATACCCTCCCCAGCTCATCCCAACCCTCCTCCAGGTaGCAGACTGGAGAGCCAGCATCACTGCTGGGCATCCACAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SPRHTLPSSSQPSSR*QTGEPASLLGIHKP Trigger: AGGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGGGTTGGGATGAGCTGGGGAGGGTATGCCTTGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | GTGACAGGGACACTGTTGGCCCTAAGAGACACATTTGCTGCTGACTaGGACACCGGGCAGAGTGTGAGTGAGCTCAACAGAAGTGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: VTGTLLALRDTFAAD*DTGQSVSELNRSGG Trigger: ACCGCCACTTCTGTTGAGCTCACTCACACTCTGCCCGGTGTCCCAGTCAGCAGCAAATGTGTCTCTTAGGGCCAACAGTGTCCCTGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR GCA 90 bp | TTTGTTCTGGAACCCCTTGCGGGTGAGCATCTCCTTTATAGATGCTaGCCACATCAGCATCACAGCAGCGGCAGAGCTGGGCAACTCCCA | + |
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Preference number: 1 (lower is better) Translates to: FVLEPLAGEHLLYRC*PHQHHSSGRAGQLP Trigger: TGGGAGTTGCCCAGCTCTGCCGCTGCTGTGATGCTGATGTGGGCAGCATCTATAAAGGAGATGCTCACCCGCAAGGGGTTCCAGAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | CGTGCATCCTTCACCAGAGGAAGGCTCAAGCTGGAGTGTAGGATGTaGCCAGGGAAAGACTGGCTTTTCCACATGGTGGAGTCGTCAATC | + |
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Preference number: 1 (lower is better) Translates to: RASFTRGRLKLECRM*PGKDWLFHMVESSI Trigger: GATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCTTGAGCCTTCCTCTGGTGAAGGATGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | TGCGACAGAAGAGTCGTGCATCCTTCACCAGAGGAAGGCTCAAGCTaGAGTGTAGGATGTGGCCAGGGAAAGACTGGCTTTTCCACATGG | + |
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Preference number: 1 (lower is better) Translates to: CDRRVVHPSPEEGSS*SVGCGQGKTGFSTW Trigger: CCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCTTGAGCCTTCCTCTGGTGAAGGATGCACGACTCTTCTGTCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | AGAGGAAGGCTCAAGCTGGAGTGTAGGATGTGGCCAGGGAAAGACTaGCTTTTCCACATGGTGGAGTCGTCAATCCCAGATGACAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: RGRLKLECRMWPGKD*LFHMVESSIPDDSA Trigger: TGCACTGTCATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCTTGAGCCTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | AGCTGGAGTGTAGGATGTGGCCAGGGAAAGACTGGCTTTTCCACATaGTGGAGTCGTCAATCCCAGATGACAGTGCATCTCCTGAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: SWSVGCGQGKTGFST*WSRQSQMTVHLLKN Trigger: ATTTTTCAGGAGATGCACTGTCATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | TGGAGTGTAGGATGTGGCCAGGGAAAGACTGGCTTTTCCACATGGTaGAGTCGTCAATCCCAGATGACAGTGCATCTCCTGAAAAATCTT | + |
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Preference number: 1 (lower is better) Translates to: WSVGCGQGKTGFSTW*SRQSQMTVHLLKNL Trigger: AAGATTTTTCAGGAGATGCACTGTCATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR GCA 90 bp | CACATTCGGATTCCCACCAAGGTTTCTCATTCACATTTGTCAGATTaGATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATTGCAC | + |
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Preference number: 1 (lower is better) Translates to: HIRIPTKVSHSHLSD*IRAILREASLEQLH Trigger: GTGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATCCGAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR TCA 90 bp | CTGAGTACATTCTGTATTCAGCTGGTGGGTGTTTCAATAAAGGCTTaGAGTTCCCATAGACTGGAGGTGAGAGCCATCCCACCAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: LSTFCIQLVGVSIKA*SSHRLEVRAIPPIL Trigger: AAGAATTGGTGGGATGGCTCTCACCTCCAGTCTATGGGAACTTCAAGCCTTTATTGAAACACCCACCAGCTGAATACAGAATGTACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR GCA 90 bp | GATTCCCACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTaGCATTCTCAGGGAGGCCTCCCTAGAACAATTGCACAAAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: DSHQGFSFTFVRLHT*HSQGGLPRTIAQRD Trigger: ATCTCTTTGTGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR GCA 90 bp | TCTCAGAGGCTGGATAAATGCACTCTGAGTACACAAGGACACAAGTaGAGAATTCAGCTTTTATGGCACATGATGCCAGGATCACATAGA | + |
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Preference number: 1 (lower is better) Translates to: SQRLDKCTLSTQGHK*RIQLLWHMMPGSHR Trigger: TCTATGTGATCCTGGCATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTGCATTTATCCAGCCTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR GCA 90 bp | GAACAAAACAATACAATCTCTGGCTTCTGTAAGACACAAGTGTGGTaGACTGGCTACAGGAGAGAAGAAGAGACTTACAGTGGACTTCTC | + |
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Preference number: 1 (lower is better) Translates to: EQNNTISGFCKTQVW*TGYRREEETYSGLL Trigger: GAGAAGTCCACTGTAAGTCTCTTCTTCTCTCCTGTAGCCAGTGCACCACACTTGTGTCTTACAGAAGCCAGAGATTGTATTGTTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | ACACCCACCATTAGGATCAAAAAGAATGCTCACATACATACATTGTaGGTCCCTAGCTTAACCTTTCCTGGTGATGTGTGGGTCCCATTA | + |
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Preference number: 1 (lower is better) Translates to: TPTIRIKKNAHIHTL*VPSLTFPGDVWVPL Trigger: TAATGGGACCCACACATCACCAGGAAAGGTTAAGCTAGGGACCCACAATGTATGTATGTGAGCATTCTTTTTGATCCTAATGGTGGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CCA 90 bp | TGCACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATaGCACATGATGCCAGGATCACATAGAATCCTAGAGTATCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: CTLSTQGHKCRIQLL*HMMPGSHRILEYLY Trigger: ATAAAGATACTCTAGGATTCTATGTGATCCTGGCATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR TCA 90 bp | ACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATGACTaGAATGTTTCTTGGTATTTTAGGAGTCTATTCTTTGTACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: TQQRLQQLISRTEDD*NVSWYFRSLFFVQE Trigger: TTCCTGTACAAAGAATAGACTCCTAAAATACCAAGAAACATTTCAGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR TCA 90 bp | GGTATTTTAGGAGTCTATTCTTTGTACAGGAAGCTATCCTCTGAGTaGCAGTTTACCTACATTACTACCCTCTATATTGGCTCTATATTT | + |
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Preference number: 1 (lower is better) Translates to: GILGVYSLYRKLSSE*QFTYITTLYIGSIF Trigger: AAATATAGAGCCAATATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCTTCCTGTACAAAGAATAGACTCCTAAAATACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGCTCATCCCAACCCTCCTCCAGGTGGCAGACTGGAGAGCCAGCATCACTGGGTGGGTTGGGGAGTaGATTGCTGACCTGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PQLIPTLLQVADWRASITGWVGE*IADLAV Trigger: AACTGCCAGGTCAGCAATTCACTCCCCAACCCACCC...AGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGGGTTGGGATGAGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCTCATCCCAACCCTCCTCCAGGTGGCAGACTGGAGAGCCAGCATCACTACTGGCTTTTCCACATaGTGGAGTCGTCAATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQLIPTLLQVADWRASITTGFST*WSRQSQ Trigger: CTGGGATTGACGACTCCACCATGTGGAAAAGCCAGT...AGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGGGTTGGGATGAGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATGGGCATCCACAAGCCTaGGTCTCAGAGCAGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: AGCETLLLTLRLHVTILHGHPQA*VSEQLM Trigger: CATAAGCTGCTCTGAGACTCAGGCTTGTGGATGCCC...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATTGGTGTCCAGAGGTGTaGAGAGTCTTGCCTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: AGCETLLLTLRLHVTILHWCPEV*RVLPAQ Trigger: CTGAGCAGGCAAGACTCTCCACACCTCTGGACACCA...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCTCATCCCAACCCTCCTCCAGGTGGCAGACTGGAGAGCCAGCATCACTTACTACCCTCTATATTaGCTCTATATTTCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PQLIPTLLQVADWRASITYYPLY*LYISAC Trigger: ACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTA...AGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGGGTTGGGATGAGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTTACAGCTTCCTAGTGACTCCTCTGTACACACCTCTGTCCCAATCCGGTTTTGTGGTCCTCATTTGTaGCAGGGACACTGTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SLQLPSDSSVHTSVPIRFCGPHL*QGHCWP Trigger: GGGCCAACAGTGTCCCTGTCACAAATGAGGACCACA...AAACCGGATTGGGACAGAGGTGTGTACAGAGGAGTCACTAGGAAGCTGTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATTGGAGGAAGGCTCAAGCTaGAGTGTAGGATGTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HLSDCIRAILREASLEQLEEGSS*SVGCGQ Trigger: CTGGCCACATCCTACACTCCAGCTTGAGCCTTCCTC...CAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATTCTCAGAGCAGCTTATaGATAGTCTCCCTCACATAC | + |
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Preference number: 2 (lower is better) Translates to: AGCETLLLTLRLHVTILHSQSSL*IVSLTY Trigger: GTATGTGAGGGAGACTATCCATAAGCTGCTCTGAGA...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATCATAGTCTCTACTCATaGTTGCTGTGTAGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: AGCETLLLTLRLHVTILHHSLYS*LLCSRS Trigger: ACTTCTGCTACACAGCAACCATGAGTAGAGACTATG...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATGGCACATGATCTTCGCAGCTGGGTGTaGGACTCTTCTCCTCACCCT | + |
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Preference number: 2 (lower is better) Translates to: HSEYTRTQVQNSAFMAHDLRSWV*DSSPHP Trigger: AGGGTGAGGAGAAGAGTCTCACACCCAGCTGCGAAG...ATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATGGCACATGATGAGAGCCAGCATCACTaGTGGGCATCCACAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HSEYTRTQVQNSAFMAHDESQHH*WASTSL Trigger: CAGGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTC...ATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATGGCACATGATCTCCAGGTGGCAGACTaGAGAGCCAGCATCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSEYTRTQVQNSAFMAHDLQVAD*RASITA Trigger: AGCAGTGATGCTGGCTCTCCAGTCTGCCACCTGGAG...ATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 90 bp | GCACATTCGGATTCCCACCAAGGTTTCTCATTCACATTTGTCAGATaGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATTGCA | + |
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Preference number: 2 (lower is better) Translates to: AHSDSHQGFSFTFVR*HTCHSQGGLPRTIA Trigger: TGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATCCGAATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 90 bp | GGATTTCAGCACATTCGGATTCCCACCAAGGTTTCTCATTCACATTaGTCAGATTGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFQHIRIPTKVSHSH*SDCIRAILREASLE Trigger: TTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATCCGAATGTGCTGAAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGTGGCCAGGGAAAGACTaGCTTTTCCACATGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TKVSHSHLSDCIRAILREWPGKD*LFHMVE Trigger: CTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCA...CTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATTGGAAATAAAGAGGTGGTaGTGTCCAGAGGTGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLSDCIRAILREASLEQLEIKRW*CPEVWR Trigger: TCTCCACACCTCTGGACACCACCACCTCTTTATTTC...CAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 90 bp | AGCTTCCTAGTGACTCCTCTGTACACACCTCTGTCCCAATCCGGTTaGTACACTATGCCACAATGCTTTAGTCTCTCCTGTGATGTCATA | + |
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Preference number: 2 (lower is better) Translates to: SFLVTPLYTPLSQSG*YTMPQCFSLSCDVI Trigger: TATGACATCACAGGAGAGACTAAAGCATTGTGGCATAGTGTACAAACCGGATTGGGACAGAGGTGTGTACAGAGGAGTCACTAGGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGTGAAAACAGTACCAGGTCTCCTCTCACACGTGCCTTTTAATCTTTACGGGAAGTCCATTTCCTaGTCCACTTGGTTTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: MAVKTVPGLLSHVPFNLYGKSIS*STWFGL Trigger: CAAGCCAAACCAAGTGGATCAGGAAATGGACTTCCC...GTAAAGATTAAAAGGCACGTGTGAGAGGAGACCTGGTACTGTTTTCACTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | ACTACAGCATATCATATAGCCTTCATGGGTACACCCACCATTAGGATCAAAAAGAGCCAGCATCACTGCTaGGCATCCACAAGCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TTAYHIAFMGTPTIRIKKSQHHC*ASTSLS Trigger: ACTCAGGCTTGTGGATGCCCAGCAGTGATGCTGGCT...CTTTTTGATCCTAATGGTGGGTGTACCCATGAAGGCTATATGATATGCTGTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAGACCACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATGACTTGGGGAGTGAATTGCTaGCCTGGCAGTTTTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KRPHNRDSNNSSAELKMTWGVNC*PGSFSS Trigger: AGAGGAAAAACTGCCAGGTCAGCAATTCACTCCCCA...AGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGTGGTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATGGCACATGATGTCCCATTAATAGAATaGCATGGGCTGGCTTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: HSEYTRTQVQNSAFMAHDVPLIE*HGLASQ Trigger: CTGCGAAGCCAGCCCATGTCATTCTATTAATGGGAC...ATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGCTCCTTTATAGATGCTaGCCACATCAGCATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: TKVSHSHLSDCIRAILRELLYRC*PHQHHS Trigger: GCTGTGATGCTGATGTGGGCAGCATCTATAAAGGAG...CTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATTGTCGAGTTTCTGGGAGTaGAGTTTTCCAACATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HLSDCIRAILREASLEQLSSFWE*SFPTSS Trigger: AGAAGATGTTGGAAAACTCCACTCCCAGAAACTCGA...CAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | AAAAGACCACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATGACTGGCTTTTCCACATGGTaGAGTCGTCAATCCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: KRPHNRDSNNSSAELKMTGFSTW*SRQSQM Trigger: CATCTGGGATTGACGACTCCACCATGTGGAAAAGCC...AGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGTGGTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCATCTCCTGAAAAATCTTGTCGAGTTTCTGGGAGTGGAGTTTTCCAACATTGGATCTGGGACAGTTaGCAAAGCTTCACTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SASPEKSCRVSGSGVFQHWIWDS*QSFTCG Trigger: ACCACAAGTGAAGCTTTGTCAACTGTCCCAGATCCA...ATGTTGGAAAACTCCACTCCCAGAAACTCGACAAGATTTTTCAGGAGATGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGTGAAAACAGTACCAGGTCTCCTCTCACACGTGCCTTTTAATCTTTACAATACAGAGACCTTGTaGGTGTTAACACAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MAVKTVPGLLSHVPFNLYNTETL*VLTQQQ Trigger: CTGCTGCTGTGTTAACACTCACAAGGTCTCTGTATT...GTAAAGATTAAAAGGCACGTGTGAGAGGAGACCTGGTACTGTTTTCACTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAAAGAATGCTCACATACATACATTGTGGGTCCCTAGCTTAACCTTTCCTCTAGGACACCCATCTTaGCAAGAGCATGGACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: IKKNAHIHTLWVPSLTFPLGHPS*QEHGLG Trigger: TCCCAGTCCATGCTCTTGCCAAGATGGGTGTCCTAG...AGGAAAGGTTAAGCTAGGGACCCACAATGTATGTATGTGAGCATTCTTTTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR TCA 90 bp | CATCAAAAGACCACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATCACCAGAGTTTATCTTaGGCTACAGATAGGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HQKTTQQRLQQLISRTEDHQSLS*ATDRGY Trigger: ATAGCCCCTATCTGTAGCTCAAGATAAACTCTGGTG...ATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGTGGTCTTTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGTAAAATACTTTTCCACAGATCACTCGATGCTCTACTCCCTATTCAGACATCTCCTTTATAGATaGTGCCCACATCAGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: SSVKYFSTDHSMLYSLFRHLLYR*CPHQHH Trigger: GTGATGCTGATGTGGGCAGCATCTATAAAGGAGATG...TCTGAATAGGGAGTAGAGCATCGAGTGATCTGTGGAAAAGTATTTTACAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR-3UTR CCA 90 bp | CATTACTACCCTCTATATTGGCTCTATATTTCTGCCTGTGTCACAAAATGTCTCAAGGAAATAAAGAGGTaGTGGTGTCCAGAGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HYYPLYWLYISACVTKCLKEIKR*WCPEVW Trigger: CCACACCTCTGGACACCACCACCTCTTTATTTCCTT...GAGACATTTTGTGACACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTACAGCATATCATATAGCCTTCATGGGTACACCCACCATTAGGATCAAAAAGGGCAAGAGCATGGACTaGGAAATTATCAACCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTAYHIAFMGTPTIRIKKGKSMD*EIINQR Trigger: CCTTTGGTTGATAATTTCCCAGTCCATGCTCTTGCC...CTTTTTGATCCTAATGGTGGGTGTACCCATGAAGGCTATATGATATGCTGTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CCA 90 bp | CACTCTGAGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATGGCACATGATCACATACATACATTGTaGGTCCCTAGCTTAACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HSEYTRTQVQNSAFMAHDHIHTL*VPSLTF Trigger: AAAGGTTAAGCTAGGGACCCACAATGTATGTATGTG...ATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACTCAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CAA 90 bp | TCAGATTGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATaGCACAAAGAGATTGAACTTGAGTGTAATTTTGAAGGAAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SDCIRAILREASLEQ*HKEIELECNFEGKI Trigger: TATTTTTCCTTCAAAATTACACTCAAGTTCAATCTCTTTGTGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR GCA 90 bp | CCATTCGAAGGTAAACTTTATACATACAATAAGCCAAGAAGTAGCCTCAGACTAGCAGCAGGAATAGCATaGACACCAGAGTTTATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PFEGKLYTYNKPRSSLRLAAGIA*TPEFIL Trigger: CAAGATAAACTCTGGTGTGCATGCTATTCCTGCTGC...TAGTCTGAGGCTACTTCTTGGCTTATTGTATGTATAAAGTTTACCTTCGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CAA 90 bp | AGCTATCCTCTGAGTGACAGTTTACCTACATTACTACCCTCTATATaGGCTCTATATTTCTGCCTGTGTCACAAAATGTCTCAATACCAT | + |
|
Preference number: 2 (lower is better) Translates to: SYPLSDSLPTLLPSI*ALYFCLCHKMSQYH Trigger: ATGGTATTGAGACATTTTGTGACACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR GCA 90 bp | TGTACAGGAAGCTATCCTCTGAGTGACAGTTTACCTACATTACTACCCTCTATATTGGCTCTATATTTCTaGCTGTGTCACAAAATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CTGSYPLSDSLPTLLPSILALYF*LCHKMS Trigger: AGACATTTTGTGACACAGGCAGAAATATAGAGCCAA...TATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCTTCCTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | CCCCAGCTCATCCCAACCCTCCTCCAGGTGGCAGACTaGAGAGCCAGCATCACTGCTGGGCATCCACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PQLIPTLLQVAD*RASITAGHPQA Trigger: GGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGGGTTGGGATGAGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | CCTCCTCCAGGTGGCAGACTGGAGAGCCAGCATCACTaGTGGGCATCCACAAGCCTGAGTCTCAGAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPPGGRLESQHH*WASTSLSLRAA Trigger: AGCTGCTCTGAGACTCAGGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | GAACCCCTTGCGGGTGAGCATCTCCTTTATAGATGCTaGCCACATCAGCATCACAGCAGCGGCAGAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EPLAGEHLLYRC*PHQHHSSGRAG Trigger: CCCAGCTCTGCCGCTGCTGTGATGCTGATGTGGGCAGCATCTATAAAGGAGATGCTCACCCGCAAGGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | CCTCCAGGTGGCAGACTGGAGAGCCAGCATCACTGCTaGGCATCCACAAGCCTGAGTCTCAGAGCAGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PPGGRLESQHHC*ASTSLSLRAAY Trigger: ATAAGCTGCTCTGAGACTCAGGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTCCAGTCTGCCACCTGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | TGGAGAGCCAGCATCACTGCTGGGCATCCACAAGCCTaGGTCTCAGAGCAGCTTATGGATAGTCTCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WRASITAGHPQA*VSEQLMDSLPH Trigger: GTGAGGGAGACTATCCATAAGCTGCTCTGAGACTCAGGCTTGTGGATGCCCAGCAGTGATGCTGGCTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATGGGTTGGGGAGTGAATaGCTGACCTGGCAGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AGCETLLLTLRLHVTILHGLGSE*LTWQFF Trigger: GAAAAACTGCCAGGTCAGCAATTCACTCCCCAACCC...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | ACACTGTTGGCCCTAAGAGACACATTTGCTGCTGACTaGGACACCGGGCAGAGTGTGAGTGAGCTCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLLALRDTFAAD*DTGQSVSELNR Trigger: TCTGTTGAGCTCACTCACACTCTGCCCGGTGTCCCAGTCAGCAGCAAATGTGTCTCTTAGGGCCAACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | GGATGTGGCCAGGGAAAGACTGGCTTTTCCACATGGTaGAGTCGTCAATCCCAGATGACAGTGCATCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCGQGKTGFSTW*SRQSQMTVHLL Trigger: CAGGAGATGCACTGTCATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | AGAGTCGTGCATCCTTCACCAGAGGAAGGCTCAAGCTaGAGTGTAGGATGTGGCCAGGGAAAGACTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RVVHPSPEEGSS*SVGCGQGKTGF Trigger: AAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCTTGAGCCTTCCTCTGGTGAAGGATGCACGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | ATGCTGCCCACATCAGCATCACAGCAGCGGCAGAGCTaGGCAACTCCCAGGTCAGAAGAAAGAATGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: MLPTSASQQRQS*ATPRSEERMFT Trigger: TGTGAACATTCTTTCTTCTGACCTGGGAGTTGCCCAGCTCTGCCGCTGCTGTGATGCTGATGTGGGCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | GCCTGCTCAGTACAGTTCCTAGGGAAGTCCATTTCCTaGTCCACTTGGTTTGGCTTGTCCTCGTGGGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: ACSVQFLGKSIS*STWFGLSSWVP Trigger: TGGTACCCACGAGGACAAGCCAAACCAAGTGGATCAGGAAATGGACTTCCCTAGGAACTGTACTGAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | GTAGGATGTGGCCAGGGAAAGACTGGCTTTTCCACATaGTGGAGTCGTCAATCCCAGATGACAGTGCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: VGCGQGKTGFST*WSRQSQMTVHL Trigger: GAGATGCACTGTCATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | CTCAAGCTGGAGTGTAGGATGTGGCCAGGGAAAGACTaGCTTTTCCACATGGTGGAGTCGTCAATCCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LKLECRMWPGKD*LFHMVESSIPD Trigger: ATCTGGGATTGACGACTCCACCATGTGGAAAAGCCAGTCTTTCCCTGGCCACATCCTACACTCCAGCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | ACAGATAGGGGCTATGAGAAGGAAATAAAGAGGTGGTaGTGTCCAGAGGTGTGGAGAGTCTTGCCTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TDRGYEKEIKRW*CPEVWRVLPAQ Trigger: CTGAGCAGGCAAGACTCTCCACACCTCTGGACACCACCACCTCTTTATTTCCTTCTCATAGCCCCTATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | GCTACAGATAGGGGCTATGAGAAGGAAATAAAGAGGTaGTGGTGTCCAGAGGTGTGGAGAGTCTTGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATDRGYEKEIKR*WCPEVWRVLPA Trigger: AGCAGGCAAGACTCTCCACACCTCTGGACACCACCACCTCTTTATTTCCTTCTCATAGCCCCTATCTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | ACCTTTGGCACCCTCTTCCCTTTTTGCCTTTATCCCTaGGGTTTCCAGCCCTCTGTGATTTTTCCATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TFGTLFPFCLYP*GFQPSVIFPFP Trigger: GGGAAATGGAAAAATCACAGAGGGCTGGAAACCCCAGGGATAAAGGCAAAAAGGGAAGAGGGTGCCAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTACAGTTCCTAGGGAAGTCCATTTCCTGATCCACTTGGTTTGGCTTGTCCTCGTGACAGGGACACTGTaGGCCCTAAGAGACACATTT | + |
|
Preference number: 3 (lower is better) Translates to: STVPREVHFLIHLVWLVLVTGTL*ALRDTF Trigger: AAATGTGTCTCTTAGGGCCAACAGTGTCCCTGTCAC...GAGGACAAGCCAAACCAAGTGGATCAGGAAATGGACTTCCCTAGGAACTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | ATTGTATCTCTGACCTTTGGCACCCTCTTCCCTTTTTaGCTTTATCCCTGGGGTTTCCAGCCCTCTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: IVSLTFGTLFPF*LYPWGFQPSVI Trigger: AATCACAGAGGGCTGGAAACCCCAGGGATAAAGGCAAAAAGGGAAGAGGGTGCCAAAGGTCAGAGATACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | TACGGACCGTGGGTGAAGTCTCAGAGGCTGGATAAATaGACTCTGAGTACACAAGGACACAAGTGCAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: YGPWVKSQRLDK*TLSTQGHKCRI Trigger: AATTCTGCACTTGTGTCCTTGTGTACTCAGAGTGCATTTATCCAGCCTCTGAGACTTCACCCACGGTCCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | GTCAGAAGAAAGAATGTTCACACCACAGAGGTCCGGTaGCCAACAAAAGTTTGCGACAGAAGAGTCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRRKNVHTTEVR*PTKVCDRRVVH Trigger: ATGCACGACTCTTCTGTCGCAAACTTTTGTTGGTCACCGGACCTCTGTGGTGTGAACATTCTTTCTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | TTCTGTATTCAGCTGGTGGGTGTTTCAATAAAGGCTTaGAGTTCCCATAGACTGGAGGTGAGAGCCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FCIQLVGVSIKA*SSHRLEVRAIP Trigger: TGGGATGGCTCTCACCTCCAGTCTATGGGAACTTCAAGCCTTTATTGAAACACCCACCAGCTGAATACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | ATTCCCACCAAGGTTTCTCATTCACATTTGTCAGATTaGATACGTGCCATTCTCAGGGAGGCCTCCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IPTKVSHSHLSD*IRAILREASLE Trigger: TTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | CCCTCACATACTAGGACACCCATCTTGGCAAGAGCATaGACTGGGAAATTATCAACCAAAGGATTTCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PSHTRTPILARA*TGKLSTKGFQH Trigger: GTGCTGAAATCCTTTGGTTGATAATTTCCCAGTCCATGCTCTTGCCAAGATGGGTGTCCTAGTATGTGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAAAAGAATGCTCACATACATACATTGTGGGTCCCTAGCTTAACCTTTCCTCCTGATCCACTTGGTTaGGCTTGTCCTCGTGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: IKKNAHIHTLWVPSLTFPPDPLG*ACPRGY Trigger: GTACCCACGAGGACAAGCCAAACCAAGTGGATCAGG...AGGAAAGGTTAAGCTAGGGACCCACAATGTATGTATGTGAGCATTCTTTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | CTGGAGGTGAGAGCCATCCCACCAATTCTTCTTGTTTaGTGCCTGTTTCTAATTCTCCTAGAAGATCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LEVRAIPPILLV*CLFLILLEDPK Trigger: CTTGGGATCTTCTAGGAGAATTAGAAACAGGCATCAAACAAGAAGAATTGGTGGGATGGCTCTCACCTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | CAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTaGCATTCTCAGGGAGGCCTCCCTAGAACAATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QGFSFTFVRLHT*HSQGGLPRTIA Trigger: TGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | TGTACACACCTCTGTCCCAATCCGGTTTGTACACTATaGCACAATGCTTTAGTCTCTCCTGTGATGTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: CTHLCPNPVCTL*HNALVSPVMSY Trigger: ATATGACATCACAGGAGAGACTAAAGCATTGTGGCATAGTGTACAAACCGGATTGGGACAGAGGTGTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | AGTACACAAGGACACAAGTGCAGAATTCAGCTTTTATaGCACATGATGCCAGGATCACATAGAATCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: STQGHKCRIQLL*HMMPGSHRILE Trigger: CTCTAGGATTCTATGTGATCCTGGCATCATGTGCCATAAAAGCTGAATTCTGCACTTGTGTCCTTGTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | GGAGTCTATTCTTTGTACAGGAAGCTATCCTCTGAGTaGCAGTTTACCTACATTACTACCCTCTATATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVYSLYRKLSSE*QFTYITTLYIG Trigger: GCCAATATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCTTCCTGTACAAAGAATAGACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CCA 72 bp | ATTAGGATCAAAAAGAATGCTCACATACATACATTGTaGGTCCCTAGCTTAACCTTTCCTGGTGATGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IRIKKNAHIHTL*VPSLTFPGDVW Trigger: CCACACATCACCAGGAAAGGTTAAGCTAGGGACCCACAATGTATGTATGTGAGCATTCTTTTTGATCCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR-3UTR CAA 90 bp | CCATTCGAAGGTAAACTTTATACATACAATAAGCCAAGAAGTAGCCTCAGACTAAGTCTCTACTCATGGTaGCTGTGTAGCAGAAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PFEGKLYTYNKPRSSLRLSLYSW*LCSRSD Trigger: ATCACTTCTGCTACACAGCAACCATGAGTAGAGACT...TAGTCTGAGGCTACTTCTTGGCTTATTGTATGTATAAAGTTTACCTTCGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | TTTAGGAGTCTATTCTTTGTACAGGAAGCTATCCTCTaGGTGACAGTTTACCTACATTACTACCCTCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: FRSLFFVQEAIL*VTVYLHYYPLY Trigger: ATATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCTTCCTGTACAAAGAATAGACTCCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR TCA 72 bp | AGACTCCAACAACTCATCAGCAGAACTGAAGATGACTaGAATGTTTCTTGGTATTTTAGGAGTCTATTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLQQLISRTEDD*NVSWYFRSLFF Trigger: AAAGAATAGACTCCTAAAATACCAAGAAACATTTCAGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR GCA 72 bp | CCTACATTACTACCCTCTATATTGGCTCTATATTTCTaGCTGTGTCACAAAATGTCTCAATACCATATATTC | + |
|
Preference number: 3 (lower is better) Translates to: PTLLPSILALYF*LCHKMSQYHIF Trigger: GAATATATGGTATTGAGACATTTTGTGACACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTAATGTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR TCA 90 bp | CTGGGACAGTTGACAAAGCTTCACTTGTGGTCCTCATTTGTGACAGGGACACTGGGTACTTGCGCTCGGTaGCTACCAGGGCCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGQLTKLHLWSSFVTGTLGTCAR*LPGPPG Trigger: GCCAGGAGGCCCTGGTAGTCACCGAGCGCAAGTACC...CAGTGTCCCTGTCACAAATGAGGACCACAAGTGAAGCTTTGTCAACTGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR GCA 90 bp | GACACATTTGCTGCTGACTGGGACACCGGGCAGAGTGTGAGTGAGCTCAACAGAGGATGTAGAAGGAGTTaGACTGGCCGTAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTFAADWDTGQSVSELNRGCRRS*TGRSRS Trigger: GCTTCTGCTACGGCCAGTGCAACTCCTTCTACATCC...TCTGTTGAGCTCACTCACACTCTGCCCGGTGTCCCAGTCAGCAGCAAATGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGTGAGACTCTTCTCCTCACCCTCCGGTTACATGTCACCATCCTCCATGACATGCACCGGCAATaGTTCACCTTCTGGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGCETLLLTLRLHVTILHDMHRQ*FTFWIF Trigger: GAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTC...ATGGAGGATGGTGACATGTAACCGGAGGGTGAGGAGAAGAGTCTCACACCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGTAAAATACTTTTCCACAGATCACTCGATGCTCTACTCCCTATTCAGATGTAAGGCGAGGGGATaGCGCCCGCAGGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVKYFSTDHSMLYSLFRCKARG*RPQAGS Trigger: AGAACCGGCCTGCGGGCGCCATCCCCTCGCCTTACA...TCTGAATAGGGAGTAGAGCATCGAGTGATCTGTGGAAAAGTATTTTACAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR TCA 90 bp | TCTTTACAGCTTCCTAGTGACTCCTCTGTACACACCTCTGTCCCAATCCGGTTTACCTCCTTGATCTGGTaGTGCCACCTCTCTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQLPSDSSVHTSVPIRFTSLIW*CHLSEL Trigger: CAACTCAGAGAGGTGGCATCACCAGATCAAGGAGGT...AAACCGGATTGGGACAGAGGTGTGTACAGAGGAGTCACTAGGAAGCTGTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGTAAAATACTTTTCCACAGATCACTCGATGCTCTACTCCCTATTCAGATCCTCGCTCACTGTCTaGCGCAGAGGCTGCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVKYFSTDHSMLYSLFRSSLTV*RRGCVL Trigger: CAAGACGCAGCCTCTGCGGCAGACAGTGAGCGAGGA...TCTGAATAGGGAGTAGAGCATCGAGTGATCTGTGGAAAAGTATTTTACAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CAA 72 bp | GTGACTCCTCTGTACACACCTCTGTCCCAATCCGGTTaGTACACTATGCCACAATGCTTTAGTCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTPLYTPLSQSG*YTMPQCFSLSC Trigger: ACAGGAGAGACTAAAGCATTGTGGCATAGTGTACAAACCGGATTGGGACAGAGGTGTGTACAGAGGAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CAA 72 bp | GATTCCCACCAAGGTTTCTCATTCACATTTGTCAGATaGCATACGTGCCATTCTCAGGGAGGCCTCCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSHQGFSFTFVR*HTCHSQGGLPR Trigger: TCTAGGGAGGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
||
| 3UTR CAA 72 bp | CACATTCGGATTCCCACCAAGGTTTCTCATTCACATTaGTCAGATTGCATACGTGCCATTCTCAGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIRIPTKVSHSH*SDCIRAILREA Trigger: GGCCTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGTGGGAATCCGAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 72 bp | AATTGTATCTCTGACCTTTGGCACCCTCTTCCCTTTTaGCCTTTATCCCTGGGGTTTCCAGCCCTCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: NCISDLWHPLPF*PLSLGFPALCD Trigger: ATCACAGAGGGCTGGAAACCCCAGGGATAAAGGCAAAAAGGGAAGAGGGTGCCAAAGGTCAGAGATACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR GCA 90 bp | TCTTTACAGCTTCCTAGTGACTCCTCTGTACACACCTCTGTCCCAATCCGGTTTTCTCTGAGTTGTTGCTaGTACCATCCTTGTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLQLPSDSSVHTSVPIRFSLSCC*YHPCKA Trigger: CGCCTTACAAGGATGGTAGCAGCAACAACTCAGAGA...AAACCGGATTGGGACAGAGGTGTGTACAGAGGAGTCACTAGGAAGCTGTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CCA 90 bp | ACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGCAGAAAGCGCAGGATTaGAAGGAGTCCTCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TKVSHSHLSDCIRAILREQKAQD*KESSSF Trigger: GAAGGAGGAGGACTCCTTCCAATCCTGCGCTTTCTG...CTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CCA 90 bp | TGTACAGGAAGCTATCCTCTGAGTGACAGTTTACCTACATTACTACCCTCTATAACAGAGGTGACACGCTaGGGCTTGCAGAAAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: CTGSYPLSDSLPTLLPSITEVTR*GLQKAQ Trigger: CTGCGCTTTCTGCAAGCCCCAGCGTGTCACCTCTGT...TATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAGAGGATAGCTTCCTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 72 bp | AGTACAGTTCCTAGGGAAGTCCATTTCCTGATCCACTaGGTTTGGCTTGTCCTCGTGGGTACCAGATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: STVPREVHFLIH*VWLVLVGTRFV Trigger: AACAAATCTGGTACCCACGAGGACAAGCCAAACCAAGTGGATCAGGAAATGGACTTCCCTAGGAACTGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR TCA 90 bp | CATTACTACCCTCTATATTGGCTCTATATTTCTGCCTGTGTCACAAAATGTCTCGTCACTCAGGTTCACTaGCATGCACCGGCAATGCTT | + |
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Preference number: 4 (lower is better) Translates to: HYYPLYWLYISACVTKCLVTQVH*HAPAML Trigger: AAGCATTGCCGGTGCATGTCAGTGAACCTGAGTGAC...GAGACATTTTGTGACACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 72 bp | ACTGGAGGTGAGAGCCATCCCACCAATTCTTCTTGTTaGATGCCTGTTTCTAATTCTCCTAGAAGATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TGGESHPTNSSC*MPVSNSPRRSQ Trigger: TTGGGATCTTCTAGGAGAATTAGAAACAGGCATCAAACAAGAAGAATTGGTGGGATGGCTCTCACCTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR TCA 90 bp | AATAAATTATTTCAAAGTCCTCGCATCAAAAGACCACACAACAGAGACTCCAACGTGATGCCACCTCTCTaGGTTGTTGCTGCTACCATC | + |
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Preference number: 4 (lower is better) Translates to: NKLFQSPRIKRPHNRDSNVMPPL*VVAATI Trigger: GATGGTAGCAGCAACAACTCAGAGAGGTGGCATCAC...GTTGGAGTCTCTGTTGTGTGGTCTTTTGATGCGAGGACTTTGAAATAATTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR GCA 90 bp | AAAAGACCACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATGACTACCTCTCTGAGTTGTTaGTGCTACCATCCTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: KRPHNRDSNNSSAELKMTTSLSC*CYHPCK Trigger: CTTACAAGGATGGTAGCAGCAACAACTCAGAGAGGT...AGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGTGGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 72 bp | ATACGTGCCATTCTCAGGGAGGCCTCCCTAGAACAATaGCACAAAGAGATTGAACTTGAGTGTAATTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: IRAILREASLEQ*HKEIELECNFE Trigger: TTCAAAATTACACTCAAGTTCAATCTCTTTGTGCAATTGTTCTAGGGAGGCCTCCCTGAGAATGGCACGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR TCA 90 bp | AATAAATTATTTCAAAGTCCTCGCATCAAAAGACCACACAACAGAGACTCCAACCCTTCTGGATTTTCTTaGTTCGGAAAGGTGGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: NKLFQSPRIKRPHNRDSNPSGFS*FGKVGR Trigger: TCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGG...GTTGGAGTCTCTGTTGTGTGGTCTTTTGATGCGAGGACTTTGAAATAATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CCA 90 bp | AGTGCATCTCCTGAAAAATCTTGTCGAGTTTCTGGGAGTGGAGTTTTCCAACATCAATGCTTCACCTTCTaGATTTTCTTGATTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SASPEKSCRVSGSGVFQHQCFTF*IFLIRK Trigger: TTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTG...ATGTTGGAAAACTCCACTCCCAGAAACTCGACAAGATTTTTCAGGAGATGCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| 3UTR CAA 72 bp | CTGAGTGACAGTTTACCTACATTACTACCCTCTATATaGGCTCTATATTTCTGCCTGTGTCACAAAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LSDSLPTLLPSI*ALYFCLCHKMS Trigger: AGACATTTTGTGACACAGGCAGAAATATAGAGCCAATATAGAGGGTAGTAATGTAGGTAAACTGTCACTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 90 bp | ACCTCTCTGAGTTGTTGCTGCTACCATCCTTGTAAGGCGAGGGGATaGCGCCCGCAGGCCGGTTCTTCCGTGTTTCAGCTACCTTTACCA | + |
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Preference number: 5 (lower is better) Translates to: TSLSCCCYHPCKARG*RPQAGSSVFQLPLP Trigger: TGGTAAAGGTAGCTGAAACACGGAAGAACCGGCCTGCGGGCGCCATCCCCTCGCCTTACAAGGATGGTAGCAGCAACAACTCAGAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 90 bp | GCACCGGCAATGCTTCACCTTCTGGATTTTCTTGATTCGGAAAGGTaGGTCGAGACCCGGGCATTCGAGCTCTACGATGACAGAGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: APAMLHLLDFLDSER*VETRAFELYDDRGD Trigger: GTCACCTCTGTCATCGTAGAGCTCGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS TCA 90 bp | GGTTCACTGACATGCACCGGCAATGCTTCACCTTCTGGATTTTCTTaGTTCGGAAAGGTGGGTCGAGACCCGGGCATTCGAGCTCTACGA | + |
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Preference number: 5 (lower is better) Translates to: GSLTCTGNASPSGFS*FGKVGRDPGIRALR Trigger: TCGTAGAGCTCGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 90 bp | GAGTCACTCAGGTTCACTGACATGCACCGGCAATGCTTCACCTTCTaGATTTTCTTGATTCGGAAAGGTGGGTCGAGACCCGGGCATTCG | + |
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Preference number: 5 (lower is better) Translates to: ESLRFTDMHRQCFTF*IFLIRKGGSRPGHS Trigger: CGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCTGAGTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS GCA 90 bp | CACTGCTTGTCGGAGTCACTCAGGTTCACTGACATGCACCGGCAATaGTTCACCTTCTGGATTTTCTTGATTCGGAAAGGTGGGTCGAGA | + |
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Preference number: 5 (lower is better) Translates to: HCLSESLRFTDMHRQ*FTFWIFLIRKGGSR Trigger: TCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCTGAGTGACTCCGACAAGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CAA 90 bp | ACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGCGCAGAGGCTGCGTCTaGCACCAGTCACTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TKVSHSHLSDCIRAILRERRGCV*HQSLLR Trigger: CCTCAAGAGTGACTGGTGCAAGACGCAGCCTCTGCG...CTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CAA 90 bp | ACCAAGGTTTCTCATTCACATTTGTCAGATTGCATACGTGCCATTCTCAGGGAGGCAGAAAGCGCAGGATaGGAAGGAGTCCTCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TKVSHSHLSDCIRAILREAESAG*EGVLLL Trigger: AAGGAGGAGGACTCCTTCCAATCCTGCGCTTTCTGC...CTCCCTGAGAATGGCACGTATGCAATCTGACAAATGTGAATGAGAAACCTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CAA 90 bp | TCCTCTGTAAAATACTTTTCCACAGATCACTCGATGCTCTACTCCCTATTCAGATCACTCTTGAGGTACTaGCGCTCGGTGACTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSVKYFSTDHSMLYSLFRSLLRY*RSVTTR Trigger: CCTGGTAGTCACCGAGCGCAAGTACCTCAAGAGTGA...TCTGAATAGGGAGTAGAGCATCGAGTGATCTGTGGAAAAGTATTTTACAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CAA 90 bp | TCCTCTGTAAAATACTTTTCCACAGATCACTCGATGCTCTACTCCCTATTCAGATGCCACCTCTCTGAGTaGTTGCTGCTACCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSVKYFSTDHSMLYSLFRCHLSE*LLLPSL Trigger: CAAGGATGGTAGCAGCAACAACTCAGAGAGGTGGCA...TCTGAATAGGGAGTAGAGCATCGAGTGATCTGTGGAAAAGTATTTTACAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS-3UTR CAA 90 bp | AAAAGACCACACAACAGAGACTCCAACAACTCATCAGCAGAACTGAAGATGACTACCTTCTGGATTTTCTaGATTCGGAAAGGTGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: KRPHNRDSNNSSAELKMTTFWIF*IRKGGS Trigger: CGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGT...AGTCATCTTCAGTTCTGCTGATGAGTTGTTGGAGTCTCTGTTGTGTGGTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CAA 90 bp | CTGCGGCAACCCTCCTCGCTCACTGTCTGCCGCAGAGGCTGCGTCTaGCACCAGTCACTCTTGAGGTACTTGCGCTCGGTGACTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRQPSSLTVCRRGCV*HQSLLRYLRSVTTR Trigger: CCTGGTAGTCACCGAGCGCAAGTACCTCAAGAGTGACTGGTGCAAGACGCAGCCTCTGCGGCAGACAGTGAGCGAGGAGGGTTGCCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CAA 90 bp | CCCGGGCATTCGAGCTCTACGATGACAGAGGTGACACGCTGGGGCTaGCAGAAAGCGCAGGATTGGAAGGAGTCCTCCTCCTTCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: PGHSSSTMTEVTRWG*QKAQDWKESSSFFT Trigger: CGTGAAGAAGGAGGAGGACTCCTTCCAATCCTGCGCTTTCTGCAAGCCCCAGCGTGTCACCTCTGTCATCGTAGAGCTCGAATGCCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 72 bp | AGTTGTTGCTGCTACCATCCTTGTAAGGCGAGGGGATaGCGCCCGCAGGCCGGTTCTTCCGTGTTTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: SCCCYHPCKARG*RPQAGSSVFQL Trigger: TAGCTGAAACACGGAAGAACCGGCCTGCGGGCGCCATCCCCTCGCCTTACAAGGATGGTAGCAGCAACAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CAA 72 bp | GACATGCACCGGCAATGCTTCACCTTCTGGATTTTCTaGATTCGGAAAGGTGGGTCGAGACCCGGGCATTCG | + |
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Preference number: 6 (lower is better) Translates to: DMHRQCFTFWIF*IRKGGSRPGHS Trigger: CGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CAA 90 bp | AGGTTCACTGACATGCACCGGCAATGCTTCACCTTCTGGATTTTCTaGATTCGGAAAGGTGGGTCGAGACCCGGGCATTCGAGCTCTACG | + |
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Preference number: 6 (lower is better) Translates to: RFTDMHRQCFTFWIF*IRKGGSRPGHSSST Trigger: CGTAGAGCTCGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS TCA 72 bp | ACATGCACCGGCAATGCTTCACCTTCTGGATTTTCTTaGTTCGGAAAGGTGGGTCGAGACCCGGGCATTCGA | + |
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Preference number: 6 (lower is better) Translates to: TCTGNASPSGFS*FGKVGRDPGIR Trigger: TCGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 72 bp | ATGCTTCACCTTCTGGATTTTCTTGATTCGGAAAGGTaGGTCGAGACCCGGGCATTCGAGCTCTACGATGAC | + |
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Preference number: 6 (lower is better) Translates to: MLHLLDFLDSER*VETRAFELYDD Trigger: GTCATCGTAGAGCTCGAATGCCCGGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS CCA 72 bp | AGGTTCACTGACATGCACCGGCAATGCTTCACCTTCTaGATTTTCTTGATTCGGAAAGGTGGGTCGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: RFTDMHRQCFTF*IFLIRKGGSRP Trigger: GGGTCTCGACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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| CDS GCA 72 bp | TCGGAGTCACTCAGGTTCACTGACATGCACCGGCAATaGTTCACCTTCTGGATTTTCTTGATTCGGAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SESLRFTDMHRQ*FTFWIFLIRKG Trigger: ACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCTGAGTGACTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055294.4 |
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