Pregenerated sensors for GRB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019312Ensembl transcript IDs: ENSMUST00000019456.5, ENSMUST00000132771.8
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACCTCAGGAGCTCTACCAAGGGGACAGGACCACAATGCCTCCCTTaGGGACAGGAGTCAGGGATGGACAGGTTTAGGGGATGTTTCACT | + |
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Preference number: 1 (lower is better) Translates to: YLRSSTKGTGPQCLP*GQESGMDRFRGCFT Trigger: AGTGAAACATCCCCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTAGAGCTCCTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| 3UTR CCA 90 bp | AAACAGAGCAGATCAACTGGCCTCTCAGTCTGTACAGATTACGGGTaGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCC | + |
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Preference number: 1 (lower is better) Translates to: KQSRSTGLSVCTDYG*GMRPPGLPRSSHNA Trigger: GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGACTGAGAGGCCAGTTGATCTGCTCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| 3UTR-3UTR GCA 90 bp | TACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGAACCACCCCACCCACCTaGACCGAGTCCACAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: YQGDRTTMPPLGTGVRDGTTPPT*TESTEQ Trigger: CTGTTCTGTGGACTCGGTGCAGGTGGGTGGGGTGGT...TCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| 3UTR CCA 72 bp | AGCTCTACCAAGGGGACAGGACCACAATGCCTCCCTTaGGGACAGGAGTCAGGGATGGACAGGTTTAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SSTKGTGPQCLP*GQESGMDRFRG Trigger: TCCCCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| 3UTR CCA 72 bp | AGATCAACTGGCCTCTCAGTCTGTACAGATTACGGGTaGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RSTGLSVCTDYG*GMRPPGLPRSS Trigger: AGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGACTGAGAGGCCAGTTGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| 3UTR CCA 72 bp | GACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATaGACAGGTTTAGGGGATGTTTCACTGGTTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: DHNASLGDRSQG*TGLGDVSLVER Trigger: TCTCTCAACCAGTGAAACATCCCCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCAGTCTGTACAGATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGACACGGGCACAGCAGTaGCGCAGCAGGCAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLSLYRLRVGYETSWAAPTRAQQ*RSRQGR Trigger: CCTGCCCTGCCTGCTGCGCCACTGCTGTGCCCGTGT...CGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGACTGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCCCTGGGCCTCCTCCATaGCGGCACTCAGAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNAPGPPP*RHSELP Trigger: GGGAAGCTCTGAGTGCCGCCATGGAGGAGGCCCAGG...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | ACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACAGGTTTAGGAGCTGTGGCGCCCGCTaGCACCTCCACAGACCGGCA | + |
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Preference number: 4 (lower is better) Translates to: TGPQCLPWGQESGMDRFRSCGAR*HLHRPA Trigger: TGCCGGTCTGTGGAGGTGGCAGCGGGCGCCACAGCT...CCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCTCCTGCTGCTGGGGATaGGCAAAGGCTGCGACCGCT | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNASCCWG*AKAATA Trigger: AGCGGTCGCAGCCTTTGCCCATCCCCAGCAGCAGGA...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | TACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGAACACGTGACGAGCTGTaGCGCCCGCTGCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YQGDRTTMPPLGTGVRDGTRDEL*RPLPPP Trigger: TGGAGGTGGCAGCGGGCGCCACAGCTCGTCACGTGT...TCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | AGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACAGGTCCCTGTGGGTTCCTCTaGCTCTCCCGGACCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RGQDHNASLGDRSQGWTGPCGFL*LSRTRN Trigger: GTTCCTGGTCCGGGAGAGCCAGAGGAACCCACAGGG...ACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR TCA 90 bp | ACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACGCTGCAGCAGGTCTGTaGAACGGGTCTGGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TKGTGPQCLPWGQESGMDAAAGL*NGSGPH Trigger: ATGAGGGCCAGACCCGTTTCACAGACCTGCTGCAGC...GTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTACAGATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCCTGATCCCCGCAGCTaGAGGAAGCCCTGGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: VCTDYGWGMRPPGLPRSSPDPRS*RKPWIS Trigger: TGAGATCCAGGGCTTCCTGCAGCTGCGGGGATCAGG...AGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCTCTTCCACTGTTTACCACCCCACCCACCTGCACCGAGTCCACAGAGCTGCAGGAAGCCCTaGATCTCAGGGAAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GEELFHCLPPHPPAPSPQSCRKP*ISGKLP Trigger: TGGCAGCTTCCCTGAGATCCAGGGCTTCCTGCAGCT...CTGTGGACTCGGTGCAGGTGGGTGGGGTGGTAAACAGTGGAAGAGCTCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCCAGGACAAAGCCCTGTaGGTTCCTCTGGCTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNAQDKAL*VPLALP Trigger: CGGGAGAGCCAGAGGAACCCACAGGGCTTTGTCCTG...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR TCA 90 bp | ACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACAGGTTTAGGAGCATCTCACACACGTaGCGAGCTGTGGCGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: TGPQCLPWGQESGMDRFRSISHT*RAVAPA Trigger: AGCGGGCGCCACAGCTCGTCACGTGTGTGAGATGCT...CCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCAGTCTGTACAGATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGATGACACGCCCCGCATaGCCAGAGAAGTCCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: PLSLYRLRVGYETSWAAPMTRPA*PEKSIA Trigger: GGCTATGGACTTCTCTGGCCATGCGGGGCGTGTCAT...CGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGACTGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCAGGGGTAGCAGGAGTTaGGCACACATCTTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNARGSRS*AHIFWG Trigger: TCCCCAGAAGATGTGTGCCCAACTCCTGCTACCCCT...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCAGTCTGTACAGATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCGAGACCATCTTTTCTaGGAACAGGGTGTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PLSLYRLRVGYETSWAAPRDHLF*EQGVWG Trigger: CCCCCACACACCCTGTTCCCAGAAAAGATGGTCTCG...CGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGACTGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | ACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACGGCAGGCTCAGACGGTaGTTTGTCTTCTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TKGTGPQCLPWGQESGMDGRLRR*FVFFLQ Trigger: CTGGAGGAAGAAGACAAACCACCGTCTGAGCCTGCC...GTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | CCCCTCACTGGAACAGTACCTCAGGAGCTCTACCAAGGGGACAGGACCACAATGTCGAGCCAGAGCATGTaGTGGGCAGGCTCAGACGGT | + |
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Preference number: 4 (lower is better) Translates to: PLTGTVPQELYQGDRTTMSSQSM*WAGSDG Trigger: ACCGTCTGAGCCTGCCCACCACATGCTCTGGCTCGA...CATTGTGGTCCTGTCCCCTTGGTAGAGCTCCTGAGGTACTGTTCCAGTGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCTCTTCCACTGTTTACCACCCCACCCACCTGCACCGAGTCCACAGTCTGTGAAACGGGTCTaGCCCTCATCCATGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GEELFHCLPPHPPAPSPQSVKRV*PSSMLK Trigger: CTTCAGCATGGATGAGGGCCAGACCCGTTTCACAGA...CTGTGGACTCGGTGCAGGTGGGTGGGGTGGTAAACAGTGGAAGAGCTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGCCCCGCTCCTCTCATAATGCCCCTCACTGGAACAGTACCTCAGGAGCTCCTCGGTTCAGCTGGTaGAATTCTACCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLPRSSHNAPHWNSTSGAPRFSW*NSTSCS Trigger: GCTGCAGCTGGTAGAATTCCACCAGCTGAACCGAGG...AGCTCCTGAGGTACTGTTCCAGTGAGGGGCATTATGAGAGGAGCGGGGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGCCCCGCTCCTCTCATAATGCCCCTCACTGGAACAGTACCTCAGGAGCTAAGAATGGGTTTCTGTaGAGGTGGGCTGCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLPRSSHNAPHWNSTSGAKNGFL*RWAAEL Trigger: GAGCTCTGCAGCCCACCTTCACAGAAACCCATTCTT...AGCTCCTGAGGTACTGTTCCAGTGAGGGGCATTATGAGAGGAGCGGGGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCGGAAGGCAGAGAGGTTaGCTGAAACTCCTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNAGRQRG*LKLLFS Trigger: CGAGAAGAGGAGTTTCAGGCAACCTCTCTGCCTTCC...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | ACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACAGGTTTAGGTCTGTGAAGGTGGGCTaGAGAGCTCAGGGAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TGPQCLPWGQESGMDRFRSVKVG*RAQGRG Trigger: ACCCCTTCCCTGAGCTCTGCAGCCCACCTTCACAGA...CCTAAACCTGTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCACAGGCCAGGCCTCCTaGACTTCCACCACAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNATGQAS*TSTTNS Trigger: TGAATTTGTGGTGGAAGTGCAGGAGGCCTGGCCTGT...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | GGGGAGGAGCTCTTCCACTGTTTACCACCCCACCCACCTGCACCGAGTCCACAGGGATATGCCTGTTTGTaGATCCAGACAGCTCGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GEELFHCLPPHPPAPSPQGYACL*IQTARD Trigger: GTCTCGAGCTGTCTGGATGCACAAACAGGCATATCC...CTGTGGACTCGGTGCAGGTGGGTGGGGTGGTAAACAGTGGAAGAGCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | GTCTGTACAGATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTGGATCTCAGGGAAGCTaGCAGCGTTCAGGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCTDYGWGMRPPGLPRSSGSQGS*QRSGSS Trigger: AGAACTTCCTGAACGCTGGCAGCTTCCCTGAGATCC...AGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATCTGTACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | ACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGACATGTGGAGCCCCTTGTaGCCGTTTCGAAGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TKGTGPQCLPWGQESGMDMWSPL*PFRSLL Trigger: CAACAAGCTTCGAAACGGCCACAAGGGGCTCCACAT...GTCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR TCA 90 bp | GGGGAGGAGCTCTTCCACTGTTTACCACCCCACCCACCTGCACCGAGTCCACAGTCAGGAAGTTCTGGATaGGGTCTTCATGGGATATGC | + |
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Preference number: 4 (lower is better) Translates to: GEELFHCLPPHPPAPSPQSGSSG*GLHGIC Trigger: GCATATCCCATGAAGACCTCATCCAGAACTTCCTGA...CTGTGGACTCGGTGCAGGTGGGTGGGGTGGTAAACAGTGGAAGAGCTCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR TCA 90 bp | TACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGAGAAGCTTGTTGGGCTTaGCACAGAAGCCGAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: YQGDRTTMPPLGTGVRDGEACWA*HRSRSQ Trigger: CTGACTTCGGCTTCTGTGTCAAGCCCAACAAGCTTC...TCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | CCCTCACTGGAACAGTACCTCAGGAGCTCTACCAAGGGGACAGGACCACAATGCCAGCAGGTCCGACTCTaGTCATCCTCACTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSLEQYLRSSTKGTGPQCQQVRL*SSSLQK Trigger: CTTCTGCAGTGAGGATGAGCAGAGTCGGACCTGCTG...GCATTGTGGTCCTGTCCCCTTGGTAGAGCTCCTGAGGTACTGTTCCAGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | TACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGAAGGAACCACCAAGAATaGGTTTCTGTGAAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YQGDRTTMPPLGTGVRDGRNHQE*VSVKVG Trigger: GCCCACCTTCACAGAAACCCATTCTTGGTGGTTCCT...TCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | TGCCCCGCTCCTCTCATAATGCCCCTCACTGGAACAGTACCTCAGGAGCTCTACAGAAGCCGAAGTCAGTaGGCATCCCATACAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CPAPLIMPLTGTVPQELYRSRSQ*ASHTAC Trigger: GCAAGCTGTATGGGATGCCCACTGACTTCGGCTTCT...GTAGAGCTCCTGAGGTACTGTTCCAGTGAGGGGCATTATGAGAGGAGCGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | TGCCCCGCTCCTCTCATAATGCCCCTCACTGGAACAGTACCTCAGGAGCTCTACTCACTGCAGAAGATGTaGAGCCCCTTGTGGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: CPAPLIMPLTGTVPQELYSLQKM*SPLWPF Trigger: AAACGGCCACAAGGGGCTCCACATCTTCTGCAGTGA...GTAGAGCTCCTGAGGTACTGTTCCAGTGAGGGGCATTATGAGAGGAGCGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR GCA 90 bp | TACCAAGGGGACAGGACCACAATGCCTCCCTTGGGGACAGGAGTCAGGGATGGAGGTCTTCATGGGATATaGCTGTTTGTGCATCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YQGDRTTMPPLGTGVRDGGLHGI*LFVHPD Trigger: GTCTGGATGCACAAACAGGCATATCCCATGAAGACC...TCCATCCCTGACTCCTGTCCCCAAGGGAGGCATTGTGGTCCTGTCCCCTTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCTCTTCCACTGTTTACCACCCCACCCACCTGCACCGAGTCCACAGTCACCACATAGACATTaGACTCATTCACATCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GEELFHCLPPHPPAPSPQSPHRH*THSHLP Trigger: TGGCAGATGTGAATGAGTCCAATGTCTATGTGGTGA...CTGTGGACTCGGTGCAGGTGGGTGGGGTGGTAAACAGTGGAAGAGCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCTTGACTTTCTGCAGATaGCACAAGGACAGGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: DYGWGMRPPGLPRSSHNALTFCR*HKDRTK Trigger: CTTTGTCCTGTCCTTGTGCCATCTGCAGAAAGTCAA...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CCA 90 bp | CCCCTCACTGGAACAGTACCTCAGGAGCTCTACCAAGGGGACAGGACCACAATGGCGTTCAGGAAGTTCTaGATGAGGTCTTCATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PLTGTVPQELYQGDRTTMAFRKF*MRSSWD Trigger: ATCCCATGAAGACCTCATCCAGAACTTCCTGAACGC...CATTGTGGTCCTGTCCCCTTGGTAGAGCTCCTGAGGTACTGTTCCAGTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 90 bp | GGGCGTGAGCTCGCTGTACCAGCATCTCACACACGTGACGAGCTGTaGCGCCCGCTGCCACCTCCACAGACCGGCAGGCCCCATCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: GRELAVPASHTRDEL*RPLPPPQTGRPHPH Trigger: GTGAGGATGGGGCCTGCCGGTCTGTGGAGGTGGCAGCGGGCGCCACAGCTCGTCACGTGTGTGAGATGCTGGTACAGCGAGCTCACGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 90 bp | TCGCTGTACCAGCATCTCACACACGTGACGAGCTGTGGCGCCCGCTaGCACCTCCACAGACCGGCAGGCCCCATCCTCACTGTACACCTT | + |
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Preference number: 5 (lower is better) Translates to: SLYQHLTHVTSCGAR*HLHRPAGPILTVHL Trigger: AAGGTGTACAGTGAGGATGGGGCCTGCCGGTCTGTGGAGGTGGCAGCGGGCGCCACAGCTCGTCACGTGTGTGAGATGCTGGTACAGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 90 bp | CGTTTCCAAAGCTTTCGACCTGACCCCCGGCCTGATCCCCGCAGCTaGAGGAAGCCCTGGATCTCAGGGAAGCTGCCAGCGTTCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RFQSFRPDPRPDPRS*RKPWISGKLPAFRK Trigger: CTTCCTGAACGCTGGCAGCTTCCCTGAGATCCAGGGCTTCCTGCAGCTGCGGGGATCAGGCCGGGGGTCAGGTCGAAAGCTTTGGAAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 90 bp | TTTCGACCTGACCCCCGGCCTGATCCCCGCAGCTGCAGGAAGCCCTaGATCTCAGGGAAGCTGCCAGCGTTCAGGAAGTTCTGGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: FRPDPRPDPRSCRKP*ISGKLPAFRKFWMR Trigger: CCTCATCCAGAACTTCCTGAACGCTGGCAGCTTCCCTGAGATCCAGGGCTTCCTGCAGCTGCGGGGATCAGGCCGGGGGTCAGGTCGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CAA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCAGCTGTACCCCGTACTaGAAGAGCCGGAAGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: DYGWGMRPPGLPRSSHNASCTPY*KSRKAA Trigger: GGCTGCCTTCCGGCTCTTCAAGTACGGGGTACAGCT...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 90 bp | CCGTACTTGAAGAGCCGGAAGGCAGCCAGCCAGCAGGTCCGACTCTaGTCATCCTCACTGCAGAAGATGTGGAGCCCCTTGTGGCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: PYLKSRKAASQQVRL*SSSLQKMWSPLWPF Trigger: AAACGGCCACAAGGGGCTCCACATCTTCTGCAGTGAGGATGAGCAGAGTCGGACCTGCTGGCTGGCTGCCTTCCGGCTCTTCAAGTACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 90 bp | AGTCTCGAGGAAGCAACCCCCTTGCACCGGAGGAACCACCAAGAATaGGTTTCTGTGAAGGTGGGCTGCAGAGCTCAGGGAAGGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLEEATPLHRRNHQE*VSVKVGCRAQGRGW Trigger: CCAACCCCTTCCCTGAGCTCTGCAGCCCACCTTCACAGAAACCCATTCTTGGTGGTTCCTCCGGTGCAAGGGGGTTGCTTCCTCGAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS CCA 90 bp | GCCAGCCAGCAGGTCCGACTCTGCTCATCCTCACTGCAGAAGATGTaGAGCCCCTTGTGGCCGTTTCGAAGCTTGTTGGGCTTGACACAG | + |
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Preference number: 5 (lower is better) Translates to: ASQQVRLCSSSLQKM*SPLWPFRSLLGLTQ Trigger: CTGTGTCAAGCCCAACAAGCTTCGAAACGGCCACAAGGGGCTCCACATCTTCTGCAGTGAGGATGAGCAGAGTCGGACCTGCTGGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGCCCCGCTCCTCTCATAATGCCCCTCACTGGAACAGTACCTCAGGAGCTAAGATGTGGAGCCCCTaGTGGCCGTTTCGAAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLPRSSHNAPHWNSTSGAKMWSP*WPFRSL Trigger: CAAGCTTCGAAACGGCCACAAGGGGCTCCACATCTT...AGCTCCTGAGGTACTGTTCCAGTGAGGGGCATTATGAGAGGAGCGGGGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 90 bp | TGGAAGGCAGAGAGGTTGCCTGAAACTCCTCTTCTCGAAGTTTCCTaGTGCTGGGGATGGGCAAAGGCTGCGACCGCTTCACATCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: WKAERLPETPLLEVS*CWGWAKAATASHPL Trigger: CAGGGGATGTGAAGCGGTCGCAGCCTTTGCCCATCCCCAGCAGCAGGAAACTTCGAGAAGAGGAGTTTCAGGCAACCTCTCTGCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 90 bp | TTACGAAAGATGAAGCGGCTGTCTCCACCCACAGGCCAGGCCTCCTaGACTTCCACCACAAATTCATGGTCCTCCAGACCCCGCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LRKMKRLSPPTGQAS*TSTTNSWSSRPRSS Trigger: ACTGGAGCGGGGTCTGGAGGACCATGAATTTGTGGTGGAAGTGCAGGAGGCCTGGCCTGTGGGTGGAGACAGCCGCTTCATCTTTCGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS-3UTR CAA 90 bp | GATTACGGGTGGGGTATGAGACCTCCTGGGCTGCCCCGCTCCTCTCATAATGCCTGGAAGGCAGAGAGGTaGCCTGAAACTCCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: DYGWGMRPPGLPRSSHNAWKAER*PETPLL Trigger: GAGAAGAGGAGTTTCAGGCAACCTCTCTGCCTTCCA...GGCATTATGAGAGGAGCGGGGCAGCCCAGGAGGTCTCATACCCCACCCGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 90 bp | ATGCTTGACTTTCTGCAGATGGCACAAGGACAGGACAAAGCCCTGTaGGTTCCTCTGGCTCTCCCGGACCAGGAACACACCATCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: MLDFLQMAQGQDKAL*VPLALPDQEHTIHQ Trigger: CTGGTGGATGGTGTGTTCCTGGTCCGGGAGAGCCAGAGGAACCCACAGGGCTTTGTCCTGTCCTTGTGCCATCTGCAGAAAGTCAAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS TCA 90 bp | GAGACTGGGCCTGCTGATAATTCTTATATAGCTGTACCCCGTACTTaGAGAGCCGGAAGGCAGCCAGCCAGCAGGTCCGACTCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ETGPADNSYIAVPRT*RAGRQPASRSDSAH Trigger: ATGAGCAGAGTCGGACCTGCTGGCTGGCTGCCTTCCGGCTCTTCAAGTACGGGGTACAGCTATATAAGAATTATCAGCAGGCCCAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 90 bp | TGGGCATCCCATACAGCTTGCGGCCCTGGGTCACCACATAGACATTaGACTCATTCACATCTGCCACATACTGTAGGTGTCTGGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: WASHTACGPGSPHRH*THSHLPHTVGVWGP Trigger: AGGACCCCAGACACCTACAGTATGTGGCAGATGTGAATGAGTCCAATGTCTATGTGGTGACCCAGGGCCGCAAGCTGTATGGGATGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 90 bp | GTTCAGGAAGTTCTGGATGAGGTCTTCATGGGATATGCCTGTTTGTaGATCCAGACAGCTCGAGACCATCTTTTCTGGGAACAGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VQEVLDEVFMGYACL*IQTARDHLFWEQGV Trigger: CACACCCTGTTCCCAGAAAAGATGGTCTCGAGCTGTCTGGATGCACAAACAGGCATATCCCATGAAGACCTCATCCAGAACTTCCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | CTCGCTGTACCAGCATCTCACACACGTGACGAGCTGTaGCGCCCGCTGCCACCTCCACAGACCGGCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LAVPASHTRDEL*RPLPPPQTGRP Trigger: GGGCCTGCCGGTCTGTGGAGGTGGCAGCGGGCGCCACAGCTCGTCACGTGTGTGAGATGCTGGTACAGCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 72 bp | CAGCATCTCACACACGTGACGAGCTGTGGCGCCCGCTaGCACCTCCACAGACCGGCAGGCCCCATCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: QHLTHVTSCGAR*HLHRPAGPILT Trigger: AGTGAGGATGGGGCCTGCCGGTCTGTGGAGGTGGCAGCGGGCGCCACAGCTCGTCACGTGTGTGAGATGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 72 bp | AGCTTTCGACCTGACCCCCGGCCTGATCCCCGCAGCTaGAGGAAGCCCTGGATCTCAGGGAAGCTGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SFRPDPRPDPRS*RKPWISGKLPA Trigger: CGCTGGCAGCTTCCCTGAGATCCAGGGCTTCCTGCAGCTGCGGGGATCAGGCCGGGGGTCAGGTCGAAAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | GACCCCCGGCCTGATCCCCGCAGCTGCAGGAAGCCCTaGATCTCAGGGAAGCTGCCAGCGTTCAGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: DPRPDPRSCRKP*ISGKLPAFRKF Trigger: GAACTTCCTGAACGCTGGCAGCTTCCCTGAGATCCAGGGCTTCCTGCAGCTGCGGGGATCAGGCCGGGGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 72 bp | CTCTCCCGGACCAGGAACACACCATCCACCAGGCCCTaGTGTCCAATTAGCCGCTGGCTCTCCTCCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSRTRNTPSTRP*CPISRWLSSRE Trigger: CTCTCGGGAGGAGAGCCAGCGGCTAATTGGACAGCAGGGCCTGGTGGATGGTGTGTTCCTGGTCCGGGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 72 bp | AAGAGCCGGAAGGCAGCCAGCCAGCAGGTCCGACTCTaGTCATCCTCACTGCAGAAGATGTGGAGCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KSRKAASQQVRL*SSSLQKMWSPL Trigger: CAAGGGGCTCCACATCTTCTGCAGTGAGGATGAGCAGAGTCGGACCTGCTGGCTGGCTGCCTTCCGGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CAA 90 bp | CCTTCACCACACAGAGGCGGCTGGAGTCTCGAGGAAGCAACCCCCTaGCACCGGAGGAACCACCAAGAATGGGTTTCTGTGAAGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSPHRGGWSLEEATP*HRRNHQEWVSVKVG Trigger: GCCCACCTTCACAGAAACCCATTCTTGGTGGTTCCTCCGGTGCAAGGGGGTTGCTTCCTCGAGACTCCAGCCGCCTCTGTGTGGTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS GCA 72 bp | GCTGTCCAATTAGCCGCTGGCTCTCCTCCCGAGAGATaGGTCCATGAAACCAGGGCTGGGTGCGATGAATGG | + |
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Preference number: 6 (lower is better) Translates to: AVQLAAGSPPER*VHETRAGCDEW Trigger: CCATTCATCGCACCCAGCCCTGGTTTCATGGACGCATCTCTCGGGAGGAGAGCCAGCGGCTAATTGGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | GAAACTCCTCTTCTCGAAGTTTCCTGCTGCTGGGGATaGGCAAAGGCTGCGACCGCTTCACATCCCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: ETPLLEVSCCWG*AKAATASHPLA Trigger: CGCCAGGGGATGTGAAGCGGTCGCAGCCTTTGCCCATCCCCAGCAGCAGGAAACTTCGAGAAGAGGAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS CCA 72 bp | TGGCGCAGCAGGCAGGGCAGGATGCCTCGGTTCAGCTaGTGGAATTCTACCAGCTGCAGCAGGTCTGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: WRSRQGRMPRFS*WNSTSCSRSVK Trigger: TTTCACAGACCTGCTGCAGCTGGTAGAATTCCACCAGCTGAACCGAGGCATCCTGCCCTGCCTGCTGCGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CAA 72 bp | CACAGAGGCGGCTGGAGTCTCGAGGAAGCAACCCCCTaGCACCGGAGGAACCACCAAGAATGGGTTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HRGGWSLEEATP*HRRNHQEWVSV Trigger: CACAGAAACCCATTCTTGGTGGTTCCTCCGGTGCAAGGGGGTTGCTTCCTCGAGACTCCAGCCGCCTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019456.5 ENSMUST00000132771.8 |
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| CDS CCA 72 bp | TTTCTGCAGATGGCACAAGGACAGGACAAAGCCCTGTaGGTTCCTCTGGCTCTCCCGGACCAGGAACACACC | + |
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Preference number: 6 (lower is better) Translates to: FLQMAQGQDKAL*VPLALPDQEHT Trigger: GGTGTGTTCCTGGTCCGGGAGAGCCAGAGGAACCCACAGGGCTTTGTCCTGTCCTTGTGCCATCTGCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS GCA 72 bp | CACAGAAGCCGAAGTCAGTGGGCATCCCATACAGCTTaGGGCCCTGGGTCACCACATAGACATTGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: HRSRSQWASHTA*GPGSPHRHWTH Trigger: ATGAGTCCAATGTCTATGTGGTGACCCAGGGCCGCAAGCTGTATGGGATGCCCACTGACTTCGGCTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | AGAGCTTCCCGGGGGTTATCAATGACACGCCCCGCATaGCCAGAGAAGTCCATAGCCACTAGGGTATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RASRGLSMTRPA*PEKSIATRVLS Trigger: AGACAATACCCTAGTGGCTATGGACTTCTCTGGCCATGCGGGGCGTGTCATTGATAACCCCCGGGAAGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS TCA 72 bp | CCTGCTGATAATTCTTATATAGCTGTACCCCGTACTTaGAGAGCCGGAAGGCAGCCAGCCAGCAGGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: PADNSYIAVPRT*RAGRQPASRSD Trigger: GTCGGACCTGCTGGCTGGCTGCCTTCCGGCTCTTCAAGTACGGGGTACAGCTATATAAGAATTATCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | TGCTCATCCTCACTGCAGAAGATGTGGAGCCCCTTGTaGCCGTTTCGAAGCTTGTTGGGCTTGACACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CSSSLQKMWSPL*PFRSLLGLTQK Trigger: CTTCTGTGTCAAGCCCAACAAGCTTCGAAACGGCCACAAGGGGCTCCACATCTTCTGCAGTGAGGATGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CCA 72 bp | CATACAGCTTGCGGCCCTGGGTCACCACATAGACATTaGACTCATTCACATCTGCCACATACTGTAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HTACGPGSPHRH*THSHLPHTVGV Trigger: GACACCTACAGTATGTGGCAGATGTGAATGAGTCCAATGTCTATGTGGTGACCCAGGGCCGCAAGCTGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CAA 90 bp | AGCGTTCAGGAAGTTCTGGATGAGGTCTTCATGGGATATGCCTGTTaGTGCATCCAGACAGCTCGAGACCATCTTTTCTGGGAACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVQEVLDEVFMGYAC*CIQTARDHLFWEQG Trigger: ACCCTGTTCCCAGAAAAGATGGTCTCGAGCTGTCTGGATGCACAAACAGGCATATCCCATGAAGACCTCATCCAGAACTTCCTGAACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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| CDS CAA 72 bp | GAAGTTCTGGATGAGGTCTTCATGGGATATGCCTGTTaGTGCATCCAGACAGCTCGAGACCATCTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: EVLDEVFMGYAC*CIQTARDHLFW Trigger: CCAGAAAAGATGGTCTCGAGCTGTCTGGATGCACAAACAGGCATATCCCATGAAGACCTCATCCAGAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019456.5 |
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