Pregenerated sensors for GREB1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042942Ensembl transcript IDs: ENSMUST00000048977.16, ENSMUST00000172532.8, ENSMUST00000172680.3
Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTCCAGTGAGCAGCAGCCGCCTCGGGTGCAAGGTTCGGGCGCCTaGGATGGGGTCTGGCTGGTTGCTGTAGTCAGCGTGGTGCTGCCG | + |
|
Preference number: 1 (lower is better) Translates to: GSSEQQPPRVQGSGA*DGVWLVAVVSVVLP Trigger: CGGCAGCACCACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACCCGAGGCGGCTGCTGCTCACTGGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | GCCTCGGGTGCAAGGTTCGGGCGCCTGAGATGGGGTCTGGCTGGTTaGTGTAGTCAGCGTGGTGCTGCCGGGCTGAGGTCCACTGGCGGT | + |
|
Preference number: 1 (lower is better) Translates to: ASGARFGRLRWGLAG*CSQRGAAGLRSTGG Trigger: ACCGCCAGTGGACCTCAGCCCGGCAGCACCACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACCCGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | TTGTGCAGGCCTGGTCGCAGGGAGCTCACCCAGGCCACATCAGCATaGGGCAGCAAGGACGAGGAGGATGGCAGCCTGCCGCCCTTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LCRPGRRELTQATSA*GSKDEEDGSLPPFW Trigger: CCAGAAGGGCGGCAGGCTGCCATCCTCCTCGTCCTTGCTGCCCCATGCTGATGTGGCCTGGGTGAGCTCCCTGCGACCAGGCCTGCACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | CCAAGGAGTCACACTCCTGCTTCAGGATCTCCCCGACCACAGCGGTaGTGGCAGAGACCCCTTCATCCAGCCGAATGCTGCTGGTGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: PRSHTPASGSPRPQR*WQRPLHPAECCWWG Trigger: CCCCCACCAGCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGTGTGACTCCTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | GAGGTGGTGCTACTGGCCATCGGAGGGTCCAAGGAGTCACACTCCTaGTTCAGGATCTCCCCGACCACAGCGGTGCTGGCAGAGACCCCT | + |
|
Preference number: 1 (lower is better) Translates to: EVVLLAIGGSKESHS*FRISPTTAVLAETP Trigger: AGGGGTCTCTGCCAGCACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGTGTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | AGGGCTGTGTGCAGGCCCCGGGGCTGCCTTGACCACGCAAGAGCCTaGGCACTCGAGGATGAGGATGAAGAAGGCTTGGAGGTGGTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: RAVCRPRGCLDHARA*ALEDEDEEGLEVVL Trigger: TAGCACCACCTCCAAGCCTTCTTCATCCTCATCCTCGAGTGCCCAGGCTCTTGCGTGGTCAAGGCAGCCCCGGGGCCTGCACACAGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | AGGCCACATCAGCATGGGGCAGCAAGGACGAGGAGGATGGCAGCCTaGCGCCCTTCTGGGATCCCAGCAGGCTGTATGCGGCTTTGGATA | + |
|
Preference number: 1 (lower is better) Translates to: RPHQHGAARTRRMAA*RPSGIPAGCMRLWI Trigger: TATCCAAAGCCGCATACAGCCTGCTGGGATCCCAGAAGGGCGGCAGGCTGCCATCCTCCTCGTCCTTGCTGCCCCATGCTGATGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GCATGGGGCAGCAAGGACGAGGAGGATGGCAGCCTGCCGCCCTTCTaGGATCCCAGCAGGCTGTATGCGGCTTTGGATAAGATGATCACG | + |
|
Preference number: 1 (lower is better) Translates to: AWGSKDEEDGSLPPF*DPSRLYAALDKMIT Trigger: CGTGATCATCTTATCCAAAGCCGCATACAGCCTGCTGGGATCCCAGAAGGGCGGCAGGCTGCCATCCTCCTCGTCCTTGCTGCCCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | TTGTCTCGCACTTCCTGCAGCCGCTCCTTGGCCAGCATCGCCAGCTaGACAGAAGGCACTCTGATGACGAGCATGTGTCCCTTCCCGCTT | + |
|
Preference number: 1 (lower is better) Translates to: LSRTSCSRSLASIAS*TEGTLMTSMCPFPL Trigger: AAGCGGGAAGGGACACATGCTCGTCATCAGAGTGCCTTCTGTGCAGCTGGCGATGCTGGCCAAGGAGCGGCTGCAGGAAGTGCGAGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | CCTTCATCCAGCCGAATGCTGCTGGTGGGGGTCAGAAGCTGCTGCTaGGGTTTGCCAGCCGTGCTAGAAGAACTCACCCCATTCTCCATG | + |
|
Preference number: 1 (lower is better) Translates to: PSSSRMLLVGVRSCC*GLPAVLEELTPFSM Trigger: CATGGAGAATGGGGTGAGTTCTTCTAGCACGGCTGGCAAACCCCAGCAGCAGCTTCTGACCCCCACCAGCAGCATTCGGCTGGATGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GTAATAAAGGGACTGCTCCTCGCTGCTCATGTCTTTGTGCAGGCCTaGTCGCAGGGAGCTCACCCAGGCCACATCAGCATGGGGCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: VIKGLLLAAHVFVQA*SQGAHPGHISMGQQ Trigger: TTGCTGCCCCATGCTGATGTGGCCTGGGTGAGCTCCCTGCGACCAGGCCTGCACAAAGACATGAGCAGCGAGGAGCAGTCCCTTTATTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GGGCACTCGAGGATGAGGATGAAGAAGGCTTGGAGGTGGTGCTACTaGCCATCGGAGGGTCCAAGGAGTCACACTCCTGCTTCAGGATCT | + |
|
Preference number: 1 (lower is better) Translates to: GHSRMRMKKAWRWCY*PSEGPRSHTPASGS Trigger: AGATCCTGAAGCAGGAGTGTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCAAGCCTTCTTCATCCTCATCCTCGAGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | ATCCAGTGGACCTCGTTGCTGGAGCTGATTCGAGACTGTTGGGTCTaGAGTGTGTATGGGAAGGAGCTCACCTGGAGCACCAGGAGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: IQWTSLLELIRDCWV*SVYGKELTWSTRRL Trigger: CAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GAGGTGATAAGGTCGTCCATAATGCTGAGCGTTTCTGGTGTGCTGTaGTCTCGGAGGGACGCCATAGTGGTGAGAGCCATCAAGGCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: EVIRSSIMLSVSGVL*SRRDAIVVRAIKAS Trigger: GGAGGCCTTGATGGCTCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCATTATGGACGACCTTATCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | CTCGTTGCTGGAGCTGATTCGAGACTGTTGGGTCTGCAGTGTGTATaGGAAGGAGCTCACCTGGAGCACCAGGAGGTTGAAAGCTTCGAG | + |
|
Preference number: 1 (lower is better) Translates to: LVAGADSRLLGLQCV*EGAHLEHQEVESFE Trigger: CTCGAAGCTTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | AGTTGTATCCAGTGGACCTCGTTGCTGGAGCTGATTCGAGACTGTTaGGTCTGCAGTGTGTATGGGAAGGAGCTCACCTGGAGCACCAGG | + |
|
Preference number: 1 (lower is better) Translates to: SCIQWTSLLELIRDC*VCSVYGKELTWSTR Trigger: CCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | AGCTTCTCGCAGCCTGCGTCCTCCATTGTATCCAGTTGTATCCAGTaGACCTCGTTGCTGGAGCTGATTCGAGACTGTTGGGTCTGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SFSQPASSIVSSCIQ*TSLLELIRDCWVCS Trigger: ACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGGACGCAGGCTGCGAGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GAGGGTGCTCACCATCTTCTCAAAGGTCTCATCGCATCTCAGGAGTaGGCTGGTGATCCCCCACTGCAGAGACTTGCTGTACTCATCCAA | + |
|
Preference number: 1 (lower is better) Translates to: EGAHHLLKGLIASQE*AGDPPLQRLAVLIQ Trigger: TTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGAGAAGATGGTGAGCACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | TTTTCCTGGGGAGGTGATAAGGTCGTCCATAATGCTGAGCGTTTCTaGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGTGAGAGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: FSWGGDKVVHNAERF*CAVVSEGRHSGESH Trigger: ATGGCTCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCATTATGGACGACCTTATCACCTCCCCAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 90 bp | AGGCATTTTGCTGAAGGTCTCGATGTCAGGCCAGGGCTCTCCCTCTaGCTGGCTCAGTTCGCTGTCATCGCTGTGATCTGTGTTTATCTC | + |
|
Preference number: 1 (lower is better) Translates to: RHFAEGLDVRPGLSL*LAQFAVIAVICVYL Trigger: GAGATAAACACAGATCACAGCGATGACAGCGAACTGAGCCAGTCAGAGGGAGAGCCCTGGCCTGACATCGAGACCTTCAGCAAAATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | TCAAAGGTCTCATCGCATCTCAGGAGTGGGCTGGTGATCCCCCACTaGAGAGACTTGCTGTACTCATCCAAGCCAAAGTACAGCTTCTCG | + |
|
Preference number: 1 (lower is better) Translates to: SKVSSHLRSGLVIPH*RDLLYSSKPKYSFS Trigger: CGAGAAGCTGTACTTTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | ATAGAGCTGGACTTCTTCTCCCAGCATAGAAGAAGAGAACGTGAATaGGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGGGTGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: IELDFFSQHRRRERE*VKGGIGHLGGRGEG Trigger: GCCTTCACCCCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCTATGCTGGGAGAAGAAGTCCAGCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 90 bp | CCTCCATTGTATCCAGTTGTATCCAGTGGACCTCGTTGCTGGAGCTaGTTCGAGACTGTTGGGTCTGCAGTGTGTATGGGAAGGAGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: PPLYPVVSSGPRCWS*FETVGSAVCMGRSS Trigger: TGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 90 bp | TCACCATCTTCTCAAAGGTCTCATCGCATCTCAGGAGTGGGCTGGTaGTCCCCCACTGCAGAGACTTGCTGTACTCATCCAAGCCAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: SPSSQRSHRISGVGW*SPTAETCCTHPSQS Trigger: ACTTTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGAGAAGATGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | ATTGACCTGAACCTGGGTCCTGTCAGCAGAACTGAAGGAGGACAGTaGCCCCAAAGACCTTGGTCACATTTGGGGAGTTCTTTGGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: IDLNLGPVSRTEGGQ*PQRPWSHLGSSLEK Trigger: CTTCTCCAAAGAACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCTGACAGGACCCAGGTTCAGGTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CCA 90 bp | ATTCGAGACTGTTGGGTCTGCAGTGTGTATGGGAAGGAGCTCACCTaGAGCACCAGGAGGTTGAAAGCTTCGAGAACTTCTCTGCAATTA | + |
|
Preference number: 1 (lower is better) Translates to: IRDCWVCSVYGKELT*STRRLKASRTSLQL Trigger: TAATTGCAGAGAAGTTCTCGAAGCTTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 90 bp | TATTTTCGGTATAGTGGCATCTCATATTCTTTGACTACCAGGAGGTaGAGGTGGCTGATGCCCTCCATGGCGTGGAAAAGGTTTAGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: YFRYSGISYSLTTRR*RWLMPSMAWKRFRS Trigger: GCTCCTAAACCTTTTCCACGCCATGGAGGGCATCAGCCACCTTCACCTCCTGGTAGTCAAAGAATATGAGATGCCACTATACCGAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 90 bp | CACAGTACTTTAAGGACCTGGGGAAAGTTTCTCCAAGAGGGTCCTTaGCAGTCAATATCACTATGCAGGGCAGACCTTCCAAGTCTTGAT | + |
|
Preference number: 1 (lower is better) Translates to: HSTLRTWGKFLQEGP*QSISLCRADLPSLD Trigger: ATCAAGACTTGGAAGGTCTGCCCTGCATAGTGATATTGACTGGCAAGGACCCTCTTGGAGAAACTTTCCCCAGGTCCTTAAAGTACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 90 bp | GCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTaGGGAGTTCTTTGGAGAAGAGATAAATATGTTGCACTTTGCTCC | + |
|
Preference number: 1 (lower is better) Translates to: AELKEDSAPKDLGHI*GVLWRRDKYVALCS Trigger: GGAGCAAAGTGCAACATATTTATCTCTTCTCCAAAGAACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 90 bp | GTGGTATGGCATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTaGAAGTGGGAAAGACAAAGGAGTTCAGCTCAGAGAACCTTCATA | + |
|
Preference number: 1 (lower is better) Translates to: VVWHNCRVHHCMLKD*KWERQRSSAQRTFI Trigger: TATGAAGGTTCTCTGAGCTGAACTCCTTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTATGCCATACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CCA 90 bp | AGGGTTCAGGCCTCAAATGTTAATCTTCAAGTCATTCCACACCAGTaGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGT | + |
|
Preference number: 1 (lower is better) Translates to: RVQASNVNLQVIPHQ*CISCNTFRLVNADS Trigger: ACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAATGACTTGAAGATTAACATTTGAGGCCTGAACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 90 bp | AAGTTTAGTTTACATTCAATATTAACCTGTGTGAACTGTCACACATaGCAAGGTTCAACAGGTCTGCAGGTAAGTTACCAGGTTTGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: KFSLHSILTCVNCHT*QGSTGLQVSYQVCP Trigger: AGGGCAAACCTGGTAACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAATATTGAATGTAAACTAAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 90 bp | AACACACCAAGACATGAATTAACAAGTCATGGTGGCCTGGGCTTGTaGAATTTCATCCTTAAAGAGGACCTAGCATTCTCTAAAGAATTA | + |
|
Preference number: 1 (lower is better) Translates to: NTPRHELTSHGGLGL*NFILKEDLAFSKEL Trigger: TAATTCTTTAGAGAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACTTGTTAATTCATGTCTTGGTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | AGCGGTGCTGGCAGAGACCCCTTCATCCAGCCGAATGCTGCTGGTGGGGGTCAGCGCACGACCATGCTATaGAGCCGGGGGTACCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SGAGRDPFIQPNAAGGGQRTTML*SRGYLS Trigger: GGAGAGGTACCCCCGGCTGCATAGCATGGTCGTGCG...CTGACCCCCACCAGCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGCACCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCAAGGTTCGGGCGCCTGAGATGGGGTCTGGCTGGTTGCTGTAGTCAGCGTCCTCTCAGCCTCCTTTaGACTGAGGTCCAGGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GARFGRLRWGLAGCCSQRPLSLL*TEVQGS Trigger: GCTGCCCTGGACCTCAGTGCAAAGGAGGCTGAGAGG...ACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGGGTCCAAGGAGTCACACTCCTGCTTCAGGATCTCCCCGACCACAGCGGTGCCGAATGCTGCTGGTaGGGGTCAGAAGCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RRVQGVTLLLQDLPDHSGAECCW*GSEAAA Trigger: AGCAGCAGCTTCTGACCCCCACCAGCAGCATTCGGC...ACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGTGTGACTCCTTGGACCCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCAAGGTTCGGGCGCCTGAGATGGGGTCTGGCTGGTTGCTGTAGTCAGCGTGACCACGCAAGAGCCTaGGCACTCGAGGATGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GARFGRLRWGLAGCCSQRDHARA*ALEDED Trigger: ATCCTCATCCTCGAGTGCCCAGGCTCTTGCGTGGTC...ACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCAAGGTTCGGGCGCCTGAGATGGGGTCTGGCTGGTTGCTGTAGTCAGCGTCTCCATGATGGAACCTaGGGTTCCTGTGACAGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: GARFGRLRWGLAGCCSQRLHDGT*GSCDSA Trigger: AGCGCTGTCACAGGAACCTCAGGTTCCATCATGGAG...ACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAGAAGGCTTGGAGGTGGTGCTACTGGCCATCGGAGGGTCCAAGGAGTCACACAGTGAGTTTCAACAGTaGGTTCGGAGGCGGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EEGLEVVLLAIGGSKESHSEFQQ*VRRRGS Trigger: GGAGCCCCGCCTCCGAACTCACTGTTGAAACTCACT...GTGTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCAAGCCTTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGGTCCAAGGAGTCACACTCCTGCTTCAGGATCTCCCCGACCACAGCGGTGTCACCCCATTCTCCATaGTGGAACCTGAGGTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGSKESHSCFRISPTTAVSPHSP*WNLRFL Trigger: CAGGAACCTCAGGTTCCATCATGGAGAATGGGGTGA...CACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGTGTGACTCCTTGGACCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCACTGTAGACCAGGCTCATCAGACGGTACTTGGGGTCGTGTACACTGACGTCGTGGTGCTGCCGGGCTaGGGTCCACTGGCGGTAATA | + |
|
Preference number: 2 (lower is better) Translates to: LTVDQAHQTVLGVVYTDVVVLPG*GPLAVI Trigger: TATTACCGCCAGTGGACCTCAGCCCGGCAGCACCAC...GACGTCAGTGTACACGACCCCAAGTACCGTCTGATGAGCCTGGTCTACAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGCCTGCCGCCCTTCTGGGATCCCAGCAGGCTGTATGCGGCTTTGGATAAGCTGGTGATCCCCCACTaGAGAGACTTGCTGTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: GSLPPFWDPSRLYAALDKLVIPH*RDLLYS Trigger: TGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAG...CTTATCCAAAGCCGCATACAGCCTGCTGGGATCCCAGAAGGGCGGCAGGCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | TCATCGCATCTCAGGAGTGGGCTGGTGATCCCCCACTGCAGAGACTaGCTGTACTCATCCAAGCCAAAGTACAGCTTCTCGCAGCCTGCG | + |
|
Preference number: 2 (lower is better) Translates to: SSHLRSGLVIPHCRD*LYSSKPKYSFSQPA Trigger: CGCAGGCTGCGAGAAGCTGTACTTTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAGCGTTTCTGGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGTGAGACCGAGTACTGCTGGATaGGTAGATAGCAGCGCACGA | + |
|
Preference number: 2 (lower is better) Translates to: MLSVSGVLWSRRDAIVVRPSTAG*VDSSAR Trigger: TCGTGCGCTGCTATCTACTCATCCAGCAGTACTCGG...TCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGAAGAGAACGTGAATGCGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGCGACCACAGCGGTGCTaGCAGAGACCCCTTCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: RRRERECVKGGIGHLGGRRPQRC*QRPLHP Trigger: TGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCG...CCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | ATCAGACGGTACTTGGGGTCGTGTACACTGACGTCGAAAGGCATTTaGCTGAAGGTCTCGATGTCAGGCCAGGGCTCTCCCTCTGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: IRRYLGSCTLTSKGI*LKVSMSGQGSPSDW Trigger: CCAGTCAGAGGGAGAGCCCTGGCCTGACATCGAGACCTTCAGCAAAATGCCTTTCGACGTCAGTGTACACGACCCCAAGTACCGTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGGGAGGTGATAAGGTCGTCCATAATGCTGAGCGTTTCTGGTGTGCTGTGGCCTCGTTGCTGGAGCTaGTTCGAGACTGTTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PGEVIRSSIMLSVSGVLWPRCWS*FETVGS Trigger: AGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGG...CCACAGCACACCAGAAACGCTCAGCATTATGGACGACCTTATCACCTCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCAGAGACCCCTTCATCCAGCCGAATGCTGCTGGTGGGGGTCAGAAGCTGAGTCGGGTTACAAAGTaGGTTTCAACAGTGAGTTCG | + |
|
Preference number: 2 (lower is better) Translates to: AGRDPFIQPNAAGGGQKLSRVTK*VSTVSS Trigger: CGAACTCACTGTTGAAACTCACTTTGTAACCCGACT...CAGCTTCTGACCCCCACCAGCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAACCAGGGGCAGCCGCATGCTTTCCAGATGTCTGCCCTGCTTGCTGAAGACATGGGGTCGTGTACACTaGCGTCGAAAGGCATTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: ETRGSRMLSRCLPCLLKTWGRVH*RRKAFC Trigger: GCAAAATGCCTTTCGACGTCAGTGTACACGACCCCA...TGTCTTCAGCAAGCAGGGCAGACATCTGGAAAGCATGCGGCTGCCCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | CAGCCTGCGTCCTCCATTGTATCCAGTTGTATCCAGTGGACCTCGTaGCTGGAGCTGATTCGAGACTGTTGGGTCTGCAGTGTGTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: QPASSIVSSCIQWTS*LELIRDCWVCSVYG Trigger: CCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGGACGCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCCGAGGGATCCACTCGTCCTGGTCATTTCCTCTCCAGGTCTTTAGTCGGGTTCGAGACTGTTGGGTCTaGAGTGTGTATGGGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VRGIHSSWSFPLQVFSRVRDCWV*SVYGKE Trigger: CTCCTTCCCATACACACTGCAGACCCAACAGTCTCG...AACCCGACTAAAGACCTGGAGAGGAAATGACCAGGACGAGTGGATCCCTCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGTTCATGGCGACCACTGGAAGGAGTGAAAATAGGACTCTTGACTGCATTGCCAGGCCCACCTCCTaGTCCAAGGCCGTTCGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PMFMATTGRSENRTLDCIARPTS*SKAVRV Trigger: AACTCGAACGGCCTTGGAGCAGGAGGTGGGCCTGGC...AATGCAGTCAAGAGTCCTATTTTCACTCCTTCCAGTGGTCGCCATGAACATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGGGGTTTGCCAGCCGTGCTAGAAGAACTCACCCCATTCTCCATGATGGAAGGGAAGGAGCTCACCTaGAGCACCAGGAGGTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CWGLPAVLEELTPFSMMEGKELT*STRRLK Trigger: TTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCC...TTCCATCATGGAGAATGGGGTGAGTTCTTCTAGCACGGCTGGCAAACCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | GCCAAAGTACAGCTTCTCGCAGCCTGCGTCCTCCATTGTATCCAGTaGTATCCAGTGGACCTCGTTGCTGGAGCTGATTCGAGACTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: AKVQLLAACVLHCIQ*YPVDLVAGADSRLL Trigger: CAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGGACGCAGGCTGCGAGAAGCTGTACTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | GAAACCAGGGGCAGCCGCATGCTTTCCAGATGTCTGCCCTGCTTGCTGAAGACACTCCAAGAGGGTCCTTaGCAGTCAATATCACTATGC | + |
|
Preference number: 2 (lower is better) Translates to: ETRGSRMLSRCLPCLLKTLQEGP*QSISLC Trigger: GCATAGTGATATTGACTGGCAAGGACCCTCTTGGAG...TGTCTTCAGCAAGCAGGGCAGACATCTGGAAAGCATGCGGCTGCCCCTGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTAGTCCTTCTCCCACTCCAAGGGCACTCTTACCCACGCCTGCATTATTACAGGCCACATCAGCATaGGGCAGCAAGGACGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VFSPSPTPRALLPTPALLQATSA*GSKDEE Trigger: CTCCTCGTCCTTGCTGCCCCATGCTGATGTGGCCTG...TAATAATGCAGGCGTGGGTAAGAGTGCCCTTGGAGTGGGAGAAGGACTAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCATGTTCATGGCGACCACTGGAAGGAGTGAAAATAGGACTCTTGACTGCATTGTGGAATCGGACATCTaGGAGGCAGGGGTGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PMFMATTGRSENRTLDCIVESDI*EAGVKA Trigger: GGCCTTCACCCCTGCCTCCCAGATGTCCGATTCCAC...AATGCAGTCAAGAGTCCTATTTTCACTCCTTCCAGTGGTCGCCATGAACATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGAAGAGAACGTGAATGCGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGACCTCTCCAAGAGGGTaGTCACCATCTTCTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRERECVKGGIGHLGGRTSPRG*SPSSQR Trigger: CCTTTGAGAAGATGGTGAGCACCCTCTTGGAGAGGT...CCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | GTCCTTGCCAGTCAATATCACTATGCAGGGCAGACCTTCCAAGTCTaGATATGTCCGAGGGATCCACTCGTCCTGGTCATTTCCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VLASQYHYAGQTFQV*ICPRDPLVLVISSP Trigger: TGGAGAGGAAATGACCAGGACGAGTGGATCCCTCGGACATATCAAGACTTGGAAGGTCTGCCCTGCATAGTGATATTGACTGGCAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | CCATTCTCCATGATGGAACCTGAGGTTCCTGTGACAGCGCTACTGTaGCTCTGTGGCCTTTCCAAATCGATGAGCAGCTCCTCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: PFSMMEPEVPVTALL*LCGLSKSMSSSSES Trigger: TGATTCTGAGGAGCTGCTCATCGATTTGGAAAGGCCACAGAGCAACAGTAGCGCTGTCACAGGAACCTCAGGTTCCATCATGGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | GTCTGCAGTGTGTATGGGAAGGAGCTCACCTGGAGCACCAGGAGGTaGAAAGCTTCGAGAACTTCTCTGCAATTAATAACTCGATCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: VCSVYGKELTWSTRR*KASRTSLQLITRSA Trigger: GGCTGATCGAGTTATTAATTGCAGAGAAGTTCTCGAAGCTTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 90 bp | TTCTCGTTGCCGGGGCTCCTCCACTTTGTATTCCTTTATTACTTCTaGCTTGATGCCAGCCAGCTTCTCACTGTAGACCAGGCTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSLPGLLHFVFLYYF*LDASQLLTVDQAHQ Trigger: CTGATGAGCCTGGTCTACAGTGAGAAGCTGGCTGGCATCAAGCAAGAAGTAATAAAGGAATACAAAGTGGAGGAGCCCCGGCAACGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGAAGAGAACGTGAATGCGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGCAGTCAATATCACTATaGAGGGCAGACCTTCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRRERECVKGGIGHLGGRQSISL*RADLPS Trigger: ACTTGGAAGGTCTGCCCTGCATAGTGATATTGACTG...CCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCTGCCCCCAAAGACCTTaGTCACATTTGGGGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLCPQRP*SHLGSS Trigger: AGAACTCCCCAAATGTGACCAAGGTCTTTGGGGGCA...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTATGTGGGTTTCCAGGTaGTCACTTTTAACCAACACA | + |
|
Preference number: 2 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSMWVSR*SLLTNT Trigger: TGTGTTGGTTAAAAGTGAGCACCTGGAAACCCACAT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTAATGCACACAATGTCTaGTCTGCAGTTACTGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSNAHNV*SAVTDF Trigger: AAAGTCAGTAACTGCAGAGCAGACATTGTGTGCATT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTACCTCTTTGCTGAAATaGTGCTGTTCTAAAGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSTSLLK*CCSKAK Trigger: CTTAGCTTTAGAACAGCAGCATTTCAGCAAAGAGGT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTGACCTTGGTCACATTTaGGGAGTTCTTTGGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVDLGHI*GVLWRR Trigger: TCTTCTCCAAAGAACTCCCCAAATGTGACCAAGGTC...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCCTCCTGTGGAAATTTTaGCAAAGGTTTCAATACATA | + |
|
Preference number: 2 (lower is better) Translates to: SHGGLGLCNFILKEDLAFLLWKF*QRFQYI Trigger: TATGTATTGAAACCTTTGGCAAAATTTCCACAGGAG...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAGATCTGAAGAGAAACTaGGGGTTCAGGCCTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: TLPANFNESTSMSLKDSSDLKRN*GFRPQM Trigger: CATTTGAGGCCTGAACCCTCAGTTTCTCTTCAGATC...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTTACTCACTGAGTTGTTaGAGGATGCTAAGCCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: NHKKQLHELQPKLDYSISYSLSC*RMLSLS Trigger: GCTCAGGCTTAGCATCCTTCAACAACTCAGTGAGTA...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAGTAACACATTCAGGCTaGTTAATGCTGACAGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: TLPANFNESTSMSLKDSSVTHSG*LMLTVP Trigger: GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTAC...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTCTCAGCGTGATATGTaGGTTTCCAGGTGCTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQSQRDM*VSRCSL Trigger: AAGTGAGCACCTGGAAACCCACATATCACGCTGAGA...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 90 bp | CAAGCCTTAATGAAGTTAGGCTTTGGAGACAAAGAGGCAGGTAAATaGAGCTTTCTCAACTATTGGAGTGATGGCCTTTTGGTTTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: QALMKLGFGDKEAGK*SFLNYWSDGLLVLF Trigger: GAATAAAACCAAAAGGCCATCACTCCAATAGTTGAGAAAGCTCAATTTACCTGCCTCTTTGTCTCCAAAGCCTAACTTCATTAAGGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGGCATAACTGCAGAGTaGATCACTGTATGCTTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPGITAE*ITVCLK Trigger: CTTTAAGCATACAGTGATGCACTCTGCAGTTATGCC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGATCATACACATGGGCTaGGAAAAATCCACAAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQIIHMG*EKSTNQ Trigger: CTGGTTTGTGGATTTTTCTCAGCCCATGTGTATGAT...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTATACATCCCATCCTCTaGCTAGCTGTAAAGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NHKKQLHELQPKLDYSISIHPIL*LAVKFL Trigger: CAAGAACTTTACAGCTAGTCAGAGGATGGGATGTAT...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCACACTTTGCTCCACAGTaGTTGTACTTTAAAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPHFAPQ*LYFKGK Trigger: TTTTCCTTTAAAGTACAATCACTGTGGAGCAAAGTG...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAATCATTTCAGACCCCTaGGTAATACTGTACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLPANFNESTSMSLKDSSIISDP*VILYQS Trigger: ACTTTGGTACAGTATTACTCAGGGGTCTGAAATGAT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTGTATGCTTAAAGACTaGAAGTGGGAAAGACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQCMLKD*KWERQR Trigger: CCTTTGTCTTTCCCACTTGCAGTCTTTAAGCATACA...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCTATGGTCTGTTTTCTaGCCCACTCATTTTTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: NHKKQLHELQPKLDYSISLWSVF*PTHFYV Trigger: CACATAAAAATGAGTGGGGCAGAAAACAGACCATAG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACTAAAAGACTCTTCATaGAATTTTCTTTACTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: KQWLSWYYLHWFCSAKEELKDSS*NFLYLG Trigger: CCCCAAGTAAAGAAAATTCCATGAAGAGTCTTTTAG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTAAATATGTTGCACTTTaGTCCACAGTGATTGTACTT | + |
|
Preference number: 2 (lower is better) Translates to: NHKKQLHELQPKLDYSISKYVAL*STVIVL Trigger: AAGTACAATCACTGTGGAGCAAAGTGCAACATATTT...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CCA 72 bp | CCTGGTCGCAGGGAGCTCACCCAGGCCACATCAGCATaGGGCAGCAAGGACGAGGAGGATGGCAGCCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: PGRRELTQATSA*GSKDEEDGSLP Trigger: CGGCAGGCTGCCATCCTCCTCGTCCTTGCTGCCCCATGCTGATGTGGCCTGGGTGAGCTCCCTGCGACCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | GAGCAGCAGCCGCCTCGGGTGCAAGGTTCGGGCGCCTaGGATGGGGTCTGGCTGGTTGCTGTAGTCAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: EQQPPRVQGSGA*DGVWLVAVVSV Trigger: CACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACCCGAGGCGGCTGCTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | CAGCATGGGGCAGCAAGGACGAGGAGGATGGCAGCCTaGCGCCCTTCTGGGATCCCAGCAGGCTGTATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: QHGAARTRRMAA*RPSGIPAGCMR Trigger: CCGCATACAGCCTGCTGGGATCCCAGAAGGGCGGCAGGCTGCCATCCTCCTCGTCCTTGCTGCCCCATGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | GCAAGGTTCGGGCGCCTGAGATGGGGTCTGGCTGGTTaGTGTAGTCAGCGTGGTGCTGCCGGGCTGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ARFGRLRWGLAG*CSQRGAAGLRS Trigger: GGACCTCAGCCCGGCAGCACCACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | GCAGCCGCCTCGGGTGCAAGGTTCGGGCGCCTGAGATaGGGTCTGGCTGGTTGCTGTAGTCAGCGTGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AAASGARFGRLR*GLAGCCSQRGA Trigger: AGCACCACGCTGACTACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAACCTTGCACCCGAGGCGGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | TGCAGGCCCCGGGGCTGCCTTGACCACGCAAGAGCCTaGGCACTCGAGGATGAGGATGAAGAAGGCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CRPRGCLDHARA*ALEDEDEEGLE Trigger: CTCCAAGCCTTCTTCATCCTCATCCTCGAGTGCCCAGGCTCTTGCGTGGTCAAGGCAGCCCCGGGGCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | CACACTCCTGCTTCAGGATCTCCCCGACCACAGCGGTaGTGGCAGAGACCCCTTCATCCAGCCGAATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTPASGSPRPQR*WQRPLHPAECC Trigger: GCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | ACTCCTGCTTCAGGATCTCCCCGACCACAGCGGTGCTaGCAGAGACCCCTTCATCCAGCCGAATGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TPASGSPRPQRC*QRPLHPAECCW Trigger: CCAGCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCGGGGAGATCCTGAAGCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | ACTTCCTGCAGCCGCTCCTTGGCCAGCATCGCCAGCTaGACAGAAGGCACTCTGATGACGAGCATGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSCSRSLASIAS*TEGTLMTSMCP Trigger: GGGACACATGCTCGTCATCAGAGTGCCTTCTGTGCAGCTGGCGATGCTGGCCAAGGAGCGGCTGCAGGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | AAGCGATACTGCAGACCCAGCTTGTCTCGCACTTCCTaGAGCCGCTCCTTGGCCAGCATCGCCAGCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KRYCRPSLSRTS*SRSLASIASCT Trigger: TGTGCAGCTGGCGATGCTGGCCAAGGAGCGGCTGCAGGAAGTGCGAGACAAGCTGGGTCTGCAGTATCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | AGCCGAATGCTGCTGGTGGGGGTCAGAAGCTGCTGCTaGGGTTTGCCAGCCGTGCTAGAAGAACTCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRMLLVGVRSCC*GLPAVLEELTP Trigger: TGGGGTGAGTTCTTCTAGCACGGCTGGCAAACCCCAGCAGCAGCTTCTGACCCCCACCAGCAGCATTCGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAAGAGAACGTGAATGCGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGTCCTGCAGCCGCTCCTaGGCCAGCATCGCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RRRERECVKGGIGHLGGRSCSRS*ASIASC Trigger: GCAGCTGGCGATGCTGGCCAAGGAGCGGCTGCAGGA...CCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | GGGCACTCGAGGATGAGGATGAAGAAGGCTTGGAGGTaGTGCTACTGGCCATCGGAGGGTCCAAGGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GHSRMRMKKAWR*CYWPSEGPRSH Trigger: GTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCAAGCCTTCTTCATCCTCATCCTCGAGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | CGTGAAGGGTGGAATCGGACATCTGGGAGGCAGGGGTaGAGGCCATGTACTGCTGGCACTGTTCACAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: REGWNRTSGRQG*RPCTAGTVHSG Trigger: ACCACTGTGAACAGTGCCAGCAGTACATGGCCTTCACCCCTGCCTCCCAGATGTCCGATTCCACCCTTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | ACCTCGTTGCTGGAGCTGATTCGAGACTGTTGGGTCTaGAGTGTGTATGGGAAGGAGCTCACCTGGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TSLLELIRDCWV*SVYGKELTWST Trigger: GGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | AGGATGAGGATGAAGAAGGCTTGGAGGTGGTGCTACTaGCCATCGGAGGGTCCAAGGAGTCACACTCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RMRMKKAWRWCY*PSEGPRSHTPA Trigger: AGCAGGAGTGTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCAAGCCTTCTTCATCCTCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGTGGTGCTACTGGCCATCGGAGGGTCCAAGGAGTCACACTCCTGCTTCACAGACCTTCCAAGTCTaGATATGTCCGAGGGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: WRWCYWPSEGPRSHTPASQTFQV*ICPRDP Trigger: TGGATCCCTCGGACATATCAAGACTTGGAAGGTCTG...TGAAGCAGGAGTGTGACTCCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | CTCGGGCTCCCACAGGCAGAGCACACCCTAAGTAACTaGATAACTGCCCACTGTAGCATTGACCTGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLPQAEHTLSN*ITAHCSIDLNL Trigger: CAGGTTCAGGTCAATGCTACAGTGGGCAGTTATGCAGTTACTTAGGGTGTGCTCTGCCTGTGGGAGCCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | CCATGCTATGCAGCCGGGGGTACCTCTCCAAGAGGGTaGTCACCATCTTCTCAAAGGTCTCATCGCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCYAAGGTSPRG*SPSSQRSHRIS Trigger: TGAGATGCGATGAGACCTTTGAGAAGATGGTGAGCACCCTCTTGGAGAGGTACCCCCGGCTGCATAGCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | GGAGCTGATTCGAGACTGTTGGGTCTGCAGTGTGTATaGGAAGGAGCTCACCTGGAGCACCAGGAGGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GADSRLLGLQCV*EGAHLEHQEVE Trigger: TTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | GGAGGTGATAAGGTCGTCCATAATGCTGAGCGTTTCTaGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGDKVVHNAERF*CAVVSEGRHSG Trigger: ACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCATTATGGACGACCTTATCACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | TCTCAAAGGTCTCATCGCATCTCAGGAGTGGGCTGGTaGTCCCCCACTGCAGAGACTTGCTGTACTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQRSHRISGVGW*SPTAETCCTHP Trigger: TGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | CAGCGCTACTGTTGCTCTGTGGCCTTTCCAAATCGATaGGCAGCTCCTCAGAATCATTCTCACTGGCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QRYCCSVAFPNR*AAPQNHSHWRG Trigger: TCCCCGCCAGTGAGAATGATTCTGAGGAGCTGCTCATCGATTTGGAAAGGCCACAGAGCAACAGTAGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | TCTTCTCCCAGCATAGAAGAAGAGAACGTGAATGCGTaGAGGGTGGAATCGGACATCTGGGAGGCAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPSIEEENVNA*RVESDIWEAGV Trigger: CACCCCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCTATGCTGGGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | AACCTGGGTCCTGTCAGCAGAACTGAAGGAGGACAGTaGCCCCAAAGACCTTGGTCACATTTGGGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLGPVSRTEGGQ*PQRPWSHLGSS Trigger: AGAACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCTGACAGGACCCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | TCATCGCATCTCAGGAGTGGGCTGGTGATCCCCCACTaGAGAGACTTGCTGTACTCATCCAAGCCAAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: SSHLRSGLVIPH*RDLLYSSKPKY Trigger: GTACTTTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | CACCATCTTCTCAAAGGTCTCATCGCATCTCAGGAGTaGGCTGGTGATCCCCCACTGCAGAGACTTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HHLLKGLIASQE*AGDPPLQRLAV Trigger: TACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGAGAAGATGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGAGGGATCCACTCGTCCTGGTCATTTCCTCTCCAGGTCTTTAGTCGGGTTTGGAGCACCAGGAGGTaGAAAGCTTCGAGAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VRGIHSSWSFPLQVFSRVWSTRR*KASRTS Trigger: AGAAGTTCTCGAAGCTTTCAACCTCCTGGTGCTCCA...AACCCGACTAAAGACCTGGAGAGGAAATGACCAGGACGAGTGGATCCCTCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | TCATTTCCTCTCCAGGTCTTTAGTCGGGTTACAAAGTaGGTTTCAACAGTGAGTTCGGAGGCGGGGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SFPLQVFSRVTK*VSTVSSEAGLP Trigger: GGGGAGCCCCGCCTCCGAACTCACTGTTGAAACTCACTTTGTAACCCGACTAAAGACCTGGAGAGGAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | GACTTCTTCTCCCAGCATAGAAGAAGAGAACGTGAATaGGTGAAGGGTGGAATCGGACATCTGGGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DFFSQHRRRERE*VKGGIGHLGGR Trigger: CCTGCCTCCCAGATGTCCGATTCCACCCTTCACGCATTCACGTTCTCTTCTTCTATGCTGGGAGAAGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | TGTTGGGTCTGCAGTGTGTATGGGAAGGAGCTCACCTaGAGCACCAGGAGGTTGAAAGCTTCGAGAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CWVCSVYGKELT*STRRLKASRTS Trigger: AGAAGTTCTCGAAGCTTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCCATACACACTGCAGACCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | TATCCAGTTGTATCCAGTGGACCTCGTTGCTGGAGCTaGTTCGAGACTGTTGGGTCTGCAGTGTGTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YPVVSSGPRCWS*FETVGSAVCMG Trigger: TCCCATACACACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR GCA 72 bp | GTACTCATCCAAGCCAAAGTACAGCTTCTCGCAGCCTaGGTCCTCCATTGTATCCAGTTGTATCCAGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLIQAKVQLLAA*VLHCIQLYPVD Trigger: GTCCACTGGATACAACTGGATACAATGGAGGACGCAGGCTGCGAGAAGCTGTACTTTGGCTTGGATGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR TCA 72 bp | TATAGTGGCATCTCATATTCTTTGACTACCAGGAGGTaGAGGTGGCTGATGCCCTCCATGGCGTGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YSGISYSLTTRR*RWLMPSMAWKR Trigger: CCTTTTCCACGCCATGGAGGGCATCAGCCACCTTCACCTCCTGGTAGTCAAAGAATATGAGATGCCACTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCGTGCCCCCAAAGACCTaGGTCACATTTGGGGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLVPPKT*VTFGEF Trigger: GAACTCCCCAAATGTGACCAAGGTCTTTGGGGGCAC...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGGGTTTGCCAGCCGTGCTAGAAGAACTCACCCCATTCTCCATGATGGAATTCGAGTTAAATAGCTaGAGTCGATTAATCGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CWGLPAVLEELTPFSMMEFELNS*SRLIAG Trigger: ACCTGCGATTAATCGACTCAAGCTATTTAACTCGAA...TTCCATCATGGAGAATGGGGTGAGTTCTTCTAGCACGGCTGGCAAACCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CCA 72 bp | TGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTaGGAAAGACAAAGGAGTTCAGCTCAGAGAACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CRVHHCMLKDCK*ERQRSSAQRTF Trigger: GAAGGTTCTCTGAGCTGAACTCCTTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | CATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTaGAAGTGGGAAAGACAAAGGAGTTCAGCTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HNCRVHHCMLKD*KWERQRSSAQR Trigger: TCTCTGAGCTGAACTCCTTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | ACACTAGAATCTCAGCGTGATATGTGGGTTTCCAGGTaGTCACTTTTAACCAACACAGTGGTATGGCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLESQRDMWVSR*SLLTNTVVWHN Trigger: GTTATGCCATACCACTGTGTTGGTTAAAAGTGAGCACCTGGAAACCCACATATCACGCTGAGATTCTAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAGACCTTGGTCACATTaGGGGAGTTCTTTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQMPLSNNHKKQLHELQPRPWSH*GSSLEK Trigger: CTTCTCCAAAGAACTCCCCAAATGTGACCAAGGTCT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | TGCTCACTTTTAACCAACACAGTGGTATGGCATAACTaGAGAGTGCATCACTGTATGCTTAAAGACTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSLLTNTVVWHN*RVHHCMLKDCK Trigger: CTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTATGCCATACCACTGTGTTGGTTAAAAGTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | AGACATGAATTAACAAGTCATGGTGGCCTGGGCTTGTaGAATTTCATCCTTAAAGAGGACCTAGCATTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RHELTSHGGLGL*NFILKEDLAFS Trigger: AGAGAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACTTGTTAATTCATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR GCA 72 bp | TTACATTCAATATTAACCTGTGTGAACTGTCACACATaGCAAGGTTCAACAGGTCTGCAGGTAAGTTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LHSILTCVNCHT*QGSTGLQVSYQ Trigger: CTGGTAACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAATATTGAATGTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTATGTGGACTTCACATTaGTTCTCCAGAATACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVMWTSH*FSRIHP Trigger: AGGATGTATTCTGGAGAACAAATGTGAAGTCCACAT...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTTTACTCACTGAGTTGTaGAAGGATGCTAAGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NHKKQLHELQPKLDYSISLLTEL*KDAKPE Trigger: CTCAGGCTTAGCATCCTTCAACAACTCAGTGAGTAA...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCTGGAAAGTACCTCTTaGCTGAAATGCTGCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NHKKQLHELQPKLDYSISLESTS*LKCCCS Trigger: AGAACAGCAGCATTTCAGCAAAGAGGTACTTTCCAG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAAAGAGGCAGGTAAATaGAGCTTTCTCAACTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: TQMPLSNNHKKQLHELQPKEAGK*SFLNYW Trigger: CCAATAGTTGAGAAAGCTCAATTTACCTGCCTCTTT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CCA 72 bp | GACAAAGAGGCAGGTAAATTGAGCTTTCTCAACTATTaGAGTGATGGCCTTTTGGTTTTATTCTGGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: DKEAGKLSFLNY*SDGLLVLFWHF Trigger: GAAATGCCAGAATAAAACCAAAAGGCCATCACTCCAATAGTTGAGAAAGCTCAATTTACCTGCCTCTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAACTCCTGTGGAAATTTaGCCAAAGGTTTCAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: TQMPLSNNHKKQLHELQPTPVEI*PKVSIH Trigger: ATGTATTGAAACCTTTGGCAAAATTTCCACAGGAGT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCTAGCTGTAAAGTTCTaGTTATCCCTGGATAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: NHKKQLHELQPKLDYSISLAVKF*LSLDNQ Trigger: CTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAGTGTTAATGGAATATaGCACAAACAGTGGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQMPLSNNHKKQLHELQPSVNGI*HKQWLS Trigger: AGAAAGCCACTGTTTGTGCAATATTCCATTAACACT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTGGAGTGATGGCCTTTaGGTTTTATTCTGGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQWSDGL*VLFWHF Trigger: GAAATGCCAGAATAAAACCAAAAGGCCATCACTCCA...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR TCA 72 bp | TACAAATATCTTCTACATTCTATCATTTCAGACCCCTaGGTAATACTGTACCAAAGTACAGATCTGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YKYLLHSIISDP*VILYQSTDLKR Trigger: TCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCTGAAATGATAGAATGTAGAAGATATTTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCGACCACAGCGGTGCTGGCAGAGACCCCTTCATCCAGCCGAATGCTGCATAGCAGCAGCCTCCTaGGGGGACACACACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRPQRCWQRPLHPAECCIAAAS*GDTHSS Trigger: TGATGAGTGTGTGTCCCCTCAGGAGGCTGCTGCTAT...GCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCGGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCAAAGGTCTCATCGCATCTCAGGAGTGGGCTGGTGATCCCCCACTGCAGACCGAGGTCCAGGCTCTaGCTGCCGCTGTCTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: FSKVSSHLRSGLVIPHCRPRSRL*LPLSAI Trigger: AATCGCAGACAGCGGCAGCCAGAGCCTGGACCTCGG...TCTGCAGTGGGGGATCACCAGCCCACTCCTGAGATGCGATGAGACCTTTGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTTGGAGGTGGTGCTACTaGCCATCGGAGGGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSWRWCY*PSEGPR Trigger: CCTTGGACCCTCCGATGGCCAGTAGCACCACCTCCA...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTGTGGAATCGGACATCTaGGAGGCAGGGGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSVESDI*EAGVKA Trigger: GGCCTTCACCCCTGCCTCCCAGATGTCCGATTCCAC...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTTTGACTACCAGGAGGTaGAGGTGGCTGATGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSLTTRR*RWLMPS Trigger: GGAGGGCATCAGCCACCTTCACCTCCTGGTAGTCAA...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTAAGGCTTGGAGGTGGTaGTACTGGCCATCGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSKAWRW*YWPSEG Trigger: ACCCTCCGATGGCCAGTAGCACCACCTCCAAGCCTT...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTTGGGGTCTGGCTGGTTaGTGTAGTCAGCGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSWGLAG*CSQRGA Trigger: AGCACCACGCTGACTACAGCAACCAGCCAGACCCCA...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTCGGGGCGAGATGGAGTaGAACTGCATGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSRGEME*NCMSCS Trigger: AGAGCAGCTCATGCAGTTCCACTCCATCTCGCCCCG...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | GTCCGAGGGATCCACTCGTCCTGGTCATTTCCTCTCCAGGTCTTTAGTCGGGTTTCCACTTTGCTAAAGTaGCCGAGGTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRGIHSSWSFPLQVFSRVSTLLK*PRSRLW Trigger: CCAGAGCCTGGACCTCGGCCACTTTAGCAAAGTGGA...AACCCGACTAAAGACCTGGAGAGGAAATGACCAGGACGAGTGGATCCCTCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 72 bp | CAGCTTCTCGCAGCCTGCGTCCTCCATTGTATCCAGTaGTATCCAGTGGACCTCGTTGCTGGAGCTGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLLAACVLHCIQ*YPVDLVAGADS Trigger: CGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGGACGCAGGCTGCGAGAAGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 72 bp | CTCAGGAGTGGGCTGGTGATCCCCCACTGCAGAGACTaGCTGTACTCATCCAAGCCAAAGTACAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRSGLVIPHCRD*LYSSKPKYSFS Trigger: CGAGAAGCTGTACTTTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAGCCCACTCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| 3UTR CAA 72 bp | TACTTGGGGTCGTGTACACTGACGTCGAAAGGCATTTaGCTGAAGGTCTCGATGTCAGGCCAGGGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YLGSCTLTSKGI*LKVSMSGQGSP Trigger: GGGAGAGCCCTGGCCTGACATCGAGACCTTCAGCAAAATGCCTTTCGACGTCAGTGTACACGACCCCAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTCCGAGTACTGCTGGATaGGTAGATAGCAGCGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSPSTAG*VDSSAR Trigger: TCGTGCGCTGCTATCTACTCATCCAGCAGTACTCGG...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCTCTGGGAGGCAGGGGTaGAGGCCATGTACTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFSGRQG*RPCTAG Trigger: GCCAGCAGTACATGGCCTTCACCCCTGCCTCCCAGA...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGAGGTGATAAGGTCGTCCATAATGCTGAGCGTTTCTGGTGTGCTGTGGGACTGTCGAACACGCTaGAGAGTTTGCTGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGEVIRSSIMLSVSGVLWDCRTR*RVCWTR Trigger: TCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTC...CCACAGCACACCAGAAACGCTCAGCATTATGGACGACCTTATCACCTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTTGGGGCAGGTTTTTGTaGGTAGGGAATTGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSWGRFL*VGNWWA Trigger: AGCCCACCAATTCCCTACTCACAAAAACCTGCCCCA...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCGGAGACATAGCAGCATaGCAGGCCCACCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFGDIAA*QAHLLL Trigger: GAGCAGGAGGTGGGCCTGGCATGCTGCTATGTCTCC...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTCCGGTGCCGTTTCTTTaGCGGGCCAGAAATGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSPVPFL*RARNEH Trigger: ATGTTCATTTCTGGCCCGCCAAAGAAACGGCACCGG...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTGACTGTCGAACACGCTaGAGAGTTTGCTGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSDCRTR*RVCWTR Trigger: TCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTC...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCAGTGAGTTTCAACAGTaGGTTCGGAGGCGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFSEFQQ*VRRRGS Trigger: GGAGCCCCGCCTCCGAACTCACTGTTGAAACTCACT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTACAGGAGGAGTCCACTaGAGAACACCCCTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSTGGVH*RTPLHN Trigger: ATTGTGAAGGGGTGTTCTTCAGTGGACTCCTCCTGT...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTGGATACCATCCCCGGTaGCGTTTCTTTGGCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSGYHPR*RFFGGP Trigger: TGGCCCGCCAAAGAAACGGCACCGGGGATGGTATCC...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTCAGCCAGGGGAGCTGTaGCGGCGACATGGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVQPGEL*RRHGCT Trigger: TGTGCACCCATGTCGCCGGCACAGCTCCCCTGGCTG...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTTTGTCTCGCACTTCCTaGAGCCGCTCCTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSLSRTS*SRSLAS Trigger: GCTGGCCAAGGAGCGGCTGCAGGAAGTGCGAGACAA...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTCCAGGGGCAGCCGCATaGTTTCCAGATGTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSPGAAA*FPDVCP Trigger: AGGGCAGACATCTGGAAAGCATGCGGCTGCCCCTGG...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTAAAGAGGACGAACTGTaGGAGCTGGCACAACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSKEDEL*ELAQLE Trigger: CTCTAGTTGTGCCAGCTCCCACAGTTCGTCCTCTTT...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTGCCGAATGCTGCTGGTaGGGGTCAGAAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSAECCW*GSEAAA Trigger: AGCAGCAGCTTCTGACCCCCACCAGCAGCATTCGGC...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTAGCCTGCCGCCCTTCTaGGATCCCAGCAGGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSSLPPF*DPSRLY Trigger: ATACAGCCTGCTGGGATCCCAGAAGGGCGGCAGGCT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTGGAGGTGAAGGTGGCTaGTGCCCTCCATGGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVGGEGG*CPPWRG Trigger: TCCACGCCATGGAGGGCATCAGCCACCTTCACCTCC...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGGTTGAAAGCTTCGAGAACTTCTCTGCAATTAATAACTCGATCAGCCAATCCGGGTCCAGGCTCTGGCTaGCGCTGTCTGCGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLKASRTSLQLITRSANPGPGSG*RCLRLH Trigger: GTGCAATCGCAGACAGCGGCAGCCAGAGCCTGGACC...CGGATTGGCTGATCGAGTTATTAATTGCAGAGAAGTTCTCGAAGCTTTCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR GCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCAAGGAGTCACACTCCTaGTTCAGGATCTCCCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFKESHS*FRISPT Trigger: GGTCGGGGAGATCCTGAAGCAGGAGTGTGACTCCTT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | GAAACCAGGGGCAGCCGCATGCTTTCCAGATGTCTGCCCTGCTTGCTGAAGACAGGCAACTGTGAGCTGTaGTTGATAAATTTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETRGSRMLSRCLPCLLKTGNCEL*LINLEG Trigger: ACCTTCCAAATTTATCAACCACAGCTCACAGTTGCC...TGTCTTCAGCAAGCAGGGCAGACATCTGGAAAGCATGCGGCTGCCCCTGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTCCGAGGTCCAGGCTCTaGCTGCCGCTGTCTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVPRSRL*LPLSAI Trigger: AATCGCAGACAGCGGCAGCCAGAGCCTGGACCTCGG...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCCAAGGACGAGGAGGATaGCAGCCTGCCGCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLQGRGG*QPAALL Trigger: CAGAAGGGCGGCAGGCTGCCATCCTCCTCGTCCTTG...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACCAGGCCACATCAGCATaGGGCAGCAAGGACGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADQATSA*GSKDEE Trigger: CTCCTCGTCCTTGCTGCCCCATGCTGATGTGGCCTG...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 72 bp | TCCTCCATTGTATCCAGTTGTATCCAGTGGACCTCGTaGCTGGAGCTGATTCGAGACTGTTGGGTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSIVSSCIQWTS*LELIRDCWVCS Trigger: ACTGCAGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATACAATGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAACCAGGGCTCTCCCTCTaGCTGGCTCAGTTCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKPGLSL*LAQFAV Trigger: GACAGCGAACTGAGCCAGTCAGAGGGAGAGCCCTGG...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTCTGCTGTTAGCAGTTTaGAACTCATCCCGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSLLLAV*NSSRRR Trigger: CCGCCTCCGGGATGAGTTTCAAACTGCTAACAGCAG...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCTGCATGAGCTGCTCTTaGCTCCATGGCCGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLCMSCS*LHGRWS Trigger: GGACCAGCGGCCATGGAGGCAAGAGCAGCTCATGCA...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAGCCAGGCCCACCTCCTaGTCCAAGGCCGTTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPARPTS*SKAVRV Trigger: AACTCGAACGGCCTTGGAGCAGGAGGTGGGCCTGGC...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAAAGGAGGATGGCAGCCTaGCGCCCTTCTGGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKRRMAA*RPSGIP Trigger: TGGGATCCCAGAAGGGCGGCAGGCTGCCATCCTCCT...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCAGGACAGGCCGAGGCTaGAGAATTCCAGTTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFRTGRG*RIPVNG Trigger: CCCATTAACTGGAATTCTCCAGCCTCGGCCTGTCCT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTTCCACTTTGCTAAAGTaGCCGAGGTCCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSSTLLK*PRSRLW Trigger: CCAGAGCCTGGACCTCGGCCACTTTAGCAAAGTGGA...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTGGGAAGGAGCTCACCTaGAGCACCAGGAGGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSGKELT*STRRLK Trigger: TTTCAACCTCCTGGTGCTCCAGGTGAGCTCCTTCCC...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 72 bp | CCGGGGCTCCTCCACTTTGTATTCCTTTATTACTTCTaGCTTGATGCCAGCCAGCTTCTCACTGTAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLLHFVFLYYF*LDASQLLTVDQ Trigger: CTGGTCTACAGTGAGAAGCTGGCTGGCATCAAGCAAGAAGTAATAAAGGAATACAAAGTGGAGGAGCCCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGTGGTGCTGCCGGGCTaGGGTCCACTGGCGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPVVLPG*GPLAVI Trigger: TATTACCGCCAGTGGACCTCAGCCCGGCAGCACCAC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCAGTGTGGTCTGGAGCTaGCATAGCATATGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPSVVWS*HSIWLP Trigger: AGGTAGCCATATGCTATGTCAGCTCCAGACCACACT...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTACACCCCTTCACAATTaGCGTTGCTGGAGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSTPLHN*RCWSVV Trigger: GACCACACTCCAGCAACGTCAATTGTGAAGGGGTGT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAATTCGGGCGCCTGAGATaGGGTCTGGCTGGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEFGRLR*GLAGCC Trigger: ACAGCAACCAGCCAGACCCCATCTCAGGCGCCCGAA...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTGACGTTGCTGGAGTGTaGTCTGGAGCTGACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSDVAGV*SGADIA Trigger: TGCTATGTCAGCTCCAGACCACACTCCAGCAACGTC...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 72 bp | AGTCAATATCACTATGCAGGGCAGACCTTCCAAGTCTaGATATGTCCGAGGGATCCACTCGTCCTGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SQYHYAGQTFQV*ICPRDPLVLVI Trigger: AATGACCAGGACGAGTGGATCCCTCGGACATATCAAGACTTGGAAGGTCTGCCCTGCATAGTGATATTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | GTATCCAGTTGTATCCAGTGGACCTCGTTGCTGGAGCTGATTCGAGACTGTTGGGTCTTCTGGCAACTGTaGGCTGTGGTTGATAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSCIQWTSLLELIRDCWVFWQL*AVVDKF Trigger: AAATTTATCAACCACAGCTCACAGTTGCCAGAAGAC...CCAACAGTCTCGAATCAGCTCCAGCAACGAGGTCCACTGGATACAACTGGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACCGAAAGGCATTTTGCTaGAGGTCTCGATGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADRKAFC*RSRCQA Trigger: GGCCTGACATCGAGACCTTCAGCAAAATGCCTTTCG...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTGGTCCAGGCTCTGGCTaGCGCTGTCTGCGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISGPGSG*RCLRLH Trigger: GTGCAATCGCAGACAGCGGCAGCCAGAGCCTGGACC...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCACGCACGACCATGCTATaGAGCCGGGGGTACCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSRTTML*SRGYLS Trigger: GGAGAGGTACCCCCGGCTGCATAGCATGGTCGTGCG...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAGGGACTGCTCCTCGCTaGTCATGTCTTTGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPGTAPR*SCLCAG Trigger: GCCTGCACAAAGACATGAGCAGCGAGGAGCAGTCCC...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCAGAAGAGAACGTGAATaGGTGAAGGGTGGAATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPRRERE*VKGGIG Trigger: TCCGATTCCACCCTTCACGCATTCACGTTCTCTTCT...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCTCCCGGAGGCGGAACTaGCACTCATCCTCTAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLSRRRN*HSSSNS Trigger: AGAGTTAGAGGATGAGTGGCAGTTCCGCCTCCGGGA...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAATCGCATCTCAGGAGTaGGCTGGTGATCCCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEIASQE*AGDPPL Trigger: CAGTGGGGGATCACCAGCCCACTCCTGAGATGCGAT...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAAGACCACGCAAGAGCCTaGGCACTCGAGGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKDHARA*ALEDED Trigger: ATCCTCATCCTCGAGTGCCCAGGCTCTTGCGTGGTC...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAGGCTCTCCCTCTGACTaGCTCAGTTCGCTGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEGSPSD*LSSLSS Trigger: CGATGACAGCGAACTGAGCCAGTCAGAGGGAGAGCC...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCATGGAGTGGAACTGCATaGGCTGCTCTTGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPWSGTA*AALASM Trigger: CATGGAGGCAAGAGCAGCTCATGCAGTTCCACTCCA...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAATAGCAGCAGCCTCCTaGGGGGACACACACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPIAAAS*GDTHSS Trigger: TGATGAGTGTGTGTCCCCTCAGGAGGCTGCTGCTAT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACCTCGTTGCTGGAGCTaGTTCGAGACTGTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEPRCWS*FETVGS Trigger: AGACCCAACAGTCTCGAATCAGCTCCAGCAACGAGG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAACTCCATGATGGAACCTaGGGTTCCTGTGACAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKLHDGT*GSCDSA Trigger: AGCGCTGTCACAGGAACCTCAGGTTCCATCATGGAG...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTTGGGGTCGTGTACACTaGCGTCGAAAGGCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVWGRVH*RRKAFC Trigger: GCAAAATGCCTTTCGACGTCAGTGTACACGACCCCA...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTATGAAATCATGCACATaGCATCTTGAGAACGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSMKSCT*HLENGA Trigger: GGCCCCGTTCTCAAGATGTCATGTGCATGATTTCAT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCTTATATGAGGCATGTTaGAGGAACTTCTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPLYEAC*RNFSRR Trigger: CCTCCTGGAGAAGTTCCTTCAACATGCCTCATATAA...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGCTGGTCCCATTTGCTaGCTCTGTCACCGTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPAGPIC*LCHREA Trigger: GGCTTCACGGTGACAGAGGCAGCAAATGGGACCAGC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCTCAGCGTCTCTGAAATaGCTTCTGCTAGAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFSASLK*LLLESS Trigger: AGAACTCTCTAGCAGAAGGCATTTCAGAGACGCTGA...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCCAGTCAATATCACTATaGAGGGCAGACCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFQSISL*RADLPS Trigger: ACTTGGAAGGTCTGCCCTGCATAGTGATATTGACTG...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGCCTCTCAGCCTCCTTTaGACTGAGGTCCAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQPLSLL*TEVQGS Trigger: GCTGCCCTGGACCTCAGTGCAAAGGAGGCTGAGAGG...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACGTGGCTTCAATATGCTaGAAGACGCTCTTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADVASIC*KTLFRD Trigger: GTCCCTGAAGAGCGTCTTGCAGCATATTGAAGCCAC...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAGAGCTGGGAGAAGATTaGCCGTGGCACTGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPELGED*PWHCST Trigger: AGTACTGCAGTGCCACGGCCAATCTTCTCCCAGCTC...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAGTTTCTGGTGTGCTGTaGTCTCGGAGGGACGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPVSGVL*SRRDAI Trigger: TATGGCGTCCCTCCGAGACCACAGCACACCAGAAAC...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTGCTACTGTTGCTCTGTaGCCTTTCCAAATCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSATVAL*PFQIDE Trigger: CTCATCGATTTGGAAAGGCCACAGAGCAACAGTAGC...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCACGACCACAGCGGTGCTaGCAGAGACCCCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSRPQRC*QRPLHP Trigger: TGGATGAAGGGGTCTCTGCCAGCACCGCTGTGGTCG...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAAGAAGGCTTGGAGGTaGTGCTACTGGCCATCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPKKAWR*CYWPSE Trigger: CTCCGATGGCCAGTAGCACCACCTCCAAGCCTTCTT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAGGAGCCCATGTTCATaGCGACCACTGGAAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPRSPCS*RPLEGV Trigger: CACTCCTTCCAGTGGTCGCCATGAACATGGGCTCCT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 72 bp | TGTGTCAGTGCAGCACAGCAGTTACTCACTGAGTTGTaGAAGGATGCTAAGCCTGAGCTGATGAAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVSAAQQLLTEL*KDAKPELMKPD Trigger: ATCTGGTTTCATCAGCTCAGGCTTAGCATCCTTCAACAACTCAGTGAGTAACTGCTGTGCTGCACTGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| 3UTR CAA 72 bp | ATAGACATGGTTTCTCGTTGCCGGGGCTCCTCCACTTaGTATTCCTTTATTACTTCTTGCTTGATGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IDMVSRCRGSST*YSFITSCLMPA Trigger: GGCTGGCATCAAGCAAGAAGTAATAAAGGAATACAAAGTGGAGGAGCCCCGGCAACGAGAAACCATGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACCTTCCACCTTTGGTTTaGCATCTGCAGTGGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADLPPLV*HLQWRK Trigger: CTTTCTCCACTGCAGATGTCAAACCAAAGGTGGAAG...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAGAGATGGAGTGGAACTaGATGAGCTGCTCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEEMEWN*MSCSCL Trigger: GAGGCAAGAGCAGCTCATGCAGTTCCACTCCATCTC...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCCCCACTGCAGAGACTTaGTGTACTCATCCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLPTAET*CTHPSQ Trigger: TTGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGG...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTACCTCTCCAAGAGGGTaGTCACCATCTTCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVTSPRG*SPSSQR Trigger: CCTTTGAGAAGATGGTGAGCACCCTCTTGGAGAGGT...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTGGTGTGGCTTCAATATaGTGCAAGACGCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVGVASI*CKTLFR Trigger: CCTGAAGAGCGTCTTGCAGCATATTGAAGCCACACC...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAAGAAAGGATGCTGGTCTaGGTCCAAGTAGAGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKERMLV*VQVELG Trigger: TCCCAGCTCTACTTGGACCCAGACCAGCATCCTTTC...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCCAGCAGGAACCCGGCTaGGATGTCAATTTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLQQEPG*DVNLFH Trigger: ATGGAACAAATTGACATCCCAGCCGGGTTCCTGCTG...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCAGTGCATTTTTCCCATaGTCATCTGGTAGAAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFSAFFP*SSGRNR Trigger: GCGATTTCTACCAGATGACCATGGGAAAAATGCACT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTATAGGCTTAGTGGAGTaGCAAAGAGCAGAGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSIGLVE*QRAEDC Trigger: ACAATCCTCTGCTCTTTGCCACTCCACTAAGCCTAT...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCACTGCTCTTGCCTCCATaGCCGCTGGTCCCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSLLLPP*PLVPFA Trigger: AGCAAATGGGACCAGCGGCCATGGAGGCAAGAGCAG...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAAAATGCTGAGCGTTTCTaGTGTGCTGTGGTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKNAERF*CAVVSE Trigger: CTCCGAGACCACAGCACACCAGAAACGCTCAGCATT...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCACTGAAGGGGCAGGATaGGGACTACGTTCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLTEGAG*GLRSLK Trigger: TTTCAGAGAACGTAGTCCCCATCCTGCCCCTTCAGT...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCGGACTCTTGAAGTTATaGATGGCTTTAGGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPGLLKL*MALGKS Trigger: ACTCTTCCCTAAAGCCATCCATAACTTCAAGAGTCC...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTTTGTTCCATGCACAGTaGCACCAAACGCAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVLFHAQ*HQTQIL Trigger: AAGGATCTGCGTTTGGTGTCACTGTGCATGGAACAA...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGATTGGCCGTGGCACTaGAGTACTACATCTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPDWPWH*STTSER Trigger: TCGCTCAGATGTAGTACTGCAGTGCCACGGCCAATC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGAATCACAGTTTCCCCTaGAAGGACAGGCCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQNHSFP*KDRPRL Trigger: CAGCCTCGGCCTGTCCTTGCAGGGGAAACTGTGATT...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCACGAGACTGTTGGGTCTaGAGTGTGTATGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPRDCWV*SVYGKE Trigger: CTCCTTCCCATACACACTGCAGACCCAACAGTCTCG...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGTGAAGGCCATGTACTaGTGGCACTGTTCACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPVKAMY*WHCSQW Trigger: CCACTGTGAACAGTGCCAGCAGTACATGGCCTTCAC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCACTTCAAACTTGCTTTaGATCTCATTGTCCAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHGGLGLCNFILKEDLAFTSNLL*ISLSSR Trigger: TCGACTGGACAATGAGATCCAAAGCAAGTTTGAAGT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCGCCCTGGGAGGTCCTaGCTAGGTAGTACTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISRPGRS*LGSTLS Trigger: ACTTAAAGTACTACCTAGTCAGGACCTCCCAGGGCG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTCACCCCATTCTCCATaGTGGAACCTGAGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQSPHSP*WNLRFL Trigger: CAGGAACCTCAGGTTCCATCATGGAGAATGGGGTGA...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCTCCAGCTCTAGGTTGTaGTATGACAGCTCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLSSSRL*YDSSLM Trigger: CATTAAGGAGCTGTCATATCACAACCTAGAGCTGGA...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCATCCATCACAACGATaGAAGGCCAGACACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISHPSQR*KARHTA Trigger: GGCAGTGTGTCTGGCCTTTCATCGTTGTGATGGATG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAAGGGGACTACGTTCTCTaGAACCATGAGCTTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKGDYVL*NHELWF Trigger: AAACCAAAGCTCATGGTTTCAGAGAACGTAGTCCCC...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGACCCCTGAGTAATACTGTACCAAAGTACAGATCTGAAGAGAAACTGAGGGTTAAGCGGACAATTGTTTaGCGTAAGGAGCTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSNTVPKYRSEEKLRVKRTIV*RKELLS Trigger: AGACAGAAGCTCCTTACGTCAAACAATTGTCCGCTT...AACCCTCAGTTTCTCTTCAGATCTGTACTTTGGTACAGTATTACTCAGGGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAATACTTTAAGTGCTTCTaGTTCTTCGGCTGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEYFKCF*FFGWVV Trigger: CACCACCCAGCCGAAGAAGCAGAAGCACTTAAAGTA...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGCTGGTGATCCCCCACTaGAGAGACTTGCTGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQLVIPH*RDLLYS Trigger: TGAGTACAGCAAGTCTCTGCAGTGGGGGATCACCAG...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACTCCTTTATTACTTCTTaGTTGATGCCAGCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADSFITS*LMPASF Trigger: GAAGCTGGCTGGCATCAAGCAAGAAGTAATAAAGGA...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACTTACTGGAAATTCCTaGTTCTGTAGGCTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEELTGNS*FCRLAG Trigger: ACCAGCCAGCCTACAGAAGCAGGAATTTCCAGTAAG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCTGTTCCATTTCTGTATaGCCAGGATTGCGTAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLCSISV*PGLRSG Trigger: TCCACTACGCAATCCTGGGCATACAGAAATGGAACA...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACTCTGTGAAGTCAGCTTaGTGTTCCATTTCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADSVKSA*CSISVC Trigger: GCATACAGAAATGGAACAGCAAGCTGACTTCACAGA...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTAGGATGAAGAAGGCTTaGAGGTGGTGCTACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISRMKKA*RWCYWP Trigger: TGGCCAGTAGCACCACCTCCAAGCCTTCTTCATCCT...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGCTGCAGTACTACATCTaGGCGAGGCTTCTATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQLQYYI*ARLLWS Trigger: ACTCCATAGAAGCCTCGCTCAGATGTAGTACTGCAG...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAAGACCTTCCAAGTCTTaGTATGTCCGAGGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSRPSKS*YVRGIH Trigger: GTGGATCCCTCGGACATATCAAGACTTGGAAGGTCT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAGCATCTCATATTCTTTaGCTACCAGGAGGTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPASHIL*LPGGEG Trigger: ACCTTCACCTCCTGGTAGTCAAAGAATATGAGATGC...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AGTTTTACAGTAACAGTAACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGCTTTGCCCTCCAACCTaGACGTGCTTCTTCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFTVTVTQMPLSNNHKKQLCPPT*TCFFMR Trigger: TCTCATGAAGAAGCACGTTCAGGTTGGAGGGCAAAG...CTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGTTACTGTTACTGTAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTAAAACCCATCTGTCGTaGAAGATCCTTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISKTHLS*KILLGQ Trigger: CTGCCCCAGAAGGATCTTGCACGACAGATGGGTTTT...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGAAATAGGGTAAAGTaGCATAGCCTATCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IPHQWCISCNTFRLVNADRNRVK*HSLSGS Trigger: TGATCCTGATAGGCTATGGCACTTTACCCTATTTCT...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | ATAACTGCAGAGTGCATCACTGTATGCTTAAAGACTGCAAGTGGGAAAGACAAACTCACAGAAAACTCCTaGATAGCAGTCAGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ITAECITVCLKTASGKDKLTENS*IAVSMI Trigger: GATCATGCTGACTGCTATGCAGGAGTTTTCTGTGAG...TTTGTCTTTCCCACTTGCAGTCTTTAAGCATACAGTGATGCACTCTGCAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCCTGTATGCCCAGGATTaGGTAGTGGATAATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLLYAQD*VVDNFW Trigger: CCAAAAATTATCCACTACGCAATCCTGGGCATACAG...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCATCCACACTCAGGAGATaGGTGCTAGTTAACCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPSTLRR*VLVNPN Trigger: ATTAGGGTTAACTAGCACCCATCTCCTGAGTGTGGA...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCAAATTGGTGGGCTGTTTaGGTCAGACATTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQMPLSNNHKKQLHELQPNWWAV*VRHFFF Trigger: GAAGAAGAAATGTCTGACTCAAACAGCCCACCAATT...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAATTCTTTCCAGCAGATaGGAGGTCCCTTTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEILSSR*EVPLIT Trigger: TGTTATCAAAGGGACCTCTCATCTGCTGGAAAGAAT...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAAGTGTTTCATTTCACTaGGAAGCCTCAGCGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSSVSFH*EASASL Trigger: CAGAGACGCTGAGGCTTCTCAGTGAAATGAAACACT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAACATGGGAGTTGTCATaGACCAGCACAAACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSTWELS*TSTNSV Trigger: CACACTGTTTGTGCTGGTTCATGACAACTCCCATGT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAAGTCGGGTTACAAAGTaGGTTTCAACAGTGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPSRVTK*VSTVSS Trigger: CGAACTCACTGTTGAAACTCACTTTGTAACCCGACT...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAATGTCAATTTGTTCCATaGACAGTGACACCAAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSWYYLHWFCSAKEECQFVP*TVTPNA Trigger: TGCGTTTGGTGTCACTGTGCATGGAACAAATTGACA...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCTCCAAGAGGGTCCTTaGCAGTCAATATCACTATGC | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISLQEGP*QSISLC Trigger: GCATAGTGATATTGACTGGCAAGGACCCTCTTGGAG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCATTCTGCTTCTTCGGCTaGGTGGTGAGCTTCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSFCFFG*VVSFKL Trigger: TAACTTGAAGCTCACCACCCAGCCGAAGAAGCAGAA...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTTTATTACTTCTTGCTTaGTGCCAGCCAGCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISLLLLA*CQPASH Trigger: GTGAGAAGCTGGCTGGCATCAAGCAAGAAGTAATAA...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR GCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTTGTCACCGTGAAGCCTaGTTTGTATCCATTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISCHREA*FVSISC Trigger: ACAGCTAATGGATACAAAGCAGGCTTCACGGTGACA...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAGGCAACTGTGAGCTGTaGTTGATAAATTTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPGNCEL*LINLEG Trigger: ACCTTCCAAATTTATCAACCACAGCTCACAGTTGCC...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTTTCATTGCTACATTGTaGGAAAAATCCACGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISFIATL*EKSTLP Trigger: TGGCAGCGTGGATTTTTCTCACAATGTAGCAATGAA...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTGTCTTCTGGCAACTGTaGGCTGTGGTTGATAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISVFWQL*AVVDKF Trigger: AAATTTATCAACCACAGCTCACAGTTGCCAGAAGAC...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAAGGGAAGAGTTTATATaGGGCATGTTGAAGGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLPANFNESTSMSLKDSSREEFI*GMLKEL Trigger: AAGTTCCTTCAACATGCCTCATATAAACTCTTCCCT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR TCA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCACAGAAATACCTGTTaGAGTCATACTGTACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHKKQLHELQPKLDYSISHRNTC*SHTVHS Trigger: AGAATGTACAGTATGACTTCAACAGGTATTTCTGTG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | CCGGGGCGAGATGGAGTGGAACTGCATGAGCTGCTCTTGCCTCCATaGCCGCTGGTCCCATTTGCTGCCTCTGTCACCGTGAAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRDGVELHELLLPP*PLVPFAASVTVKPA Trigger: AGCAGGCTTCACGGTGACAGAGGCAGCAAATGGGACCAGCGGCCATGGAGGCAAGAGCAGCTCATGCAGTTCCACTCCATCTCGCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGCAGAGACCCCTTCATCCAGCCGAATGCTGCTGGTGGGGGTCAGAAGCTGTGCCGCTGTCTGCGATaGCACACACCTGGGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGRDPFIQPNAAGGGQKLCRCLR*HTPGIR Trigger: TCTTATCCCAGGTGTGTGCAATCGCAGACAGCGGCA...CAGCTTCTGACCCCCACCAGCAGCATTCGGCTGGATGAAGGGGTCTCTGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCGGCCCCGGGGCTGCCTaGACCACGCAAGAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPGPGAA*TTQEPG Trigger: CCCAGGCTCTTGCGTGGTCAAGGCAGCCCCGGGGCC...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS GCA 90 bp | CACGGAGCGCCCAAAGGCAGGGCTCGCTCTCTCACAGAAAACTCCTaGATAGCAGTCAGCATGATCTGCTCAAACTCTTCCCGGAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HGAPKGRARSLTENS*IAVSMICSNSSRRG Trigger: TCCTCTCCGGGAAGAGTTTGAGCAGATCATGCTGACTGCTATGCAGGAGTTTTCTGTGAGAGAGCGAGCCCTGCCTTTGGGCGCTCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | CTTGAAAGAGGACGAACTGTGGGAGCTGGCACAACTAGAGCCGACTaGGAGACAGGTGACCCAGGATACCATCCCCGGTGCCGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LERGRTVGAGTTRAD*ETGDPGYHPRCRFF Trigger: AAAGAAACGGCACCGGGGATGGTATCCTGGGTCACCTGTCTCCCAGTCGGCTCTAGTTGTGCCAGCTCCCACAGTTCGTCCTCTTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGTGAGAGCCATCAAGGCCATGATGAAGTCCACTTaGCTAAAGTGGCCGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVLWSRRDAIVVRAIKAMMKST*LKWPRS Trigger: GGACCTCGGCCACTTTAGCAAAGTGGACTTCATCAT...GGCCTTGATGGCTCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CAA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCTCCTGCAGCCGCTCCTaGGCCAGCATCGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHGGLGLCNFILKEDLAFSCSRS*ASIASC Trigger: GCAGCTGGCGATGCTGGCCAAGGAGCGGCTGCAGGA...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS GCA 90 bp | ACTAGAGCCGACTGGGAGACAGGTGACCCAGGATACCATCCCCGGTaGCGTTTCTTTGGCGGGCCAGAAATGAACATGTTAGCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRADWETGDPGYHPR*RFFGGPEMNMLAWS Trigger: AGACCAAGCTAACATGTTCATTTCTGGCCCGCCAAAGAAACGGCACCGGGGATGGTATCCTGGGTCACCTGTCTCCCAGTCGGCTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 90 bp | TGGCCCCCACCAGCAGGAACCCGGCTGGGATGTCAATTTGTTCCATaGACAGTGACACCAAACGCAGATCCTTTCCAGCTTGACAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WPPPAGTRLGCQFVP*TVTPNADPFQLDKT Trigger: GGTTTTGTCAAGCTGGAAAGGATCTGCGTTTGGTGTCACTGTGCATGGAACAAATTGACATCCCAGCCGGGTTCCTGCTGGTGGGGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 90 bp | CCCAGGTCTACAAGGACACCTGACTGTCGAACACGCTGGAGAGTTTaGTGGACCAGAACCTCTGACCTTGGGACGATGATGATGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSTRTPDCRTRWRV*WTRTSDLGTMMMKS Trigger: GGACTTCATCATCATCGTCCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTCAGGTGTCCTTGTAGACCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 90 bp | AGGATGCTGGTCTGGGTCCAAGTAGAGCTGGGAGAAGATTGGCCGTaGCACTGCAGTACTACATCTGAGCGAGGCTTCTATGGAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RMLVWVQVELGEDWP*HCSTTSERGFYGVV Trigger: CACAACTCCATAGAAGCCTCGCTCAGATGTAGTACTGCAGTGCCACGGCCAATCTTCTCCCAGCTCTACTTGGACCCAGACCAGCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCGGGAGGTTAGGAGACTaGGCCCCCACCAGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPGRLGD*APTSRN Trigger: GTTCCTGCTGGTGGGGGCCAAGTCTCCTAACCTCCC...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTTGCCGCTGTCTGCGATaGCACACACCTGGGATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSCRCLR*HTPGIR Trigger: TCTTATCCCAGGTGTGTGCAATCGCAGACAGCGGCA...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | TTCCACCTTTGGTTTGACATCTGCAGTGGAGAAAGGATGCTGGTCTaGGTCCAAGTAGAGCTGGGAGAAGATTGGCCGTGGCACTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHLWFDICSGERMLV*VQVELGEDWPWHCS Trigger: ACTGCAGTGCCACGGCCAATCTTCTCCCAGCTCTACTTGGACCCAGACCAGCATCCTTTCTCCACTGCAGATGTCAAACCAAAGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 90 bp | ATGATGATGAAGTCCACTTTGCTAAAGTGGCCGAGGTCCAGGCTCTaGCTGCCGCTGTCTGCGATTGCACACACCTGGGATAAGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MMMKSTLLKWPRSRL*LPLSAIAHTWDKSL Trigger: AAGACTCTTATCCCAGGTGTGTGCAATCGCAGACAGCGGCAGCCAGAGCCTGGACCTCGGCCACTTTAGCAAAGTGGACTTCATCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTGTGACAGCGCTACTGTaGCTCTGTGGCCTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSVTALL*LCGLSK Trigger: TTTGGAAAGGCCACAGAGCAACAGTAGCGCTGTCAC...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | AGGTCTACAAGGACACCTGACTGTCGAACACGCTGGAGAGTTTGCTaGACCAGAACCTCTGACCTTGGGACGATGATGATGAAGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RSTRTPDCRTRWRVC*TRTSDLGTMMMKST Trigger: AGTGGACTTCATCATCATCGTCCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTCAGGTGTCCTTGTAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTGAGCGTTTCTGGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGTGAGAATCTACATCCAGGTTTaGTGTGGGAATCATAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLSVSGVLWSRRDAIVVRIYIQV*CGNHSS Trigger: GCTGCTATGATTCCCACACAAAACCTGGATGTAGAT...TCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS TCA 90 bp | CACCAGCAGGAACCCGGCTGGGATGTCAATTTGTTCCATGCACAGTaGCACCAAACGCAGATCCTTTCCAGCTTGACAAAACCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HQQEPGWDVNLFHAQ*HQTQILSSLTKPIC Trigger: ACAGATGGGTTTTGTCAAGCTGGAAAGGATCTGCGTTTGGTGTCACTGTGCATGGAACAAATTGACATCCCAGCCGGGTTCCTGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 90 bp | AGAGAGCCTGAAATCACACTCGTTAGCTCCACATGGGAGTTGTCATaGACCAGCACAAACAGTGTGTATGGGTTCTGCTTCACCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: REPEITLVSSTWELS*TSTNSVYGFCFTLL Trigger: GAGGAGGGTGAAGCAGAACCCATACACACTGTTTGTGCTGGTTCATGACAACTCCCATGTGGAGCTAACGAGTGTGATTTCAGGCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGAGCTGGGAGAAGATaGGCCGTGGCACTGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: IPHQWCISCNTFRLVNADRAGRR*AVALQY Trigger: GTACTGCAGTGCCACGGCCAATCTTCTCCCAGCTCT...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AGCAGAACTGAAGGAGGACAGTGCCCCCAAAGACCTTGGTCACATTTGGGGAGTGCAAAGAGCAGAGGATaGTCGGCTTCTACATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRTEGGQCPQRPWSHLGSAKSRG*SASTFF Trigger: AAAGAATGTAGAAGCCGACAATCCTCTGCTCTTTGC...ACTCCCCAAATGTGACCAAGGTCTTTGGGGGCACTGTCCTCCTTCAGTTCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCACTGCTGTTAGCAGTTaGAAACTCATCCCGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SHGGLGLCNFILKEDLAFTAVSS*KLIPEA Trigger: CGCCTCCGGGATGAGTTTCAAACTGCTAACAGCAGT...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 90 bp | TTGCCACGACGTAATCTGGCAGCCTCTGGTAGTGTTTCATTTCACTaGGAAGCCTCAGCGTCTCTGAAATGCCTTCTGCTAGAGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPRRNLAASGSVSFH*EASASLKCLLLESS Trigger: AGAACTCTCTAGCAGAAGGCATTTCAGAGACGCTGAGGCTTCTCAGTGAAATGAAACACTACCAGAGGCTGCCAGATTACGTCGTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | TCTGGTGCCACAGCTGATGACACTGAAGAAATAGGCTTAGTGGAGTaGCAAAGAGCAGAGGATTGTCGGCTTCTACATTCTTTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGATADDTEEIGLVE*QRAEDCRLLHSFQQ Trigger: CTGCTGGAAAGAATGTAGAAGCCGACAATCCTCTGCTCTTTGCCACTCCACTAAGCCTATTTCTTCAGTGTCATCAGCTGTGGCACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTGAGCGTTTCTGGTGTGCTGTGGTCTCGGAGGGACGCCATAGTGGTGAGACTGTGGTTGATAAATTaGGAAGGTTTCGTTATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: MLSVSGVLWSRRDAIVVRLWLIN*EGFVIY Trigger: GTAGATAACGAAACCTTCCAAATTTATCAACCACAG...TCTCACCACTATGGCGTCCCTCCGAGACCACAGCACACCAGAAACGCTCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CAA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTCATGCACATGACATCTaGAGAACGGGGCCTTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSHAHDI*RTGPLG Trigger: GCCTAAAGGCCCCGTTCTCAAGATGTCATGTGCATG...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 90 bp | TTATCTACATCCAGGTTTTGTGTGGGAATCATAGCAGCAGCCTCCTaGGGGGACACACACTCATCAAGGTCACCATTGAAAGGAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSTSRFCVGIIAAAS*GDTHSSRSPLKGVT Trigger: AGTCACTCCTTTCAATGGTGACCTTGATGAGTGTGTGTCCCCTCAGGAGGCTGCTGCTATGATTCCCACACAAAACCTGGATGTAGATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS TCA 90 bp | CACAGGACTCTTGAAGTTATGGATGGCTTTAGGGAAGAGTTTATATaGGGCATGTTGAAGGAACTTCTCCAGGAGGAACTGTGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HRTLEVMDGFREEFI*GMLKELLQEELCRG Trigger: GCCCCTGCACAGTTCCTCCTGGAGAAGTTCCTTCAACATGCCTCATATAAACTCTTCCCTAAAGCCATCCATAACTTCAAGAGTCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | GCTTCGAGAACTTCTCTGCAATTAATAACTCGATCAGCCAATCCGTaGGTTGGCTCACCATGTGACAGAGAGCCTGAAATCACACTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRTSLQLITRSANP*VGSPCDREPEITLV Trigger: AACGAGTGTGATTTCAGGCTCTCTGTCACATGGTGAGCCAACCCACGGATTGGCTGATCGAGTTATTAATTGCAGAGAAGTTCTCGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCTCTGGTAGAAATCGCTaGTCCACAGCACAAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPSGRNR*STAQTR Trigger: CCTAGTTTGTGCTGTGGACAAGCGATTTCTACCAGA...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGGTTTGCCAGCCGTGCTAGAAGAACTCACCCCATTCTCCATGATGGAAAACTGTGAGCTGTGGTaGATAAATTTGGAAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWGLPAVLEELTPFSMMENCELW*INLEGF Trigger: GAAACCTTCCAAATTTATCAACCACAGCTCACAGTT...TTCCATCATGGAGAATGGGGTGAGTTCTTCTAGCACGGCTGGCAAACCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172680.3 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAGAGGATGAAGAAGGCTaGGAGGTGGTGCTACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEEDEEG*EVVLLA Trigger: GGCCAGTAGCACCACCTCCAAGCCTTCTTCATCCTC...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCGCCAGCACAGGACTCTaGAAGTTATGGATGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPASTGL*KLWMAL Trigger: TAAAGCCATCCATAACTTCAAGAGTCCTGTGCTGGC...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AGTCATGGTGGCCTGGGCTTGTGCAATTTCATCCTTAAAGAGGACCTAGCATTCGAGGCTTCTATGGAGTaGTGTAGAGCTTCCTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SHGGLGLCNFILKEDLAFEASME*CRASSN Trigger: ATTTGAGGAAGCTCTACACAACTCCATAGAAGCCTC...GAATGCTAGGTCCTCTTTAAGGATGAAATTGCACAAGCCCAGGCCACCATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACTGGAGCACCAGGAGGTaGAAAGCTTCGAGAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPHQWCISCNTFRLVNADWSTRR*KASRTS Trigger: AGAAGTTCTCGAAGCTTTCAACCTCCTGGTGCTCCA...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACCCCACTGCAGAGACTaGCTGTACTCATCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEPHCRD*LYSSKP Trigger: TGGCTTGGATGAGTACAGCAAGTCTCTGCAGTGGGG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 90 bp | GCTGTTCCATTTCTGTATGCCCAGGATTGCGTAGTGGATAATTTTTaGTGTGGCTTCAATATGCTGCAAGACGCTCTTCAGGGACACATT | + |
|
Preference number: 5 (lower is better) Translates to: AVPFLYAQDCVVDNF*CGFNMLQDALQGHI Trigger: AATGTGTCCCTGAAGAGCGTCTTGCAGCATATTGAAGCCACACCAAAAATTATCCACTACGCAATCCTGGGCATACAGAAATGGAACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACAGTCCCCTTGCTTTGGATCTCATaGTCCAGTCGAACAACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TSGVSHVTHSGWLMLTVPLLWIS*SSRTTY Trigger: ATACGTTGTTCGACTGGACAATGAGATCCAAAGCAA...GGGGACTGTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCAACACCCCTTCACAATaGACGTTGCTGGAGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLNTPSQ*TLLECG Trigger: ACCACACTCCAGCAACGTCAATTGTGAAGGGGTGTT...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 90 bp | TGTCTGCGATTGCACACACCTGGGATAAGAGTCTTCTGGCAACTGTaGGCTGTGGTTGATAAATTTGGAAGGTTTCGTTATCTACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRLHTPGIRVFWQL*AVVDKFGRFRYLHP Trigger: TGGATGTAGATAACGAAACCTTCCAAATTTATCAACCACAGCTCACAGTTGCCAGAAGACTCTTATCCCAGGTGTGTGCAATCGCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS TCA 90 bp | GAACCAGCACAAACAGTGTGTATGGGTTCTGCTTCACCCTCCTCATaGAAACTTCAAACTTGCTTTGGATCTCATTGTCCAGTCGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: EPAQTVCMGSASPSS*KLQTCFGSHCPVEQ Trigger: TTGTTCGACTGGACAATGAGATCCAAAGCAAGTTTGAAGTTTTCATGAGGAGGGTGAAGCAGAACCCATACACACTGTTTGTGCTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCACAGACCTTCCAAGTCTaGATATGTCCGAGGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQMPLSNNHKKQLHELQPQTFQV*ICPRDP Trigger: TGGATCCCTCGGACATATCAAGACTTGGAAGGTCTG...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ATTCCACACCAGTGGTGTATCTCATGTAACACATTCAGGCTGGTTAATGCTGACACTCTAAGCGGACAATaGTTTGACGTAAGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPHQWCISCNTFRLVNADTLSGQ*FDVRSF Trigger: GAAGCTCCTTACGTCAAACAATTGTCCGCTTAGAGT...GTCAGCATTAACCAGCCTGAATGTGTTACATGAGATACACCACTGGTGTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCATCTACATCCAGGTTTaGTGTGGGAATCATAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLIYIQV*CGNHSS Trigger: GCTGCTATGATTCCCACACAAAACCTGGATGTAGAT...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | TTAACCTGTGTGAACTGTCACACATGCCAAGGTTCAACAGGTCTGCAGGTAAGTTTCGAGTTAAATAGCTaGAGTCGATTAATCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTCVNCHTCQGSTGLQVSFELNS*SRLIAG Trigger: ACCTGCGATTAATCGACTCAAGCTATTTAACTCGAA...ACTTACCTGCAGACCTGTTGAACCTTGGCATGTGTGACAGTTCACACAGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAAATGATGAAGTCCCTTaGCCCTCCAACCTGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPNDEVP*PSNLNV Trigger: CACGTTCAGGTTGGAGGGCAAAGGGACTTCATCATT...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGTAAAGTTCTTGTTATCCCTGGATAACCAGATCCATCACCTAACACTCGAATTGGTGGGCTGTTaGAGTCAGACATTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAVKFLLSLDNQIHHLTLELVGC*SQTFLL Trigger: AAGAAGAAATGTCTGACTCAAACAGCCCACCAATTC...GAGTGTTAGGTGATGGATCTGGTTATCCAGGGATAACAAGAACTTTACAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAATGATGAAGTCCACTTaGCTAAAGTGGCCGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPANFNESTSMSLKDSSMMKST*LKWPRS Trigger: GGACCTCGGCCACTTTAGCAAAGTGGACTTCATCAT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACGGGGCTCCTCCACTTaGTATTCCTTTATTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEERGSST*YSFITS Trigger: AGAAGTAATAAAGGAATACAAAGTGGAGGAGCCCCG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCATGTAGGCTGGCTGGTTaGCTCCTGAACACTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLPANFNESTSMSLKDSSCRLAG*LLNTVN Trigger: ATTCACAGTGTTCAGGAGCAAACCAGCCAGCCTACA...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAACTCTGTGAAGTCAGCTaGCTGTTCCATTTCTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEELCEVS*LFHFCM Trigger: CATACAGAAATGGAACAGCAAGCTGACTTCACAGAG...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCATCTCCAAGAGGGTCCTaGCCAGTCAATATCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: TLPANFNESTSMSLKDSSSPRGS*PVNITM Trigger: CATAGTGATATTGACTGGCAAGGACCCTCTTGGAGA...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCAACGTCGAAAGGCATTTaGCTGAAGGTCTCGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLPANFNESTSMSLKDSSTSKGI*LKVSMS Trigger: TGACATCGAGACCTTCAGCAAAATGCCTTTCGACGT...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACAGATGCCCCTTTCTAACAATCATAAGAAGCAGTTGCATGAATTACAGCCATTTATTACTTCTTGCTaGATGCCAGCCAGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQMPLSNNHKKQLHELQPFITSC*MPASFS Trigger: TGAGAAGCTGGCTGGCATCAAGCAAGAAGTAATAAA...TGGCTGTAATTCATGCAACTGCTTCTTATGATTGTTAGAAAGGGGCATCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAATTCCTTTATTACTTCTaGCTTGATGCCAGCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEEFLYYF*LDASQL Trigger: AAGCTGGCTGGCATCAAGCAAGAAGTAATAAAGGAA...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | ACACTACCTGCTAACTTTAATGAGTCCACATCAATGAGTCTAAAAGACTCTTCATCTTCCACCTTTGGTTaGACATCTGCAGTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLPANFNESTSMSLKDSSSSTFG*TSAVEK Trigger: TTTCTCCACTGCAGATGTCAAACCAAAGGTGGAAGA...TGAAGAGTCTTTTAGACTCATTGATGTGGACTCATTAAAGTTAGCAGGTAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AAACAGTGGCTTTCTTGGTATTACCTGCATTGGTTCTGTTCAGCAAAGGAAGAAAACTGTGAGCTGTGGTaGATAAATTTGGAAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQWLSWYYLHWFCSAKEENCELW*INLEGF Trigger: GAAACCTTCCAAATTTATCAACCACAGCTCACAGTT...TTCTTCCTTTGCTGAACAGAACCAATGCAGGTAATACCAAGAAAGCCACTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCTACTGTTGGTATTAGTCATACACTACCTGCTAACTTTAATGAGTCCAAGAAACTTGAATTTCTaGAGAAGATCAGCACCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLLVLVIHYLLTLMSPRNLNF*RRSAPT Trigger: TGTAGGTGCTGATCTTCTCAAGAAATTCAAGTTTCT...TGGACTCATTAAAGTTAGCAGGTAGTGTATGACTAATACCAACAGTAGGAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS-3UTR CAA 90 bp | AATCATAAGAAGCAGTTGCATGAATTACAGCCAAAACTCGACTACAGCATTTCTCTGTGGTTGATAAATTaGGAAGGTTTCGTTATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NHKKQLHELQPKLDYSISLWLIN*EGFVIY Trigger: GTAGATAACGAAACCTTCCAAATTTATCAACCACAG...AGAAATGCTGTAGTCGAGTTTTGGCTGTAATTCATGCAACTGCTTCTTATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 72 bp | GGACGAACTGTGGGAGCTGGCACAACTAGAGCCGACTaGGAGACAGGTGACCCAGGATACCATCCCCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTVGAGTTRAD*ETGDPGYHPRC Trigger: GCACCGGGGATGGTATCCTGGGTCACCTGTCTCCCAGTCGGCTCTAGTTGTGCCAGCTCCCACAGTTCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | CCGGGGCGAGATGGAGTGGAACTGCATGAGCTGCTCTaGCCTCCATGGCCGCTGGTCCCATTTGCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGRDGVELHELL*PPWPLVPFAAS Trigger: AGAGGCAGCAAATGGGACCAGCGGCCATGGAGGCAAGAGCAGCTCATGCAGTTCCACTCCATCTCGCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | AGAGTAGTTCCCGGGGCGAGATGGAGTGGAACTGCATaGGCTGCTCTTGCCTCCATGGCCGCTGGTCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RVVPGARWSGTA*AALASMAAGPI Trigger: AATGGGACCAGCGGCCATGGAGGCAAGAGCAGCTCATGCAGTTCCACTCCATCTCGCCCCGGGAACTACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | TTGGTGACAAAGAGTAGTTCCCGGGGCGAGATGGAGTaGAACTGCATGAGCTGCTCTTGCCTCCATGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVTKSSSRGEME*NCMSCSCLHGR Trigger: GCGGCCATGGAGGCAAGAGCAGCTCATGCAGTTCCACTCCATCTCGCCCCGGGAACTACTCTTTGTCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | AAGTCCACTTTGCTAAAGTGGCCGAGGTCCAGGCTCTaGCTGCCGCTGTCTGCGATTGCACACACCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KSTLLKWPRSRL*LPLSAIAHTWD Trigger: ATCCCAGGTGTGTGCAATCGCAGACAGCGGCAGCCAGAGCCTGGACCTCGGCCACTTTAGCAAAGTGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS CAA 72 bp | GCACAAACTAGGATGTGTTCAGGGAGGTTAGGAGACTaGGCCCCCACCAGCAGGAACCCGGCTGGGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AQTRMCSGRLGD*APTSRNPAGMS Trigger: TGACATCCCAGCCGGGTTCCTGCTGGTGGGGGCCAAGTCTCCTAACCTCCCTGAACACATCCTAGTTTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 72 bp | GCTGCTCTTGCCTCCATGGCCGCTGGTCCCATTTGCTaGCTCTGTCACCGTGAAGCCTGCTTTGTATCCATT | + |
|
Preference number: 6 (lower is better) Translates to: AALASMAAGPIC*LCHREACFVSI Trigger: AATGGATACAAAGCAGGCTTCACGGTGACAGAGGCAGCAAATGGGACCAGCGGCCATGGAGGCAAGAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | ATGCTGGTCTGGGTCCAAGTAGAGCTGGGAGAAGATTaGCCGTGGCACTGCAGTACTACATCTGAGCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MLVWVQVELGED*PWHCSTTSERG Trigger: GCCTCGCTCAGATGTAGTACTGCAGTGCCACGGCCAATCTTCTCCCAGCTCTACTTGGACCCAGACCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | AGGCTCTGGCTGCCGCTGTCTGCGATTGCACACACCTaGGATAAGAGTCTTCTGGCAACTGTGAGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLWLPLSAIAHT*DKSLLATVSCG Trigger: ACCACAGCTCACAGTTGCCAGAAGACTCTTATCCCAGGTGTGTGCAATCGCAGACAGCGGCAGCCAGAGCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS CCA 72 bp | CCCAGGTCTACAAGGACACCTGACTGTCGAACACGCTaGAGAGTTTGCTGGACCAGAACCTCTGACCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSTRTPDCRTR*RVCWTRTSDLG Trigger: CCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTCAGGTGTCCTTGTAGACCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | ACCTCTGACCTTGGGACGATGATGATGAAGTCCACTTaGCTAAAGTGGCCGAGGTCCAGGCTCTGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSDLGTMMMKST*LKWPRSRLWLP Trigger: CGGCAGCCAGAGCCTGGACCTCGGCCACTTTAGCAAAGTGGACTTCATCATCATCGTCCCAAGGTCAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS CAA 90 bp | TTGTCCACAGCACAAACTAGGATGTGTTCAGGGAGGTTAGGAGACTaGGCCCCCACCAGCAGGAACCCGGCTGGGATGTCAATTTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTAQTRMCSGRLGD*APTSRNPAGMSICS Trigger: GGAACAAATTGACATCCCAGCCGGGTTCCTGCTGGTGGGGGCCAAGTCTCCTAACCTCCCTGAACACATCCTAGTTTGTGCTGTGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 72 bp | ACAAGGACACCTGACTGTCGAACACGCTGGAGAGTTTaGTGGACCAGAACCTCTGACCTTGGGACGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TRTPDCRTRWRV*WTRTSDLGTMM Trigger: CATCATCGTCCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTCAGGTGTCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | AGGACACCTGACTGTCGAACACGCTGGAGAGTTTGCTaGACCAGAACCTCTGACCTTGGGACGATGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: RTPDCRTRWRVC*TRTSDLGTMMM Trigger: CATCATCATCGTCCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGACAGTCAGGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | GGGAGAAGATTGGCCGTGGCACTGCAGTACTACATCTaGGCGAGGCTTCTATGGAGTTGTGTAGAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRRLAVALQYYI*ARLLWSCVELP Trigger: AGGAAGCTCTACACAACTCCATAGAAGCCTCGCTCAGATGTAGTACTGCAGTGCCACGGCCAATCTTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 72 bp | CCAGCAGGAACCCGGCTGGGATGTCAATTTGTTCCATaGACAGTGACACCAAACGCAGATCCTTTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PAGTRLGCQFVP*TVTPNADPFQL Trigger: AAGCTGGAAAGGATCTGCGTTTGGTGTCACTGTGCATGGAACAAATTGACATCCCAGCCGGGTTCCTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS GCA 72 bp | CCCAAAGGCAGGGCTCGCTCTCTCACAGAAAACTCCTaGATAGCAGTCAGCATGATCTGCTCAAACTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PKGRARSLTENS*IAVSMICSNSS Trigger: GGAAGAGTTTGAGCAGATCATGCTGACTGCTATGCAGGAGTTTTCTGTGAGAGAGCGAGCCCTGCCTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 72 bp | ATAAAAGGGGCTCAGTTCTTGAAAGAGGACGAACTGTaGGAGCTGGCACAACTAGAGCCGACTGGGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: IKGAQFLKEDEL*ELAQLEPTGRQ Trigger: CTGTCTCCCAGTCGGCTCTAGTTGTGCCAGCTCCCACAGTTCGTCCTCTTTCAAGAACTGAGCCCCTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 90 bp | GGCCGTGGCACTGCAGTACTACATCTGAGCGAGGCTTCTATGGAGTaGTGTAGAGCTTCCTCAAATCTAGCAGATTTCAGTTGCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRGTAVLHLSEASME*CRASSNLADFSCPA Trigger: TGCTGGGCAACTGAAATCTGCTAGATTTGAGGAAGCTCTACACAACTCCATAGAAGCCTCGCTCAGATGTAGTACTGCAGTGCCACGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | TCGAACACGCTGGAGAGTTTGCTGGACCAGAACCTCTaGCCTTGGGACGATGATGATGAAGTCCACTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SNTLESLLDQNL*PWDDDDEVHFA Trigger: AGCAAAGTGGACTTCATCATCATCGTCCCAAGGTCAGAGGTTCTGGTCCAGCAAACTCTCCAGCGTGTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS GCA 72 bp | GCTGGTCCCATTTGCTGCCTCTGTCACCGTGAAGCCTaGTTTGTATCCATTAGCTGTTCCATTTTCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPICCLCHREA*FVSISCSIFWC Trigger: GCACCAGAAAATGGAACAGCTAATGGATACAAAGCAGGCTTCACGGTGACAGAGGCAGCAAATGGGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | TCCAGGTTTTGTGTGGGAATCATAGCAGCAGCCTCCTaGGGGGACACACACTCATCAAGGTCACCATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRFCVGIIAAAS*GDTHSSRSPLK Trigger: TTTCAATGGTGACCTTGATGAGTGTGTGTCCCCTCAGGAGGCTGCTGCTATGATTCCCACACAAAACCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS GCA 72 bp | CTCACAGAAAACTCCTGCATAGCAGTCAGCATGATCTaGTCAAACTCTTCCCGGAGAGGAATCTGGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTENSCIAVSMI*SNSSRRGIWSG Trigger: TCCTGACCAGATTCCTCTCCGGGAAGAGTTTGAGCAGATCATGCTGACTGCTATGCAGGAGTTTTCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS GCA 72 bp | GACGCTCTTCAGGGACACATTCTTACTGGAAATTCCTaGTTCTGTAGGCTGGCTGGTTTGCTCCTGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: DALQGHILTGNS*FCRLAGLLLNT Trigger: AGTGTTCAGGAGCAAACCAGCCAGCCTACAGAAGCAGGAATTTCCAGTAAGAATGTGTCCCTGAAGAGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS GCA 72 bp | TTGAGAACGGGGCCTTTAGGCTCTGTGAAGTCAGCTTaGTGTTCCATTTCTGTATGCCCAGGATTGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRTGPLGSVKSA*CSISVCPGLRS Trigger: ACTACGCAATCCTGGGCATACAGAAATGGAACAGCAAGCTGACTTCACAGAGCCTAAAGGCCCCGTTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 72 bp | GAACCCGGCTGGGATGTCAATTTGTTCCATGCACAGTaGCACCAAACGCAGATCCTTTCCAGCTTGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPGWDVNLFHAQ*HQTQILSSLTK Trigger: TTTTGTCAAGCTGGAAAGGATCTGCGTTTGGTGTCACTGTGCATGGAACAAATTGACATCCCAGCCGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | CGTAATCTGGCAGCCTCTGGTAGTGTTTCATTTCACTaGGAAGCCTCAGCGTCTCTGAAATGCCTTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RNLAASGSVSFH*EASASLKCLLL Trigger: TAGCAGAAGGCATTTCAGAGACGCTGAGGCTTCTCAGTGAAATGAAACACTACCAGAGGCTGCCAGATTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 72 bp | GACGTACTGAAGGGGCAGGATGGGGACTACGTTCTCTaGAACCATGAGCTTTGGTTTAATGATGAAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DVLKGQDGDYVL*NHELWFNDEVP Trigger: AGGGACTTCATCATTAAACCAAAGCTCATGGTTTCAGAGAACGTAGTCCCCATCCTGCCCCTTCAGTACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 72 bp | GAAATCACACTCGTTAGCTCCACATGGGAGTTGTCATaGACCAGCACAAACAGTGTGTATGGGTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EITLVSSTWELS*TSTNSVYGFCF Trigger: GAAGCAGAACCCATACACACTGTTTGTGCTGGTTCATGACAACTCCCATGTGGAGCTAACGAGTGTGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | CGTTTCTTTGGCGGGCCAGAAATGAACATGTTAGCTTaGTCTACGGATGTGAAGGTAGGTCTTGGTGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: RFFGGPEMNMLA*STDVKVGLGDK Trigger: TTTGTCACCAAGACCTACCTTCACATCCGTAGACCAAGCTAACATGTTCATTTCTGGCCCGCCAAAGAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | AGCATGATCTGCTCAAACTCTTCCCGGAGAGGAATCTaGTCAGGACCTAATCGTACAAGGTACTGTATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SMICSNSSRRGI*SGPNRTRYCIV Trigger: GACTATACAGTACCTTGTACGATTAGGTCCTGACCAGATTCCTCTCCGGGAAGAGTTTGAGCAGATCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 72 bp | ACTTCTCTGCAATTAATAACTCGATCAGCCAATCCGTaGGTTGGCTCACCATGTGACAGAGAGCCTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TSLQLITRSANP*VGSPCDREPEI Trigger: GATTTCAGGCTCTCTGTCACATGGTGAGCCAACCCACGGATTGGCTGATCGAGTTATTAATTGCAGAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | AGTGCATTTTTCCCATGGTCATCTGGTAGAAATCGCTaGTCCACAGCACAAACTAGGATGTGTTCAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAFFPWSSGRNR*STAQTRMCSGR Trigger: CCTCCCTGAACACATCCTAGTTTGTGCTGTGGACAAGCGATTTCTACCAGATGACCATGGGAAAAATGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | AGAAATAGGCTTAGTGGAGTGGCAAAGAGCAGAGGATaGTCGGCTTCTACATTCTTTCCAGCAGATGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RNRLSGVAKSRG*SASTFFPADER Trigger: CCTCTCATCTGCTGGAAAGAATGTAGAAGCCGACAATCCTCTGCTCTTTGCCACTCCACTAAGCCTATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | AGCAGCTTGTCCAGGTCATCCCCTAATGATGTTGTTTaGAAATGTGATGCCAGGAAGCTGACCTTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSRSSPNDVV*KCDARKLTFPV Trigger: CACAGGAAAGGTCAGCTTCCTGGCATCACATTTCAAAACAACATCATTAGGGGATGACCTGGACAAGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS CAA 90 bp | AACCCTAAAAGTGCATTTTTCCCATGGTCATCTGGTAGAAATCGCTaGTCCACAGCACAAACTAGGATGTGTTCAGGGAGGTTAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NPKSAFFPWSSGRNR*STAQTRMCSGRLGD Trigger: GTCTCCTAACCTCCCTGAACACATCCTAGTTTGTGCTGTGGACAAGCGATTTCTACCAGATGACCATGGGAAAAATGCACTTTTAGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | ACAGCTGATGACACTGAAGAAATAGGCTTAGTGGAGTaGCAAAGAGCAGAGGATTGTCGGCTTCTACATTCT | + |
|
Preference number: 6 (lower is better) Translates to: TADDTEEIGLVE*QRAEDCRLLHS Trigger: AGAATGTAGAAGCCGACAATCCTCTGCTCTTTGCCACTCCACTAAGCCTATTTCTTCAGTGTCATCAGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | TGTACTAGGTCTTTATCTAGATCTTCCACCTTTGGTTaGACATCTGCAGTGGAGAAAGGATGCTGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTRSLSRSSTFG*TSAVEKGCWSG Trigger: CCCAGACCAGCATCCTTTCTCCACTGCAGATGTCAAACCAAAGGTGGAAGATCTAGATAAAGACCTAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CCA 72 bp | TTTCTGTATGCCCAGGATTGCGTAGTGGATAATTTTTaGTGTGGCTTCAATATGCTGCAAGACGCTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLYAQDCVVDNF*CGFNMLQDALQ Trigger: CTGAAGAGCGTCTTGCAGCATATTGAAGCCACACCAAAAATTATCCACTACGCAATCCTGGGCATACAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CAA 72 bp | ACTGCAGTACTACATCTGAGCGAGGCTTCTATGGAGTaGTGTAGAGCTTCCTCAAATCTAGCAGATTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TAVLHLSEASME*CRASSNLADFS Trigger: ACTGAAATCTGCTAGATTTGAGGAAGCTCTACACAACTCCATAGAAGCCTCGCTCAGATGTAGTACTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS TCA 72 bp | TTGCACACACCTGGGATAAGAGTCTTCTGGCAACTGTaGGCTGTGGTTGATAAATTTGGAAGGTTTCGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LHTPGIRVFWQL*AVVDKFGRFRY Trigger: ATAACGAAACCTTCCAAATTTATCAACCACAGCTCACAGTTGCCAGAAGACTCTTATCCCAGGTGTGTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS TCA 72 bp | GTTAGGTCTATATTGAGGAGAATGAAATCATGCACATaGCATCTTGAGAACGGGGCCTTTAGGCTCTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VRSILRRMKSCT*HLENGAFRLCE Trigger: TTCACAGAGCCTAAAGGCCCCGTTCTCAAGATGTCATGTGCATGATTTCATTCTCCTCAATATAGACCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS TCA 72 bp | CTTGAAGTTATGGATGGCTTTAGGGAAGAGTTTATATaGGGCATGTTGAAGGAACTTCTCCAGGAGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LEVMDGFREEFI*GMLKELLQEEL Trigger: CAGTTCCTCCTGGAGAAGTTCCTTCAACATGCCTCATATAAACTCTTCCCTAAAGCCATCCATAACTTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS GCA 72 bp | AGTCAGCTTGCTGTTCCATTTCTGTATGCCCAGGATTaGGTAGTGGATAATTTTTGGTGTGGCTTCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: SQLAVPFLYAQD*VVDNFWCGFNM Trigger: CATATTGAAGCCACACCAAAAATTATCCACTACGCAATCCTGGGCATACAGAAATGGAACAGCAAGCTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||
| CDS CCA 72 bp | ATAGTCAGAAGGATCATGTTCTCCACACTCAGGAGATaGGTGCTAGTTAACCCTAATTGTTCCAGATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IVRRIMFSTLRR*VLVNPNCSRSL Trigger: CAAAGATCTGGAACAATTAGGGTTAACTAGCACCCATCTCCTGAGTGTGGAGAACATGATCCTTCTGACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 |
||
| CDS CAA 72 bp | GAGTCTTCTGGCAACTGTGAGCTGTGGTTGATAAATTaGGAAGGTTTCGTTATCTACATCCAGGTTTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ESSGNCELWLIN*EGFVIYIQVLC Trigger: ACACAAAACCTGGATGTAGATAACGAAACCTTCCAAATTTATCAACCACAGCTCACAGTTGCCAGAAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048977.16 ENSMUST00000172532.8 ENSMUST00000172680.3 |
||
| CDS TCA 72 bp | TCACAGAAATACCTGTTGAAGTCATACTGTACATTCTaGGTTAGGTCTATATTGAGGAGAATGAAATCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SQKYLLKSYCTF*VRSILRRMKSC Trigger: GCATGATTTCATTCTCCTCAATATAGACCTAACTCAGAATGTACAGTATGACTTCAACAGGTATTTCTGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048977.16 |
||