Pregenerated sensors for GREM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074934Ensembl transcript IDs: ENSMUST00000099575.4
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTCCTCAGCCTGACCGTTCCTGCGTCAGTCCTCTGTCCCGTTTaGCATCACCACGTGTCTCCCCACATTCTGAAGGTTCTTCACAAG | + |
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Preference number: 1 (lower is better) Translates to: LVLSLTVPASVLCPV*HHHVSPHILKVLHK Trigger: CTTGTGAAGAACCTTCAGAATGTGGGGAGACACGTGGTGATGGCAAACGGGACAGAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | CTGGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTGGGTGTaGCTCTCTCAGCATGGCTATGACAGGCTGAATGTGCCCGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LASRFKPSRNRVVWV*LSQHGYDRLNVPAL Trigger: CAAAGCGGGCACATTCAGCCTGTCATAGCCATGCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | GGCACATGGAACACAATGACAAAGCCAACTACAGCCCTGCCCCTGTaGATGTTTGGGTCCAGTGGTGTGGGCATTTCCGACCATCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: GTWNTMTKPTTALPL*MFGSSGVGISDHLK Trigger: CTTCAGATGGTCGGAAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCTTTGTCATTGTGTTCCATGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | GTTCTTCTGGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTaGGTGTGGCTCTCTCAGCATGGCTATGACAGGCTGAATGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: VLLASRFKPSRNRVV*VWLSQHGYDRLNVP Trigger: GGGCACATTCAGCCTGTCATAGCCATGCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | GCGCATACACTATGCATAAGCAGCCTCCAGCCAGGAAGCAACTGCTaGTTCTTCTGGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: AHTLCISSLQPGSNC*FFWPLGLSQVGIGW Trigger: CCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTGGAGGCTGCTTATGCATAGTGTATGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | AAGCAGAGTAACAGGAAGTGCCTTCTAGCAAAGGCTGTTTCCGGCTaGTGTTTGGAAACACCCACAGGCACCCATGCACACTCATGCGCA | + |
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Preference number: 1 (lower is better) Translates to: KQSNRKCLLAKAVSG*CLETPTGTHAHSCA Trigger: TGCGCATGAGTGTGCATGGGTGCCTGTGGGTGTTTCCAAACACCAGCCGGAAACAGCCTTTGCTAGAAGGCACTTCCTGTTACTCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR TCA 90 bp | CAGTCCTCTGTCCCGTTTGCCATCACCACGTGTCTCCCCACATTCTaGAGGTTCTTCACAAGACAAAAGACTTACACCCGCGGTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: QSSVPFAITTCLPTF*RFFTRQKTYTRGQV Trigger: CACTTGACCGCGGGTGTAAGTCTTTTGTCTTGTGAAGAACCTTCAGAATGTGGGGAGACACGTGGTGATGGCAAACGGGACAGAGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR GCA 90 bp | CATGCGCATACACTATGCATAAGCAGCCTCCAGCCAGGAAGCAACTaGTGGTTCTTCTGGCCTCTAGGTTTAAGCCAAGTAGGAATCGGG | + |
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Preference number: 1 (lower is better) Translates to: HAHTLCISSLQPGSN*WFFWPLGLSQVGIG Trigger: CCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTGGAGGCTGCTTATGCATAGTGTATGCGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | CTATGCATAAGCAGCCTCCAGCCAGGAAGCAACTGCTGGTTCTTCTaGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LCISSLQPGSNCWFF*PLGLSQVGIGWFGC Trigger: ACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTGGAGGCTGCTTATGCATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | GGGAAACAACTTTTAAACTCTAGACATCTCACTACTGAATTTCACTaGCCCAGACTGGTCCTCAGCCTGACCGTTCCTGCGTCAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GKQLLNSRHLTTEFH*PRLVLSLTVPASVL Trigger: GAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAGTCTGGGCCAGTGAAATTCAGTAGTGAGATGTCTAGAGTTTAAAAGTTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | ATTAGTATTCATTCTCAAGTGAAATCCTGGTGCCCAGGAGGCACATaGAACACAATGACAAAGCCAACTACAGCCCTGCCCCTGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: ISIHSQVKSWCPGGT*NTMTKPTTALPLWM Trigger: CATCCACAGGGGCAGGGCTGTAGTTGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR GCA 90 bp | AGAGTTACCTCCCCCATTAGTATTCATTCTCAAGTGAAATCCTGGTaGCCAGGAGGCACATGGAACACAATGACAAAGCCAACTACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RVTSPISIHSQVKSW*PGGTWNTMTKPTTA Trigger: GGCTGTAGTTGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAATGGGGGAGGTAACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR TCA 90 bp | AGTGCGTCCAAAATAAGCGACCGACAGGGCATCTCCAATAAACAATaGAGGACACATATTTCTGATGGTCTCGTTATAGGCACAGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: SASKISDRQGISNKQ*RTHISDGLVIGTAR Trigger: CCTCGCTGTGCCTATAACGAGACCATCAGAAATATGTGTCCTTCATTGTTTATTGGAGATGCCCTGTCGGTCGCTTATTTTGGACGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | CTCAGAGTTACCTCCCCCATTAGTATTCATTCTCAAGTGAAATCCTaGTGCCCAGGAGGCACATGGAACACAATGACAAAGCCAACTACA | + |
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Preference number: 1 (lower is better) Translates to: LRVTSPISIHSQVKS*CPGGTWNTMTKPTT Trigger: TGTAGTTGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAATGGGGGAGGTAACTCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | GGAGATTGCAACTTGTCTCGCCAAAGAACAGTTCTGCTACAATGTTaGAGAGAATGTGCACCATTACGTCACCAGTGCGTCCAAAATAAG | + |
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Preference number: 1 (lower is better) Translates to: GDCNLSRQRTVLLQC*RECAPLRHQCVQNK Trigger: CTTATTTTGGACGCACTGGTGACGTAATGGTGCACATTCTCTCCAACATTGTAGCAGAACTGTTCTTTGGCGAGACAAGTTGCAATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR TCA 90 bp | TCTGAAGGTTCTTCACAAGACAAAAGACTTACACCCGCGGTCAAGTaGATTAATTTAGGAACATGGGCTACGACTGAGATGTCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SEGSSQDKRLTPAVK*INLGTWATTEMSGR Trigger: TCTCCCTGACATCTCAGTCGTAGCCCATGTTCCTAAATTAATTCACTTGACCGCGGGTGTAAGTCTTTTGTCTTGTGAAGAACCTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR TCA 90 bp | GATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTACAAATaGAACTCACAGGCTGGGCTTGTGCAAATTCATTTAGTGTGGATT | + |
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Preference number: 1 (lower is better) Translates to: DMEDSEIRGRSTQYK*NSQAGLVQIHLVWI Trigger: AATCCACACTAAATGAATTTGCACAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR GCA 90 bp | ACTTTCAAAGTTAGACCCACTGTTTTGGGAATTGAAGATAGCATTTaGCTTACAATATGGTTCCTGCTTAGATGTCACATGGGAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TFKVRPTVLGIEDSI*LTIWFLLRCHMGVG Trigger: GCCCACTCCCATGTGACATCTAAGCAGGAACCATATTGTAAGGCAAATGCTATCTTCAATTCCCAAAACAGTGGGTCTAACTTTGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR TCA 90 bp | CTTTACTTCCAATGGTTCTTTGACTGTGGTATCTTTGATGGGCAGTaGATGTCTGCCTTCCAAATGACATATAACTTGACTAGTCACTCT | + |
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Preference number: 1 (lower is better) Translates to: LYFQWFFDCGIFDGQ*MSAFQMTYNLTSHS Trigger: AGAGTGACTAGTCAAGTTATATGTCATTTGGAAGGCAGACATTCACTGCCCATCAAAGATACCACAGTCAAAGAACCATTGGAAGTAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR GCA 90 bp | TCCTCTCTTATTTTTCTCTCTTCACTACCCTCCAAAGTCTGCATTTaGATTTGTGAGCCTAATCTAATCCATCCTGTGACTTATTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SSLIFLSSLPSKVCI*ICEPNLIHPVTYWL Trigger: TAGCCAATAAGTCACAGGATGGATTAGATTAGGCTCACAAATGCAAATGCAGACTTTGGAGGGTAGTGAAGAGAGAAAAATAAGAGAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CCA 90 bp | TTGAAGAATACCATTGCAAAGAAGCACTCAGACTTACACGGTATGTaGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGA | + |
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Preference number: 1 (lower is better) Translates to: LKNTIAKKHSDLHGM*FSSFNAKHKLKAIR Trigger: TCTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGTAAGTCTGAGTGCTTCTTTGCAATGGTATTCTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR GCA 90 bp | AAAGAAGCACTCAGACTTACACGGTATGTGGTTTTCCTCTTTCAATaGCAAGCACAAATTGAAGGCCATAAGATTCATATTTGGTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: KEALRLTRYVVFLFQ*QAQIEGHKIHIWFL Trigger: CAGAAACCAAATATGAATCTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGTAAGTCTGAGTGCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCACTGGCCCAGACTGGTCCTCAGCCTGACCGTTCCTGCGTCAGTCCTCTGTTCTCAAGTGAAATCCTaGTGCCCAGGAGGCACATGG | + |
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Preference number: 2 (lower is better) Translates to: FHWPRLVLSLTVPASVLCSQVKS*CPGGTW Trigger: CCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGA...ACAGAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAGTCTGGGCCAGTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CAA 90 bp | ACTGGTCCTCAGCCTGACCGTTCCTGCGTCAGTCCTCTGTCCCGTTaGCCATCACCACGTGTCTCCCCACATTCTGAAGGTTCTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: TGPQPDRSCVSPLSR*PSPRVSPHSEGSSQ Trigger: TTGTGAAGAACCTTCAGAATGTGGGGAGACACGTGGTGATGGCAAACGGGACAGAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGATTCGGGGAAGGAGCACTCAGTACAAATGAAACTCACAGGCTGGGCTTGGAAAGGGATGGGCTATaGGAGCATAGGGCGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: QRFGEGALSTNETHRLGLERDGL*EHRAST Trigger: AGTGCTCGCCCTATGCTCCCATAGCCCATCCCTTTC...CAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTAGTCCTCTGTCCCGTTTaGCATCACCACGTGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVVLCPV*HHHVSP Trigger: GGGAGACACGTGGTGATGGCAAACGGGACAGAGGAC...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTCAGCCAGGAAGCAACTaGTGGTTCTTCTGGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEAQPGSN*WFFWPL Trigger: TAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTG...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTCCAGGAAGCAACTGCTaGTTCTTCTGGCCTCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEAPGSNC*FFWPLG Trigger: ACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGG...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGACCCACAGGCACCCATaGACACTCATGCGCATACAC | + |
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Preference number: 2 (lower is better) Translates to: LTQMQQVALHLTLFLVDRTHRHP*TLMRIH Trigger: GTGTATGCGCATGAGTGTGCATGGGTGCCTGTGGGT...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGCGGGTGGTTTGGGTGTaGCTCTCTCAGCATGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LTQMQQVALHLTLFLVDRRVVWV*LSQHGY Trigger: ATAGCCATGCTGAGAGAGCCACACCCAAACCACCCG...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR TCA 90 bp | AATGAAGTGAGGCAAACACAGCCCTTACTTCTCCAGACACTACCTAGCCTCTCTGTATTCATTCTCAAGTaGAATCCTGGTGCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: NEVRQTQPLLLQTLPSLSVFILK*NPGAQE Trigger: CTCCTGGGCACCAGGATTTCACTTGAGAATGAATAC...AGAGAGGCTAGGTAGTGTCTGGAGAAGTAAGGGCTGTGTTTGCCTCACTTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACACACCCGCGGTCAAGTaGATTAATTTAGGAACATGG | + |
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Preference number: 2 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYTPAVK*INLGTW Trigger: CCATGTTCCTAAATTAATTCACTTGACCGCGGGTGT...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | CTAGTAGGCATAATGGTTACAATGCCACATAGATCCACTGGGAATAGGTGGACTCAAGTGAAATCCTGGTaGCCAGGAGGCACATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LVGIMVTMPHRSTGNRWTQVKSW*PGGTWN Trigger: GTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTG...AGTCCACCTATTCCCAGTGGATCTATGTGGCATTGTAACCATTATGCCTACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACAACTGCTGGTTCTTCTaGCCTCTAGGTTTAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYNCWFF*PLGLSQ Trigger: TTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTT...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGTTTCCGGCTGGTGTTTaGAAACACCCACAGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKFPAGV*KHPQAP Trigger: GGGTGCCTGTGGGTGTTTCCAAACACCAGCCGGAAA...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGCATGCGCATACACTATaGATAAGCAGCCTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTQMQQVALHLTLFLVDRHAHTL*ISSLQP Trigger: TGGCTGGAGGCTGCTTATGCATAGTGTATGCGCATG...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGGGGCCTCAAGAAACAGAGTAACAGGAAGTaGCTTCTAGCAAAGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: SRWLFILHCFLLTGGLKKQSNRK*LLAKAV Trigger: AACAGCCTTTGCTAGAAGGCACTTCCTGTTACTCTG...TTTCTTGAGGCCCCCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGTGCCCAGGAGGCACATaGAACACAATGACAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTQMQQVALHLTLFLVDRCPGGT*NTMTKP Trigger: TGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCA...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTCTCAAATGCAGCAGGTaGCTCTTCATCTTACACTGT | + |
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Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEALKCSR*LFILHC Trigger: ACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAG...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTTCACATTCCACACGGTaGAAACTATCCTTTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEASHSTR*KLSFPP Trigger: TGGAGGAAAGGATAGTTTCCACCGTGTGGAATGTGA...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTAGTAGGTCACAGAAGCTaGCACAGAGAATTGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVVGHRS*HRELGF Trigger: AAAACCCAATTCTCTGTGCCAGCTTCTGTGACCTAC...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTTGTACCCTAGTGTGCTaGTTTCCTAATGGAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEACTLVC*FPNGTF Trigger: GAAAGTTCCATTAGGAAACCAGCACACTAGGGTACA...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CATATTTCTGATGGTCTCGTTATAGGCACAGCGAGGAAGGCAGACATCCCTGTCCATCCTGTGACTTATTaGCTATGGATATGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: HISDGLVIGTARKADIPVHPVTY*LWIWKT Trigger: AGTCTTCCATATCCATAGCCAATAAGTCACAGGATG...GACAGGGATGTCTGCCTTCCTCGCTGTGCCTATAACGAGACCATCAGAAATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR TCA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGAGCACTCAGTACAAATaGAACTCACAGGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKSTQYK*NSQAGL Trigger: AAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCT...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACATTTGCCTTACAATATaGTTCCTGCTTAGATGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYICLTI*FLLRCH Trigger: GTGACATCTAAGCAGGAACCATATTGTAAGGCAAAT...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTAATACTGCATGTTTGTaGCAGAATTTAGACGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVSSNMQGPDSSLPNSEANTACL*QNLDVA Trigger: TGCCACGTCTAAATTCTGCCACAAACATGCAGTATT...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR TCA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGTGTCTCCCCACATTCTaGAGGTTCTTCACAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKCLPTF*RFFTRQ Trigger: TTGTCTTGTGAAGAACCTTCAGAATGTGGGGAGACA...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGGGGCCTCAAGAAAATTAATTTAGGAACATaGGCTACGACTGAGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRWLFILHCFLLTGGLKKINLGT*ATTEMS Trigger: TGACATCTCAGTCGTAGCCCATGTTCCTAAATTAAT...TTTCTTGAGGCCCCCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CAA 90 bp | ACTGCATGTTTGTGGCAGAATTTAGACGTGGCATGTTTCTCAGCATaGTCATTTTTCATCTCTGGTGTGGTCCTACATTTTCAGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TACLWQNLDVACFSA*SFFISGVVLHFQLP Trigger: AGGAAGCTGAAAATGTAGGACCACACCAGAGATGAAAAATGACAATGCTGAGAAACATGCCACGTCTAAATTCTGCCACAAACATGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CCA 90 bp | CTAGTAGGCATAATGGTTACAATGCCACATAGATCCACTGGGAATAGGTGGACTTTTCCTCTGTGTGTCTaGGTTCTTTTAAATATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVGIMVTMPHRSTGNRWTFPLCV*VLLNIR Trigger: CCTGATATTTAAAAGAACCCAGACACACAGAGGAAA...AGTCCACCTATTCCCAGTGGATCTATGTGGCATTGTAACCATTATGCCTACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTATTAGACCCACTGTTTTaGGAATTGAAGATAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVLDPLF*ELKIAF Trigger: AAATGCTATCTTCAATTCCCAAAACAGTGGGTCTAA...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CAA 90 bp | CCGAAGGACTTTGAATTCCTAATTACATTAAATAACCATAACTTTTaGCTTATTCACATTCCACACGGTGGAAACTATCCTTTCCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PKDFEFLITLNNHNF*LIHIPHGGNYPFLQ Trigger: CTGGAGGAAAGGATAGTTTCCACCGTGTGGAATGTGAATAAGCAAAAAGTTATGGTTATTTAATGTAATTAGGAATTCAAAGTCCTTCGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR GCA 72 bp | TCACTGGCCCAGACTGGTCCTCAGCCTGACCGTTCCTaGGTCAGTCCTCTGTCCCGTTTGCCATCACCACGT | + |
|
Preference number: 3 (lower is better) Translates to: SLAQTGPQPDRS*VSPLSRLPSPR Trigger: ACGTGGTGATGGCAAACGGGACAGAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAGTCTGGGCCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAACTACAGCCCTGCCCCTGTGGATGTTTGGGTCCAGTGGTGTGGGCATTTGTTTCCGGCTGGTGTTaGGAAACACCCACAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: SQLQPCPCGCLGPVVWAFVSGWC*ETPTGT Trigger: GGTGCCTGTGGGTGTTTCCAAACACCAGCCGGAAAC...AAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | AGCAGCCTCCAGCCAGGAAGCAACTGCTGGTTCTTCTaGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLQPGSNCWFF*PLGLSQVGIGW Trigger: CCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTGGAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | GCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTaGGTGTGGCTCTCTCAGCATGGCTATGACAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASRFKPSRNRVV*VWLSQHGYDRL Trigger: CAGCCTGTCATAGCCATGCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | AACAGGAAGTGCCTTCTAGCAAAGGCTGTTTCCGGCTaGTGTTTGGAAACACCCACAGGCACCCATGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: NRKCLLAKAVSG*CLETPTGTHAH Trigger: GTGTGCATGGGTGCCTGTGGGTGTTTCCAAACACCAGCCGGAAACAGCCTTTGCTAGAAGGCACTTCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | CATTCTCAAGTGAAATCCTGGTGCCCAGGAGGCACATaGAACACAATGACAAAGCCAACTACAGCCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HSQVKSWCPGGT*NTMTKPTTALP Trigger: GGGCAGGGCTGTAGTTGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | GTCCCGTTTGCCATCACCACGTGTCTCCCCACATTCTaGAGGTTCTTCACAAGACAAAAGACTTACACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: VPFAITTCLPTF*RFFTRQKTYTR Trigger: GCGGGTGTAAGTCTTTTGTCTTGTGAAGAACCTTCAGAATGTGGGGAGACACGTGGTGATGGCAAACGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR GCA 72 bp | GGCATTTCCGACCATCTGAAGCAGAGTAACAGGAAGTaGCTTCTAGCAAAGGCTGTTTCCGGCTGGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GISDHLKQSNRK*LLAKAVSGWCL Trigger: CAAACACCAGCCGGAAACAGCCTTTGCTAGAAGGCACTTCCTGTTACTCTGCTTCAGATGGTCGGAAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | AGGTTTAAGCCAAGTAGGAATCGGGTGGTTTGGGTGTaGCTCTCTCAGCATGGCTATGACAGGCTGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: RFKPSRNRVVWV*LSQHGYDRLNV Trigger: CACATTCAGCCTGTCATAGCCATGCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | TTCTGGCCTCTAGGTTTAAGCCAAGTAGGAATCGGGTaGTTTGGGTGTGGCTCTCTCAGCATGGCTATGACA | + |
|
Preference number: 3 (lower is better) Translates to: FWPLGLSQVGIG*FGCGSLSMAMT Trigger: TGTCATAGCCATGCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGGCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | CTATGCATAAGCAGCCTCCAGCCAGGAAGCAACTGCTaGTTCTTCTGGCCTCTAGGTTTAAGCCAAGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCISSLQPGSNC*FFWPLGLSQVG Trigger: TCCTACTTGGCTTAAACCTAGAGGCCAGAAGAACCAGCAGTTGCTTCCTGGCTGGAGGCTGCTTATGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | CTCTCCCTCTCCCTCTCTCTCTCCCTCCCTCTCCTCTaGTTCTCTCCTATAACAAAAGCCAAACAGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLSLSLPLL*FSPITKAKQKR Trigger: CCTTTTCTGTTTGGCTTTTGTTATAGGAGAGAATCAGAGGAGAGGGAGGGAGAGAGAGAGGGAGAGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | CTTTTAAACTCTAGACATCTCACTACTGAATTTCACTaGCCCAGACTGGTCCTCAGCCTGACCGTTCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: LLNSRHLTTEFH*PRLVLSLTVPA Trigger: CGCAGGAACGGTCAGGCTGAGGACCAGTCTGGGCCAGTGAAATTCAGTAGTGAGATGTCTAGAGTTTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTAGGCATAATGGTTACAATGCCACATAGATCCACTGGGAATAGGTGGACTGAACAAGGCTCTCAGTaGTCCTTCAGAGAGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVGIMVTMPHRSTGNRWTEQGSQ*SFREAK Trigger: CTTTGCCTCTCTGAAGGACAACTGAGAGCCTTGTTC...AGTCCACCTATTCCCAGTGGATCTATGTGGCATTGTAACCATTATGCCTACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | TCAGAGTTACCTCCCCCATTAGTATTCATTCTCAAGTaGAATCCTGGTGCCCAGGAGGCACATGGAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SELPPPLVFILK*NPGAQEAHGTQ Trigger: TTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAATGGGGGAGGTAACTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | ACTAAGCTTAGGAGGTTTTGCCTTCTCTTACCCCAGTaGACAAGGCTCTCAGTTGTCCTTCAGAGAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKLRRFCLLLPQ*TRLSVVLQRGK Trigger: TTTGCCTCTCTGAAGGACAACTGAGAGCCTTGTTCACTGGGGTAAGAGAAGGCAAAACCTCCTAAGCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | ACAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTaGTGTGCTTTTAGGATACTTAGGCTGCTGATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TARKADIPVFDQ*CAFRILRLLIV Trigger: AACTATCAGCAGCCTAAGTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR GCA 72 bp | TCCCCCATTAGTATTCATTCTCAAGTGAAATCCTGGTaGCCAGGAGGCACATGGAACACAATGACAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPISIHSQVKSW*PGGTWNTMTKP Trigger: TGGCTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAATGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | ACCTCCCCCATTAGTATTCATTCTCAAGTGAAATCCTaGTGCCCAGGAGGCACATGGAACACAATGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSPISIHSQVKS*CPGGTWNTMTK Trigger: CTTTGTCATTGTGTTCCATGTGCCTCCTGGGCACCAGGATTTCACTTGAGAATGAATACTAATGGGGGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | AACTTGTCTCGCCAAAGAACAGTTCTGCTACAATGTTaGAGAGAATGTGCACCATTACGTCACCAGTGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: NLSRQRTVLLQC*RECAPLRHQCV Trigger: GACGCACTGGTGACGTAATGGTGCACATTCTCTCCAACATTGTAGCAGAACTGTTCTTTGGCGAGACAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | GACTCAGAGATTCGGGGAAGGAGCACTCAGTACAAATaGAACTCACAGGCTGGGCTTGTGCAAATTCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: DSEIRGRSTQYK*NSQAGLVQIHL Trigger: TAAATGAATTTGCACAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | GGGAAGGAGCACTCAGTACAAATGAAACTCACAGGCTaGGCTTGTGCAAATTCATTTAGTGTGGATTCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GKEHSVQMKLTG*ACANSFSVDSS Trigger: TGACGAATCCACACTAAATGAATTTGCACAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTCTCTAGCAACATGCAAGGGCCTGATTCTTCTTTGCCCAACTCAGAGGCTCCACTGTTTTGGGAATaGAAGATAGCATTTGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KVSSNMQGPDSSLPNSEAPLFWE*KIAFAL Trigger: TAAGGCAAATGCTATCTTCAATTCCCAAAACAGTGG...AGCCTCTGAGTTGGGCAAAGAAGAATCAGGCCCTTGCATGTTGCTAGAGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGCAGACATCCCTGTCTTaGACCAGTGATGTGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKQTSLS*TSDVLL Trigger: TAAAAGCACATCACTGGTCAAAGACAGGGATGTCTG...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | TCTTCACAAGACAAAAGACTTACACCCGCGGTCAAGTaGATTAATTTAGGAACATGGGCTACGACTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSQDKRLTPAVK*INLGTWATTEM Trigger: CATCTCAGTCGTAGCCCATGTTCCTAAATTAATTCACTTGACCGCGGGTGTAAGTCTTTTGTCTTGTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | AAAATAAGCGACCGACAGGGCATCTCCAATAAACAATaGAGGACACATATTTCTGATGGTCTCGTTATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KISDRQGISNKQ*RTHISDGLVIG Trigger: GCCTATAACGAGACCATCAGAAATATGTGTCCTTCATTGTTTATTGGAGATGCCCTGTCGGTCGCTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR CCA 72 bp | ACCATTGCAAAGAAGCACTCAGACTTACACGGTATGTaGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TIAKKHSDLHGM*FSSFNAKHKLK Trigger: CTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGTAAGTCTGAGTGCTTCTTTGCAATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR-3UTR CAA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGACTTCCAATGGTTCTTaGACTGTGGTATCTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKTSNGS*TVVSLM Trigger: CATCAAAGATACCACAGTCAAAGAACCATTGGAAGT...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR TCA 72 bp | CAATGGTTCTTTGACTGTGGTATCTTTGATGGGCAGTaGATGTCTGCCTTCCAAATGACATATAACTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: QWFFDCGIFDGQ*MSAFQMTYNLT Trigger: AGTCAAGTTATATGTCATTTGGAAGGCAGACATTCACTGCCCATCAAAGATACCACAGTCAAAGAACCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR GCA 72 bp | CTCAGACTTACACGGTATGTGGTTTTCCTCTTTCAATaGCAAGCACAAATTGAAGGCCATAAGATTCATATT | + |
|
Preference number: 3 (lower is better) Translates to: LRLTRYVVFLFQ*QAQIEGHKIHI Trigger: AATATGAATCTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGTAAGTCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| 3UTR GCA 72 bp | TTAAGTCAAATTAGCTTTTATGAGACCATTAAATCCTaGCTCGCCCTTATCCAAAGCAAATTCCATCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSQISFYETIKS*LALIQSKFHHS Trigger: GCTATGATGGAATTTGCTTTGGATAAGGGCGAGGCAGGATTTAATGGTCTCATAAAAGCTAATTTGACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | AATGAAGTGAGGCAAACACAGCCCTTACTTCTCCAGACACTACCTAGCCTCTCTCCCGCCCCCGGGTCCTaGAGCCAGGTTGTGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEVRQTQPLLLQTLPSLSPAPGS*SQVVVG Trigger: CCCCACCACAACCTGGCTCCAGGACCCGGGGGCGGG...AGAGAGGCTAGGTAGTGTCTGGAGAAGTAAGGGCTGTGTTTGCCTCACTTCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | TTTCACTGGCCCAGACTGGTCCTCAGCCTGACCGTTCCTGCGTCAGTCCTCTGTGGTTGTGGTGGGGACTaGGTCTGCTCAGAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FHWPRLVLSLTVPASVLCGCGGD*VCSESL Trigger: CAATGACTCTGAGCAGACCCAGTCCCCACCACAACC...ACAGAGGACTGACGCAGGAACGGTCAGGCTGAGGACCAGTCTGGGCCAGTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCTTCTAGCAAAGGCTGTTTCCGGCTGGTGTTTGGAAACACCCACAGGCCCTGGAGCCAGGTTGTaGTGGGGACTGGGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCLLAKAVSGWCLETPTGPGARL*WGLGLL Trigger: GAGCAGACCCAGTCCCCACCACAACCTGGCTCCAGG...GCCTGTGGGTGTTTCCAAACACCAGCCGGAAACAGCCTTTGCTAGAAGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTGGGTGTGGCTCTCTCAGCTTGCGCTCTGTCACGTaGAGGGCCTCTTGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGLSQVGIGWFGCGSLSLRSVT*RASWLD Trigger: GTCCAGCCAAGAGGCCCTGCACGTGACAGAGCGCAA...GCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGCCTCCTCTCCAGGCATaGCGGTGCCCCGCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQMQQVALHLTLFLVDRPPLQA*RCPAPG Trigger: GCCAGGGGCGGGGCACCGCCATGCCTGGAGAGGAGG...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCTTCTAGCAAAGGCTGTTTCCGGCTGGTGTTTGGAAACACCCACAGGCAGCCCTCCTCGTGGATaGTCTGCTTCAGGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLAKAVSGWCLETPTGSPPRG*SASGAE Trigger: CTCAGCCCCTGAAGCAGACCATCCACGAGGAGGGCT...GCCTGTGGGTGTTTCCAAACACCAGCCGGAAACAGCCTTTGCTAGAAGGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR GCA 90 bp | AGCCAACTACAGCCCTGCCCCTGTGGATGTTTGGGTCCAGTGGTGTGGGCATTTGATATGCAACGGCACTaGTTCACGCGTGTGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLQPCPCGCLGPVVWAFDMQRH*FTRVTL Trigger: AAGGGTCACACGCGTGAAGCAGTGCCGTTGCATATC...AAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | AGCCAACTACAGCCCTGCCCCTGTGGATGTTTGGGTCCAGTGGTGTGGGCATTTGGCGGAATGGCTCCTTaGGAACCTTTCTTTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLQPCPCGCLGPVVWAFGGMAP*EPFFFP Trigger: GGGGAAAAAGAAAGGTTCCCAAGGAGCCATTCCGCC...AAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | CAGAGATTCGGGGAAGGAGCACTCAGTACAAATGAAACTCACAGGCTGGGCTTGACGTGCAGGGCCTCTTaGCTGGACTCAAGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRFGEGALSTNETHRLGLTCRAS*LDSSTS Trigger: GGAGGTGCTTGAGTCCAGCCAAGAGGCCCTGCACGT...CAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | CATATTTCTGATGGTCTCGTTATAGGCACAGCGAGGAAGGCAGACATCCCTGTCGGAGCCAGGTTGTGGTaGGGACTGGGTCTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HISDGLVIGTARKADIPVGARLW*GLGLLR Trigger: TCTGAGCAGACCCAGTCCCCACCACAACCTGGCTCC...GACAGGGATGTCTGCCTTCCTCGCTGTGCCTATAACGAGACCATCAGAAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGGTTTAAGCCAAGTAGGAATCGGGTGGTTTGGGTGTGGCTCTCTCAGCTGTCAGGAGGCGGAATaGCTCCTTGGGAACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGLSQVGIGWFGCGSLSCQEAE*LLGNLS Trigger: AGAAAGGTTCCCAAGGAGCCATTCCGCCTCCTGACA...GCTGAGAGAGCCACACCCAAACCACCCGATTCCTACTTGGCTTAAACCTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
||
| CDS-3UTR TCA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACTCAGAGTCATTGTGCTaGGCCTTGTCAGGAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYSESLC*ALSGGG Trigger: TCCGCCTCCTGACAAGGCTCAGCACAATGACTCTGA...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTATTGCAGCCCTCCTCGTaGATGGTCTGCTTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVLQPSS*MVCFRG Trigger: GCCCCTGAAGCAGACCATCCACGAGGAGGGCTGCAA...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR TCA 90 bp | CAGAGATTCGGGGAAGGAGCACTCAGTACAAATGAAACTCACAGGCTGGGCTTGCAGAAGGAGCAAGACTaGAAGGACCCTTCCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QRFGEGALSTNETHRLGLQKEQD*KDPSSF Trigger: AAAGGAGGAAGGGTCCTTTCAGTCTTGCTCCTTCTG...CAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR TCA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACACTGCTTCACGCGTGTaGCCCTTTTCTTCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYTASRV*PFSSWW Trigger: CCACCAAGAAGAAAAGGGTCACACGCGTGAAGCAGT...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR GCA 90 bp | AGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGGGGCCTCAAGAAACCAAGTCGATGGATATaGAACGGCACTGCTTCACGC | + |
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Preference number: 4 (lower is better) Translates to: SRWLFILHCFLLTGGLKKPSRWI*NGTASR Trigger: GCGTGAAGCAGTGCCGTTGCATATCCATCGACTTGG...TTTCTTGAGGCCCCCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTACCCTTTTCTTCTTGGTaGGTGGCTGTAGCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVPFSSW*VAVAQD Trigger: GTCCTGAGCTACAGCCACCCACCAAGAAGAAAAGGG...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR TCA 90 bp | ACACGGTATGTGGTTTTCCTCTTTCAATGCCAAGCACAAATTGAAGGCCATAAGGTCTGCTTCAGGGGCTaGGTTTTGCACCAATCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TRYVVFLFQCQAQIEGHKVCFRG*VLHQSR Trigger: GCGAGATTGGTGCAAAACTCAGCCCCTGAAGCAGAC...CTTATGGCCTTCAATTTGTGCTTGGCATTGAAAGAGGAAAACCACATACCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CCA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGCCTTTCGGATGTGCCTaGGGATGTAGAAGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LTQMQQVALHLTLFLVDRPFGCA*GCRRSC Trigger: GCAACTCCTTCTACATCCCCAGGCACATCCGAAAGG...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR GCA 90 bp | CTTATTGGCTATGGATATGGAAGACTCAGAGATTCGGGGAAGGAGCACTCAGTATCAGGGGCTGAGTTTTaGACCAATCTCGCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LIGYGYGRLRDSGKEHSVSGAEF*TNLASD Trigger: ATCTGAAGCGAGATTGGTGCAAAACTCAGCCCCTGA...TACTGAGTGCTCCTTCCCCGAATCTCTGAGTCTTCCATATCCATAGCCAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| 3UTR CAA 72 bp | CAACTTGTCTCGCCAAAGAACAGTTCTGCTACAATGTaGGAGAGAATGTGCACCATTACGTCACCAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: QLVSPKNSSATM*ERMCTITSPVR Trigger: ACGCACTGGTGACGTAATGGTGCACATTCTCTCCAACATTGTAGCAGAACTGTTCTTTGGCGAGACAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | AGCCAACTACAGCCCTGCCCCTGTGGATGTTTGGGTCCAGTGGTGTGGGCATTTTCTCGCTTCAGATACTaGCGCTCTGTCACGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SQLQPCPCGCLGPVVWAFSRFRY*RSVTCR Trigger: CCTGCACGTGACAGAGCGCAAGTATCTGAAGCGAGA...AAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS GCA 90 bp | TCTGCTTCAGGGGCTGAGTTTTGCACCAATCTCGCTTCAGATACTTaGGCTCTGTCACGTGCAGGGCCTCTTGGCTGGACTCAAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: SASGAEFCTNLASDT*ALSRAGPLGWTQAP Trigger: AGGTGCTTGAGTCCAGCCAAGAGGCCCTGCACGTGACAGAGCGCAAGTATCTGAAGCGAGATTGGTGCAAAACTCAGCCCCTGAAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | CAGCGAGGAAGGCAGACATCCCTGTCTTTGACCAGTGATGTGCTTTTAGGATACCACGTGCAGGGCCTCTaGGCTGGACTCAAGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: QRGRQTSLSLTSDVLLGYHVQGL*AGLKHL Trigger: GAGGTGCTTGAGTCCAGCCAAGAGGCCCTGCACGTG...GTATCCTAAAAGCACATCACTGGTCAAAGACAGGGATGTCTGCCTTCCTCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | CAGAGATTCGGGGAAGGAGCACTCAGTACAAATGAAACTCACAGGCTGGGCTTGATGATAGTGCGGCTGTaGCAGCCCTCCTCGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: QRFGEGALSTNETHRLGLMIVRL*QPSSWM Trigger: CATCCACGAGGAGGGCTGCAACAGCCGCACTATCAT...CAAGCCCAGCCTGTGAGTTTCATTTGTACTGAGTGCTCCTTCCCCGAATCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | AGCCAACTACAGCCCTGCCCCTGTGGATGTTTGGGTCCAGTGGTGTGGGCATTTATGGTGGTGAACTTCTaGGGCTTGCAGAAGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SQLQPCPCGCLGPVVWAFMVVNF*GLQKEQ Trigger: TTGCTCCTTCTGCAAGCCCAAGAAGTTCACCACCAT...AAATGCCCACACCACTGGACCCAAACATCCACAGGGGCAGGGCTGTAGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | AGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGGGGCCTCAAGAAAAGGCGGAATGGCTCCTaGGGAACCTTTCTTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SRWLFILHCFLLTGGLKKRRNGS*GTFLFP Trigger: GGGAAAAAGAAAGGTTCCCAAGGAGCCATTCCGCCT...TTTCTTGAGGCCCCCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | CTAGTAGGCATAATGGTTACAATGCCACATAGATCCACTGGGAATAGGTGGACTGTGACCCTTTTCTTCTaGGTGGGTGGCTGTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LVGIMVTMPHRSTGNRWTVTLFF*VGGCSS Trigger: TGAGCTACAGCCACCCACCAAGAAGAAAAGGGTCAC...AGTCCACCTATTCCCAGTGGATCTATGTGGCATTGTAACCATTATGCCTACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS-3UTR CAA 90 bp | CTAACTCAAATGCAGCAGGTGGCTCTTCATCTTACACTGTTTCTTGTTGACAGGTGTAGCTCAGGACAGTaGAGTGTGACCATCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LTQMQQVALHLTLFLVDRCSSGQ*SVTIMV Trigger: CACCATGATGGTCACACTCAACTGTCCTGAGCTACA...CCTGTCAACAAGAAACAGTGTAAGATGAAGAGCCACCTGCTGCATTTGAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS GCA 72 bp | GGGGCTGAGTTTTGCACCAATCTCGCTTCAGATACTTaGGCTCTGTCACGTGCAGGGCCTCTTGGCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: GAEFCTNLASDT*ALSRAGPLGWT Trigger: AGTCCAGCCAAGAGGCCCTGCACGTGACAGAGCGCAAGTATCTGAAGCGAGATTGGTGCAAAACTCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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| CDS TCA 72 bp | AGTCGATGGATATGCAACGGCACTGCTTCACGCGTGTaGCCCTTTTCTTCTTGGTGGGTGGCTGTAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SRWICNGTASRV*PFSSWWVAVAQ Trigger: CTGAGCTACAGCCACCCACCAAGAAGAAAAGGGTCACACGCGTGAAGCAGTGCCGTTGCATATCCATCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099575.4 |
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