Pregenerated sensors for GRB14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026888Ensembl transcript IDs: ENSMUST00000028252.14, ENSMUST00000149193.8, ENSMUST00000150643.8, ENSMUST00000156765.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAGTTTGGCTAAACAGCCATCCTAGCACAGTAATGCTTCAGCTTGCAAGGAAGTCTGTGAACTTCGTATaGCCATCATCCAGAGTATGG | + |
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Preference number: 2 (lower is better) Translates to: TVWLNSHPSTVMLQLARKSVNFV*PSSRVW Trigger: CCATACTCTGGATGATGGCCATACGAAGTTCACAGA...CTTCCTTGCAAGCTGAAGCATTACTGTGCTAGGATGGCTGTTTAGCCAAACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| 3UTR TCA 72 bp | AAATCTTCTTTTCACCATGATTTGTTTTCAGCCTTGTaGTCTCTCTCTCTCTCTCTAATCATTCTCCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: KSSFHHDLFSAL*SLSLSLIILLC Trigger: GCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAACAAATCATGGTGAAAAGAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCGGCCCGCGGCGCTCTaGCCGTCTTGCAGGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPRPAAL*PSCRDV Trigger: CACGTCCCTGCAAGACGGGCAGAGCGCCGCGGGCCG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGTCTGGGAGGGGGCACTaGGGCTTCCGTGATTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQSGRGH*GFRDSP Trigger: TGGGGAATCACGGAAGCCCCAGTGCCCCCTCCCAGA...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGGCACTGGGGCTTCCGTaGTTCCCCAGGCGTAAACAG | + |
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Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQALGLP*FPRRKQ Trigger: CTGTTTACGCCTGGGGAATCACGGAAGCCCCAGTGC...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTACCTGCGCCGGGTCCTaGGCGTCTCCCTTGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPTCAGS*ASPLPW Trigger: CCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCTTCACAGCAGAGCTCTaGGAGGGGGCACTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEVCELRMAIIQSMEQLTFTAEL*EGALGL Trigger: AAGCCCCAGTGCCCCCTCCCAGAGCTCTGCTGTGAA...GGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCATCATCTTCTGGGAGGGGGCACTaGGGCTTCCGTGATTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SVNFVWPSSRVWNSSPSSSGRGH*GFRDSP Trigger: TGGGGAATCACGGAAGCCCCAGTGCCCCCTCCCAGA...AGATGATGGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GTTTGGCTAAACAGCCATCCTAGCACAGTAATGCTTCAGCTTGCAAGGAAGGACTTCACAGCAGAGCTCTaGGAGGGGGCACTGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWLNSHPSTVMLQLARKDFTAEL*EGALGL Trigger: AAGCCCCAGTGCCCCCTCCCAGAGCTCTGCTGTGAA...GTCCTTCCTTGCAAGCTGAAGCATTACTGTGCTAGGATGGCTGTTTAGCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCAACGCGGCACACCTaGACTGCCAGCGGCGAATCC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPATRHT*TASGES Trigger: GGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCAGTGGGGTTGTCTATaGCTCTGCTCTTCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQQWGCL*LCSSHL Trigger: CAGGTGAGAAGAGCAGAGTCATAGACAACCCCACTG...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCCTTCAGCAGTCGGATaGCGGTCACCCAGCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPPSAVG*RSPSTS Trigger: GGACGTGCTGGGTGACCGCCATCCGACTGCTGAAGG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTCTGGGAGGGGGCACTaGGGCTTCCGTGATTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSGRGH*GFRDSP Trigger: TGGGGAATCACGGAAGCCCCAGTGCCCCCTCCCAGA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCTCTGTGGTGAAACCATaGTTGGGACCGATGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DEVCELRMAIIQSMEQLTSVVKP*LGPMES Trigger: GCTCTCCATCGGTCCCAACCATGGTTTCACCACAGA...GGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCACTGGGGCTTCCGTaGTTCCCCAGGCGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPALGLP*FPRRKQ Trigger: CTGTTTACGCCTGGGGAATCACGGAAGCCCCAGTGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | GATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCCGAATGATCAGCCGCTaGGCCTCATCTCTGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DEVCELRMAIIQSMEQLTRMISR*ASSLEI Trigger: AATTTCCAGAGATGAGGCTCAGCGGCTGATCATTCG...GGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCGAATGATCAGCCGCTaGGCCTCATCTCTGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQRMISR*ASSLEI Trigger: AATTTCCAGAGATGAGGCTCAGCGGCTGATCATTCG...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTTCACAGCAGAGCTCTaGGAGGGGGCACTGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPFTAEL*EGALGL Trigger: AAGCCCCAGTGCCCCCTCCCAGAGCTCTGCTGTGAA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGGTTCTGGGGTTACTCTaGCTATCCCGTACCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQVLGLL*LSRTKK Trigger: TTTCTTGGTACGGGATAGTCAGAGTAACCCCAGAAC...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149193.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGGCTGAGCCTCATCTCTaGAAATTCTGTGGTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLDEVCELRMAIIQSMEQAEPHL*KFCGET Trigger: GGTTTCACCACAGAATTTCCAGAGATGAGGCTCAGC...CTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCAGTGGGGTTGTCTATaGCTCTGCTCTTCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPQWGCL*LCSSHL Trigger: CAGGTGAGAAGAGCAGAGTCATAGACAACCCCACTG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | GATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCTTGTCCATGACTCATTaGCAGTACAAAAGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DEVCELRMAIIQSMEQLTLSMTH*QYKSSG Trigger: CCCAGAACTTTTGTACTGTCAATGAGTCATGGACAA...GGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149193.8 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGGGGTTGGGAATGGGTaGCTTTTCCAGAACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPGVGNG*LFQNIQ Trigger: CTGGATGTTCTGGAAAAGCCACCCATTCCCAACCCC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCTCAGGAAAGGGGTTaGGAATGGGTGGCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPAQERG*EWVAFP Trigger: TGGAAAAGCCACCCATTCCCAACCCCTTTCCTGAGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCTTCTTCCTTGAATTaGCCCTGGGAAACAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPASSLN*PWETGL Trigger: CAGGCCTGTTTCCCAGGGCCAATTCAAGGAAGAAGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTAGACAGCACTTCAGTTaGCAGCTCGTGGTCCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPRQHFS*QLVVLY Trigger: GTAGAGGACCACGAGCTGCCAACTGAAGTGCTGTCT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTCTGTGGTGAAACCATaGTTGGGACCGATGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSVVKP*LGPMES Trigger: GCTCTCCATCGGTCCCAACCATGGTTTCACCACAGA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCGAATGATCAGCCGCTaGGCCTCATCTCTGGAAATT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPRMISR*ASSLEI Trigger: AATTTCCAGAGATGAGGCTCAGCGGCTGATCATTCG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTCTGATACAGCTGCATaGCATCCTTCAGCAGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSDTAA*HPSAVG Trigger: TCCGACTGCTGAAGGATGGCATGCAGCTGTATCAGA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTTCAGGATCAACAGCTaGCAAACATCTCGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPFRINS*QTSRAV Trigger: CACAGCCCGAGATGTTTGCCAGCTGTTGATCCTGAA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGTTCTGGGGTTACTCTaGCTATCCCGTACCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPVLGLL*LSRTKK Trigger: TTTCTTGGTACGGGATAGTCAGAGTAACCCCAGAAC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCTGAAAAGCTGCAAATaGCGTGGTTCCTTGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPLKSCK*RGSLDV Trigger: CACATCCAAGGAACCACGGCATTTGCAGCTTTTCAG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTAAGCTGCAAATGCCGTaGTTCCTTGGATGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPKLQMP*FLGCAF Trigger: AAAGGCACATCCAAGGAACCACGGCATTTGCAGCTT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCTGAGCCTCATCTCTaGAAATTCTGTGGTGAAACC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPAEPHL*KFCGET Trigger: GGTTTCACCACAGAATTTCCAGAGATGAGGCTCAGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCCTCTAATGCTCTGCTaGTTTCATCCTCGCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPPLMLC*FHPRCK Trigger: TTTACAGCGAGGATGAAACCAGCAGAGCATTAGAGG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCATGTAAGAAGCCATaGATTTCAGGATACGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPACKKP*ISGYVL Trigger: CAGCACGTATCCTGAAATCCATGGCTTCTTACATGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCTGATACGCTTCTCATaGGTGACATGCTCTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPLIRFS*VTCSEN Trigger: ATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCCATCATCCAGAGTATaGAACAGCTCACCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPPSSRV*NSSPSS Trigger: AGATGATGGTGAGCTGTTCCATACTCTGGATGATGG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTCTGTGAACTTCGTATaGCCATCATCCAGAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSVNFV*PSSRVW Trigger: CCATACTCTGGATGATGGCCATACGAAGTTCACAGA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTTGTCCATGACTCATTaGCAGTACAAAAGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPLSMTH*QYKSSG Trigger: CCCAGAACTTTTGTACTGTCAATGAGTCATGGACAA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTACCATTCATTTCAGCTaGAAAAGACACCATGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPTIHFS*KRHHVL Trigger: GAGCACATGGTGTCTTTTGCAGCTGAAATGAATGGT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTAATTCACTGAAAAGCTaGAAATGCCGTGGTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPNSLKS*KCRGSL Trigger: CAAGGAACCACGGCATTTGCAGCTTTTCAGTGAATT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTACAGTACAAAAGTTCTaGGGTTACTCTGACTATCCC | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPTVQKF*GYSDYP Trigger: GGGATAGTCAGAGTAACCCCAGAACTTTTGTACTGT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 |
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| CDS-3UTR TCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCTTTCTAAACCTATGTaGGATAGGTGCTCAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPLSKPM*DRCSKR Trigger: CCTTTTTGAGCACCTATCTCACATAGGTTTAGAAAG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTAGACACCATGTGCTCTaGAAAGAAATACATTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPRHHVL*KEIHWV Trigger: AACCCAATGTATTTCTTTCCAGAGCACATGGTGTCT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCAAAAGACACCATGTaGTCTGGAAAGAAATACATT | + |
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Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPAKDTM*SGKKYI Trigger: AATGTATTTCTTTCCAGAGCACATGGTGTCTTTTGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCTTCTACCTTGGTATaGATGCATATAATTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VFSLVISLSLSNHSPLHPASTLV*MHIILI Trigger: TATCAGAATTATATGCATCCATACCAAGGTAGAAGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 90 bp | GCCGGGTCCTGGGCGTCTCCCTTGCCCTGGGCAACGCGGCACACCTaGACTGCCAGCGGCGAATCCTGGGCGCCTGCCCGGCCCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: AGSWASPLPWATRHT*TASGESWAPARPAA Trigger: CGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 90 bp | GTCCTGGGCGTCTCCCTTGCCCTGGGCAACGCGGCACACCTGCACTaGCAGCGGCGAATCCTGGGCGCCTGCCCGGCCCGCGGCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGVSLALGNAAHLH*QRRILGACPARGAL Trigger: CAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 90 bp | AGGGTCGCATCGGAGGCGGGGGACAGCGCGTGCAGTCCGGGGACCTaGGCCGGGTCCTGGGCGTCTCCCTTGCCCTGGGCAACGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVASEAGDSACSPGT*AGSWASPLPWATRH Trigger: GTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGCGCTGTCCCCCGCCTCCGATGCGACCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 90 bp | TTGCCCTGGGCAACGCGGCACACCTGCACTGCCAGCGGCGAATCCTaGGCGCCTGCCCGGCCCGCGGCGCTCTGCCCGTCTTGCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: LPWATRHTCTASGES*APARPAALCPSCRD Trigger: GTCCCTGCAAGACGGGCAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 90 bp | GGCAACGCGGCACACCTGCACTGCCAGCGGCGAATCCTGGGCGCCTaGCCGGCCCGCGGCGCTCTGCCCGTCTTGCAGGGACGTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GNAAHLHCQRRILGA*PARGALPVLQGRGH Trigger: ATGACCACGTCCCTGCAAGACGGGCAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 90 bp | GCGCGTGCAGTCCGGGGACCTGCGCCGGGTCCTGGGCGTCTCCCTTaGCCTGGGCAACGCGGCACACCTGCACTGCCAGCGGCGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: ARAVRGPAPGPGRLP*PGQRGTPALPAANP Trigger: AGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 90 bp | TGCAGTCCGGGGACCTGCGCCGGGTCCTGGGCGTCTCCCTTGCCCTaGGCAACGCGGCACACCTGCACTGCCAGCGGCGAATCCTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: CSPGTCAGSWASPLP*ATRHTCTASGESWA Trigger: CGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 90 bp | GATCAGCCGCTGAGCCTCATCTCTGGAAATTCTGTGGTGAAACCATaGTTGGGACCGATGGAGAGCCATGTTCACAGCAGAGCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQPLSLISGNSVVKP*LGPMESHVHSRALG Trigger: TCCCAGAGCTCTGCTGTGAACATGGCTCTCCATCGGTCCCAACCATGGTTTCACCACAGAATTTCCAGAGATGAGGCTCAGCGGCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS TCA 90 bp | GACTATCCCGTACCAAGAAAACTCCATCCACAGGCCCCTGCCGAATaGTCAGCCGCTGAGCCTCATCTCTGGAAATTCTGTGGTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: DYPVPRKLHPQAPAE*SAAEPHLWKFCGET Trigger: GGTTTCACCACAGAATTTCCAGAGATGAGGCTCAGCGGCTGATCATTCGGCAGGGGCCTGTGGATGGAGTTTTCTTGGTACGGGATAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 |
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| CDS TCA 90 bp | CATAGTGGTTCTTCAGGATCAACAGCTGGCAAACATCTCGGGCTGTaGTGTCACTGGGCACCTCTAATGCTCTGCTGGTTTCATCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HSGSSGSTAGKHLGL*CHWAPLMLCWFHPR Trigger: GCGAGGATGAAACCAGCAGAGCATTAGAGGTGCCCAGTGACATCACAGCCCGAGATGTTTGCCAGCTGTTGATCCTGAAGAACCACTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000156765.2 |
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| CDS-3UTR CAA 90 bp | AGCTGGATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCGTGGTGAAACCATGGTaGGGACCGATGGAGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWMRSVNFVWPSSRVWNSVVKPW*GPMESH Trigger: ATGGCTCTCCATCGGTCCCAACCATGGTTTCACCAC...GCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGAGACAGCACTTCAGTaGGCAGCTCGTGGTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPETALQ*AARGPL Trigger: TAGAGGACCACGAGCTGCCAACTGAAGTGCTGTCTC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGTGGTGAAACCATGGTaGGGACCGATGGAGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPVVKPW*GPMESH Trigger: ATGGCTCTCCATCGGTCCCAACCATGGTTTCACCAC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTCGGGGCCCTCCTGCTTaGTTAGGCTTTAAGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPRGPPA*LGFKQN Trigger: ATTCTGCTTAAAGCCTAACAAAGCAGGAGGGCCCCG...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTAGCGCTTCAGTGGGGTaGTCTATGACTCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSASVG*SMTLLF Trigger: GAAGAGCAGAGTCATAGACAACCCCACTGAAGCGCT...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000150643.8 |
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| CDS GCA 90 bp | AAGAAGCCATGGATTTCAGGATACGTGCTGGAGCTTAAAAACACCTaGAGTATCTGTGTAGGGGATCTGTCACCATTCATTTCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KKPWISGYVLELKNT*SICVGDLSPFISAA Trigger: TGCAGCTGAAATGAATGGTGACAGATCCCCTACACAGATACTGCAGGTGTTTTTAAGCTCCAGCACGTATCCTGAAATCCATGGCTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000156765.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTCACCTGCTTCTTCCTaGAATTGGCCCTGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPSPASS*NWPWET Trigger: TGTTTCCCAGGGCCAATTCAAGGAAGAAGCAGGTGA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CAA 90 bp | GATGAGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATGGAACAGCTCACCTTTGTCCATGACTCATaGACAGTACAAAAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DEVCELRMAIIQSMEQLTFVHDS*TVQKFW Trigger: CCAGAACTTTTGTACTGTCAATGAGTCATGGACAAA...GGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149193.8 |
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| CDS GCA 90 bp | GGGAATTCTCTGATACGCTTCTCATGGGTGACATGCTCTGAGAATTaGAGGCGCTTCTACCTTGGTATGGATGCATATAATTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: GNSLIRFSWVTCSEN*RRFYLGMDAYNSDT Trigger: TGTATCAGAATTATATGCATCCATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAGAGAATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTGCAGGCGCTTCTACCTaGGTATGGATGCATATAATT | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPAGAST*VWMHII Trigger: AATTATATGCATCCATACCAAGGTAGAAGCGCCTGC...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS-3UTR CAA 90 bp | GTTTTCAGCCTTGTGATCTCTCTCTCTCTCTCTAATCATTCTCCTTTGCATCCTTTTGTCCATGACTCATaGACAGTACAAAAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSLVISLSLSNHSPLHPFVHDS*TVQKFW Trigger: CCAGAACTTTTGTACTGTCAATGAGTCATGGACAAA...AGGATGCAAAGGAGAATGATTAGAGAGAGAGAGAGAGATCACAAGGCTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 |
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| CDS GCA 72 bp | TCGGAGGCGGGGGACAGCGCGTGCAGTCCGGGGACCTaGGCCGGGTCCTGGGCGTCTCCCTTGCCCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SEAGDSACSPGT*AGSWASPLPWA Trigger: TGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGCGCTGTCCCCCGCCTCCGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | GCAACGCGGCACACCTGCACTGCCAGCGGCGAATCCTaGGCGCCTGCCCGGCCCGCGGCGCTCTGCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATRHTCTASGES*APARPAALCPS Trigger: AGACGGGCAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 72 bp | GCACACCTGCACTGCCAGCGGCGAATCCTGGGCGCCTaGCCGGCCCGCGGCGCTCTGCCCGTCTTGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHLHCQRRILGA*PARGALPVLQG Trigger: TCCCTGCAAGACGGGCAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 72 bp | GTCTCCCTTGCCCTGGGCAACGCGGCACACCTGCACTaGCAGCGGCGAATCCTGGGCGCCTGCCCGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VSLALGNAAHLH*QRRILGACPAR Trigger: GCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | GACAGCGCGTGCAGTCCGGGGACCTGCGCCGGGTCCTaGGCGTCTCCCTTGCCCTGGGCAACGCGGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: DSACSPGTCAGS*ASPLPWATRHT Trigger: GGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGCGCTGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | GGGACCTGCGCCGGGTCCTGGGCGTCTCCCTTGCCCTaGGCAACGCGGCACACCTGCACTGCCAGCGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTCAGSWASPLP*ATRHTCTASGE Trigger: TTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CAA 90 bp | AGCGCGTGCAGTCCGGGGACCTGCGCCGGGTCCTGGGCGTCTCCCTaGCCCTGGGCAACGCGGCACACCTGCACTGCCAGCGGCGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SACSPGTCAGSWASP*PWATRHTCTASGES Trigger: GGATTCGCCGCTGGCAGTGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGCGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CAA 90 bp | CACGCGAGGCCTTCCTCAACAGCAACCGAAAGCGCTTCAGTGGGGTaGTCTATGACTCTGCTCTTCTCACCTGAGAAGTCCATTGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: HARPSSTATESASVG*SMTLLFSPEKSIAT Trigger: AGTAGCAATGGACTTCTCAGGTGAGAAGAGCAGAGTCATAGACAACCCCACTGAAGCGCTTTCGGTTGCTGTTGAGGAAGGCCTCGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000150643.8 |
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| CDS TCA 72 bp | TCTTCAGGATCAACAGCTGGCAAACATCTCGGGCTGTaGTGTCACTGGGCACCTCTAATGCTCTGCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSGSTAGKHLGL*CHWAPLMLCWF Trigger: AAACCAGCAGAGCATTAGAGGTGCCCAGTGACATCACAGCCCGAGATGTTTGCCAGCTGTTGATCCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000156765.2 |
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| CDS GCA 72 bp | CTTGGTATGGATGCATATAATTCTGATACAGCTGCATaGCATCCTTCAGCAGTCGGATGGCGGTCACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGMDAYNSDTAA*HPSAVGWRSPS Trigger: GCTGGGTGACCGCCATCCGACTGCTGAAGGATGGCATGCAGCTGTATCAGAATTATATGCATCCATACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | CTGAGCCTCATCTCTGGAAATTCTGTGGTGAAACCATaGTTGGGACCGATGGAGAGCCATGTTCACAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSLISGNSVVKP*LGPMESHVHSR Trigger: TCTGCTGTGAACATGGCTCTCCATCGGTCCCAACCATGGTTTCACCACAGAATTTCCAGAGATGAGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS CAA 72 bp | AGCCTCATCTCTGGAAATTCTGTGGTGAAACCATGGTaGGGACCGATGGAGAGCCATGTTCACAGCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLISGNSVVKPW*GPMESHVHSRA Trigger: AGCTCTGCTGTGAACATGGCTCTCCATCGGTCCCAACCATGGTTTCACCACAGAATTTCCAGAGATGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028252.14 ENSMUST00000149193.8 ENSMUST00000150643.8 |
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| CDS CAA 90 bp | GACAGCACAGATGTAAGCGGAGAGCAGCAGAGCTCAGGAAAGGGGTaGGGAATGGGTGGCTTTTCCAGAACATCCAGATCTTTCATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DSTDVSGEQQSSGKG*GMGGFSRTSRSFIF Trigger: AAAAATGAAAGATCTGGATGTTCTGGAAAAGCCACCCATTCCCAACCCCTTTCCTGAGCTCTGCTGCTCTCCGCTTACATCTGTGCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CAA 90 bp | ACAGCTTATTGTCTTCTTCCACTCCCCAGTGAGACAGCACTTCAGTaGGCAGCTCGTGGTCCTCTACGGTTCTTTCTAAACCTATGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAYCLLPLPSETALQ*AARGPLRFFLNLCE Trigger: CTCACATAGGTTTAGAAAGAACCGTAGAGGACCACGAGCTGCCAACTGAAGTGCTGTCTCACTGGGGAGTGGAAGAAGACAATAAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000156765.2 |
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| CDS TCA 72 bp | AGCTCGTGGTCCTCTACGGTTCTTTCTAAACCTATGTaGGATAGGTGCTCAAAAAGGGTCCAGCTGTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSSTVLSKPM*DRCSKRVQLLS Trigger: CGACAACAGCTGGACCCTTTTTGAGCACCTATCTCACATAGGTTTAGAAAGAACCGTAGAGGACCACGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028252.14 ENSMUST00000156765.2 |
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| CDS TCA 72 bp | GAATTCTCTGATACGCTTCTCATGGGTGACATGCTCTaGGAATTGCAGGCGCTTCTACCTTGGTATGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: EFSDTLLMGDML*ELQALLPWYGC Trigger: GCATCCATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAGAGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 72 bp | CTAGGGAATTCTCTGATACGCTTCTCATGGGTGACATaGTCTGAGAATTGCAGGCGCTTCTACCTTGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: LGNSLIRFSWVT*SENCRRFYLGM Trigger: CATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAGAGAATTCCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | CCATTGCTACTAGGGAATTCTCTGATACGCTTCTCATaGGTGACATGCTCTGAGAATTGCAGGCGCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: PLLLGNSLIRFS*VTCSENCRRFY Trigger: GTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAGAGAATTCCCTAGTAGCAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS GCA 72 bp | CTGATACGCTTCTCATGGGTGACATGCTCTGAGAATTaGAGGCGCTTCTACCTTGGTATGGATGCATATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LIRFSWVTCSEN*RRFYLGMDAYN Trigger: ATTATATGCATCCATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | CATGCTCTGAGAATTGCAGGCGCTTCTACCTTGGTATaGATGCATATAATTCTGATACAGCTGCATGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HALRIAGASTLV*MHIILIQLHAI Trigger: GATGGCATGCAGCTGTATCAGAATTATATGCATCCATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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| CDS CCA 72 bp | AGGTCTGTGAACTTCGTATGGCCATCATCCAGAGTATaGAACAGCTCACCATCATCTTCTACGGGTATAATT | + |
|
Preference number: 6 (lower is better) Translates to: RSVNFVWPSSRV*NSSPSSSTGII Trigger: AATTATACCCGTAGAAGATGATGGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028252.14 |
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