Pregenerated sensors for GRB10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020176Ensembl transcript IDs: ENSMUST00000093321.12, ENSMUST00000109653.8, ENSMUST00000109654.8, ENSMUST00000143386.8, ENSMUST00000143915.2, ENSMUST00000150972.8
Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCTaGTGGCTTAGGGGGTTTTCAGTAGGGTGCAGAGGCCATCAAGCT | + |
Preference number: 1 (lower is better) Translates to: LTLSQQRQSLCIPCS*WLRGFSVGCRGHQA Trigger: AGCTTGATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | GTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTaGTCCTGCTGGCTTAGGGGGTTTTCAGTAGGGTGCAGAGGCCAT | + |
Preference number: 1 (lower is better) Translates to: VLLTLSQQRQSLCIP*SCWLRGFSVGCRGH Trigger: ATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 90 bp | ACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCTGCTaGCTTAGGGGGTTTTCAGTAGGGTGCAGAGGCCATCAAGCTTTC | + |
Preference number: 1 (lower is better) Translates to: TLSQQRQSLCIPCSC*LRGFSVGCRGHQAF Trigger: GAAAGCTTGATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATaGAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCT | + |
Preference number: 1 (lower is better) Translates to: CSESLGGSRCVFSPS*RSLFSVPVSLPPAS Trigger: AGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | CATTGTGAGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTaGATACCCTGCTCCTGCTGGCTTAGGGGGTTTTCAGTAGGGTGC | + |
Preference number: 1 (lower is better) Translates to: HCEVLLTLSQQRQSL*IPCSCWLRGFSVGC Trigger: GCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTCACAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 90 bp | GCTGGCGATCTCGGGGCCACTGAAGTCTGCTACACTCAAGGTGGGTaGGTTGCAGCCTTCAACAATTCACTTCGGCAAGGGAAGTACAAA | + |
Preference number: 1 (lower is better) Translates to: AGDLGATEVCYTQGG*VAAFNNSLRQGKYK Trigger: TTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAGGCTGCAACCCACCCACCTTGAGTGTAGCAGACTTCAGTGGCCCCGAGATCGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 90 bp | CAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGAACAGTaGGTTTTCCAAAGTAATGAGGTCTCCAGCACCGTGGAGAACGAG | + |
Preference number: 1 (lower is better) Translates to: QSEAEVMQLCCAGEQ*VFQSNEVSSTVENE Trigger: CTCGTTCTCCACGGTGCTGGAGACCTCATTACTTTGGAAAACTCACTGTTCCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 90 bp | TTTACCGGTCACTGCAGTTTGCACTATGACATCACAAATCTACGATaGGCTAGAAGCGCCCTCGGAGGCACAGCGATCGAACAGGCTGTC | + |
Preference number: 1 (lower is better) Translates to: FTGHCSLHYDITNLR*ARSALGGTAIEQAV Trigger: GACAGCCTGTTCGATCGCTGTGCCTCCGAGGGCGCTTCTAGCTCATCGTAGATTTGTGATGTCATAGTGCAAACTGCAGTGACCGGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | CTCTGCATACCCTGCTCCTGCTGGCTTAGGGGGTTTTCAGTAGGGTaGAGAGGCCATCAAGCTTTCAAAGACTCAAAGCCAGCTTATGCT | + |
Preference number: 1 (lower is better) Translates to: LCIPCSCWLRGFSVG*RGHQAFKDSKPAYA Trigger: AGCATAAGCTGGCTTTGAGTCTTTGAAAGCTTGATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 90 bp | ATGAGGTCTCCAGCACCGTGGAGAACGAGACACACTAATAATACATaGCCAGACGTCAGCACAACAACAACGATGACCAGACTGTGGCAG | + |
Preference number: 1 (lower is better) Translates to: MRSPAPWRTRHTNNT*PDVSTTTTMTRLWQ Trigger: CTGCCACAGTCTGGTCATCGTTGTTGTTGTGCTGACGTCTGGTCATGTATTATTAGTGTGTCTCGTTCTCCACGGTGCTGGAGACCTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | GTGAACTACAGTGTTTCTCTACTGTGGGCCAGCTTGCCACTGGCCTaGTTTACAAAGCGCTGTCATATCTATCTTCCACTATGCTGTCAA | + |
Preference number: 1 (lower is better) Translates to: VNYSVSLLWASLPLA*FTKRCHIYLPLCCQ Trigger: TTGACAGCATAGTGGAAGATAGATATGACAGCGCTTTGTAAAGCAGGCCAGTGGCAAGCTGGCCCACAGTAGAGAAACACTGTAGTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 90 bp | GCAAACATCATGCTCCTAAAATCTGTCCAATGTTCACATCCATTGTaGGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCAT | + |
Preference number: 1 (lower is better) Translates to: ANIMLLKSVQCSHPL*GTSHPKPAEAKPLH Trigger: ATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTCACAATGGATGTGAACATTGGACAGATTTTAGGAGCATGATGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | TTGTTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATaGCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCATGGAG | + |
Preference number: 1 (lower is better) Translates to: LLSVCFSRQSCLLLS*LINHQGDNRGSFME Trigger: CTCCATGAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 90 bp | CTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTTaGACTATGACATCACAAATCTACGATGAGCTAGAAGCGCCCTCG | + |
Preference number: 1 (lower is better) Translates to: LKTVTCQVILPVTAV*TMTSQIYDELEAPS Trigger: CGAGGGCGCTTCTAGCTCATCGTAGATTTGTGATGTCATAGTGCAAACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 90 bp | ATAGAACAGAGTCTACCTATTAAAACCCTAAAAACCCAAAGCATTTaGCAGTTTCCTTCTCAACTTAGTCCAGGTGGTTACACGGAGTCG | + |
Preference number: 1 (lower is better) Translates to: IEQSLPIKTLKTQSI*QFPSQLSPGGYTES Trigger: CGACTCCGTGTAACCACCTGGACTAAGTTGAGAAGGAAACTGCCAAATGCTTTGGGTTTTTAGGGTTTTAATAGGTAGACTCTGTTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CAA 90 bp | GCGATCTCGGGGCCACTGAAGTCTGCTACACTCAAGGTGGGTGGGTaGCAGCCTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTC | + |
Preference number: 2 (lower is better) Translates to: AISGPLKSATLKVGG*QPSTIHFGKGSTKF Trigger: GAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAGGCTGCAACCCACCCACCTTGAGTGTAGCAGACTTCAGTGGCCCCGAGATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR GCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCGAGCCAAACCCACACTaGCGCAACCTGCAGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: CLLLSCLINHQGDNRGSFEPNPH*RNLQRA Trigger: TGCTCTCTGCAGGTTGCGGCAGTGTGGGTTTGGCTC...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGATACCCTGCTCCTGCTaGCTTAGGGGGTTTTCAGTA | + |
Preference number: 2 (lower is better) Translates to: LSTMANQKWLPGEHFNESIPCSC*LRGFSV Trigger: TACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTAT...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CAA 90 bp | GTAGGTCGGTTGGTACCGATCAAAAAGCCATGTTGTTCTGAGTCCTaGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTC | + |
Preference number: 2 (lower is better) Translates to: VGRLVPIKKPCCSES*GGSRCVFSPSCRSL Trigger: GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGGTACCAACCGACCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR-3UTR GCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCGTGTTCTCACCCTCATaGAGATCTCTCTTCTCCGTT | + |
Preference number: 2 (lower is better) Translates to: TGSLPSPNFKWLTQREVVVFSPS*RSLFSV Trigger: AACGGAGAAGAGAGATCTGCATGAGGGTGAGAACAC...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR-3UTR GCA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTATACTGTGGGCCAGCTTaGCACTGGCCTGCTTTACAA | + |
Preference number: 2 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVYCGPA*HWPALQ Trigger: TTGTAAAGCAGGCCAGTGGCAAGCTGGCCCACAGTA...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTAGCAGCTGTGCTGTGCTaGGGAACAGTGAGTTTTCCA | + |
Preference number: 2 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVAAVLC*GTVSFP Trigger: TGGAAAACTCACTGTTCCCCAGCACAGCACAGCTGC...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR GCA 90 bp | TTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATGCCTGATAAATGTTTCTTCCCACACTTaGACTGGATCTCTTCCCTCC | + |
Preference number: 2 (lower is better) Translates to: LSVCFSRQSCLLLSCLINVSSHT*TGSLPS Trigger: GGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGAAAC...ATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCGGTTTTCACCCTACGTaGCCTAATCAAAATCGTCAT | + |
Preference number: 2 (lower is better) Translates to: CLLLSCLINHQGDNRGSFGFHPT*PNQNRH Trigger: ATGACGATTTTGATTAGGCCACGTAGGGTGAAAACC...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | CTTCTCAACTTAGTCCAGGTGGTTACACGGAGTCGTCATTTAGAAAAGAAAATCAGGTCTCCAGCACCGTaGAGAACGAGACACACTAAT | + |
Preference number: 2 (lower is better) Translates to: LLNLVQVVTRSRHLEKKIRSPAP*RTRHTN Trigger: ATTAGTGTGTCTCGTTCTCCACGGTGCTGGAGACCT...GATTTTCTTTTCTAAATGACGACTCCGTGTAACCACCTGGACTAAGTTGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTACTATGCTGTCAACCATaGCAAATCAGAAGTGGCTCC | + |
Preference number: 2 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVLCCQP*QIRSGS Trigger: GGAGCCACTTCTGATTTGCCATGGTTGACAGCATAG...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR TCA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTATGTGCTGGGGAACAGTaGGTTTTCCAAAGTAATGAG | + |
Preference number: 2 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVCAGEQ*VFQSNE Trigger: CTCATTACTTTGGAAAACTCACTGTTCCCCAGCACA...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR TCA 90 bp | CTTCTCAACTTAGTCCAGGTGGTTACACGGAGTCGTCATTTAGAAAAGAAAATCTGTGCTGGGGAACAGTaGGTTTTCCAAAGTAATGAG | + |
Preference number: 2 (lower is better) Translates to: LLNLVQVVTRSRHLEKKICAGEQ*VFQSNE Trigger: CTCATTACTTTGGAAAACTCACTGTTCCCCAGCACA...GATTTTCTTTTCTAAATGACGACTCCGTGTAACCACCTGGACTAAGTTGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR GCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAATGCTAGGTGTCAACTaGGGTTGTCACCTTTTATCT | + |
Preference number: 2 (lower is better) Translates to: LQQFTSAREVQSSTSNQLMLGVN*GCHLLS Trigger: AGATAAAAGGTGACAACCGCAGTTGACACCTAGCAT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTAGGTTTTCACCCTACGTaGCCTAATCAAAATCGTCAT | + |
Preference number: 2 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVGFHPT*PNQNRH Trigger: ATGACGATTTTGATTAGGCCACGTAGGGTGAAAACC...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAAGCAGACTTTCTGGGTaGTATCAAGAAAGGGAAATG | + |
Preference number: 2 (lower is better) Translates to: LQQFTSAREVQSSTSNQLSRLSG*YQEREM Trigger: CATTTCCCTTTCTTGATACCACCCAGAAAGTCTGCT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR TCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACAAAAATTCTTTGTCTaGTCTGAGTTGCAAAGCCAC | + |
Preference number: 2 (lower is better) Translates to: LQQFTSAREVQSSTSNQLQKFFV*SELQSH Trigger: GTGGCTTTGCAACTCAGATCAGACAAAGAATTTTTG...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR TCA 90 bp | TCTGACCTTAAGTCAGCAAAAAGAAATGAGCACGGTAAAACTGAAATGTCTGTTCGGTTGCATGGTCTGTaGACTACAGTGTTTCTCTAC | + |
Preference number: 2 (lower is better) Translates to: SDLKSAKRNEHGKTEMSVRLHGL*TTVFLY Trigger: GTAGAGAAACACTGTAGTTCACAGACCATGCAACCG...AACAGACATTTCAGTTTTACCGTGCTCATTTCTTTTTGCTGACTTAAGGTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | GCTGCCTGTGCAAAGGGCTGGCGATCTCGGGGCCACTaGAGTCTGCTACACTCAAGGTGGGTGGGTTGCAGC | + |
Preference number: 3 (lower is better) Translates to: AACAKGWRSRGH*SLLHSRWVGCS Trigger: GCTGCAACCCACCCACCTTGAGTGTAGCAGACTTCAGTGGCCCCGAGATCGCCAGCCCTTTGCACAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 72 bp | AGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCTaGTGGCTTAGGGGGTTTTCAGTAGGGTGCAGAGGC | + |
Preference number: 3 (lower is better) Translates to: SQQRQSLCIPCS*WLRGFSVGCRG Trigger: GCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 72 bp | ACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTaGTCCTGCTGGCTTAGGGGGTTTTCAGTAGGGTGC | + |
Preference number: 3 (lower is better) Translates to: TLSQQRQSLCIP*SCWLRGFSVGC Trigger: GCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 72 bp | CAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCTGCTaGCTTAGGGGGTTTTCAGTAGGGTGCAGAGGCCAT | + |
Preference number: 3 (lower is better) Translates to: QQRQSLCIPCSC*LRGFSVGCRGH Trigger: ATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 72 bp | CTGCAGAGGGTAAAGGCAGCGATTATTCTACAACAGTaGGCGGCTGTGAAAATGGGAGGCACAGGGCACCCC | + |
Preference number: 3 (lower is better) Translates to: LQRVKAAIILQQ*AAVKMGGTGHP Trigger: GGGGTGCCCTGTGCCTCCCATTTTCACAGCCGCCCACTGTTGTAGAATAATCGCTGCCTTTACCCTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 72 bp | CTCGGGGCCACTGAAGTCTGCTACACTCAAGGTGGGTaGGTTGCAGCCTTCAACAATTCACTTCGGCAAGGG | + |
Preference number: 3 (lower is better) Translates to: LGATEVCYTQGG*VAAFNNSLRQG Trigger: CCCTTGCCGAAGTGAATTGTTGAAGGCTGCAACCCACCCACCTTGAGTGTAGCAGACTTCAGTGGCCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 72 bp | GTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTaGATACCCTGCTCCTGCTGGCTTAGGGGGTTTTCA | + |
Preference number: 3 (lower is better) Translates to: VLLTLSQQRQSL*IPCSCWLRGFS Trigger: TGAAAACCCCCTAAGCCAGCAGGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | GCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTaGCGCAGAGGGAGGTGGTCCTGTTTGATCCACAGC | + |
Preference number: 3 (lower is better) Translates to: ALDLFPPPILNG*RRGRWSCLIHS Trigger: GCTGTGGATCAAACAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | GGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATaGGTCGGGACAGGCAATCTAGTGGCTAACTCAGGT | + |
Preference number: 3 (lower is better) Translates to: GKSEVAPWGALQ*VGTGNLVANSG Trigger: ACCTGAGTTAGCCACTAGATTGCCTGTCCCGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 72 bp | CCCTGCTCCTGCTGGCTTAGGGGGTTTTCAGTAGGGTaGAGAGGCCATCAAGCTTTCAAAGACTCAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: PCSCWLRGFSVG*RGHQAFKDSKP Trigger: TGGCTTTGAGTCTTTGAAAGCTTGATGGCCTCTGCACCCTACTGAAAACCCCCTAAGCCAGCAGGAGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 72 bp | TCTTCCACTATGCTGTCAACCATGGCAAATCAGAAGTaGCTCCCTGGGGAGCACTTCAATGAGTCGGGACAG | + |
Preference number: 3 (lower is better) Translates to: SSTMLSTMANQK*LPGEHFNESGQ Trigger: CTGTCCCGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAGCATAGTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | CACTGCAGTTTGCACTATGACATCACAAATCTACGATaGGCTAGAAGCGCCCTCGGAGGCACAGCGATCGAA | + |
Preference number: 3 (lower is better) Translates to: HCSLHYDITNLR*ARSALGGTAIE Trigger: TTCGATCGCTGTGCCTCCGAGGGCGCTTCTAGCTCATCGTAGATTTGTGATGTCATAGTGCAAACTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CCA 72 bp | ACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATaGCTGACGCAGAGGGAGGTGGTCCTGTTTGATCCA | + |
Preference number: 3 (lower is better) Translates to: TCTGSLPSPNFK*LTQREVVLFDP Trigger: TGGATCAAACAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
||
3UTR CCA 72 bp | TGGTACCGATCAAAAAGCCATGTTGTTCTGAGTCCTTaGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCA | + |
Preference number: 3 (lower is better) Translates to: WYRSKSHVVLSP*VGVGVCSHPHA Trigger: TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGGTACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
||
3UTR TCA 72 bp | CCAGCACCGTGGAGAACGAGACACACTAATAATACATaGCCAGACGTCAGCACAACAACAACGATGACCAGA | + |
Preference number: 3 (lower is better) Translates to: PAPWRTRHTNNT*PDVSTTTTMTR Trigger: TCTGGTCATCGTTGTTGTTGTGCTGACGTCTGGTCATGTATTATTAGTGTGTCTCGTTCTCCACGGTGCTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
3UTR GCA 72 bp | AGTGTTTCTCTACTGTGGGCCAGCTTGCCACTGGCCTaGTTTACAAAGCGCTGTCATATCTATCTTCCACTA | + |
Preference number: 3 (lower is better) Translates to: SVSLLWASLPLA*FTKRCHIYLPL Trigger: TAGTGGAAGATAGATATGACAGCGCTTTGTAAAGCAGGCCAGTGGCAAGCTGGCCCACAGTAGAGAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
3UTR CCA 72 bp | ACTACAGTGTTTCTCTACTGTGGGCCAGCTTGCCACTaGCCTGCTTTACAAAGCGCTGTCATATCTATCTTC | + |
Preference number: 3 (lower is better) Translates to: TTVFLYCGPACH*PALQSAVISIF Trigger: GAAGATAGATATGACAGCGCTTTGTAAAGCAGGCCAGTGGCAAGCTGGCCCACAGTAGAGAAACACTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | CTGAGTTGCAAAGCCACATCCTCTCCTACCATAGGCTaGGTACAACATCGACAACGAAGAAGGAGTGCAAAA | + |
Preference number: 3 (lower is better) Translates to: LSCKATSSPTIG*VQHRQRRRSAK Trigger: TTTTGCACTCCTTCTTCGTTGTCGATGTTGTACTCAGCCTATGGTAGGAGAGGATGTGGCTTTGCAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | ATAATACATGACCAGACGTCAGCACAACAACAACGATaGCCAGACTGTGGCAGCTTGACTGCGTCCACAAAA | + |
Preference number: 3 (lower is better) Translates to: IIHDQTSAQQQR*PDCGSLTASTK Trigger: TTTTGTGGACGCAGTCAAGCTGCCACAGTCTGGTCATCGTTGTTGTTGTGCTGACGTCTGGTCATGTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR TCA 72 bp | ATGCTCCTAAAATCTGTCCAATGTTCACATCCATTGTaGGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAG | + |
Preference number: 3 (lower is better) Translates to: MLLKSVQCSHPL*GTSHPKPAEAK Trigger: CTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTCACAATGGATGTGAACATTGGACAGATTTTAGGAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR-3UTR CAA 90 bp | CTTCTCAACTTAGTCCAGGTGGTTACACGGAGTCGTCATTTAGAAAAGAAAATCACATCGCGGTTTGAATaGTCAAGGTTATTCCAGGGC | + |
Preference number: 3 (lower is better) Translates to: LLNLVQVVTRSRHLEKKITSRFE*SRLFQG Trigger: GCCCTGGAATAACCTTGACAATTCAAACCGCGATGT...GATTTTCTTTTCTAAATGACGACTCCGTGTAACCACCTGGACTAAGTTGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
3UTR TCA 72 bp | AGGTTTTGTCTATTAGTTAACACCCTCTGCATTCCCTaGAAACGGTTACATGTCAGGTCATTTTACCGGTCA | + |
Preference number: 3 (lower is better) Translates to: RFCLLVNTLCIP*KRLHVRSFYRS Trigger: TGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAGAGGGTGTTAACTAATAGACAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR GCA 72 bp | GTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTTaGACTATGACATCACAAATCTACGATGAGCTAGAA | + |
Preference number: 3 (lower is better) Translates to: VTCQVILPVTAV*TMTSQIYDELE Trigger: TTCTAGCTCATCGTAGATTTGTGATGTCATAGTGCAAACTGCAGTGACCGGTAAAATGACCTGACATGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
3UTR GCA 72 bp | TTCATTTGTTGTAATAACATCTCGTGGAAACACGGTTaGATGGTCTGTGAACTACAGTGTTTCTCTACTGTG | + |
Preference number: 3 (lower is better) Translates to: FICCNNISWKHG*MVCELQCFSTV Trigger: CACAGTAGAGAAACACTGTAGTTCACAGACCATGCAACCGTGTTTCCACGAGATGTTATTACAACAAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGCAGGGGCCGCACCAGTaGGCTCCGGAAATGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVQGPHQ*APEMGW Trigger: CCAACCCATTTCCGGAGCTCACTGGTGCGGCCCCTG...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGTGCAGAAGCTGCGCCTaGCCACCGTTGGACTGCTGG | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGCRSCA*PPLDCW Trigger: CCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCA...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGGAAATGCTTGGCAGGTaGCTGGCTCGGAGGAGGAGG | + |
Preference number: 4 (lower is better) Translates to: RLADISLKLRSCSCAVLGEMLGR*LARRRR Trigger: CCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATTTC...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093321.12 |
||
CDS-3UTR TCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTCAGGGGCCGCACCAGTaGGCTCCGGAAATGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSQGPHQ*APEMGW Trigger: CCAACCCATTTCCGGAGCTCACTGGTGCGGCCCCTG...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGCTGCTCCCTGGTTGCTaGCATGCTGGCCATCCTCAA | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVLLPGC*HAGHPQ Trigger: TTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAG...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | GAGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCATCATGCTTGGCAGGTaGCTGGCTCGGAGGAGGAGG | + |
Preference number: 4 (lower is better) Translates to: EVLLTLSQQRQSLCIPCSIMLGR*LARRRR Trigger: CCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGAT...GGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCCTCCTGAAGGCGCCTaGGAATGTGCACAGGCTGCG | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVPPEGA*ECAQAA Trigger: CGCAGCCTGTGCACATTCTCAGGCGCCTTCAGGAGG...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCCCTCCTGAAGGCGCCTaGGAATGTGCACAGGCTGCG | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLPPEGA*ECAQAA Trigger: CGCAGCCTGTGCACATTCTCAGGCGCCTTCAGGAGG...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCCCTCCTGAAGGCGCCTaGGAATGTGCACAGGCTGCG | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFPPEGA*ECAQAA Trigger: CGCAGCCTGTGCACATTCTCAGGCGCCTTCAGGAGG...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGCCCTGGTTGCTGGCATaGTGGCCATCCTCAAGAAGT | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGPWLLA*WPSSRS Trigger: ACTTCTTGAGGATGGCCAGCATGCCAGCAACCAGGG...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGAAATTCTGCAGAAGCTaGGCCTGGCCACCGTTGGAC | + |
Preference number: 4 (lower is better) Translates to: RLADISLKLRSCSCAVLGKFCRS*AWPPLD Trigger: GTCCAACGGTGGCCAGGCGCAGCTTCTGCAGAATTT...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | GAGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCCTGCTCCCTGGTTGCTaGCATGCTGGCCATCCTCAA | + |
Preference number: 4 (lower is better) Translates to: EVLLTLSQQRQSLCIPCSLLPGC*HAGHPQ Trigger: TTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAG...GGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGCTGGAGGGAAATGCTTaGCAGGTGGCTGGCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPLEGNA*QVAGSE Trigger: CTCCGAGCCAGCCACCTGCCAAGCATTTCCCTCCAG...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTGCAGAAGCTGCGCCTaGCCACCGTTGGACTGCTGG | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLCRSCA*PPLDCW Trigger: CCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCA...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGGCCACGCGGATGCAGTaGTGTTTCAGCTTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPATRMQ*CFSLQG Trigger: GCCCTGCAAGCTGAAACACCACTGCATCCGCGTGGC...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGAGGTCAGCCAGCAGCTaGAGGTGTCTGGGTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGRSASS*RCLGSF Trigger: AAAAGAACCCAGACACCTGCAGCTGCTGGCTGACCT...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGGTCAGCCAGCAGCTaGAGGTGTCTGGGTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVRSASS*RCLGSF Trigger: AAAAGAACCCAGACACCTGCAGCTGCTGGCTGACCT...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGATAAGGCCACGCGGATaGAGTGGTGTTTCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVIRPRG*SGVSAC Trigger: GCAAGCTGAAACACCACTGCATCCGCGTGGCCTTAT...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGGTTCCTGCAGAAGCTaGGCCTGGCCACCGTTGGAC | + |
Preference number: 4 (lower is better) Translates to: HVVLSPWVGVGVCSHPHAGSCRS*AWPPLD Trigger: GTCCAACGGTGGCCAGGCGCAGCTTCTGCAGGAACC...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS-3UTR GCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTAGGTGTCTGGGTTCCTaGAGAAGCTGCGCCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSRCLGS*RSCAWP Trigger: TGGCCAGGCGCAGCTTCTGCAGGAACCCAGACACCT...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS-3UTR GCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCAGGTCAGCCAGCAGCTaGAGGTGTCTGGGTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFRSASS*RCLGSC Trigger: GCAGGAACCCAGACACCTGCAGCTGCTGGCTGACCT...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGTGGTTGCTGGCATGCTaGCCATCCTCAAGAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVWLLAC*PSSRSG Trigger: ACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCA...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCAGCTTCTCCATCTGTaGAGTGGGCATCCGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVQLLHL*SGHPCH Trigger: GTGGCACGGATGCCCACTTCACAGATGGAGAAGCTG...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR GCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGAATGTGCACAGGCTaGGAGCGTTGCATTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVRMCTG*ERCIFC Trigger: GCAGAAAATGCAACGCTCGCAGCCTGTGCACATTCT...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGAATAGAGGCCAGATCTaGGCAGGCACACATACAGCT | + |
Preference number: 4 (lower is better) Translates to: RLADISLKLRSCSCAVLGNRGQI*AGTHTA Trigger: AGCTGTATGTGTGCCTGCGCAGATCTGGCCTCTATT...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGTTCAGGGTAGAAGGATaGAGTGGGCTTTGGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGFRVEG*SGLWLL Trigger: AAGCAGCCAAAGCCCACTGCATCCTTCTACCCTGAA...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCGCTCCGGAAATGGGTTaGGGATGGCCGGAAGAGATG | + |
Preference number: 4 (lower is better) Translates to: VLSPWVGVGVCSHPHADLAPEMG*GWPEEM Trigger: CATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGC...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGTGCTCTCACTTGGCATaGTACTCTCCACTTGGACCA | + |
Preference number: 4 (lower is better) Translates to: RLADISLKLRSCSCAVLGCSHLA*YSPLGP Trigger: TGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCA...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTTCCAGGGCAGCACTCTaGGCTTCAGCCGGGTTATCG | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSSRAAL*ASAGLS Trigger: CGATAACCCGGCTGAAGCCCAGAGTGCTGCCCTGGA...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGCCACGCGGATGCAGTaGTGTTTCAGCTTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: HVVLSPWVGVGVCSHPHAATRMQ*CFSLQG Trigger: GCCCTGCAAGCTGAAACACCACTGCATCCGCGTGGC...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCAGCTTCTCCATCTGTaGAGTGGGCATCCGTGCCAC | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSQLLHL*SGHPCH Trigger: GTGGCACGGATGCCCACTTCACAGATGGAGAAGCTG...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR GCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCCCTGGTTGCTGGCATaGTGGCCATCCTCAAGAAGT | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVPWLLA*WPSSRS Trigger: ACTTCTTGAGGATGGCCAGCATGCCAGCAACCAGGG...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | GAGGTACTTCTCACCCTAAGCCAGCAGAGGCAAAGCCTCTGCATACCCTGCTCCCCTACCTCTTTCACCTaGAAGAACCCCTGGATCTCA | + |
Preference number: 4 (lower is better) Translates to: EVLLTLSQQRQSLCIPCSPTSFT*KNPWIS Trigger: TGAGATCCAGGGGTTCTTGCAGGTGAAAGAGGTAGG...GGAGCAGGGTATGCAGAGGCTTTGCCTCTGCTGGCTTAGGGTGAGAAGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
CDS-3UTR GCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGTCAGGTAGAAGATGCTaGTTTCTTCCAGGTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVSGRRC*FLPGQP Trigger: TGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGA...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGAGTGGTGTTTCAGCTTaGAGGGCAGAACACCTTTGT | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGSGVSA*RAEHLC Trigger: ACAAAGGTGTTCTGCCCTGCAAGCTGAAACACCACT...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGATAAGGCCACGCGGATaGAGTGGTGTTTCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPIRPRG*SGVSAC Trigger: GCAAGCTGAAACACCACTGCATCCGCGTGGCCTTAT...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGGAAATGCTTGGCAGGTaGCTGGCTCGGAGGAGGAGG | + |
Preference number: 4 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTEMLGR*LARRRR Trigger: CCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATTTC...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCCTGGAGGGAAATGCTTaGCAGGTGGCTGGCTCGGAG | + |
Preference number: 4 (lower is better) Translates to: PIKKPCCSESLGGSRCVFLEGNA*QVAGSE Trigger: CTCCGAGCCAGCCACCTGCCAAGCATTTCCCTCCAG...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCCGACAGCTGAAAGCCTaGAGGGAAATGCTTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLRQLKA*REMLGR Trigger: CCTGCCAAGCATTTCCCTCCAGGCTTTCAGCTGTCG...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCGCTGGCACAGGTCCCTaGCTGTCATGTCGGTTAGAA | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFAGTGP*LSCRLE Trigger: TTCTAACCGACATGACAGCCAGGGACCTGTGCCAGC...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCTGGACCACGATCTCATaGTCCTCCAGGCACCTCTCT | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVWTTIS*SSRHLS Trigger: AGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCA...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCTGGACCACGATCTCATaGTCCTCCAGGCACCTCTCT | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFWTTIS*SSRHLS Trigger: AGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCA...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAACCTGCAAGAACCCCTaGATCTCAGGGCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: HVVLSPWVGVGVCSHPHATCKNP*ISGQLL Trigger: CAGCAGCTGCCCTGAGATCCAGGGGTTCTTGCAGGT...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGGCCACGCGGATGCAGTaGTGTTTCAGCTTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTATRMQ*CFSLQG Trigger: GCCCTGCAAGCTGAAACACCACTGCATCCGCGTGGC...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR CAA 72 bp | GGGCCACTGAAGTCTGCTACACTCAAGGTGGGTGGGTaGCAGCCTTCAACAATTCACTTCGGCAAGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: GPLKSATLKVGG*QPSTIHFGKGS Trigger: ACTTCCCTTGCCGAAGTGAATTGTTGAAGGCTGCAACCCACCCACCTTGAGTGTAGCAGACTTCAGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGTGCTGGTCTTCCTCCTaGAGGCGCCTGAGAATGTGC | + |
Preference number: 4 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTCWSSS*RRLRMC Trigger: GCACATTCTCAGGCGCCTTCAGGAGGAAGACCAGCA...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCGTGAGTTTCGACAGCTaGAAGCCTGGAGGGAAATGC | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLVSFDS*KPGGKC Trigger: GCATTTCCCTCCAGGCTTTCAGCTGTCGAAACTCAC...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR TCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTACTGCTGGCACCAATTaGCCATCTGATCCGGGAAGA | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSTAGTN*PSDPGR Trigger: TCTTCCCGGATCAGATGGTCAATTGGTGCCAGCAGT...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGAGAGTGAAGAAGGTCTaGCCATCATCCTCGCAAGGT | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPRVKKV*PSSSQG Trigger: ACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCT...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | GGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCTGAGAGTGAAGAAGGTCTaGCCATCATCCTCGCAAGGT | + |
Preference number: 4 (lower is better) Translates to: GSLPSPNFKWLTQREVVLRVKKV*PSSSQG Trigger: ACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCT...CAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTGGTTGCTGGCATGCTaGCCATCCTCAAGAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: VLSPWVGVGVCSHPHADLWLLAC*PSSRSG Trigger: ACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCA...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCTGGTTGCTGGCATGCTaGCCATCCTCAAGAAGTGGT | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVWLLAC*PSSRSG Trigger: ACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCA...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | AAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTGCTCCGGAAATGGGTTaGGGATGGCCGGAAGAGATG | + |
Preference number: 4 (lower is better) Translates to: KSHVVLSPWVGVGVCSHPAPEMG*GWPEEM Trigger: CATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGC...AGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCTCTCCATCTGTGAAGTaGGCATCCGTGCCACTGGAT | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVSPSVK*ASVPLD Trigger: ATCCAGTGGCACGGATGCCCACTTCACAGATGGAGA...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTGCTGGCACAGGTCCCTaGCTGTCATGTCGGTTAGAA | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSAGTGP*LSCRLE Trigger: TTCTAACCGACATGACAGCCAGGGACCTGTGCCAGC...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTGCTCTCACTTGGCATaGTACTCTCCACTTGGACCA | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPCSHLA*YSPLGP Trigger: TGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCA...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGGAATTTGCTCTCACTTaGCATGGTACTCTCCACTTG | + |
Preference number: 4 (lower is better) Translates to: CRSLFSVPVSLPPASVSGEFALT*HGTLHL Trigger: CAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTC...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGGCCTTTGGATTACTCTaGCTGTCACGAAGGAGGAAC | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPAFGLL*LSRRRN Trigger: GTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGC...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACAGGGGCCGCACCAGTaGGCTCCGGAAATGGGTTGG | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLQGPHQ*APEMGW Trigger: CCAACCCATTTCCGGAGCTCACTGGTGCGGCCCCTG...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTACTGCTGGCACCAATTaGCCATCTGATCCGGGAAGA | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSTAGTN*PSDPGR Trigger: TCTTCCCGGATCAGATGGTCAATTGGTGCCAGCAGT...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTCCTACCTCTTTCACCTaGAAGAACCCCTGGATCTCA | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSPTSFT*KNPWIS Trigger: TGAGATCCAGGGGTTCTTGCAGGTGAAAGAGGTAGG...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | GGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCTGTCAGGTAGAAGATGCTaGTTTCTTCCAGGTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: GSLPSPNFKWLTQREVVLSGRRC*FLPGQP Trigger: TGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGA...CAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTTCAGGGTAGAAGGATaGAGTGGGCTTTGGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: VLSPWVGVGVCSHPHADLFRVEG*SGLWLL Trigger: AAGCAGCCAAAGCCCACTGCATCCTTCTACCCTGAA...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGAAGACTTTGACATCATaGTTGGCAGGTGGCTGGCTC | + |
Preference number: 4 (lower is better) Translates to: LSTMANQKWLPGEHFNESKTLTS*LAGGWL Trigger: GAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTT...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | AAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTGCTGGCACAGGTCCCTaGCTGTCATGTCGGTTAGAA | + |
Preference number: 4 (lower is better) Translates to: KSHVVLSPWVGVGVCSHPAGTGP*LSCRLE Trigger: TTCTAACCGACATGACAGCCAGGGACCTGTGCCAGC...AGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTATGGTACTCTCCACTTaGACCACGATCTCATGGTCC | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSMVLST*TTISWS Trigger: GGACCATGAGATCGTGGTCCAAGTGGAGAGTACCAT...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTGCTCTCACTTGGCATaGTACTCTCCACTTGGACCA | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSCSHLA*YSPLGP Trigger: TGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCA...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCGCCTTTGGATTACTCTaGCTGTCACGAAGGAGGAAC | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLAFGLL*LSRRRN Trigger: GTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGC...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGCAGTACGAACGCCTTTaGATTACTCTGGCTGTCACG | + |
Preference number: 4 (lower is better) Translates to: LSTMANQKWLPGEHFNESQYERL*ITLAVT Trigger: CGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTG...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCAGTACGAACGCCTTTaGATTACTCTGGCTGTCACG | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVQYERL*ITLAVT Trigger: CGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTG...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CTGCATTCCCTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTTGCTGGTCTTCCTCCTaGAGGCGCCTGAGAATGTGC | + |
Preference number: 4 (lower is better) Translates to: LHSLKTVTCQVILPVTAVCWSSS*RRLRMC Trigger: GCACATTCTCAGGCGCCTTCAGGAGGAAGACCAGCA...AACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTCGCTTTGTTTGGCTTaGTGCACATCCCATGTTCAT | + |
Preference number: 4 (lower is better) Translates to: PWVGVGVCSHPHADLSSPSLCLA*CTSHVH Trigger: ATGAACATGGGATGTGCATCAAGCCAAACAAAGCGA...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCAGTGGTGTTTCAGCTTaGAGGGCAGAACACCTTTGT | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLSGVSA*RAEHLC Trigger: ACAAAGGTGTTCTGCCCTGCAAGCTGAAACACCACT...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTGCATTCCCTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTGCTCCGGAAATGGGTTaGGGATGGCCGGAAGAGATG | + |
Preference number: 4 (lower is better) Translates to: LHSLKTVTCQVILPVTAVAPEMG*GWPEEM Trigger: CATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGC...AACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTATGCAGAAGCTGCGCCTaGCCACCGTTGGACTGCTGG | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLCRSCA*PPLDCW Trigger: CCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCA...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTCTCAGGGCAGCTGCTaGTGTTCAGAAAATTCTGCA | + |
Preference number: 4 (lower is better) Translates to: SESLGGSRCVFSPSCRSLSQGSC*CSENSA Trigger: TGCAGAATTTTCTGAACACCAGCAGCTGCCCTGAGA...GAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
||
CDS-3UTR CCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGTCTCAGGGCAGCTGCTaGTGTTCAGAAAATTCTGCA | + |
Preference number: 4 (lower is better) Translates to: LSTMANQKWLPGEHFNESSQGSC*CSENSA Trigger: TGCAGAATTTTCTGAACACCAGCAGCTGCCCTGAGA...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCTTGAAGTCCCCTTGGTaGAGTAATAGAGGCCAGATC | + |
Preference number: 4 (lower is better) Translates to: TGSLPSPNFKWLTQREVVLKSPW*SNRGQI Trigger: GATCTGGCCTCTATTACTCCACCAAGGGGACTTCAA...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGTTGAAGTCCCCTTGGTaGAGTAATAGAGGCCAGATC | + |
Preference number: 4 (lower is better) Translates to: LSTMANQKWLPGEHFNESLKSPW*SNRGQI Trigger: GATCTGGCCTCTATTACTCCACCAAGGGGACTTCAA...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGCCTTTGGATTACTCTaGCTGTCACGAAGGAGGAAC | + |
Preference number: 4 (lower is better) Translates to: HVVLSPWVGVGVCSHPHAAFGLL*LSRRRN Trigger: GTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGC...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCTCAGATCGGAGAACTTaGTGTTCCCATCATCCAGAG | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFSDRRT*CSHHPE Trigger: CTCTGGATGATGGGAACACCAAGTTCTCCGATCTGA...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCGTGAGTTTCGACAGCTaGAAGCCTGGAGGGAAATGC | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFVSFDS*KPGGKC Trigger: GCATTTCCCTCCAGGCTTTCAGCTGTCGAAACTCAC...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093321.12 |
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CDS-3UTR GCA 90 bp | AAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTTTCAGGGTAGAAGGATaGAGTGGGCTTTGGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: KSHVVLSPWVGVGVCSHPFRVEG*SGLWLL Trigger: AAGCAGCCAAAGCCCACTGCATCCTTCTACCCTGAA...AGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGAGTCCTGTGAATCACTaGATTCAGGGTAGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: LSTMANQKWLPGEHFNESSPVNH*IQGRRM Trigger: CATCCTTCTACCCTGAATGCAGTGATTCACAGGACT...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCATGGTACTCTCCACTTaGACCACGATCTCATGGTCC | + |
Preference number: 4 (lower is better) Translates to: PIKKPCCSESLGGSRCVFMVLST*TTISWS Trigger: GGACCATGAGATCGTGGTCCAAGTGGAGAGTACCAT...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCGAATTTGCTCTCACTTaGCATGGTACTCTCCACTTG | + |
Preference number: 4 (lower is better) Translates to: WVGVGVCSHPHADLSSPFEFALT*HGTLHL Trigger: CAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTC...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGTCGCAAGGTAAGATCTaGAAGTTTTTAATCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: PSCRSLFSVPVSLPPASVSQGKI*KFLIFW Trigger: CCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGA...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR CAA 72 bp | TTGGTACCGATCAAAAAGCCATGTTGTTCTGAGTCCTaGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGC | + |
Preference number: 4 (lower is better) Translates to: LVPIKKPCCSES*GGSRCVFSPSC Trigger: GCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGGTACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR CAA 72 bp | TCTGTGAACTACAGTGTTTCTCTACTGTGGGCCAGCTaGCCACTGGCCTGCTTTACAAAGCGCTGTCATATC | + |
Preference number: 4 (lower is better) Translates to: SVNYSVSLLWAS*PLACFTKRCHI Trigger: GATATGACAGCGCTTTGTAAAGCAGGCCAGTGGCAAGCTGGCCCACAGTAGAGAAACACTGTAGTTCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCATCGCTTTGTTTGGCTTaGTGCACATCCCATGTTCAT | + |
Preference number: 4 (lower is better) Translates to: HVVLSPWVGVGVCSHPHASLCLA*CTSHVH Trigger: ATGAACATGGGATGTGCATCAAGCCAAACAAAGCGA...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTATCCTCAAGAAGTGGTaGAGTATCAGTATCAGACTG | + |
Preference number: 4 (lower is better) Translates to: LSPWVGVGVCSHPHADLSILKKW*SISIRL Trigger: CAGTCTGATACTGATACTGCACCACTTCTTGAGGAT...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCAGAATGTGCACAGGCTaGGAGCGTTGCATTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFRMCTG*ERCIFC Trigger: GCAGAAAATGCAACGCTCGCAGCCTGTGCACATTCT...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | ATCCTGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCGTGTTCAGAAAATTCTaGAGAAGCTGCGCCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: ILSATLMPDKSSRGQQRVVFRKF*RSCAWP Trigger: TGGCCAGGCGCAGCTTCTGCAGAATTTTCTGAACAC...GACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCAATCAGGTAGAAGATaGTGCTTTCTTCCAGGTCAG | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSQSGRR*CFLPGQ Trigger: CTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTG...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGCATTCCCTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTATAAGGCCACGCGGATaGAGTGGTGTTTCAGCTTGC | + |
Preference number: 4 (lower is better) Translates to: LHSLKTVTCQVILPVTAVIRPRG*SGVSAC Trigger: GCAAGCTGAAACACCACTGCATCCGCGTGGCCTTAT...AACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCATGGTACTCTCCACTTaGACCACGATCTCATGGTCC | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFMVLST*TTISWS Trigger: GGACCATGAGATCGTGGTCCAAGTGGAGAGTACCAT...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTCCAGGGCAGCACTCTaGGCTTCAGCCGGGTTATCG | + |
Preference number: 4 (lower is better) Translates to: SRFELSRLFQGKSSFPIISRAAL*ASAGLS Trigger: CGATAACCCGGCTGAAGCCCAGAGTGCTGCCCTGGA...AATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCGCTTTGTTTGGCTTaGTGCACATCCCATGTTCAT | + |
Preference number: 4 (lower is better) Translates to: PIKKPCCSESLGGSRCVFSLCLA*CTSHVH Trigger: ATGAACATGGGATGTGCATCAAGCCAAACAAAGCGA...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCAGTCCTGTGAATCACTaGATTCAGGGTAGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: PIKKPCCSESLGGSRCVFSPVNH*IQGRRM Trigger: CATCCTTCTACCCTGAATGCAGTGATTCACAGGACT...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | GGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCTGTCGCAAGGTAAGATCTaGAAGTTTTTAATCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: GSLPSPNFKWLTQREVVLSQGKI*KFLIFW Trigger: CCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGA...CAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | ATCCTGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCTCAGATCGGAGAACTTaGTGTTCCCATCATCCAGAG | + |
Preference number: 4 (lower is better) Translates to: ILSATLMPDKSSRGQQRVSDRRT*CSHHPE Trigger: CTCTGGATGATGGGAACACCAAGTTCTCCGATCTGA...GACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCTCAGATCGGAGAACTTaGTGTTCCCATCATCCAGAG | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFSDRRT*CSHHPE Trigger: CTCTGGATGATGGGAACACCAAGTTCTCCGATCTGA...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAACTGCTGGCACCAATTaGCCATCTGATCCGGGAAGA | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLTAGTN*PSDPGR Trigger: TCTTCCCGGATCAGATGGTCAATTGGTGCCAGCAGT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGTTTTTAATCTTCTGGTaGTGGCACAGTGTCAGTACG | + |
Preference number: 4 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTFLIFW*WHSVST Trigger: CGTACTGACACTGTGCCATCACCAGAAGATTAAAAA...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCATCCTCAAGAAGTGGTaGAGTATCAGTATCAGACTG | + |
Preference number: 4 (lower is better) Translates to: PIKKPCCSESLGGSRCVFILKKW*SISIRL Trigger: CAGTCTGATACTGATACTGCACCACTTCTTGAGGAT...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTGCATTCCCTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTTCAGGTAGAAGATGCTaGTTTCTTCCAGGTCAGCCA | + |
Preference number: 4 (lower is better) Translates to: LHSLKTVTCQVILPVTAVSGRRC*FLPGQP Trigger: TGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGA...AACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | ATCCTGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCAATCAGGTAGAAGATaGTGCTTTCTTCCAGGTCAG | + |
Preference number: 4 (lower is better) Translates to: ILSATLMPDKSSRGQQRVQSGRR*CFLPGQ Trigger: CTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTG...GACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCCAATCAGGTAGAAGATaGTGCTTTCTTCCAGGTCAG | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFQSGRR*CFLPGQ Trigger: CTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTG...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTCGACAGCTGAAAGCCTaGAGGGAAATGCTTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: RGLNCQGYSRARVHFQSFRQLKA*REMLGR Trigger: CCTGCCAAGCATTTCCCTCCAGGCTTTCAGCTGTCG...AAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TCGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTGGACCACGATCTCATaGTCCTCCAGGCACCTCTCT | + |
Preference number: 4 (lower is better) Translates to: SRFELSRLFQGKSSFPIIWTTIS*SSRHLS Trigger: AGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCA...AATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCGAATTTGCTCTCACTTaGCATGGTACTCTCCACTTG | + |
Preference number: 4 (lower is better) Translates to: CLLLSCLINHQGDNRGSFEFALT*HGTLHL Trigger: CAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTC...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCTGACCTTAAGTCAGCAAAAAGAAATGAGCACGGTAAAACTGAAATGTCTGTTTCCAGGGCAGCACTCTaGGCTTCAGCCGGGTTATCG | + |
Preference number: 4 (lower is better) Translates to: SDLKSAKRNEHGKTEMSVSRAAL*ASAGLS Trigger: CGATAACCCGGCTGAAGCCCAGAGTGCTGCCCTGGA...AACAGACATTTCAGTTTTACCGTGCTCATTTCTTTTTGCTGACTTAAGGTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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3UTR CAA 72 bp | GGGTGGTATCAAGAAAGGGAAATGTGTTCACCACCGTaGTTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTG | + |
Preference number: 4 (lower is better) Translates to: GWYQEREMCSPP*LSVCFSRQSCL Trigger: CAGACAGGATTGCCTTGAGAAACACACAGACAACAACGGTGGTGAACACATTTCCCTTTCTTGATACCACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATGCCTGATAAATAGAATGTGCACAGGCTaGGAGCGTTGCATTTTCTGC | + |
Preference number: 4 (lower is better) Translates to: LSVCFSRQSCLLLSCLINRMCTG*ERCIFC Trigger: GCAGAAAATGCAACGCTCGCAGCCTGTGCACATTCT...ATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAAGAGTGAAGAAGGTCTaGCCATCATCCTCGCAAGGT | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLRVKKV*PSSSQG Trigger: ACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTCTCCATCTGTGAAGTaGGCATCCGTGCCACTGGAT | + |
Preference number: 4 (lower is better) Translates to: SRFELSRLFQGKSSFPIISPSVK*ASVPLD Trigger: ATCCAGTGGCACGGATGCCCACTTCACAGATGGAGA...AATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CCA 90 bp | TCTGACCTTAAGTCAGCAAAAAGAAATGAGCACGGTAAAACTGAAATGTCTGTTACCTGCAAGAACCCCTaGATCTCAGGGCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: SDLKSAKRNEHGKTEMSVTCKNP*ISGQLL Trigger: CAGCAGCTGCCCTGAGATCCAGGGGTTCTTGCAGGT...AACAGACATTTCAGTTTTACCGTGCTCATTTCTTTTTGCTGACTTAAGGTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACAGTACGAACGCCTTTaGATTACTCTGGCTGTCACG | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLQYERL*ITLAVT Trigger: CGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTG...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTTCGCAAGGTAAGATCTaGAAGTTTTTAATCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: CSESLGGSRCVFSPSCRSSQGKI*KFLIFW Trigger: CCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGA...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TCTGACCTTAAGTCAGCAAAAAGAAATGAGCACGGTAAAACTGAAATGTCTGTTAAATTCTGCAGAAGCTaGGCCTGGCCACCGTTGGAC | + |
Preference number: 4 (lower is better) Translates to: SDLKSAKRNEHGKTEMSVKFCRS*AWPPLD Trigger: GTCCAACGGTGGCCAGGCGCAGCTTCTGCAGAATTT...AACAGACATTTCAGTTTTACCGTGCTCATTTCTTTTTGCTGACTTAAGGTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTGTGTTCAGAAAATTCTaGAGAAGCTGCGCCTGGCCA | + |
Preference number: 4 (lower is better) Translates to: RGLNCQGYSRARVHFQSFVFRKF*RSCAWP Trigger: TGGCCAGGCGCAGCTTCTGCAGAATTTTCTGAACAC...AAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAGCTTCTTCCAAGACTTaGGTCCTACCTCTTTCACCT | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLASSKT*VLPLSP Trigger: AGGTGAAAGAGGTAGGACGCAAGTCTTGGAAGAAGC...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTGCTTCTTCCAAGACTTaGGTCCTACCTCTTTCACCT | + |
Preference number: 4 (lower is better) Translates to: RGLNCQGYSRARVHFQSFASSKT*VLPLSP Trigger: AGGTGAAAGAGGTAGGACGCAAGTCTTGGAAGAAGC...AAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | TTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATGCCTGATAAATAGTCCTGTGAATCACTaGATTCAGGGTAGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: LSVCFSRQSCLLLSCLINSPVNH*IQGRRM Trigger: CATCCTTCTACCCTGAATGCAGTGATTCACAGGACT...ATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | TTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATGCCTGATAAATTTTTTAATCTTCTGGTaGTGGCACAGTGTCAGTACG | + |
Preference number: 4 (lower is better) Translates to: LSVCFSRQSCLLLSCLINFLIFW*WHSVST Trigger: CGTACTGACACTGTGCCATCACCAGAAGATTAAAAA...ATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAATCCTCAAGAAGTGGTaGAGTATCAGTATCAGACTG | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLILKKW*SISIRL Trigger: CAGTCTGATACTGATACTGCACCACTTCTTGAGGAT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTTTAATAGAGGCCAGATCTaGGCAGGCACACATACAGCT | + |
Preference number: 4 (lower is better) Translates to: RFELSRLFQGKSSFPIIFNRGQI*AGTHTA Trigger: AGCTGTATGTGTGCCTGCGCAGATCTGGCCTCTATT...AAAAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAGTCCAGAAAAATCCATaGCCACAAGAGAATTCTCAG | + |
Preference number: 4 (lower is better) Translates to: LQQFTSAREVQSSTSNQLVQKNP*PQENSQ Trigger: CTGAGAATTCTCTTGTGGCCATGGATTTTTCTGGAC...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR TCA 90 bp | CGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTTTTTTAATCTTCTGGTaGTGGCACAGTGTCAGTACG | + |
Preference number: 4 (lower is better) Translates to: RGLNCQGYSRARVHFQSFFLIFW*WHSVST Trigger: CGTACTGACACTGTGCCATCACCAGAAGATTAAAAA...AAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCG 41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR GCA 90 bp | CGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTTTAGTGGTGTTTCAGCTTaGAGGGCAGAACACCTTTGT | + |
Preference number: 4 (lower is better) Translates to: RFELSRLFQGKSSFPIIFSGVSA*RAEHLC Trigger: ACAAAGGTGTTCTGCCCTGCAAGCTGAAACACCACT...AAAAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | TCGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTGTCCAGAAAAATCCATaGCCACAAGAGAATTCTCAG | + |
Preference number: 4 (lower is better) Translates to: SRFELSRLFQGKSSFPIIVQKNP*PQENSQ Trigger: CTGAGAATTCTCTTGTGGCCATGGATTTTTCTGGAC...AATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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3UTR CAA 72 bp | ACCGGTCTGTGTAAACTGGAAAAAGAAACCCTAGGGTaGTTTGTTGTCTGTAAAAGTTCTGACCTTAAGTCA | + |
Preference number: 4 (lower is better) Translates to: TGLCKLEKETLG*FVVCKSSDLKS Trigger: TGACTTAAGGTCAGAACTTTTACAGACAACAAACAACCCTAGGGTTTCTTTTTCCAGTTTACACAGACCGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CCA 90 bp | CGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTTTGTCCAGAAAAATCCATaGCCACAAGAGAATTCTCAG | + |
Preference number: 4 (lower is better) Translates to: RFELSRLFQGKSSFPIIFVQKNP*PQENSQ Trigger: CTGAGAATTCTCTTGTGGCCATGGATTTTTCTGGAC...AAAAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 90 bp | CTGCTTTCTTCCAGGTCAGCCAGCAGCTGCAGGTGTCTGGGTTCCTaGAGAAGCTGCGCCTGGCCACCGTTGGACTGCTGGCACCAATTG | + |
Preference number: 5 (lower is better) Translates to: LLSSRSASSCRCLGS*RSCAWPPLDCWHQL Trigger: CAATTGGTGCCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCAGGAACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS CCA 90 bp | AGAAGATGCTGCTTTCTTCCAGGTCAGCCAGCAGCTGCAGGTGTCTaGGTTCCTGCAGAAGCTGCGCCTGGCCACCGTTGGACTGCTGGC | + |
Preference number: 5 (lower is better) Translates to: RRCCFLPGQPAAAGV*VPAEAAPGHRWTAG Trigger: GCCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCAGGAACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAGCATCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS-3UTR CAA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGCTGCGCATAGGTGCGTaGAAAGGAGGGGGCAGACCC | + |
Preference number: 5 (lower is better) Translates to: CRSLFSVPVSLPPASVSGLRIGA*KGGGRP Trigger: GGGTCTGCCCCCTCCTTTCAACGCACCTATGCGCAG...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGCACAGGCTGCGAGCGTaGCATTTTCTGCCTCGGGGA | + |
Preference number: 5 (lower is better) Translates to: RLADISLKLRSCSCAVLGHRLRA*HFLPRG Trigger: TCCCCGAGGCAGAAAATGCAACGCTCGCAGCCTGTG...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | GGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCCTGGATGCTGCTCCCTGGTaGCTGGCATGCTGGCCATCC | + |
Preference number: 5 (lower is better) Translates to: GSLPSPNFKWLTQREVVLDAAPW*LACWPS Trigger: GGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATC...CAGGACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCCCTGGAGGGAAATGCTaGGCAGGTGGCTGGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: VLSPWVGVGVCSHPHADLPGGKC*AGGWLG Trigger: TCCGAGCCAGCCACCTGCCAAGCATTTCCCTCCAGG...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS GCA 90 bp | GTCCTACCTCTTTCACCTGCAAGAACCCCTGGATCTCAGGGCAGCTaGTGGTGTTCAGAAAATTCTGCAGAAGCTGCGCCTGGCCACCGT | + |
Preference number: 5 (lower is better) Translates to: VLPLSPARTPGSQGS*WCSENSAEAAPGHR Trigger: ACGGTGGCCAGGCGCAGCTTCTGCAGAATTTTCTGAACACCAGCAGCTGCCCTGAGATCCAGGGGTTCTTGCAGGTGAAAGAGGTAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTGATGCTGCTCCCTGGTaGCTGGCATGCTGGCCATCC | + |
Preference number: 5 (lower is better) Translates to: CSESLGGSRCVFSPSCRSDAAPW*LACWPS Trigger: GGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATC...AGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGAGCTCCGGAAATGGGTaGGGGATGGCCGGAAGAGAT | + |
Preference number: 5 (lower is better) Translates to: PWVGVGVCSHPHADLSSPSSGNG*GMAGRD Trigger: ATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGCT...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 90 bp | GTCCCATCTTCACTAAAGACTTTGACATCATGCTTGGCAGGTGGCTaGCTCGGAGGAGGAGGTAAGGAGCTAGGAGCAACCGAAGGAGGG | + |
Preference number: 5 (lower is better) Translates to: VPSSLKTLTSCLAGG*LGGGGKELGATEGG Trigger: CCCTCCTTCGGTTGCTCCTAGCTCCTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTAGCTCCGGAAATGGGTaGGGGATGGCCGGAAGAGAT | + |
Preference number: 5 (lower is better) Translates to: LSPWVGVGVCSHPHADLSSSGNG*GMAGRD Trigger: ATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGCT...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | AAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCCTGGAGGGAAATGCTaGGCAGGTGGCTGGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: KSHVVLSPWVGVGVCSHPPGGKC*AGGWLG Trigger: TCCGAGCCAGCCACCTGCCAAGCATTTCCCTCCAGG...AGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CAA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGTCAGTACGAACGCCTTaGGATTACTCTGGCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: RLADISLKLRSCSCAVLGSVRTP*DYSGCH Trigger: GTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTGA...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS TCA 90 bp | CGCGGATGCAGTGGTGTTTCAGCTTGCAGGGCAGAACACCTTTGTTaGGCTGGTAGAAGTCGACCAGCTGGATCAGATCGGAGAACTTGG | + |
Preference number: 5 (lower is better) Translates to: RGCSGVSACRAEHLC*AGRSRPAGSDRRTW Trigger: CCAAGTTCTCCGATCTGATCCAGCTGGTCGACTTCTACCAGCTCAACAAAGGTGTTCTGCCCTGCAAGCTGAAACACCACTGCATCCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 90 bp | CCGTACTTGAGCAGTCTGAAGGCAGTCATCCAGCAAGTACGGATCTaGTCATCTTCGGCACAGAGCAGACGAAGCTCCTTCATCTCGGTC | + |
Preference number: 5 (lower is better) Translates to: PYLSSLKAVIQQVRI*SSSAQSRRSSFISV Trigger: GACCGAGATGAAGGAGCTTCGTCTGCTCTGTGCCGAAGATGAGCAGATCCGTACTTGCTGGATGACTGCCTTCAGACTGCTCAAGTACGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 90 bp | TCGGCGCGTTGTACTGCTTCTTTCCAGCAATCAGGTAGAAGATGCTaGTTTCTTCCAGGTCAGCCAGCAGCTGCAGGTGTCTGGGTTCCT | + |
Preference number: 5 (lower is better) Translates to: SARCTASFQQSGRRC*FLPGQPAAAGVWVP Trigger: AGGAACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTGCTGGAAAGAAGCAGTACAACGCGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS CCA 90 bp | TTGCTCTCACTTGGCATGGTACTCTCCACTTGGACCACGATCTCATaGTCCTCCAGGCACCTCTCTAATCCCAGTTGTGGGTGGTGTTCC | + |
Preference number: 5 (lower is better) Translates to: LLSLGMVLSTWTTIS*SSRHLSNPSCGWCS Trigger: GGAACACCACCCACAACTGGGATTAGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 90 bp | ACTGCGCATAGGTGCGTTGAAAGGAGGGGGCAGACCCTTCCTCTGTaGGATGCGATAGTTTTGGTACAGGAGCATTCCGTACTTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: TAHRCVERRGQTLPL*DAIVLVQEHSVLEQ Trigger: CTGCTCAAGTACGGAATGCTCCTGTACCAAAACTATCGCATCCCACAGAGGAAGGGTCTGCCCCCTCCTTTCAACGCACCTATGCGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | AGGCTGGCTGACATCAGTCTGAAGCTGAGGTCATGCAGCTGTGCTGTGCTGGGGAGAATCTCCACCACTTaGCTGGTCCCATCTTCACTA | + |
Preference number: 5 (lower is better) Translates to: RLADISLKLRSCSCAVLGRISTT*LVPSSL Trigger: TAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCT...CCCCAGCACAGCACAGCTGCATGACCTCAGCTTCAGACTGATGTCAGCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCCCCGTCCACGAGACCTaGTTGCTTGATGATCCTGTG | + |
Preference number: 5 (lower is better) Translates to: VLSPWVGVGVCSHPHADLPVHET*LLDDPV Trigger: CACAGGATCATCAAGCAACAAGGTCTCGTGGACGGG...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCCCCGTCCACGAGACCTaGTTGCTTGATGATCCTGTG | + |
Preference number: 5 (lower is better) Translates to: WVGVGVCSHPHADLSSPFPVHET*LLDDPV Trigger: CACAGGATCATCAAGCAACAAGGTCTCGTGGACGGG...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 90 bp | TCGGCGCGTTGTACTGCTTCTTTCCAGCAATCAGGTAGAAGATGCTaGTTTCTTCCAGGTCAGCCAGCAGCTGCAGGTGTCTGGGTTCTT | + |
Preference number: 5 (lower is better) Translates to: SARCTASFQQSGRRC*FLPGQPAAAGVWVL Trigger: AAGAACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTGCTGGAAAGAAGCAGTACAACGCGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS GCA 90 bp | CATTCGGCGCGTTGTACTGCTTCTTTCCAGCAATCAGGTAGAAGATaGTGCTTTCTTCCAGGTCAGCCAGCAGCTGCAGGTGTCTGGGTT | + |
Preference number: 5 (lower is better) Translates to: HSARCTASFQQSGRR*CFLPGQPAAAGVWV Trigger: AACCCAGACACCTGCAGCTGCTGGCTGACCTGGAAGAAAGCAGCATCTTCTACCTGATTGCTGGAAAGAAGCAGTACAACGCGCCGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 90 bp | TCCACCACTTTGCTGGTCCCATCTTCACTAAAGACTTTGACATCATaGTTGGCAGGTGGCTGGCTCGGAGGAGGAGGTAAGGAGCTAGGA | + |
Preference number: 5 (lower is better) Translates to: STTLLVPSSLKTLTS*LAGGWLGGGGKELG Trigger: TCCTAGCTCCTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGAGTGGGGTATCAGACTGCATGTaGCAAGCTGAGTTAAGGCTT | + |
Preference number: 5 (lower is better) Translates to: CRSLFSVPVSLPPASVSGVSDCM*QAELRL Trigger: AAGCCTTAACTCAGCTTGCAACATGCAGTCTGATAC...CCCACTCACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTCATGGTACTCTCCACTaGGACCACGATCTCATGGTC | + |
Preference number: 5 (lower is better) Translates to: LSPWVGVGVCSHPHADLSHGTLH*DHDLMV Trigger: GACCATGAGATCGTGGTCCAAGTGGAGAGTACCATG...AGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGCATGGTACTCTCCACTaGGACCACGATCTCATGGTC | + |
Preference number: 5 (lower is better) Translates to: LSTMANQKWLPGEHFNESHGTLH*DHDLMV Trigger: GACCATGAGATCGTGGTCCAAGTGGAGAGTACCATG...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCACCCGTCCACGAGACCTaGTTGCTTGATGATCCTGTG | + |
Preference number: 5 (lower is better) Translates to: HVVLSPWVGVGVCSHPHAPVHET*LLDDPV Trigger: CACAGGATCATCAAGCAACAAGGTCTCGTGGACGGG...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAACTTTGACATCATGCTaGGCAGGTGGCTGGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: HVVLSPWVGVGVCSHPHATLTSC*AGGWLG Trigger: TCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGT...TGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS CCA 90 bp | CATCCACACAGTGACTTTTGTAAACCAGCAGCTGGCACAGGTCCCTaGCTGTCATGTCGGTTAGAATCTCCACCACTTTGCTGGTCCCAT | + |
Preference number: 5 (lower is better) Translates to: HPHSDFCKPAAGTGP*LSCRLESPPLCWSH Trigger: ATGGGACCAGCAAAGTGGTGGAGATTCTAACCGACATGACAGCCAGGGACCTGTGCCAGCTGCTGGTTTACAAAAGTCACTGTGTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTGCATTCCCTGAAAACGGTTACATGTCAGGTCATTTTACCGGTCACTGCAGTTCACAGGCTGCGAGCGTaGCATTTTCTGCCTCGGGGA | + |
Preference number: 5 (lower is better) Translates to: LHSLKTVTCQVILPVTAVHRLRA*HFLPRG Trigger: TCCCCGAGGCAGAAAATGCAACGCTCGCAGCCTGTG...AACTGCAGTGACCGGTAAAATGACCTGACATGTAACCGTTTTCAGGGAATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CCCTCATGCAGATCTCTCTTCTCCGTTCCAGTGTCGCTGCCTCCAGCCTCTGTGTCTTCACTAAAGACTTaGACATCCTTTCTGAGCCTC | + |
Preference number: 5 (lower is better) Translates to: PSCRSLFSVPVSLPPASVSSLKT*TSFLSL Trigger: GAGGCTCAGAAAGGATGTCAAAGTCTTTAGTGAAGA...CACAGAGGCTGGAGGCAGCGACACTGGAACGGAGAAGAGAGATCTGCATGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CAA 90 bp | TGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGTTCGTCCACGAGACCTTGTaGCTTGATGATCCTGTGAGA | + |
Preference number: 5 (lower is better) Translates to: WVGVGVCSHPHADLSSPFVHETL*LDDPVR Trigger: TCTCACAGGATCATCAAGCAACAAGGTCTCGTGGAC...GAACGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTGTCAACCATGGCAAATCAGAAGTGGCTCCCTGGGGAGCACTTCAATGAGTCGGTCCACGAGACCTTGTaGCTTGATGATCCTGTGAGA | + |
Preference number: 5 (lower is better) Translates to: LSTMANQKWLPGEHFNESVHETL*LDDPVR Trigger: TCTCACAGGATCATCAAGCAACAAGGTCTCGTGGAC...CGACTCATTGAAGTGCTCCCCAGGGAGCCACTTCTGATTTGCCATGGTTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS TCA 90 bp | CCAGCTGGATCAGATCGGAGAACTTGGTGTTCCCATCATCCAGAGTaGAGAAGGTCTGCCCATCATCCTCGCAAGGTAAGATCTGGAAGT | + |
Preference number: 5 (lower is better) Translates to: PAGSDRRTWCSHHPE*RRSAHHPRKVRSGS Trigger: ACTTCCAGATCTTACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCTGGATGATGGGAACACCAAGTTCTCCGATCTGATCCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | ACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGCAGAGGGAGGTGGTCAGAATCTCCACCACTTaGCTGGTCCCATCTTCACTA | + |
Preference number: 5 (lower is better) Translates to: TGSLPSPNFKWLTQREVVRISTT*LVPSSL Trigger: TAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCT...GACCACCTCCCTCTGCGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCTCTTCTCCGAGAATTTGCTCTCACTaGGCATGGTACTCTCCACTT | + |
Preference number: 5 (lower is better) Translates to: PWVGVGVCSHPHADLSSPRICSH*AWYSPL Trigger: AAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCT...CGGAGAAGAGAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TTGTCTGTGTGTTTCTCAAGGCAATCCTGTCTGCTACTCTCATGCCTGATAAATCTGCGCATAGGTGCGTaGAAAGGAGGGGGCAGACCC | + |
Preference number: 5 (lower is better) Translates to: LSVCFSRQSCLLLSCLINLRIGA*KGGGRP Trigger: GGGTCTGCCCCCTCCTTTCAACGCACCTATGCGCAG...ATTTATCAGGCATGAGAGTAGCAGACAGGATTGCCTTGAGAAACACACAGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | GTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTCATGCAGATCTCGTATCAGACTGCATGTaGCAAGCTGAGTTAAGGCTT | + |
Preference number: 5 (lower is better) Translates to: VLSPWVGVGVCSHPHADLVSDCM*QAELRL Trigger: AAGCCTTAACTCAGCTTGCAACATGCAGTCTGATAC...GAGATCTGCATGAGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TGTCTGCTACTCTCATGCCTGATAAATCATCAAGGGGACAACAGAGGGTCCTTCCATGGTACTCTCCACTaGGACCACGATCTCATGGTC | + |
Preference number: 5 (lower is better) Translates to: CLLLSCLINHQGDNRGSFHGTLH*DHDLMV Trigger: GACCATGAGATCGTGGTCCAAGTGGAGAGTACCATG...GAAGGACCCTCTGTTGTCCCCTTGATGATTTATCAGGCATGAGAGTAGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CCGATCAAAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCAGTACGAACGCCTTaGGATTACTCTGGCTGTCAC | + |
Preference number: 5 (lower is better) Translates to: PIKKPCCSESLGGSRCVFSVRTP*DYSGCH Trigger: GTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTGA...GAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTTTGATCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | AACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTACGTAAGCTCCGGAAATGGGTaGGGGATGGCCGGAAGAGAT | + |
Preference number: 5 (lower is better) Translates to: NNSLRQGKYKVLRQTSYVSSGNG*GMAGRD Trigger: ATCTCTTCCGGCCATCCCCAACCCATTTCCGGAGCT...TACGTAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS CCA 90 bp | TTTCTGAATAAGAATTTGCTCTCACTTGGCATGGTACTCTCCACTTaGACCACGATCTCATGGTCCTCCAGGCACCTCTCTAATCCCAGT | + |
Preference number: 5 (lower is better) Translates to: FLNKNLLSLGMVLST*TTISWSSRHLSNPS Trigger: ACTGGGATTAGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCTTATTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGGTATCAGACTGCATGTaGCAAGCTGAGTTAAGGCTT | + |
Preference number: 5 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTVSDCM*QAELRL Trigger: AAGCCTTAACTCAGCTTGCAACATGCAGTCTGATAC...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | AAAAGCCATGTTGTTCTGAGTCCTTGGGTGGGAGTAGGTGTGTGTTCTCACCCTAGAATTTGCTCTCACTaGGCATGGTACTCTCCACTT | + |
Preference number: 5 (lower is better) Translates to: KSHVVLSPWVGVGVCSHPRICSH*AWYSPL Trigger: AAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCT...AGGGTGAGAACACACACCTACTCCCACCCAAGGACTCAGAACAACATGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS TCA 90 bp | CCATCATCCTCGCAAGGTAAGATCTGGAAGTTTTTAATCTTCTGGTaGTGGCACAGTGTCAGTACGAACGCCTTTGGATTACTCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: PSSSQGKIWKFLIFW*WHSVSTNAFGLLWL Trigger: CAGCCAGAGTAATCCAAAGGCGTTCGTACTGACACTGTGCCATCACCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGAGGATGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTTTCACAGGCTGCGAGCGTaGCATTTTCTGCCTCGGGGA | + |
Preference number: 5 (lower is better) Translates to: RFELSRLFQGKSSFPIIFHRLRA*HFLPRG Trigger: TCCCCGAGGCAGAAAATGCAACGCTCGCAGCCTGTG...AAAAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGTCTTCACTAAAGACTTaGACATCCTTTCTGAGCCTC | + |
Preference number: 5 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTSSLKT*TSFLSL Trigger: GAGGCTCAGAAAGGATGTCAAAGTCTTTAGTGAAGA...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS-3UTR CAA 90 bp | TCTTCCCACACTTGCACTGGATCTCTTCCCTCCCCCAATTTTAAATGGCTGACGTCTTCACTAAAGACTTaGACATCATGCTTGGCAGGT | + |
Preference number: 5 (lower is better) Translates to: SSHTCTGSLPSPNFKWLTSSLKT*TSCLAG Trigger: ACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGA...CGTCAGCCATTTAAAATTGGGGGAGGGAAGAGATCCAGTGCAAGTGTGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAGTCCACGAGACCTTGTaGCTTGATGATCCTGTGAGA | + |
Preference number: 5 (lower is better) Translates to: LQQFTSAREVQSSTSNQLVHETL*LDDPVR Trigger: TCTCACAGGATCATCAAGCAACAAGGTCTCGTGGAC...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CGCGGTTTGAATTGTCAAGGTTATTCCAGGGCAAGAGTTCATTTCCAATCATTTAGAATCTCCACCACTTaGCTGGTCCCATCTTCACTA | + |
Preference number: 5 (lower is better) Translates to: RGLNCQGYSRARVHFQSFRISTT*LVPSSL Trigger: TAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCT...AAATGATTGGAAATGAACTCTTGCCCTGGAATAACCTTGACAATTCAAACCGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS-3UTR CAA 90 bp | CTTCAACAATTCACTTCGGCAAGGGAAGTACAAAGTTCTACGTCAAACCAGCTAAGAATTTGCTCTCACTaGGCATGGTACTCTCCACTT | + |
Preference number: 5 (lower is better) Translates to: LQQFTSAREVQSSTSNQLRICSH*AWYSPL Trigger: AAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCT...TAGCTGGTTTGACGTAGAACTTTGTACTTCCCTTGCCGAAGTGAATTGTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS GCA 72 bp | CCTCGGGGACGCCTGTGGCTGTCCCCGGGAGCTAGATaGTGCTCCCTGGTTGCTGGCATGCTGGCCATCCTC | + |
Preference number: 6 (lower is better) Translates to: PRGRLWLSPGAR*CSLVAGMLAIL Trigger: GAGGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATCTAGCTCCCGGGGACAGCCACAGGCGTCCCCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 ENSMUST00000143386.8 ENSMUST00000143915.2 ENSMUST00000150972.8 |
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CDS GCA 72 bp | CGGGGACGCCTGTGGCTGTCCCCGGGAGCTAGATGCTaGTCCCTGGTTGCTGGCATGCTGGCCATCCTCAAG | + |
Preference number: 6 (lower is better) Translates to: RGRLWLSPGARC*SLVAGMLAILK Trigger: CTTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATCTAGCTCCCGGGGACAGCCACAGGCGTCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 ENSMUST00000143386.8 ENSMUST00000143915.2 ENSMUST00000150972.8 |
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CDS CCA 72 bp | CAGACCTGGACGGGTGAGTTTCGACAGCTGAAAGCCTaGAGGGAAATGCTTGGCAGGTGGCTGGCTCGGAGG | + |
Preference number: 6 (lower is better) Translates to: QTWTGEFRQLKA*REMLGRWLARR Trigger: CCTCCGAGCCAGCCACCTGCCAAGCATTTCCCTCCAGGCTTTCAGCTGTCGAAACTCACCCGTCCAGGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000143386.8 |
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CDS CCA 72 bp | AGCTGCAGGTGTCTGGGTTCCTGCAGAAGCTGCGCCTaGCCACCGTTGGACTGCTGGCACCAATTGACCATC | + |
Preference number: 6 (lower is better) Translates to: SCRCLGSCRSCA*PPLDCWHQLTI Trigger: GATGGTCAATTGGTGCCAGCAGTCCAACGGTGGCCAGGCGCAGCTTCTGCAGGAACCCAGACACCTGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109653.8 |
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CDS CAA 72 bp | TGTGGCTGTCCCCGGGAGCTAGATGCTGCTCCCTGGTaGCTGGCATGCTGGCCATCCTCAAGAAGTGGTGCA | + |
Preference number: 6 (lower is better) Translates to: CGCPRELDAAPW*LACWPSSRSGA Trigger: TGCACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATCTAGCTCCCGGGGACAGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 ENSMUST00000143386.8 ENSMUST00000143915.2 ENSMUST00000150972.8 |
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CDS GCA 72 bp | GCAGTGGGCTTTGGCTGCTTAGGATATTCATCCGTGTaGTCCGCTTACGCCAGGCATGGCCCTCTTCCAGGG | + |
Preference number: 6 (lower is better) Translates to: AVGFGCLGYSSV*SAYARHGPLPG Trigger: CCCTGGAAGAGGGCCATGCCTGGCGTAAGCGGAGCACACGGATGAATATCCTAAGCAGCCAAAGCCCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | TTACGCCAGGCATGGCCCTCTTCCAGGGCAGCACTCTaGGCTTCAGCCGGGTTATCGATCACTCTTCCGATT | + |
Preference number: 6 (lower is better) Translates to: LRQAWPSSRAAL*ASAGLSITLPI Trigger: AATCGGAAGAGTGATCGATAACCCGGCTGAAGCCCAGAGTGCTGCCCTGGAAGAGGGCCATGCCTGGCGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CAA 72 bp | GCTGTCACGAAGGAGGAACAGCCCGTCCACGAGACCTaGTTGCTTGATGATCCTGTGAGACTCCTCGCGGGA | + |
Preference number: 6 (lower is better) Translates to: AVTKEEQPVHET*LLDDPVRLLAG Trigger: TCCCGCGAGGAGTCTCACAGGATCATCAAGCAACAAGGTCTCGTGGACGGGCTGTTCCTCCTTCGTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS TCA 72 bp | TTTGTCCACAGACCTGGACGGGTGAGTTTCGACAGCTaGAAGCCTGGAGGGAAATGCTTGGCAGGTGGCTGG | + |
Preference number: 6 (lower is better) Translates to: FVHRPGRVSFDS*KPGGKCLAGGW Trigger: CCAGCCACCTGCCAAGCATTTCCCTCCAGGCTTTCAGCTGTCGAAACTCACCCGTCCAGGTCTGTGGACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000143386.8 |
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CDS CAA 72 bp | GTCACGAAGGAGGAACAGCCCGTCCACGAGACCTTGTaGCTTGATGATCCTGTGAGACTCCTCGCGGGAGAT | + |
Preference number: 6 (lower is better) Translates to: VTKEEQPVHETL*LDDPVRLLAGD Trigger: ATCTCCCGCGAGGAGTCTCACAGGATCATCAAGCAACAAGGTCTCGTGGACGGGCTGTTCCTCCTTCGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS GCA 72 bp | AGCTTCTTCCAAGACTTGCGTCCTACCTCTTTCACCTaGAAGAACCCCTGGATCTCAGGGCAGCTGCTGGTG | + |
Preference number: 6 (lower is better) Translates to: SFFQDLRPTSFT*KNPWISGQLLV Trigger: CACCAGCAGCTGCCCTGAGATCCAGGGGTTCTTGCAGGTGAAAGAGGTAGGACGCAAGTCTTGGAAGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS GCA 72 bp | GGCCACAAGAGAATTCTCAGAAACACTGCGCATAGGTaGGTTGAAAGGAGGGGGCAGACCCTTCCTCTGTGG | + |
Preference number: 6 (lower is better) Translates to: GHKRILRNTAHR*VERRGQTLPLW Trigger: CCACAGAGGAAGGGTCTGCCCCCTCCTTTCAACGCACCTATGCGCAGTGTTTCTGAGAATTCTCTTGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | CGGGAGCTAGATGCTGCTCCCTGGTTGCTGGCATGCTaGCCATCCTCAAGAAGTGGTGCAGTATCAGTATCA | + |
Preference number: 6 (lower is better) Translates to: RELDAAPWLLAC*PSSRSGAVSVS Trigger: TGATACTGATACTGCACCACTTCTTGAGGATGGCCAGCATGCCAGCAACCAGGGAGCAGCATCTAGCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 ENSMUST00000143386.8 ENSMUST00000143915.2 ENSMUST00000150972.8 |
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CDS CCA 72 bp | TGGTCCTCCAGGCACCTCTCTAATCCCAGTTGTGGGTaGTGTTCCACCAGAGTCCAGCTGTTGTCATCCACA | + |
Preference number: 6 (lower is better) Translates to: WSSRHLSNPSCG*CSTRVQLLSST Trigger: TGTGGATGACAACAGCTGGACTCTGGTGGAACACCACCCACAACTGGGATTAGAGAGGTGCCTGGAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | TGGCACAGTGTCAGTACGAACGCCTTTGGATTACTCTaGCTGTCACGAAGGAGGAACAGCCCGTCCACGAGA | + |
Preference number: 6 (lower is better) Translates to: WHSVSTNAFGLL*LSRRRNSPSTR Trigger: TCTCGTGGACGGGCTGTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTGACACTGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS TCA 72 bp | ATCTCGCAGTGGTCTTTGTCCACAGACCTGGACGGGTaGGTTTCGACAGCTGAAAGCCTGGAGGGAAATGCT | + |
Preference number: 6 (lower is better) Translates to: ISQWSLSTDLDG*VSTAESLEGNA Trigger: AGCATTTCCCTCCAGGCTTTCAGCTGTCGAAACTCACCCGTCCAGGTCTGTGGACAAAGACCACTGCGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000143386.8 |
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CDS GCA 72 bp | AGCAGTCTGAAGGCAGTCATCCAGCAAGTACGGATCTaGTCATCTTCGGCACAGAGCAGACGAAGCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: SSLKAVIQQVRI*SSSAQSRRSSF Trigger: GAAGGAGCTTCGTCTGCTCTGTGCCGAAGATGAGCAGATCCGTACTTGCTGGATGACTGCCTTCAGACTGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | AGGTGCGTTGAAAGGAGGGGGCAGACCCTTCCTCTGTaGGATGCGATAGTTTTGGTACAGGAGCATTCCGTA | + |
Preference number: 6 (lower is better) Translates to: RCVERRGQTLPL*DAIVLVQEHSV Trigger: TACGGAATGCTCCTGTACCAAAACTATCGCATCCCACAGAGGAAGGGTCTGCCCCCTCCTTTCAACGCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | CTTCTGGTGATGGCACAGTGTCAGTACGAACGCCTTTaGATTACTCTGGCTGTCACGAAGGAGGAACAGCCC | + |
Preference number: 6 (lower is better) Translates to: LLVMAQCQYERL*ITLAVTKEEQP Trigger: GGGCTGTTCCTCCTTCGTGACAGCCAGAGTAATCCAAAGGCGTTCGTACTGACACTGTGCCATCACCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | TCACTAAAGACTTTGACATCATGCTTGGCAGGTGGCTaGCTCGGAGGAGGAGGTAAGGAGCTAGGAGCAACC | + |
Preference number: 6 (lower is better) Translates to: SLKTLTSCLAGG*LGGGGKELGAT Trigger: GGTTGCTCCTAGCTCCTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS CAA 72 bp | GATCTGCGCAGGCACACATACAGCTTCTTCCAAGACTaGCGTCCTACCTCTTTCACCTGCAAGAACCCCTGG | + |
Preference number: 6 (lower is better) Translates to: DLRRHTYSFFQD*RPTSFTCKNPW Trigger: CCAGGGGTTCTTGCAGGTGAAAGAGGTAGGACGCAAGTCTTGGAAGAAGCTGTATGTGTGCCTGCGCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS CAA 90 bp | ACCACTTTGCTGGTCCCATCTTCACTAAAGACTTTGACATCATGCTaGGCAGGTGGCTGGCTCGGAGGAGGAGGTAAGGAGCTAGGAGCA | + |
Preference number: 6 (lower is better) Translates to: TTLLVPSSLKTLTSC*AGGWLGGGGKELGA Trigger: TGCTCCTAGCTCCTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS TCA 72 bp | CAGTTCTTAACTGCTGGTCTTCCTCCTGAAGGCGCCTaGGAATGTGCACAGGCTGCGAGCGTTGCATTTTCT | + |
Preference number: 6 (lower is better) Translates to: QFLTAGLPPEGA*ECAQAASVAFS Trigger: AGAAAATGCAACGCTCGCAGCCTGTGCACATTCTCAGGCGCCTTCAGGAGGAAGACCAGCAGTTAAGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 ENSMUST00000143386.8 ENSMUST00000143915.2 ENSMUST00000150972.8 |
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CDS GCA 72 bp | ATCTGCGCAGGCACACATACAGCTTCTTCCAAGACTTaGGTCCTACCTCTTTCACCTGCAAGAACCCCTGGA | + |
Preference number: 6 (lower is better) Translates to: ICAGTHTASSKT*VLPLSPARTPG Trigger: TCCAGGGGTTCTTGCAGGTGAAAGAGGTAGGACGCAAGTCTTGGAAGAAGCTGTATGTGTGCCTGCGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109654.8 |
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CDS GCA 72 bp | TTGCTGGTCCCATCTTCACTAAAGACTTTGACATCATaGTTGGCAGGTGGCTGGCTCGGAGGAGGAGGTAAG | + |
Preference number: 6 (lower is better) Translates to: LLVPSSLKTLTS*LAGGWLGGGGK Trigger: CTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS CAA 72 bp | ACAAGAGAATTCTCAGAAACACTGCGCATAGGTGCGTaGAAAGGAGGGGGCAGACCCTTCCTCTGTGGGATG | + |
Preference number: 6 (lower is better) Translates to: TREFSETLRIGA*KGGGRPFLCGM Trigger: CATCCCACAGAGGAAGGGTCTGCCCCCTCCTTTCAACGCACCTATGCGCAGTGTTTCTGAGAATTCTCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CAA 90 bp | GTTAGAATCTCCACCACTTTGCTGGTCCCATCTTCACTAAAGACTTaGACATCATGCTTGGCAGGTGGCTGGCTCGGAGGAGGAGGTAAG | + |
Preference number: 6 (lower is better) Translates to: VRISTTLLVPSSLKT*TSCLAGGWLGGGGK Trigger: CTTACCTCCTCCTCCGAGCCAGCCACCTGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS GCA 72 bp | ACGTCCATGGAACCAATGCTGAGTCCTGTGAATCACTaGATTCAGGGTAGAAGGATGCAGTGGGCTTTGGCT | + |
Preference number: 6 (lower is better) Translates to: TSMEPMLSPVNH*IQGRRMQWALA Trigger: AGCCAAAGCCCACTGCATCCTTCTACCCTGAATGCAGTGATTCACAGGACTCAGCATTGGTTCCATGGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | AGTGACTTTTGTAAACCAGCAGCTGGCACAGGTCCCTaGCTGTCATGTCGGTTAGAATCTCCACCACTTTGC | + |
Preference number: 6 (lower is better) Translates to: SDFCKPAAGTGP*LSCRLESPPLC Trigger: GCAAAGTGGTGGAGATTCTAACCGACATGACAGCCAGGGACCTGTGCCAGCTGCTGGTTTACAAAAGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | AAGAATTTGCTCTCACTTGGCATGGTACTCTCCACTTaGACCACGATCTCATGGTCCTCCAGGCACCTCTCT | + |
Preference number: 6 (lower is better) Translates to: KNLLSLGMVLST*TTISWSSRHLS Trigger: AGAGAGGTGCCTGGAGGACCATGAGATCGTGGTCCAAGTGGAGAGTACCATGCCAAGTGAGAGCAAATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CAA 90 bp | TGGCACAGGTCCCTGGCTGTCATGTCGGTTAGAATCTCCACCACTTaGCTGGTCCCATCTTCACTAAAGACTTTGACATCCTTTCTGAGC | + |
Preference number: 6 (lower is better) Translates to: WHRSLAVMSVRISTT*LVPSSLKTLTSFLS Trigger: GCTCAGAAAGGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCTAACCGACATGACAGCCAGGGACCTGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 |
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CDS CAA 90 bp | TGGCACAGGTCCCTGGCTGTCATGTCGGTTAGAATCTCCACCACTTaGCTGGTCCCATCTTCACTAAAGACTTTGACATCATGCTTGGCA | + |
Preference number: 6 (lower is better) Translates to: WHRSLAVMSVRISTT*LVPSSLKTLTSCLA Trigger: TGCCAAGCATGATGTCAAAGTCTTTAGTGAAGATGGGACCAGCAAAGTGGTGGAGATTCTAACCGACATGACAGCCAGGGACCTGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109654.8 |
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CDS TCA 72 bp | TCAGATCGGAGAACTTGGTGTTCCCATCATCCAGAGTaGAGAAGGTCTGCCCATCATCCTCGCAAGGTAAGA | + |
Preference number: 6 (lower is better) Translates to: SDRRTWCSHHPE*RRSAHHPRKVR Trigger: TCTTACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCTGGATGATGGGAACACCAAGTTCTCCGATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | ATCACTGCATTCAGGGTAGAAGGATGCAGTGGGCTTTaGCTGCTTAGGATATTCATCCGTGTGCTCCGCTTA | + |
Preference number: 6 (lower is better) Translates to: ITAFRVEGCSGL*LLRIFIRVLRL Trigger: TAAGCGGAGCACACGGATGAATATCCTAAGCAGCCAAAGCCCACTGCATCCTTCTACCCTGAATGCAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CAA 90 bp | GGCAGCACTCTGGGCTTCAGCCGGGTTATCGATCACTCTTCCGATTaGTCCAGAAAAATCCATGGCCACAAGAGAATTCTCAGAAACACT | + |
Preference number: 6 (lower is better) Translates to: GSTLGFSRVIDHSSD*SRKIHGHKRILRNT Trigger: AGTGTTTCTGAGAATTCTCTTGTGGCCATGGATTTTTCTGGACAAATCGGAAGAGTGATCGATAACCCGGCTGAAGCCCAGAGTGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CAA 72 bp | CTGGGCTTCAGCCGGGTTATCGATCACTCTTCCGATTaGTCCAGAAAAATCCATGGCCACAAGAGAATTCTC | + |
Preference number: 6 (lower is better) Translates to: LGFSRVIDHSSD*SRKIHGHKRIL Trigger: GAGAATTCTCTTGTGGCCATGGATTTTTCTGGACAAATCGGAAGAGTGATCGATAACCCGGCTGAAGCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS TCA 72 bp | AGTGTCGGTTGGACACTGGTTCTTAGGTTGTTTCTTTaGAAATCTCGCAGTGGTCTTTGTCCACAGACCTGG | + |
Preference number: 6 (lower is better) Translates to: SVGWTLVLRLFL*KSRSGLCPQTW Trigger: CCAGGTCTGTGGACAAAGACCACTGCGAGATTTTCAAAGAAACAACCTAAGAACCAGTGTCCAACCGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000143386.8 |
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CDS GCA 72 bp | AACTTGGTGTTCCCATCATCCAGAGTGAAGAAGGTCTaGCCATCATCCTCGCAAGGTAAGATCTGGAAGTTT | + |
Preference number: 6 (lower is better) Translates to: NLVFPSSRVKKV*PSSSQGKIWKF Trigger: AAACTTCCAGATCTTACCTTGCGAGGATGATGGGCAGACCTTCTTCACTCTGGATGATGGGAACACCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS TCA 72 bp | TCGCAAGGTAAGATCTGGAAGTTTTTAATCTTCTGGTaGTGGCACAGTGTCAGTACGAACGCCTTTGGATTA | + |
Preference number: 6 (lower is better) Translates to: SQGKIWKFLIFW*WHSVSTNAFGL Trigger: TAATCCAAAGGCGTTCGTACTGACACTGTGCCATCACCAGAAGATTAAAAACTTCCAGATCTTACCTTGCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |
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CDS CCA 72 bp | GCACCAATTGACCATCTGATCCGGGAAGAAGTTCACTaGATTCTTAAAGAACTCGTACTTCGCATAATTCTT | + |
Preference number: 6 (lower is better) Translates to: APIDHLIREEVH*ILKELVLRIIL Trigger: AAGAATTATGCGAAGTACGAGTTCTTTAAGAATCCAGTGAACTTCTTCCCGGATCAGATGGTCAATTGGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093321.12 ENSMUST00000109653.8 ENSMUST00000109654.8 |