Pregenerated sensors for GRAMD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035900Ensembl transcript IDs: ENSMUST00000088931.10, ENSMUST00000123349.2, ENSMUST00000138134.8
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCAGAGCACTGCGGAACCTGCTTGCTGGACCTGGGCGTGTGTCTaGGACCCGGGGAAGACCCTCTCCCACTTCCTCCCCGACAGTCGT | + |
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Preference number: 1 (lower is better) Translates to: GQSTAEPACWTWACV*DPGKTLSHFLPDSR Trigger: ACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTCCCCGGGTCCCAGACACACGCCCAGGTCCAGCAAGCAGGTTCCGCAGTGCTCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR GCA 90 bp | AGGGGCTGGGTCTGCACCCAGGCCGGGAAGGAGAGTGAGGGGCTGTaGTTAGCAGGGCCTGAGGACCAGTGTCTTGTGTGCCATCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RGWVCTQAGKESEGL*LAGPEDQCLVCHPS Trigger: TGAAGGATGGCACACAAGACACTGGTCCTCAGGCCCTGCTAAGCACAGCCCCTCACTCTCCTTCCCGGCCTGGGTGCAGACCCAGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR TCA 90 bp | ACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTCTaGGGGCTGGGTGAGATGACTGGCCATTTCTTCACTGGAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: TASECPQQVQRGRRV*GLGEMTGHFFTGEG Trigger: CCCCTCTCCAGTGAAGAAATGGCCAGTCATCTCACCCAGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR TCA 90 bp | GGAGCTGTGTGGCCTCTGCTACGCATCTGGAGTGGTATGTGTGCTTaGTCTGGTTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GAVWPLLRIWSGMCA*SGCLASPSHPQCVA Trigger: GGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACAGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR CCA 90 bp | GATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGGCAGGGAGCATaGGTGGGATGGGATGTGCCTTACCCCTGCAGAGCGTGCAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: DRPPVKSPPLSGQGA*VGWDVPYPCRACSK Trigger: CTTACTGCACGCTCTGCAGGGGTAAGGCACATCCCATCCCACCCATGCTCCCTGCCCCGACAAAGGTGGAGACTTCACAGGTGGGCGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR TCA 90 bp | GGAGGTGTCCTGAGGCCCCACCAGGCTTTCCTGGGCAGACTCCTTTaGCAGGGTGAACAGGTAGGGACCTGGGGCTATGACTATTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GGVLRPHQAFLGRLL*QGEQVGTWGYDYCC Trigger: GCAGCAATAGTCATAGCCCCAGGTCCCTACCTGTTCACCCTGTCAAAGGAGTCTGCCCAGGAAAGCCTGGTGGGGCCTCAGGACACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR TCA 90 bp | GTAGGGTCCTCCCCGACAGCCTCCACAGCCCCCGTGGATGGTCGGTaGCCCACCACACTCAGCATCTGGAAGAAACTGAACTTCTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VGSSPTASTAPVDGR*PTTLSIWKKLNFSV Trigger: CACAGAGAAGTTCAGTTTCTTCCAGATGCTGAGTGTGGTGGGTCACCGACCATCCACGGGGGCTGTGGAGGCTGTCGGGGAGGACCCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR GCA 90 bp | CTGGGACCCGGGGAAGACCCTCTCCCACTTCCTCCCCGACAGTCGTaGTTGGGCCTGTGGCATCACTCACTTCTCTGTCACATACAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LGPGEDPLPLPPRQS*LGLWHHSLLCHIQN Trigger: GTTCTGTATGTGACAGAGAAGTGAGTGATGCCACAGGCCCAAGCACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTCCCCGGGTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | GGAGTTAGGAAGTCCAGAGAGCTAGGCAGAGTGTGGAACAGAGGTTaGGCCAGAGCACTGCGGAACCTGCTTGCTGGACCTGGGCGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GVRKSRELGRVWNRG*ARALRNLLAGPGRV Trigger: CACACGCCCAGGTCCAGCAAGCAGGTTCCGCAGTGCTCTGGCCCAACCTCTGTTCCACACTCTGCCTAGCTCTCTGGACTTCCTAACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | TGTGTGGCCTCTGCTACGCATCTGGAGTGGTATGTGTGCTTGATCTaGTTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: CVASATHLEWYVCLI*LPGKPFPPPVCGLK Trigger: CTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR CCA 90 bp | CTGCTAAGTAGGGTCCTCCCCGACAGCCTCCACAGCCCCCGTGGATaGTCGGTGACCCACCACACTCAGCATCTGGAAGAAACTGAACTT | + |
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Preference number: 1 (lower is better) Translates to: LLSRVLPDSLHSPRG*SVTHHTQHLEETEL Trigger: AAGTTCAGTTTCTTCCAGATGCTGAGTGTGGTGGGTCACCGACCATCCACGGGGGCTGTGGAGGCTGTCGGGGAGGACCCTACTTAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR GCA 90 bp | CTATCACCCATGAAGCCATCCTCACGGACAGGTCAGAGGCCATGTTaGCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: LSPMKPSSRTGQRPC*LPSGTLGCSFSDSV Trigger: CACGGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTGACCTGTCCGTGAGGATGGCTTCATGGGTGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR CCA 90 bp | GAAAGCGTCCAGCATCTTCGTCCTTACTCAGACCAGCTGGAGCACTaGAGACGTAGCTCCGTGATGAGGCTGTCTGCAGCCTGCGTGACA | + |
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Preference number: 1 (lower is better) Translates to: ESVQHLRPYSDQLEH*RRSSVMRLSAACVT Trigger: TGTCACGCAGGCTGCAGACAGCCTCATCACGGAGCTACGTCTCCAGTGCTCCAGCTGGTCTGAGTAAGGACGAAGATGCTGGACGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | TGGCCAGGGAATGGAGTTAGGAAGTCCAGAGAGCTAGGCAGAGTGTaGAACAGAGGTTGGGCCAGAGCACTGCGGAACCTGCTTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: WPGNGVRKSRELGRV*NRGWARALRNLLAG Trigger: TCCAGCAAGCAGGTTCCGCAGTGCTCTGGCCCAACCTCTGTTCCACACTCTGCCTAGCTCTCTGGACTTCCTAACTCCATTCCCTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | GAAGACCCTCTCCCACTTCCTCCCCGACAGTCGTGCTTGGGCCTGTaGCATCACTCACTTCTCTGTCACATACAGAACCCCGTTCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: EDPLPLPPRQSCLGL*HHSLLCHIQNPVPD Trigger: ATCAGGAACGGGGTTCTGTATGTGACAGAGAAGTGAGTGATGCCACAGGCCCAAGCACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | AGCATCCCAAATGAGAGAATTCATGAGCCCAAGGGAGGGCAGGGCTaGCCAGGGAATGGAGTTAGGAAGTCCAGAGAGCTAGGCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: SIPNERIHEPKGGQG*PGNGVRKSRELGRV Trigger: CACTCTGCCTAGCTCTCTGGACTTCCTAACTCCATTCCCTGGCCAGCCCTGCCCTCCCTTGGGCTCATGAATTCTCTCATTTGGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR GCA 90 bp | GGCCAATATAACCAGCCACAGTCCAGGAGAATTATTGCCGAAGACTaGGAGGATGTCCGCTCCTCCAGCCAGCGGTTGGAAAGGATTCCA | + |
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Preference number: 1 (lower is better) Translates to: GQYNQPQSRRIIAED*EDVRSSSQRLERIP Trigger: TGGAATCCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTCGGCAATAATTCTCCTGGACTGTGGCTGGTTATATTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR GCA 90 bp | AGTCTCCACCTTTGTCGGGGCAGGGAGCATGGGTGGGATGGGATGTaGCTTACCCCTGCAGAGCGTGCAGTAAGAGACAATAAATACTGT | + |
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Preference number: 1 (lower is better) Translates to: SLHLCRGREHGWDGM*LTPAERAVRDNKYC Trigger: ACAGTATTTATTGTCTCTTACTGCACGCTCTGCAGGGGTAAGGCACATCCCATCCCACCCATGCTCCCTGCCCCGACAAAGGTGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR GCA 90 bp | TGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTaGCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: CRWLMVELGATSLTY*PDPWSVFISLSQRK Trigger: CTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR TCA 90 bp | GTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTaGCCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: VANGRTWGHLPDLLP*PMVSLHLSFPKKET Trigger: AGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR TCA 90 bp | AGCCATTCTCGCACACTGCTAGCGGGCGCTCGTTTTCAGTCAAGTTaGAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTGAAAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: SHSRTLLAGARFQSS*RFRGSSPSWCCESV Trigger: GACGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGAAAACGAGCGCCCGCTAGCAGTGTGCGAGAATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CCA 90 bp | GTGCTGAGGCATAGCATGGACAAAGTGCTTTATAGTCCCATGGAGTaGAGAAAGGCCAAAGCTACCGTTAGCCTAGCCTCAGACAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VLRHSMDKVLYSPME*RKAKATVSLASDSK Trigger: CTTGCTGTCTGAGGCTAGGCTAACGGTAGCTTTGGCCTTTCTCCACTCCATGGGACTATAAAGCACTTTGTCCATGCTATGCCTCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR TCA 90 bp | TCAGTCAAGTTGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTaGAAGCGTCCAGCATCTTCGTCCTTACTCAGACCAGCTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SVKLKISWKFPFLVL*KRPASSSLLRPAGA Trigger: TGCTCCAGCTGGTCTGAGTAAGGACGAAGATGCTGGACGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR GCA 90 bp | AAAATTGAACATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTaGCCAGATCACACAATCCAGTACAAACCCCAGTGTCTCTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: KIEHSRSVISEQLNT*PDHTIQYKPQCLCK Trigger: CTTACAGAGACACTGGGGTTTGTACTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATGTTCAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCCAGGATGGCAGGGGCTaGGTCTGCACCCAGGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAQDGRG*VCTQAG Trigger: CCCGGCCTGGGTGCAGACCCAGCCCCTGCCATCCTG...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACAAGGCAACTCTGGCCCCTAACCTCTAGGCTCTGCCCACAGCTGTCTGCTCAGGATGGCAGGGGCTaGGTCTGCACCCAGGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: RTRQLWPLTSRLCPQLSAQDGRG*VCTQAG Trigger: CCCGGCCTGGGTGCAGACCCAGCCCCTGCCATCCTG...AGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTATGACTATTGCTGCAGGTGTGGGGGACAGGATGGTAAAGGGTCCCATGGGCAGGGGCTGGGTCTaGACCCAGGCCGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GAMTIAAGVGDRMVKGPMGRGWV*TQAGKE Trigger: CTCCTTCCCGGCCTGGGTGCAGACCCAGCCCCTGCC...CATGGGACCCTTTACCATCCTGTCCCCCACACCTGCAGCAATAGTCATAGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCCCCTGGGAATCTGCCCACAGCTGTCTaGTGTGGCACAGGGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LPGKPFPPPVCGLKSPGNLPTAV*CGTGSS Trigger: GGAGGACCCTGTGCCACAGCAGACAGCTGTGGGCAG...ATTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCTACCCACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTGGCCATTTCTTCACTaGAGAGGGGCCTCCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: RPYPQPRSAHSRSNVEGGWPFLH*RGASPP Trigger: TGGTGGGGAGGCCCCTCTCCAGTGAAGAAATGGCCA...CCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTGGGTAGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCGGCCGGGAAGGAGAGTaGGGGGCTGTGCTTAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSGREGE*GAVLSR Trigger: CCTGCTAAGCACAGCCCCTCACTCTCCTTCCCGGCC...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR GCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACGGCAGGGGCTGGGTCTaGACCCAGGCCGGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLKDLPVANGRTWGHLPDGRGWV*TQAGKE Trigger: CTCCTTCCCGGCCTGGGTGCAGACCCAGCCCCTGCC...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGAAGGGAGGGCAGGGCTaGCCAGGGAATGGAGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: QRPRPARSPTCEVSTFVGKGGQG*PGNGVR Trigger: CCTAACTCCATTCCCTGGCCAGCCCTGCCCTCCCTT...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR CAA 90 bp | GGACCCGGGGAAGACCCTCTCCCACTTCCTCCCCGACAGTCGTGCTaGGGCCTGTGGCATCACTCACTTCTCTGTCACATACAGAACCCC | + |
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Preference number: 2 (lower is better) Translates to: GPGEDPLPLPPRQSC*GLWHHSLLCHIQNP Trigger: GGGGTTCTGTATGTGACAGAGAAGTGAGTGATGCCACAGGCCCAAGCACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTCCCCGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCTACCCACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGGCAGGCTCCTCCAGATaGTATAGGGGGTGTCATACT | + |
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Preference number: 2 (lower is better) Translates to: RPYPQPRSAHSRSNVEGGAGSSR*YRGCHT Trigger: AGTATGACACCCCCTATATCATCTGGAGGAGCCTGC...CCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTGGGTAGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCCCCACCCCCAGTGTGTaGCCTGAAGTCCCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSPTPSV*PEVPWE Trigger: TTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGG...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCAGCCAGGTACCTGGAGCTGTGTaGCCTCTGCTACGCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: GSSHNSRVTAAWRPNASQVPGAV*PLLRIW Trigger: CCAGATGCGTAGCAGAGGCCACACAGCTCCAGGTAC...CTGGCTGGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR CAA 90 bp | GTGGCCTCTGCTACGCATCTGGAGTGGTATGTGTGCTTGATCTGGTaGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: VASATHLEWYVCLIW*PGKPFPPPVCGLKS Trigger: GGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR CAA 90 bp | TGGAGCTGTGTGGCCTCTGCTACGCATCTGGAGTGGTATGTGTGCTaGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: WSCVASATHLEWYVC*IWLPGKPFPPPVCG Trigger: GCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACAGCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGGAGGGCTGGGTGAGATaGCTGGCCATTTCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: QRPRPARSPTCEVSTFVGEGWVR*LAISSL Trigger: CAGTGAAGAAATGGCCAGTCATCTCACCCAGCCCTC...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR TCA 90 bp | GTATTCCACCCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGGGGAATGAGGTGTCATaGGCCCAAGCCACCGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VFHPESLPCLRPLCSTPGGNEVS*AQATGP Trigger: AGGCCCGGTGGCTTGGGCTCATGACACCTCATTCCC...CCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATAC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCACTGCCCACAGCTGTCTaGTGTGGCACAGGGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPLPTAV*CGTGSS Trigger: GGAGGACCCTGTGCCACAGCAGACAGCTGTGGGCAG...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | TACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAGGAGCCTCTCAGGATaGCAGGGGCTGGGTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: YHPCRKGPQPFPAMALVERSLSG*QGLGLH Trigger: GTGCAGACCCAGCCCCTGCCATCCTGAGAGGCTCCT...TTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCAGCCAGCAAGAGTGGTCCACCTaGGAGATTCACAGGTGGCGT | + |
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Preference number: 2 (lower is better) Translates to: GSSHNSRVTAAWRPNASQQEWST*EIHRWR Trigger: ACGCCACCTGTGAATCTCCCAGGTGGACCACTCTTG...CTGGCTGGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACGTGCTTAGCAGGGCCTaGGGACCAGTGTCTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PESLPCLRPLCSTPGWQHVLSRA*GPVSCV Trigger: CACACAAGACACTGGTCCTCAGGCCCTGCTAAGCAC...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGCGTGGAAGGAGGGTCTaGGGGCTGGGTGAGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGRGRRV*GLGEMT Trigger: AGTCATCTCACCCAGCCCTCAGACCCTCCTTCCACG...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGACAAGGCAACTCTGGCCCCTAACCTCTAGGCTCTGCCCACAGCTGTCTGCTCCCATAACTCCAGAGTaGCTGCAGCCTGGAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RTRQLWPLTSRLCPQLSAPITPE*LQPGGQ Trigger: TTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGG...AGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACCCCATAACTCCAGAGTaGCTGCAGCCTGGAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PESLPCLRPLCSTPGWQHPITPE*LQPGGQ Trigger: TTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGG...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGCCCCAGTGTGTGGCCTaGAGTCCCCTGGGAATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMPQCVA*SPLGMR Trigger: CCTCATTCCCAGGGGACTTCAGGCCACACACTGGGG...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAAGGAGCCTCTCAGGATaGCAGGGGCTGGGTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLEAKRQPDDHGVSHLTARSLSG*QGLGLH Trigger: GTGCAGACCCAGCCCCTGCCATCCTGAGAGGCTCCT...TGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCTGGCCATTTCTTCACTaGAGAGGGGCCTCCCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SGVVCVLDLVAWQALPTPWPFLH*RGASPP Trigger: TGGTGGGGAGGCCCCTCTCCAGTGAAGAAATGGCCA...GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTACAGCAGGTCCAACGTaGAAGGAGGGTCTGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LGATSLTYCPDPWSVFISTAGPT*KEGLRA Trigger: AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGT...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCACTTGATCTGGTTGCCTaGCAAGCCCTTCCCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPLDLVA*QALPTP Trigger: GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAG...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAGTGCTTAGCAGGGCCTaGGGACCAGTGTCTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LPPLQEGATTIPSYGFGGVLSRA*GPVSCV Trigger: CACACAAGACACTGGTCCTCAGGCCCTGCTAAGCAC...TCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTAGGGACCTGGGGCTATGACTATTGCTGCAGGTGTGGGGGACAGGATGGTGAGGGCTGGGTGAGATaGCTGGCCATTTCTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QVGTWGYDYCCRCGGQDGEGWVR*LAISSL Trigger: CAGTGAAGAAATGGCCAGTCATCTCACCCAGCCCTC...ACCATCCTGTCCCCCACACCTGCAGCAATAGTCATAGCCCCAGGTCCCTACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | GTATTCCACCCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGCACCAACCACTGGCCTaGCCTCTTAGCTGGAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VFHPESLPCLRPLCSTPGHQPLA*PLSWSV Trigger: GACACTCCAGCTAAGAGGTCAGGCCAGTGGTTGGTG...CCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCAAGATCGCCCACCTGTaGAGTCTCCACCTTTGTCGG | + |
|
Preference number: 2 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSKIAHL*SLHLCR Trigger: CCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTT...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTCCCTTCTTGGTGCTGTaGAAGCGTCCAGCATCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: LGATSLTYCPDPWSVFISPFLVL*KRPASS Trigger: CGAAGATGCTGGACGCTTTCACAGCACCAAGAAGGG...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTCTAACCTCTAGGCTCTaGCCACAGCTGTCTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ICRWLMVELGATSLTYCPLTSRL*PQLSAV Trigger: CACAGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAG...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCCTAACCTCTAGGCTCTaGCCACAGCTGTCTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGVVCVLDLVAWQALPTPLTSRL*PQLSAV Trigger: CACAGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAG...GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTAGGACAAGGCAACTCTaGCCCCTAACCTCTAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGATSLTYCPDPWSVFISRTRQL*PLTSRL Trigger: GAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCCCCTGGGAATGGTGGAAAAAGCCTCTaGAGAACAGGGGTCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LPGKPFPPPVCGLKSPGNGGKSL*RTGVIR Trigger: TCTTATGACCCCTGTTCTTCAGAGGCTTTTTCCACC...ATTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCACAAACGCCAGCCAGATaGCCATGGAGTCTCTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAQTPAR*PWSLSL Trigger: AAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTG...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACGCCGAAGAGATTCTGTaGTTTCTGGGCCACATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PESLPCLRPLCSTPGWQHAEEIL*FLGHIQ Trigger: CTGGATGTGGCCCAGAAAGCACAGAATCTCTTCGGC...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTAAGGCTTCATCTCTGTaGACCATGGCACCGAACACC | + |
|
Preference number: 2 (lower is better) Translates to: LGATSLTYCPDPWSVFISKASSL*TMAPNT Trigger: GGTGTTCGGTGCCATGGTGCACAGAGATGAAGCCTT...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACACAGCAGGTCCAACGTaGAAGGAGGGTCTGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLKDLPVANGRTWGHLPDTAGPT*KEGLRA Trigger: AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGT...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAACAGCAGGTCCAACGTaGAAGGAGGGTCTGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLEAKRQPDDHGVSHLTATAGPT*KEGLRA Trigger: AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGT...TGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCACCTGGGCGTGTGTCTaGGACCCGGGGAAGACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WRMLAPKPSKEPSVKKVCTWACV*DPGKTL Trigger: GAGGGTCTTCCCCGGGTCCCAGACACACGCCCAGGT...GCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATGGCCGGGAAGGAGAGTaGGGGGCTGTGCTTAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHGREGE*GAVLSR Trigger: CCTGCTAAGCACAGCCCCTCACTCTCCTTCCCGGCC...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCACCACGTATTCCACCCTaGAAGCCTTCCCTGCTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPPRIPP*KPSLLK Trigger: CTTAAGCAGGGAAGGCTTTCAGGGTGGAATACGTGG...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGACAGAACCCCGTTCCTaGTGTAGTCCGTGGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMTEPRS*CSPWAS Trigger: AGATGCCCACGGACTACATCAGGAACGGGGTTCTGT...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGTAGAAACAGCAATTCCCATGCCTGAGCCAGGGAGGACAGACAAGACTCATGAAGGTGCTTCATaGGCTTGGCACGGGCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: DGVETAIPMPEPGRTDKTHEGAS*AWHGPA Trigger: GGCTGGCCCGTGCCAAGCGCATGAAGCACCTTCATG...AGTCTTGTCTGTCCTCCCTGGCTCAGGCATGGGAATTGCTGTTTCTACACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCACCTGAAAGCCTTCCCTaGTTAAGGCCTCTCTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPPESLP*LRPLCS Trigger: GCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTAGGGACCTGGGGCTATGACTATTGCTGCAGGTGTGGGGGACAGGATGGTTGCGTGGTCTCAGGTTaGACCCACATGAACAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QVGTWGYDYCCRCGGQDGCVVSG*THMNKF Trigger: GAACTTGTTCATGTGGGTGCAACCTGAGACCACGCA...ACCATCCTGTCCCCCACACCTGCAGCAATAGTCATAGCCCCAGGTCCCTACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGTGCCATCCTTCAGACTaGTTAAGAGGATCCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWCHPSD*LRGSSA Trigger: GGCAGAGGATCCTCTTAACCAGTCTGAAGGATGGCA...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCTGCCATCCTTCAGACTaGTTAAGAGGATCCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSCHPSD*LRGSSA Trigger: GGCAGAGGATCCTCTTAACCAGTCTGAAGGATGGCA...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACTGCCATCCTTCAGACTaGTTAAGAGGATCCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PESLPCLRPLCSTPGWQHCHPSD*LRGSSA Trigger: GGCAGAGGATCCTCTTAACCAGTCTGAAGGATGGCA...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGCAGCTATGGCTTTGGTaGAAAAAGCCTCTGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QRPRPARSPTCEVSTFVGQLWLW*KKPLKN Trigger: GTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTG...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCCAGCTATGGCTTTGGTaGAAAAAGCCTCTGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAQLWLW*KKPLKN Trigger: GTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTG...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCAAACGCCAGCCAGATaGCCATGGAGTCTCTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: LLKDLPVANGRTWGHLPDQTPAR*PWSLSL Trigger: AAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTG...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTATGAGTGATAACTCATaGCCAGACACTGATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ICRWLMVELGATSLTYCPMSDNS*PDTDGG Trigger: CCCTCCATCAGTGTCTGGGCATGAGTTATCACTCAT...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCGTTGGGCCAGAGCACTaGGGAACCTGCTTGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: WRMLAPKPSKEPSVKKVCVGPEH*GTCLLD Trigger: GTCCAGCAAGCAGGTTCCGCAGTGCTCTGGCCCAAC...GCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CAA 90 bp | AAAGGCGGCCCACAGGGCAACATAGAGCTTCTGCGTGGTCTCAGGTaGCACCCACATGAACAAGTTCTTGATCTTTTCCAGGATGTCGGC | + |
|
Preference number: 2 (lower is better) Translates to: KGGPQGNIELLRGLR*HPHEQVLDLFQDVG Trigger: GCCGACATCCTGGAAAAGATCAAGAACTTGTTCATGTGGGTGCAACCTGAGACCACGCAGAAGCTCTATGTTGCCCTGTGGGCCGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTGCACGCTCTTTGAGCTaGGGGTCAGTGGGCAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFARSLS*GSVGRL Trigger: GAGCCTGCCCACTGACCCTCAGCTCAAAGAGCGTGC...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTGCCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACTCCATGAAGGTGCTTCATaGGCTTGGCACGGGCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YCPDPWSVFISLSQRKRLHEGAS*AWHGPA Trigger: GGCTGGCCCGTGCCAAGCGCATGAAGCACCTTCATG...GAGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCAGACTGGTTAAGAGGATCCTCTGCCCACCTGTGTCCACAGGTGGTCATGGGATGTCGGCCATCTTaGCGAAGAGATTCTGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PSDWLRGSSAHLCPQVVMGCRPS*RRDSVL Trigger: AAGCACAGAATCTCTTCGGCAAGATGGCCGACATCC...CATGACCACCTGTGGACACAGGTGGGCAGAGGATCCTCTTAACCAGTCTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATTCCACCCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTATAGTCCCATGGAGTaGAGAAAGGCCAAAGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: VFHPESLPCLRPLCSTPGYSPME*RKAKAT Trigger: GGTAGCTTTGGCCTTTCTCCACTCCATGGGACTATA...CCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACACAATCCAGTACAAACCCCAGTGTCTCTGTAAGGATGCCTAGAAGCTACCGTGGAAGGAGGGTCTaGGGGCTGGGTGAGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: ITQSSTNPSVSVRMPRSYRGRRV*GLGEMT Trigger: AGTCATCTCACCCAGCCCTCAGACCCTCCTTCCACG...GTAGCTTCTAGGCATCCTTACAGAGACACTGGGGTTTGTACTGGATTGTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCACACAATCCAGTACAAACCCCAGTGTCTCTGTAAGGATGCCTAGAAGCTACCTTGATCTGGTTGCCTaGCAAGCCCTTCCCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ITQSSTNPSVSVRMPRSYLDLVA*QALPTP Trigger: GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAG...GTAGCTTCTAGGCATCCTTACAGAGACACTGGGGTTTGTACTGGATTGTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCATGTTGCCTTCCCTCTaGCACGTTGGGGTGCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WRMLAPKPSKEPSVKKVCMLPSL*HVGVLL Trigger: AAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACAT...GCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGCGTGGAAGGAGGGTCTaGGGGCTGGGTGAGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: SRSVISEQLNTCPDHTIQRGRRV*GLGEMT Trigger: AGTCATCTCACCCAGCCCTCAGACCCTCCTTCCACG...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCAGGAGCCTCTCAGGATaGCAGGGGCTGGGTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HSRSVISEQLNTCPDHTIRSLSG*QGLGLH Trigger: GTGCAGACCCAGCCCCTGCCATCCTGAGAGGCTCCT...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCACATAGAGCTTCTGCGTaGTCTCAGGTTGCACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: QPFPAMALVEKASEEQGSHRASA*SQVAPT Trigger: TGTGGGTGCAACCTGAGACCACGCAGAAGCTCTATG...TGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGGTGCTTAGCAGGGCCTaGGGACCAGTGTCTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SRSVISEQLNTCPDHTIQVLSRA*GPVSCV Trigger: CACACAAGACACTGGTCCTCAGGCCCTGCTAAGCAC...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCACACAATCCAGTACAAACCCCAGTGTCTCTGTAAGGATGCCTAGAAGCTACCTAACCTCTAGGCTCTaGCCACAGCTGTCTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ITQSSTNPSVSVRMPRSYLTSRL*PQLSAV Trigger: CACAGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAG...GTAGCTTCTAGGCATCCTTACAGAGACACTGGGGTTTGTACTGGATTGTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGGTACCTGGAGCTGTGTaGCCTCTGCTACGCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRSVISEQLNTCPDHTIQVPGAV*PLLRIW Trigger: CCAGATGCGTAGCAGAGGCCACACAGCTCCAGGTAC...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATACATCCAGCACCAGCTaGAACTTCTCAGACACGGTC | + |
|
Preference number: 2 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHTSSTS*NFSDTV Trigger: GACCGTGTCTGAGAAGTTCCAGCTGGTGCTGGATGT...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | CAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCAGGTGGAAAAAGCCTCTaGAGAACAGGGGTCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QPFPAMALVEKASEEQGSGGKSL*RTGVIR Trigger: TCTTATGACCCCTGTTCTTCAGAGGCTTTTTCCACC...TGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGAAGATCGCCCACCTGTaGAGTCTCCACCTTTGTCGG | + |
|
Preference number: 2 (lower is better) Translates to: SRSVISEQLNTCPDHTIQKIAHL*SLHLCR Trigger: CCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTT...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGAACATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACCATGAAGGTGCTTCATaGGCTTGGCACGGGCCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: IEHSRSVISEQLNTCPDHHEGAS*AWHGPA Trigger: GGCTGGCCCGTGCCAAGCGCATGAAGCACCTTCATG...GTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGCTCCGTCTATGTACCTaGAGCTGTGTGGCCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRSVISEQLNTCPDHTIQLRLCT*SCVASA Trigger: AGCAGAGGCCACACAGCTCCAGGTACATAGACGGAG...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGTGATTTTCACATACTaGCTGAAAATGGTCTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMVIFTY*LKMVSK Trigger: CTTTGAGACCATTTTCAGCCAGTATGTGAAAATCAC...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTGCCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACTCAAAAAGCAATCTCAGTaGCATCTGAAGGACTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: YCPDPWSVFISLSQRKRLKKQSQ*HLKDSG Trigger: TCCCGAGTCCTTCAGATGTCACTGAGATTGCTTTTT...GAGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTATGAGTGATAACTCATaGCCAGACACTGATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFMSDNS*PDTDGG Trigger: CCCTCCATCAGTGTCTGGGCATGAGTTATCACTCAT...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCGAACAGGTAGGGACCTaGGGCTATGACTATTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HSRSVISEQLNTCPDHTIEQVGT*GYDYCC Trigger: GCAGCAATAGTCATAGCCCCAGGTCCCTACCTGTTC...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CAA 90 bp | ACTTTATACTTCTGGATGTCTGTGATGTCCATCAGTTTGATCACCTaGTTCCTCTTTGATGACCCAGACTTGGAGCTCTCGAAGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: TLYFWMSVMSISLIT*FLFDDPDLELSKHR Trigger: CCTGTGCTTCGAGAGCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGTATAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTCAGCTATGGCTTTGGTaGAAAAAGCCTCTGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFQLWLW*KKPLKN Trigger: GTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTG...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CAA 90 bp | ACAGACAAGACTTTATACTTCTGGATGTCTGTGATGTCCATCAGTTaGATCACCTTGTTCCTCTTTGATGACCCAGACTTGGAGCTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: TDKTLYFWMSVMSIS*ITLFLFDDPDLELS Trigger: CGAGAGCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGTATAAAGTCTTGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCGGTGGAAAAAGCCTCTaGAGAACAGGGGTCATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSRSVISEQLNTCPDHTIGGKSL*RTGVIR Trigger: TCTTATGACCCCTGTTCTTCAGAGGCTTTTTCCACC...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | CCCCCAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTaGAGTCTCCACCTTTGTCGGGGCAGGGAGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPEAQACKIAHL*SLHLCRGREHG Trigger: CCCATGCTCCCTGCCCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | ACTGCGGAACCTGCTTGCTGGACCTGGGCGTGTGTCTaGGACCCGGGGAAGACCCTCTCCCACTTCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TAEPACWTWACV*DPGKTLSHFLP Trigger: GGGGAGGAAGTGGGAGAGGGTCTTCCCCGGGTCCCAGACACACGCCCAGGTCCAGCAAGCAGGTTCCGCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CCA 72 bp | TTGGGCCAGAGCACTGCGGAACCTGCTTGCTGGACCTaGGCGTGTGTCTGGGACCCGGGGAAGACCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGQSTAEPACWT*ACVWDPGKTLS Trigger: GGAGAGGGTCTTCCCCGGGTCCCAGACACACGCCCAGGTCCAGCAAGCAGGTTCCGCAGTGCTCTGGCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR GCA 72 bp | GAACAGAGGTTGGGCCAGAGCACTGCGGAACCTGCTTaGTGGACCTGGGCGTGTGTCTGGGACCCGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQRLGQSTAEPA*WTWACVWDPGK Trigger: CTTCCCCGGGTCCCAGACACACGCCCAGGTCCAGCAAGCAGGTTCCGCAGTGCTCTGGCCCAACCTCTGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR TCA 72 bp | GAGGATCCTCTGCCCACCTGTGTCCACAGGTGGTCATaGAGGTGCTTCATGCGCTTGGCACGGGCCAGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: EDPLPTCVHRWS*RCFMRLARASP Trigger: CGGGCTGGCCCGTGCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGATCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | CCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATaGGCTTGGCACGGGCCAGCCCGGCACCGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PPVSTGGHEGAS*AWHGPARHRSM Trigger: CATGGAACGGTGCCGGGCTGGCCCGTGCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | CCAGTCTGGGCCCTCACAGGACACCAACCACTGGCCTaGCCTCTTAGCTGGAGTGTCAGGCCAAGACGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PVWALTGHQPLA*PLSWSVRPRRA Trigger: GGCTCGTCTTGGCCTGACACTCCAGCTAAGAGGTCAGGCCAGTGGTTGGTGTCCTGTGAGGGCCCAGACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | AGAACAGGGGTCATAAGACCAAGGAGCCTCTCAGGATaGCAGGGGCTGGGTCTGCACCCAGGCCGGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTGVIRPRSLSG*QGLGLHPGREG Trigger: TCCTTCCCGGCCTGGGTGCAGACCCAGCCCCTGCCATCCTGAGAGGCTCCTTGGTCTTATGACCCCTGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CCTGTGAAGTCTCCACCTTTGTCGGGGCAGGGAGCATaGGTGGGATGGGATGTGCCTTACCCCTGCAGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: PVKSPPLSGQGA*VGWDVPYPCRA Trigger: CGCTCTGCAGGGGTAAGGCACATCCCATCCCACCCATGCTCCCTGCCCCGACAAAGGTGGAGACTTCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTaGCAACACTCACAACCCAGGCACCGCCAGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCLRPLCSTPG*QHSQPRHRQGP Trigger: TGGACCCTGGCGGTGCCTGGGTTGTGAGTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | CTGAGGCCCCACCAGGCTTTCCTGGGCAGACTCCTTTaGCAGGGTGAACAGGTAGGGACCTGGGGCTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LRPHQAFLGRLL*QGEQVGTWGYD Trigger: GTCATAGCCCCAGGTCCCTACCTGTTCACCCTGTCAAAGGAGTCTGCCCAGGAAAGCCTGGTGGGGCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR TCA 72 bp | TCCCCGACAGCCTCCACAGCCCCCGTGGATGGTCGGTaGCCCACCACACTCAGCATCTGGAAGAAACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPTASTAPVDGR*PTTLSIWKKLN Trigger: GTTCAGTTTCTTCCAGATGCTGAGTGTGGTGGGTCACCGACCATCCACGGGGGCTGTGGAGGCTGTCGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR GCA 72 bp | GGGGAAGACCCTCTCCCACTTCCTCCCCGACAGTCGTaGTTGGGCCTGTGGCATCACTCACTTCTCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GEDPLPLPPRQS*LGLWHHSLLCH Trigger: GTGACAGAGAAGTGAGTGATGCCACAGGCCCAAGCACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTGTAGAAACAGCAATTCCCATGCCTGAGCCAGGGAGGACAGACAAGACTAGGTGCTTCATGCGCTaGGCACGGGCCAGCCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGVETAIPMPEPGRTDKTRCFMR*ARASPA Trigger: TGCCGGGCTGGCCCGTGCCAAGCGCATGAAGCACCT...AGTCTTGTCTGTCCTCCCTGGCTCAGGCATGGGAATTGCTGTTTCTACACCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCGTGTGCTTGATCTGGTaGCCTGGCAAGCCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSVCLIW*PGKPFP Trigger: TGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACAC...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAGGGACCTGGGGCTATGACTATTGCTGCAGGTGTGGGGGACAGGATGGTAGTGTGGAACAGAGGTaGGGCCAGAGCACTGCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QVGTWGYDYCCRCGGQDGSVEQR*GQSTAE Trigger: TTCCGCAGTGCTCTGGCCCAACCTCTGTTCCACACT...ACCATCCTGTCCCCCACACCTGCAGCAATAGTCATAGCCCCAGGTCCCTACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCAAGGTGCTTCATGCGCTaGGCACGGGCCAGCCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPFPAMALVEKASEEQGSRCFMR*ARASPA Trigger: TGCCGGGCTGGCCCGTGCCAAGCGCATGAAGCACCT...TGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | GAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTCTaGGGGCTGGGTGAGATGACTGGCCATTTCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: ECPQQVQRGRRV*GLGEMTGHFFT Trigger: AGTGAAGAAATGGCCAGTCATCTCACCCAGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGTGGGCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | TGTGTGGCCTCTGCTACGCATCTGGAGTGGTATGTGTaGTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: CVASATHLEWYV*LIWLPGKPFPP Trigger: GGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | ATGAAGCCATCCTCACGGACAGGTCAGAGGCCATGTTaGCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MKPSSRTGQRPC*LPSGTLGCSFS Trigger: AGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTGACCTGTCCGTGAGGATGGCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | ACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTaGAGGCCAAACGCCAGCCAGATGACCATGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TGSSHNSRVTAA*RPNASQMTMES Trigger: AGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | GCATCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTaGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASGVVCVLDLVA*QALPTPSVWPE Trigger: TTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CAGCATCTTCGTCCTTACTCAGACCAGCTGGAGCACTaGAGACGTAGCTCCGTGATGAGGCTGTCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QHLRPYSDQLEH*RRSSVMRLSAA Trigger: GGCTGCAGACAGCCTCATCACGGAGCTACGTCTCCAGTGCTCCAGCTGGTCTGAGTAAGGACGAAGATGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCTTCCCAGCTATGGCTTaGGTGGAAAAAGCCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAFPAMA*VEKASE Trigger: TTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAA...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCACTGCGTGGTCTCAGGTaGCACCCACATGAACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTAVCCGTGSSHNSRVTALRGLR*HPHEQV Trigger: AACTTGTTCATGTGGGTGCAACCTGAGACCACGCAG...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR TCA 72 bp | GGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTaGCCCATGGTCAGTCTTCATCTCTCTTTCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRTWGHLPDLLP*PMVSLHLSFPK Trigger: CTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | TGTCAGGCCAAGACGAGCCAGATGAGTGATAACTCATaGCCAGACACTGATGGAGGGGCAGGTACCCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CQAKTSQMSDNS*PDTDGGAGTPK Trigger: TTTGGGGGTACCTGCCCCTCCATCAGTGTCTGGGCATGAGTTATCACTCATCTGGCTCGTCTTGGCCTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CCTGAGGACCAGTGTCTTGTGTGCCATCCTTCAGACTaGTTAAGAGGATCCTCTGCCCACCTGTGTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PEDQCLVCHPSD*LRGSSAHLCPQ Trigger: CTGTGGACACAGGTGGGCAGAGGATCCTCTTAACCAGTCTGAAGGATGGCACACAAGACACTGGTCCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CATCCAGACTCCTCCGTCTATGTACCTGGAGCTGTGTaGCCTCTGCTACGCATCTGGAGTGGTATGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HPDSSVYVPGAV*PLLRIWSGMCA Trigger: AGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACAGCTCCAGGTACATAGACGGAGGAGTCTGGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | GTCTCTGTAAGGATGCCTAGAAGCTACATAGGCCCCTaGCCCAGCCCTGACCCCCTAAGCTCTACTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSVRMPRSYIGP*PSPDPLSSTQR Trigger: TCTTTGAGTAGAGCTTAGGGGGTCAGGGCTGGGCCAGGGGCCTATGTAGCTTCTAGGCATCCTTACAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | AAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTTaGAAAGGATTCCAGCAACACCCCAGAGTCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: KTARMSAPPASG*KGFQQHPRVNT Trigger: AGTATTGACTCTGGGGTGTTGCTGGAATCCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | TGTGTGCCATCCTTCAGACTGGTTAAGAGGATCCTCTaGCCACCTGTGTCCACAGGTGGTCATGAAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVPSFRLVKRIL*PPVSTGGHEGA Trigger: AGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGATCCTCTTAACCAGTCTGAAGGATGGCACACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | ACTCCTCCGTCTATGTACCTGGAGCTGTGTGGCCTCTaGTACGCATCTGGAGTGGTATGTGTGCTTGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPPSMYLELCGL*YASGVVCVLDL Trigger: CAGATCAAGCACACATACCACTCCAGATGCGTAGCAGAGGCCACACAGCTCCAGGTACATAGACGGAGGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CCA 72 bp | CCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTaGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDDHGVSHLTAG*RMLAPKPSKEP Trigger: TGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCACCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | GCAATCTCAGTGACATCTGAAGGACTCGGGACAAGCTaGAGGAGACAAGAGTGGTCCACCTGGGAGATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AISVTSEGLGTS*RRQEWSTWEIH Trigger: GTGAATCTCCCAGGTGGACCACTCTTGTCTCCTTCAGCTTGTCCCGAGTCCTTCAGATGTCACTGAGATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | CCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTTaGCGACACTACGCCAGTCTGGGCCCTCACAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PSKEPSVKKVCF*RHYASLGPHRT Trigger: TGTCCTGTGAGGGCCCAGACTGGCGTAGTGTCGGCAAAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR GCA 72 bp | AAACTAAACCACGTATTCCACCCTGAAAGCCTTCCCTaGTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KLNHVFHPESLP*LRPLCSTPGWQ Trigger: TTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATACGTGGTTTAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | CCCTGTTGTAGCCCTCCCTCAGATCTCACAAGGTGCTaGGGCATAGCATGGACAAAGTGCTTTATAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCCSPPSDLTRC*GIAWTKCFIVP Trigger: TGGGACTATAAAGCACTTTGTCCATGCTATGCCTCAGCACCTTGTGAGATCTGAGGGAGGGCTACAACAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR GCA 72 bp | CCAGAGTCAATACTAGCTGTCACCGCCAGAGGCCGCTaGAGACGTGATTTTCACATACTGGCTGAAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PESILAVTARGR*RRDFHILAENG Trigger: ACCATTTTCAGCCAGTATGTGAAAATCACGTCTGCAGCGGCCTCTGGCGGTGACAGCTAGTATTGACTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGGTGTGCTTGATCTGGTaGCCTGGCAAGCCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRSVISEQLNTCPDHTIQVCLIW*PGKPFP Trigger: TGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACAC...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTGCCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACTCGAGTGGTATGTGTGCTaGATCTGGTTGCCTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YCPDPWSVFISLSQRKRLEWYVC*IWLPGK Trigger: CTTGCCAGGCAACCAGATCAAGCACACATACCACTC...GAGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | ACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTaGAGAACAGGGGTCATAAGACCAAGGAGCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TIPSYGFGGKSL*RTGVIRPRSLS Trigger: TGAGAGGCTCCTTGGTCTTATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR TCA 72 bp | TTGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTaGAAGCGTCCAGCATCTTCGTCCTTACTCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LKISWKFPFLVL*KRPASSSLLRP Trigger: TGGTCTGAGTAAGGACGAAGATGCTGGACGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CCA 72 bp | CATAGCATGGACAAAGTGCTTTATAGTCCCATGGAGTaGAGAAAGGCCAAAGCTACCGTTAGCCTAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HSMDKVLYSPME*RKAKATVSLAS Trigger: TGAGGCTAGGCTAACGGTAGCTTTGGCCTTTCTCCACTCCATGGGACTATAAAGCACTTTGTCCATGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR TCA 72 bp | ACTGGACCCTCAAAGGTCACTATAAAGCCCACTTTCTaGGAGATTCTACCCCTTGTCCATCTGAATAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TGPSKVTIKPTF*EILPLVHLNSH Trigger: GTGGCTATTCAGATGGACAAGGGGTAGAATCTCTCAGAAAGTGGGCTTTATAGTGACCTTTGAGGGTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CCA 72 bp | CCTGAGCCAGGGAGGACAGACAAGACTTTATACTTCTaGATGTCTGTGATGTCCATCAGTTTGATCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PEPGRTDKTLYF*MSVMSISLITL Trigger: CAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGTATAAAGTCTTGTCTGTCCTCCCTGGCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR GCA 72 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTaGCCAGATCACACAATCCAGTACAAACCCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSRSVISEQLNT*PDHTIQYKPQC Trigger: ACACTGGGGTTTGTACTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTCTGAGGGCTCTGCTGAGGCTGTGCTaGCTGCTCCTCGGACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGVPTAGPTWKEGLRALLRLC*LLLGPG Trigger: GCCAGGTCCGAGGAGCAGCCAGCACAGCCTCAGCAG...AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GCGCTTGGCACGGGCCAGCCCGGCACCGTTCCATGTGAGTTCCAGCCCTTCTGGACAGGAACATGGGGATaGCCCAGCCGTGCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGTGQPGTVPCEFQPFWTGTWG*PSRATQ Trigger: CTGTGTGGCACGGCTGGGCCATCCCCATGTTCCTGT...CCAGAAGGGCTGGAACTCACATGGAACGGTGCCGGGCTGGCCCGTGCCAAGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCCCCTTTGGTGGCTGCTaGGGCTGTGCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAPFGGC*GCAGCS Trigger: GGAGCAGCCAGCACAGCCTCAGCAGCCACCAAAGGG...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCGGCCTCACCTGGACATaGCGGGGAGGCTCCCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSAHLCPQVVMKVLHALGGLTWT*RGGSPA Trigger: CGCAGGGGAGCCTCCCCGTCATGTCCAGGTGAGGCC...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGGCCTCACCTGGACATaGCGGGGAGGCTCCCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAGLTWT*RGGSPA Trigger: CGCAGGGGAGCCTCCCCGTCATGTCCAGGTGAGGCC...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCACGGGCCTGCTGAGGCTGTGCTaGCTGCTCCTCGGACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHLCPQVVMKVLHALGTGLLRLC*LLLGPG Trigger: GCCAGGTCCGAGGAGCAGCCAGCACAGCCTCAGCAG...GCCCGTGCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCCGGGAGGCCAAGCCCTaGCTGCGGCGCTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAHLCPQVVMKVLHALGREAKP*LRRSVP Trigger: AGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCCG...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCCCCTGGGAATGAAGTCCTGCACGCCTaGCGCCATGATGAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGKPFPPPVCGLKSPGNEVLHA*RHDEGP Trigger: GGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTC...ATTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTCTGAGGGCTCTAGGAACAGGAACATaGGGATGGCCCAGCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLGVPTAGPTWKEGLRALGTGT*GWPSRA Trigger: GGCACGGCTGGGCCATCCCCATGTTCCTGTTCCTAG...AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGGCCTCACCTGGACATaGCGGGGAGGCTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAGLTWT*RGGSLP Trigger: TGGAAGGGAGCCTCCCCGTCATGTCCAGGTGAGGCC...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTACCCACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGCCCTTCTTGGTGCTGTaGAAGCGTCCAGCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RPYPQPRSAHSRSNVEGGPFLVL*KRPASS Trigger: CGAAGATGCTGGACGCTTTCACAGCACCAAGAAGGG...CCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTGGGTAGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCAGCCAGCATGATGAGGGTCCCTaGACCAGCAGGGTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSHNSRVTAAWRPNASQHDEGP*TSRVPE Trigger: CTCAGGGACCCTGCTGGTCCAGGGACCCTCATCATG...CTGGCTGGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGCTGCTGAGGCTGTGCTaGCTGCTCCTCGGACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWLLRLC*LLLGPG Trigger: GCCAGGTCCGAGGAGCAGCCAGCACAGCCTCAGCAG...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCGGGAGGCCAAGCCCTaGCTGCGGCGCTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKDLPVANGRTWGHLPDREAKP*LRRSVP Trigger: AGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCCG...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GTATTCCACCCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGCCCTTTGGTGGCTGCTaGGGCTGTGCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFHPESLPCLRPLCSTPGPFGGC*GCAGCS Trigger: GGAGCAGCCAGCACAGCCTCAGCAGCCACCAAAGGG...CCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | AGGACAAGGCAACTCTGGCCCCTAACCTCTAGGCTCTGCCCACAGCTGTCTGCTGAAGTCCTGCACGCCTaGCGCCATGATGAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRQLWPLTSRLCPQLSAEVLHA*RHDEGP Trigger: GGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTC...AGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCCCCTGGGAATTCCCGATCCAGCTCCTaGCGCAGCATCTCTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGKPFPPPVCGLKSPGNSRSSS*RSISEL Trigger: CAACTCAGAGATGCTGCGGCAGGAGCTGGATCGGGA...ATTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTACCCACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGAAACAGCAATTCCCATaGCTGAGCCAGGGAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPYPQPRSAHSRSNVEGGKQQFP*LSQGGQ Trigger: CTGTCCTCCCTGGCTCAGGCATGGGAATTGCTGTTT...CCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTGGGTAGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GGCATAGAGGCCAACAGCAAGCCCCACCAGGCGGTAGGGGAAGAAGCAAGAAGCCATGATGAGGGTCCCTaGACCAGCAGGGTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIEANSKPHQAVGEEARSHDEGP*TSRVPE Trigger: CTCAGGGACCCTGCTGGTCCAGGGACCCTCATCATG...GCTTCTTGCTTCTTCCCCTACCGCCTGGTGGGGCTTGCTGTTGGCCTCTATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTACCCTTTGGTGGCTGCTaGGGCTGTGCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLTTPAGRGHNHSQLPFGGC*GCAGCS Trigger: GGAGCAGCCAGCACAGCCTCAGCAGCCACCAAAGGG...TAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCCTGTGCCTGTGCCATTaGTGGCCTGGCTCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAHLCPQVVMKVLHALGLCLCH*WPGSVP Trigger: AGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAG...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACCTGTGCCTGTGCCATTaGTGGCCTGGCTCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PESLPCLRPLCSTPGWQHLCLCH*WPGSVP Trigger: AGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAG...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCCTGTGCCTGTGCCATTaGTGGCCTGGCTCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSLCLCH*WPGSVP Trigger: AGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAG...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCCATGATGAGGGTCCCTaGACCAGCAGGGTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSHDEGP*TSRVPE Trigger: CTCAGGGACCCTGCTGGTCCAGGGACCCTCATCATG...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCGCTGCTCCTCGGACCTaGCCTTTAGCACCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTILSILPPLQEGATTIPAAPRT*PLAPPA Trigger: TGCAGGAGGTGCTAAAGGCCAGGTCCGAGGAGCAGC...GGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGCAACTCTGGCCCCTAACCTCTAGGCTCTGCCCACAGCTGTCTGCTCTGGCTCTGTCCCTTTaGTGGCTGCTGAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTRQLWPLTSRLCPQLSALALSL*WLLRLC Trigger: GCACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAG...AGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGCTGGCTCTGTCCCTTTaGTGGCTGCTGAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWLALSL*WLLRLC Trigger: GCACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAG...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTACAGGAACATGGGGATaGCCCAGCCGTGCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICRWLMVELGATSLTYCPTGTWG*PSRATQ Trigger: CTGTGTGGCACGGCTGGGCCATCCCCATGTTCCTGT...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | GCTACGCATCTGGAGTGGTATGTGTGCTTGATCTGGTaGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATHLEWYVCLIW*PGKPFPPPVCG Trigger: GCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGATGCGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | CATGAAGCCATCCTCACGGACAGGTCAGAGGCCATGTaGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HEAILTDRSEAM*PSLWHVGVLLL Trigger: GAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTGACCTGTCCGTGAGGATGGCTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTTCCTATCCAGCCTCCTaGGCATGTTCAGCACGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICRWLMVELGATSLTYCPSYPAS*ACSARH Trigger: GTGCCGTGCTGAACATGCTCAGGAGGCTGGATAGGA...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGAGACAAGAGTGGTCCACCTGGGAGATTCACAGGTGGCGTCGTGGTTGTGCCATTGCTGGCCTaGCTCTGTCCCTTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEGDKSGPPGRFTGGVVVVPLLA*LCPFGG Trigger: GCCACCAAAGGGACAGAGCCAGGCCAGCAATGGCAC...AACCACGACGCCACCTGTGAATCTCCCAGGTGGACCACTCTTGTCTCCTTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGGTGCCATTGCTGGCCTaGCTCTGTCCCTTTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGVPLLA*LCPFGG Trigger: GCCACCAAAGGGACAGAGCCAGGCCAGCAATGGCAC...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCACGGGAGGCCAAGCCCTaGCTGCGGCGCTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPFPAMALVEKASEEQGSREAKP*LRRSVP Trigger: AGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCCG...TGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGTGGCAACACCTGCCGCAGCATCTCTaGGTTGGTCTCTTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PESLPCLRPLCSTPGWQHLPQHL*VGLFSK Trigger: CTTCGAGAAGAGACCAACTCAGAGATGCTGCGGCAG...GTGTTGCCACCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCCCCTTCTTGGTGCTGTaGAAGCGTCCAGCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGVVCVLDLVAWQALPTPPFLVL*KRPASS Trigger: CGAAGATGCTGGACGCTTTCACAGCACCAAGAAGGG...GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGA 58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTACAGAACCCCGTTCCTaGTGTAGTCCGTGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGATSLTYCPDPWSVFISTEPRS*CSPWAS Trigger: AGATGCCCACGGACTACATCAGGAACGGGGTTCTGT...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGACAGAACCCCGTTCCTaGTGTAGTCCGTGGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWTEPRS*CSPWAS Trigger: AGATGCCCACGGACTACATCAGGAACGGGGTTCTGT...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGAGTTCCAGCCCTTCTGGTCTGCAGAGCCTAGGCCAATATAACCAGCCAGAAGTCCTGCACGCCTaGCGCCATGATGAGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVSSSPSGLQSLGQYNQPEVLHA*RHDEGP Trigger: GGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTC...TGGCTGGTTATATTGGCCTAGGCTCTGCAGACCAGAAGGGCTGGAACTCACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCCATGTTGCCTTCCCTCTGGCACGTTGGGGTGCTCCTTCTCTGATTCCGGGATGGCCCAGCCGTaGCACACAGCATTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QRPCCLPSGTLGCSFSDSGMAQP*HTAFMY Trigger: ATACATGAATGCTGTGTGGCACGGCTGGGCCATCCC...GGAATCAGAGAAGGAGCACCCCAACGTGCCAGAGGGAAGGCAACATGGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGCCCAGGGTCTGGGGCTaGCATCCAGAGAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHNHSQLWLWWKKPLKNRPRVWG*HPERLL Trigger: CAGGAGCCTCTCTGGATGCCAGCCCCAGACCCTGGG...CCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR CCA 90 bp | TGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCACGGGGTGTTCTCCTCTGGTTaGAAGCGGAAGTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CPPVSTGGHEGASCAWHGVFSSG*KRKSSM Trigger: CATCGAGGACTTCCGCTTCCAACCAGAGGAGAACAC...CCCGTGCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCACTAGGAACAGGAACATaGGGATGGCCCAGCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLEAKRQPDDHGVSHLTALGTGT*GWPSRA Trigger: GGCACGGCTGGGCCATCCCCATGTTCCTGTTCCTAG...TGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TACTGCCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACTCGACCAGCAGGGTCCCTaGGCTCCTCACTGTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YCPDPWSVFISLSQRKRLDQQGP*APHCPG Trigger: CCCGGGACAGTGAGGAGCTCAGGGACCCTGCTGGTC...GAGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GTATTCCACCCTGAAAGCCTTCCCTGCTTAAGGCCTCTCTGTAGCACACCGGGGCTGCCGCAGCATCTCTaGGTTGGTCTCTTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFHPESLPCLRPLCSTPGLPQHL*VGLFSK Trigger: CTTCGAGAAGAGACCAACTCAGAGATGCTGCGGCAG...CCCCGGTGTGCTACAGAGAGGCCTTAAGCAGGGAAGGCTTTCAGGGTGGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | AGGACAAGGCAACTCTGGCCCCTAACCTCTAGGCTCTGCCCACAGCTGTCTGCTGCAGGCTCCTCCAGATaGTATAGGGGGTGTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RTRQLWPLTSRLCPQLSAAGSSR*YRGCHT Trigger: AGTATGACACCCCCTATATCATCTGGAGGAGCCTGC...AGCAGACAGCTGTGGGCAGAGCCTAGAGGTTAGGGGCCAGAGTTGCCTTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCGCCTTTAGCACCTCCTaGATTTTCTGTTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAAFSTS*IFCSSS Trigger: CGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGC...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTACACTTCCGGCACAATaGTCCATTGTATCCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICRWLMVELGATSLTYCPTLPAQ*SIVSAS Trigger: GCTGGCGGATACAATGGAGCATTGTGCCGGAAGTGT...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCGAAGAGATTCTGTaGTTTCTGGGCCACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAAEEIL*FLGHIQ Trigger: CTGGATGTGGCCCAGAAAGCACAGAATCTCTTCGGC...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCAAGGCTTCATCTCTGTaGACCATGGCACCGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SGVVCVLDLVAWQALPTPKASSL*TMAPNT Trigger: GGTGTTCGGTGCCATGGTGCACAGAGATGAAGCCTT...GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACTGCCTGTGCCATTGCTaGCCTGGCTCTGTCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKDLPVANGRTWGHLPDCLCHC*PGSVPL Trigger: CAAAGGGACAGAGCCAGGCCAGCAATGGCACAGGCA...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCGTGTTCTCCTCTGGTTaGAAGCGGAAGTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTILSILPPLQEGATTIPVFSSG*KRKSSM Trigger: CATCGAGGACTTCCGCTTCCAACCAGAGGAGAACAC...GGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGAAAGGATTCCAGCAACACCCCAGAGTCAATACTAGCTGTCACCGCCAGCTAGGAACAGGAACATaGGGATGGCCCAGCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWKGFQQHPRVNTSCHRQLGTGT*GWPSRA Trigger: GGCACGGCTGGGCCATCCCCATGTTCCTGTTCCTAG...CTGGCGGTGACAGCTAGTATTGACTCTGGGGTGTTGCTGGAATCCTTTCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAACATCCAGCACCAGCTaGAACTTCTCAGACACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTATSSTS*NFSDTV Trigger: GACCGTGTCTGAGAAGTTCCAGCTGGTGCTGGATGT...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCCATAGAGCTTCTGCGTaGTCTCAGGTTGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSAHLCPQVVMKVLHALGHRASA*SQVAPT Trigger: TGTGGGTGCAACCTGAGACCACGCAGAAGCTCTATG...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | ATTATTGCCGAAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTTGGAAAGGCATCTCTGTGCACCATaGCACCGAACACCAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIAEDCEDVRSSSQRLERHLCAP*HRTPGV Trigger: AACCCCTGGTGTTCGGTGCCATGGTGCACAGAGATG...CCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTCGGCAATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | GAAGACCCTCTCCCACTTCCTCCCCGACAGTCGTGCTaGGGCCTGTGGCATCACTCACTTCTCTGTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: EDPLPLPPRQSC*GLWHHSLLCHI Trigger: TATGTGACAGAGAAGTGAGTGATGCCACAGGCCCAAGCACGACTGTCGGGGAGGAAGTGGGAGAGGGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| 3UTR CAA 72 bp | GAAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTaGGAAAGGATTCCAGCAACACCCCAGAGTCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: EDCEDVRSSSQR*ERIPATPQSQY Trigger: GTATTGACTCTGGGGTGTTGCTGGAATCCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTTTCCGGAGCTCCTCCTaGAGAAAGTGCTTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGATSLTYCPDPWSVFISFRSSS*RKCFSS Trigger: ACTGGAAAAGCACTTTCTTCAGGAGGAGCTCCGGAA...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGACTGGTTAAGAGGATCCTCTGCCCACCTGTGTCCACAGGTGGTCATGGGGATGGCCCAGCCGTaGCACACAGCATTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSDWLRGSSAHLCPQVVMGMAQP*HTAFMY Trigger: ATACATGAATGCTGTGTGGCACGGCTGGGCCATCCC...CATGACCACCTGTGGACACAGGTGGGCAGAGGATCCTCTTAACCAGTCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGGGATGGCCCAGCCGTaGCACACAGCATTCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMGMAQP*HTAFMY Trigger: ATACATGAATGCTGTGTGGCACGGCTGGGCCATCCC...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGACACTTCCGGCACAATaGTCCATTGTATCCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGTLPAQ*SIVSAS Trigger: GCTGGCGGATACAATGGAGCATTGTGCCGGAAGTGT...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGGTCAGATCTTCCTTTaGGGGTTCCACAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAGQIFL*GFHSFR Trigger: TCTGAAGCTGTGGAACCCGCAAAGGAAGATCTGACC...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGGAGACAAGAGTGGTCCACCTGGGAGATTCACAGGTGGCGTCGTGGTTGCCGAAGAGATTCTGTaGTTTCTGGGCCACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEGDKSGPPGRFTGGVVVAEEIL*FLGHIQ Trigger: CTGGATGTGGCCCAGAAAGCACAGAATCTCTTCGGC...AACCACGACGCCACCTGTGAATCTCCCAGGTGGACCACTCTTGTCTCCTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAAAGGCTTCATCTCTGTaGACCATGGCACCGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPKASSL*TMAPNT Trigger: GGTGTTCGGTGCCATGGTGCACAGAGATGAAGCCTT...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCATGGCGGAGGTGTAGATaGAGTACCAGTCAGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTAVCCGTGSSHNSRVTAWRRCR*STSQIR Trigger: CCTTATCTGACTGGTACTCCATCTACACCTCCGCCA...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTGGCATAGAGCTTCTGCGTaGTCTCAGGTTGCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EAKRQPDDHGVSHLTAGWHRASA*SQVAPT Trigger: TGTGGGTGCAACCTGAGACCACGCAGAAGCTCTATG...CCACCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGACGCTCTCCTCCTTCTaGATGTCTGTGATGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWTLSSF*MSVMSI Trigger: GATGGACATCACAGACATCCAGAAGGAGGAGAGCGT...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTGCCTTTAGCACCTCCTaGATTTTCTGTTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGATSLTYCPDPWSVFISAFSTS*IFCSSS Trigger: CGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGC...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTGGGGTCAGATCTTCCTTTaGGGGTTCCACAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAKRQPDDHGVSHLTAGWGQIFL*GFHSFR Trigger: TCTGAAGCTGTGGAACCCGCAAAGGAAGATCTGACC...CCACCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTGCGTGGTCTCAGGTTaGACCCACATGAACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGCVVSG*THMNKF Trigger: GAACTTGTTCATGTGGGTGCAACCTGAGACCACGCA...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCATGCGTGGTCTCAGGTTaGACCCACATGAACAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPFSPSYHPCRKGPQPFPCVVSG*THMNKF Trigger: GAACTTGTTCATGTGGGTGCAACCTGAGACCACGCA...TGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAGTTCCCCTTCTTGGTaGTGTGAAAGCGTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YHPCRKGPQPFPAMALVESSPSW*CESVQH Trigger: ATGCTGGACGCTTTCACAGCACCAAGAAGGGGAACT...TTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAAAACAGCAATTCCCATaGCTGAGCCAGGGAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLEAKRQPDDHGVSHLTAKQQFP*LSQGGQ Trigger: CTGTCCTCCCTGGCTCAGGCATGGGAATTGCTGTTT...TGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATTCCGGAGCTCCTCCTaGAGAAAGTGCTTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLTTPAGRGHNHSQLFRSSS*RKCFSS Trigger: ACTGGAAAAGCACTTTCTTCAGGAGGAGCTCCGGAA...TAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCACGGGCTTTTCACATACTGGCTaGAAATGGTCTCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHLCPQVVMKVLHALGTGFSHTG*KWSQRL Trigger: AAGCCTTTGAGACCATTTTCAGCCAGTATGTGAAAA...GCCCGTGCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGATGTCGGCCATCTTaGCGAAGAGATTCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLEAKRQPDDHGVSHLTAGCRPS*RRDSVL Trigger: AAGCACAGAATCTCTTCGGCAAGATGGCCGACATCC...TGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACAGTTCCCCTTCTTGGTaGTGTGAAAGCGTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKDLPVANGRTWGHLPDSSPSW*CESVQH Trigger: ATGCTGGACGCTTTCACAGCACCAAGAAGGGGAACT...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCCCTGACCCATGGTCAGTCTTCATCTCTCTTTCCCAAAGAAAGAGACTCCTGGCTCTGTCCCTTTaGTGGCTGCTGAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YCPDPWSVFISLSQRKRLLALSL*WLLRLC Trigger: GCACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAG...GAGTCTCTTTCTTTGGGAAAGAGAGATGAAGACTGACCATGGGTCAGGGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATACTGTGTTCTCCTCTaGTTGGAAGCGGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLTTPAGRGHNHSQLYCVLL*LEAEVL Trigger: GAGGACTTCCGCTTCCAACCAGAGGAGAACACAGTA...TAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAAAGATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACTACTGTGTTCTCCTCTaGTTGGAAGCGGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKDLPVANGRTWGHLPDYCVLL*LEAEVL Trigger: GAGGACTTCCGCTTCCAACCAGAGGAGAACACAGTA...GTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGATCTTTGAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGTGGCGGAGGTGTAGATaGAGTACCAGTCAGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMWRRCR*STSQIR Trigger: CCTTATCTGACTGGTACTCCATCTACACCTCCGCCA...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TGCCGAAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTTGGAAAGGATTCCAAGTTGAAGATTTCGTaGAAGTTCCCCTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRRLRGCPLLQPAVGKDSKLKIS*KFPFLV Trigger: CACCAAGAAGGGGAACTTCCACGAAATCTTCAACTT...GGAATCCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | TCGCACACTGCTAGCGGGCGCTCGTTTTCAGTCAAGTaGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHTASGRSFSVK*KISWKFPFLVL Trigger: CAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGAAAACGAGCGCCCGCTAGCAGTGTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATTTTCCAGATGGCCCTTaGTCTCGTTCAGTCGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSILPPLQEGATTIPSYFPDGP*SRSVDR Trigger: TCGATCGACTGAACGAGATCAAGGGCCATCTGGAAA...ATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATTTCCGGAGCTCCTCCTaGAGAAAGTGCTTTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILSILPPLQEGATTIPSYFRSSS*RKCFSS Trigger: ACTGGAAAAGCACTTTCTTCAGGAGGAGCTCCGGAA...ATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGATGTCGGCCATCTTaGCGAAGAGATTCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILSILPPLQEGATTIPSYGCRPS*RRDSVL Trigger: AAGCACAGAATCTCTTCGGCAAGATGGCCGACATCC...ATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGACATCCAGCACCAGCTaGAACTTCTCAGACACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHNHSQLWLWWKKPLKNRTSSTS*NFSDTV Trigger: GACCGTGTCTGAGAAGTTCCAGCTGGTGCTGGATGT...CCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCAAGTTGAAGATTTCGTaGAAGTTCCCCTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSAHLCPQVVMKVLHALGKLKIS*KFPFLV Trigger: CACCAAGAAGGGGAACTTCCACGAAATCTTCAACTT...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTTCCTATCCAGCCTCCTaGGCATGTTCAGCACGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFSYPAS*ACSARH Trigger: GTGCCGTGCTGAACATGCTCAGGAGGCTGGATAGGA...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCGCAGGCTCCTCCAGATaGTATAGGGGGTGTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: WRMLAPKPSKEPSVKKVCAGSSR*YRGCHT Trigger: AGTATGACACCCCCTATATCATCTGGAGGAGCCTGC...GCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAAGGAGACAAGAGTGGTCCACCTGGGAGATTCACAGGTGGCGTCGTGGTTCGTTTTCAGTCAAGTTaGAGATTTCGTGGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AEGDKSGPPGRFTGGVVVRFQSS*RFRGSS Trigger: GGAACTTCCACGAAATCTTCAACTTGACTGAAAACG...AACCACGACGCCACCTGTGAATCTCCCAGGTGGACCACTCTTGTCTCCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTGGCGTTTTCAGTCAAGTTaGAGATTTCGTGGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAKRQPDDHGVSHLTAGWRFQSS*RFRGSS Trigger: GGAACTTCCACGAAATCTTCAACTTGACTGAAAACG...CCACCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCAAGTTGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTGAAAGCGTGCCTGTGCCATTGCTaGCCTGGCTCTGTCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSQVEDFVEVPLLGAVKACLCHC*PGSVPL Trigger: CAAAGGGACAGAGCCAGGCCAGCAATGGCACAGGCA...CGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGAACACCAGGGGTTTCTaGGTTGATGGTGTAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMNTRGF*VDGVET Trigger: TGTTTCTACACCATCAACCCAGAAACCCCTGGTGTT...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATCATCTCTGTGCACCATaGCACCGAACACCAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHHLCAP*HRTPGV Trigger: AACCCCTGGTGTTCGGTGCCATGGTGCACAGAGATG...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGTCCTATCCAGCCTCCTaGGCATGTTCAGCACGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSVISEQLNTCPDHTIQSYPAS*ACSARH Trigger: GTGCCGTGCTGAACATGCTCAGGAGGCTGGATAGGA...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTCCAGATGGCCCTTaGTCTCGTTCAGTCGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: WRMLAPKPSKEPSVKKVCFPDGP*SRSVDR Trigger: TCGATCGACTGAACGAGATCAAGGGCCATCTGGAAA...GCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | CCACAGGGCAACATAGAGCTTCTGCGTGGTCTCAGGTaGCACCCACATGAACAAGTTCTTGATCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQGNIELLRGLR*HPHEQVLDLFQ Trigger: CTGGAAAAGATCAAGAACTTGTTCATGTGGGTGCAACCTGAGACCACGCAGAAGCTCTATGTTGCCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCAGCTGCCGCAGCATCTCTaGGTTGGTCTCTTCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSVISEQLNTCPDHTIQLPQHL*VGLFSK Trigger: CTTCGAGAAGAGACCAACTCAGAGATGCTGCGGCAG...CTGGATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTCAAGTTGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTGAAAGCGACACTTCCGGCACAATaGTCCATTGTATCCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQVEDFVEVPLLGAVKATLPAQ*SIVSAS Trigger: GCTGGCGGATACAATGGAGCATTGTGCCGGAAGTGT...CGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTGTGTTCTCCTCTGGTTaGAAGCGGAAGTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFVFSSG*KRKSSM Trigger: CATCGAGGACTTCCGCTTCCAACCAGAGGAGAACAC...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| 3UTR CAA 72 bp | AACAAGTTCTTGATCTTTTCCAGGATGTCGGCCATCTaGCCGAAGAGATTCTGTGCTTTCTGGGCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: NKFLIFSRMSAI*PKRFCAFWATS Trigger: GGATGTGGCCCAGAAAGCACAGAATCTCTTCGGCAAGATGGCCGACATCCTGGAAAAGATCAAGAACTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR TCA 90 bp | ATCACACAATCCAGTACAAACCCCAGTGTCTCTGTAAGGATGCCTAGAAGCTACTTTCCAGATGGCCCTTaGTCTCGTTCAGTCGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ITQSSTNPSVSVRMPRSYFPDGP*SRSVDR Trigger: TCGATCGACTGAACGAGATCAAGGGCCATCTGGAAA...GTAGCTTCTAGGCATCCTTACAGAGACACTGGGGTTTGTACTGGATTGTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTAGACTTTATACTGAAATaGAAGAGTACAACCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLTTPAGRGHNHSQLDFILK*KSTTIA Trigger: GGCAATGGTTGTACTCTTTCATTTCAGTATAAAGTC...TAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTTACTGTGTTCTCCTCTaGTTGGAAGCGGAAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFYCVLL*LEAEVL Trigger: GAGGACTTCCGCTTCCAACCAGAGGAGAACACAGTA...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR TCA 90 bp | CACACATACAAAATTGAACATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCGCACGCTCTTTGAGCTaGGGGTCAGTGGGCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTYKIEHSRSVISEQLNTARSLS*GSVGRL Trigger: GAGCCTGCCCACTGACCCTCAGCTCAAAGAGCGTGC...GGTGTTTAATTGCTCACTAATCACTGACCTAGAATGTTCAATTTTGTATGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGTGATTTTCACATACTaGCTGAAAATGGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSILPPLQEGATTIPSYVIFTY*LKMVSK Trigger: CTTTGAGACCATTTTCAGCCAGTATGTGAAAATCAC...ATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| 3UTR CAA 72 bp | TTCTGGATGTCTGTGATGTCCATCAGTTTGATCACCTaGTTCCTCTTTGATGACCCAGACTTGGAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FWMSVMSISLIT*FLFDDPDLELS Trigger: CGAGAGCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGATCAAACTGATGGACATCACAGACATCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCTGGCGGAGGTGTAGATaGAGTACCAGTCAGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSRSVISEQLNTCPDHTIWRRCR*STSQIR Trigger: CCTTATCTGACTGGTACTCCATCTACACCTCCGCCA...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AGAATGCTCGCCCCGAAACCTTCCAAAGAGCCAAGTGTTAAAAAGGTGTGCTTTAACACCAGGGGTTTCTaGGTTGATGGTGTAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RMLAPKPSKEPSVKKVCFNTRGF*VDGVET Trigger: TGTTTCTACACCATCAACCCAGAAACCCCTGGTGTT...AAAGCACACCTTTTTAACACTTGGCTCTTTGGAAGGTTTCGGGGCGAGCATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCCTCTCTCTCTCTGAATaGAGAGTGAGAAGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSRSVISEQLNTCPDHTILSLSE*RVRSNA Trigger: GGCATTGCTTCTCACTCTGCATTCAGAGAGAGAGAG...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR GCA 90 bp | CATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCTGCCCAGATCACACAATCGCCTTTAGCACCTCCTaGATTTTCTGTTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSRSVISEQLNTCPDHTIAFSTS*IFCSSS Trigger: CGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGC...GATTGTGTGATCTGGGCAGGTGTTTAATTGCTCACTAATCACTGACCTAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CCA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATAAGACTTTATACTTCTaGATGTCTGTGATGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHKTLYF*MSVMSI Trigger: GATGGACATCACAGACATCCAGAAGTATAAAGTCTT...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS CCA 90 bp | ACCAGCAGGGTCCCTGAGCTCCTCACTGTCCCGGGGCGAGGGCCGTaGCGTCTTCAGGGGGATCTCGTCTCCGCACTCGGTGTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSRVPELLTVPGRGP*RLQGDLVSALGVRG Trigger: GCCTCGGACACCGAGTGCGGAGACGAGATCCCCCTGAAGACGCCACGGCCCTCGCCCCGGGACAGTGAGGAGCTCAGGGACCCTGCTGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS GCA 90 bp | CACGGGAGGCCAAGCCCTGGCTGCGGCGCTCTGTGCCTGTGCCATTaGTGGCCTGGCTCTGTCCCTTTGGTGGCTGCTGAGGCTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HGRPSPGCGALCLCH*WPGSVPLVAAEAVL Trigger: CAGCACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS CCA 90 bp | GGGAGGCCAAGCCCTGGCTGCGGCGCTCTGTGCCTGTGCCATTGCTaGCCTGGCTCTGTCCCTTTGGTGGCTGCTGAGGCTGTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRPSPGCGALCLCHC*PGSVPLVAAEAVLA Trigger: AGCCAGCACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS TCA 90 bp | CTCCTGAGCATGTTCAGCACGGCACTCCTCGGCCTCACCTGGACATaGCGGGGAGGCTCCCTTCCAGACAGGCCTTTGTCCCAGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSMFSTALLGLTWT*RGGSLPDRPLSQGL Trigger: CAGACCCTGGGACAAAGGCCTGTCTGGAAGGGAGCCTCCCCGTCATGTCCAGGTGAGGCCGAGGAGTGCCGTGCTGAACATGCTCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCCCTGGCTCTGTCCCTTaGGTGGCTGCTGAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGSSHNSRVTAAWRPNAPGSVP*VAAEAV Trigger: CACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAGG...GGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGTCTGTGCCTGTGCCATaGCTGGCCTGGCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRPRPARSPTCEVSTFVGSVPVP*LAWLCP Trigger: GGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGA...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS GCA 90 bp | ACCTCTCATAGAACCACTTCTGTACACGGGAGGCCAAGCCCTGGCTaGGGCGCTCTGTGCCTGTGCCATTGCTGGCCTGGCTCTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSHRTTSVHGRPSPG*GALCLCHCWPGSVP Trigger: AGGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGAGCGCCGCAGCCAGGGCTTGGCCTCCCGTGTACAGAAGTGGTTCTATGAGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS GCA 90 bp | CTCGTTCAGTCGATCGAACTCTGTCCTGTTGAAGTCCTGCACGCCTaGCGCCATGATGAGGGTCCCTGGACCAGCAGGGTCCCTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVQSIELCPVEVLHA*RHDEGPWTSRVPEL Trigger: GAGCTCAGGGACCCTGCTGGTCCAGGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGATCGACTGAACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS CCA 90 bp | GGCGCTGCCGCTCCCGATCCAGCTCCTGCCGCAGCATCTCTGAGTTaGTCTCTTCTCGAAGCTTCCGGAGCTCCTCCTGAAGAAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAAAPDPAPAAASLS*SLLEASGAPPEESA Trigger: AGCACTTTCTTCAGGAGGAGCTCCGGAAGCTTCGAGAAGAGACCAACTCAGAGATGCTGCGGCAGGAGCTGGATCGGGAGCGGCAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCTGGCAAGCCCTTCCCACCCCCAGTGTGTGGCCTGAAGTCCCCTGGGAATCGGTGTCCGAGGCATTaGGGGACTCGGCTAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPGKPFPPPVCGLKSPGNRCPRH*GTRLDQ Trigger: TTGATCTAGCCGAGTCCCCAAATGCCTCGGACACCG...ATTCCCAGGGGACTTCAGGCCACACACTGGGGGTGGGAAGGGCTTGCCAGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCTCTGTGCCTGTGCCATaGCTGGCCTGGCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAHLCPQVVMKVLHALGSVPVP*LAWLCP Trigger: GGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGA...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS GCA 90 bp | CCCTTGATCTCGTTCAGTCGATCGAACTCTGTCCTGTTGAAGTCCTaGACGCCTGCCGCCATGATGAGGGTCCCTGGACCAGCAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLISFSRSNSVLLKS*TPAAMMRVPGPAGS Trigger: GGACCCTGCTGGTCCAGGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGATCGACTGAACGAGATCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS GCA 90 bp | GCCTTTAGCACCTCCTGCATTTTCTGTTCCAGTTCGATCCGGCGCTaGCGCTCCCGATCCAGCTCCTGCCGCAGCATCTCTGAGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFSTSCIFCSSSIRR*RSRSSSCRSISELV Trigger: GACCAACTCAGAGATGCTGCGGCAGGAGCTGGATCGGGAGCGGCAGCGCCGGATCGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS CCA 90 bp | GTCCCTTTGGTGGCTGCTGAGGCTGTGCTGGCTGCTCCTCGGACCTaGCCTTTAGCACCTCCTGCATTTTCTGTTCCAGTTCGATCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPLVAAEAVLAAPRT*PLAPPAFSVPVRSG Trigger: GCCGGATCGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGCCAGGTCCGAGGAGCAGCCAGCACAGCCTCAGCAGCCACCAAAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGCGGTCAGATCTTCCTTaGCGGGTTCCACAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRPRPARSPTCEVSTFVGRSDLP*RVPQLQ Trigger: CTGAAGCTGTGGAACCCGCAAAGGAAGATCTGACCG...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCTCCCATAACTCCAGAGTGACTGCAGCCTGGAGGCCAAACGCCAGCCAGGAAAGAGTACAACCATaGCCACCGGGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSHNSRVTAAWRPNASQERVQP*PPGHQL Trigger: AAGCTGGTGGCCCGGTGGCAATGGTTGTACTCTTTC...CTGGCTGGCGTTTGGCCTCCAGGCTGCAGTCACTCTGGAGTTATGGGAGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTACTTCCAGACAGGCCTTaGTCCCAGGGTCTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSLHLTTPAGRGHNHSQLLPDRP*SQGLGL Trigger: CAGCCCCAGACCCTGGGACAAAGGCCTGTCTGGAAG...TAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCCGGTGTCCGAGGCATTaGGGGACTCGGCTAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSAHLCPQVVMKVLHALGRCPRH*GTRLDQ Trigger: TTGATCTAGCCGAGTCCCCAAATGCCTCGGACACCG...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGTCGAACTCTGTCCTGTaGAAGTCCTGCACGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTTPAGRGHNHSQLWLWWSNSVL*KSCTPA Trigger: GGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGA...CCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCCCAGGCCTGCAAGATCGCCCACCTGTGAAGTCTCCACCTTTGTCGGGATTTCCAGATGGCCCTaGATCTCGTTCAGTCGATCG | + |
|
Preference number: 5 (lower is better) Translates to: QRPRPARSPTCEVSTFVGISRWP*ISFSRS Trigger: CGATCGACTGAACGAGATCAAGGGCCATCTGGAAAT...CCCGACAAAGGTGGAGACTTCACAGGTGGGCGATCTTGCAGGCCTGGGCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATCCTGGCTCTGTCCCTTaGGTGGCTGCTGAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILSILPPLQEGATTIPSYPGSVP*VAAEAV Trigger: CACAGCCTCAGCAGCCACCAAAGGGACAGAGCCAGG...ATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGTGGTATGTGTGCTTGATCTGGTTGCCTGGCAAGCCCTTCCCACCCCCCGCAGCATCTCTGAGTaGGTCTCTTCTCGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVCVLDLVAWQALPTPRSISE*VSSRSF Trigger: GAAGCTTCGAGAAGAGACCAACTCAGAGATGCTGCG...GGGGGTGGGAAGGGCTTGCCAGGCAACCAGATCAAGCACACATACCACTCCAGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CCCACAGCTGTCTGCTGTGGCACAGGGTCCTCCCATAACTCCAGAGTGACTGCATGTGTTCTCCTCTGGTaGGAAGCGGAAGTCCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTAVCCGTGSSHNSRVTACVLLW*EAEVLD Trigger: ATCGAGGACTTCCGCTTCCAACCAGAGGAGAACACA...TGCAGTCACTCTGGAGTTATGGGAGGACCCTGTGCCACAGCAGACAGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTAAGTTAGTGACAGGCTaGGCACCGCGCTTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ICRWLMVELGATSLTYCPKLVTG*APRFSL Trigger: AAGACTGAAGCGCGGTGCCAAGCCTGTCACTAACTT...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGGGCCACCTCCCTGACCTACTGCCCTGACCCATGGTCAGTCTTCATCTCTAAGTTAGTGACAGGCTaGGCACCGCGCTTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGATSLTYCPDPWSVFISKLVTG*APRFSL Trigger: AAGACTGAAGCGCGGTGCCAAGCCTGTCACTAACTT...AGAGATGAAGACTGACCATGGGTCAGGGCAGTAGGTCAGGGAGGTGGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS TCA 90 bp | TTTGTCCCAGGGTCTGGGGCTGGCATCCAGAGAGGCTCCTGTAGGTaGGCTCTCTCTCTCTCTGAATGCAGAGTGAGAAGCAATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FVPGSGAGIQRGSCR*ALSLSECRVRSNAH Trigger: ATGGGCATTGCTTCTCACTCTGCATTCAGAGAGAGAGAGAGCTCACCTACAGGAGCCTCTCTGGATGCCAGCCCCAGACCCTGGGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
||
| CDS-3UTR CAA 90 bp | CCCACCATTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCATTTCCAGATGGCCCTaGATCTCGTTCAGTCGATCG | + |
|
Preference number: 5 (lower is better) Translates to: PTILSILPPLQEGATTIPISRWP*ISFSRS Trigger: CGATCGACTGAACGAGATCAAGGGCCATCTGGAAAT...GGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAATGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAACGCAGCATCTCTGAGTaGGTCTCTTCTCGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YHPCRKGPQPFPAMALVERSISE*VSSRSF Trigger: GAAGCTTCGAGAAGAGACCAACTCAGAGATGCTGCG...TTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAAGTTAGTGACAGGCTaGGCACCGCGCTTCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YHPCRKGPQPFPAMALVEKLVTG*APRFSL Trigger: AAGACTGAAGCGCGGTGCCAAGCCTGTCACTAACTT...TTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCGGTGGCTAATGGTAGAACTTGGGGCCACCTCCCTGACCTACTGCCCTGGGACAACCTCAGAATaGCTAGGAACAGGAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: ICRWLMVELGATSLTYCPGTTSE*LGTGTW Trigger: CCATGTTCCTGTTCCTAGCAATTCTGAGGTTGTCCC...AGGGCAGTAGGTCAGGGAGGTGGCCCCAAGTTCTACCATTAGCCACCGGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGCTGCGTGGTCTCAGGTaGCACCCACATGAACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGLRGLR*HPHEQV Trigger: AACTTGTTCATGTGGGTGCAACCTGAGACCACGCAG...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGCCCACCTGTGTCCACAGGTGGTCATGAAGGTGCTTCATGCGCTTGGCTCACCTTGTTCCTCTTaGATGACCCAGACTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAHLCPQVVMKVLHALGSPCSS*MTQTWS Trigger: GCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGA...GCCAAGCGCATGAAGCACCTTCATGACCACCTGTGGACACAGGTGGGCAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | GATGGTGTAGAAACAGCAATTCCCATGCCTGAGCCAGGGAGGACAGACAAGACTCGGTGTCCGAGGCATTaGGGGACTCGGCTAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: DGVETAIPMPEPGRTDKTRCPRH*GTRLDQ Trigger: TTGATCTAGCCGAGTCCCCAAATGCCTCGGACACCG...AGTCTTGTCTGTCCTCCCTGGCTCAGGCATGGGAATTGCTGTTTCTACACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATTCTGTGCCTGTGCCATaGCTGGCCTGGCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHSVPVP*LAWLCP Trigger: GGGACAGAGCCAGGCCAGCAATGGCACAGGCACAGA...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGTGGGGGACAACCTCAGAATaGCTAGGAACAGGAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: EAKRQPDDHGVSHLTAGWGTTSE*LGTGTW Trigger: CCATGTTCCTGTTCCTAGCAATTCTGAGGTTGTCCC...CCACCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | CACAGCCTCGGAGTGCCCACAGCAGGTCCAACGTGGAAGGAGGGTCTGAGGGCTTCGTTTTCAGTCAAGTaGAAGATTTCGTGGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: HSLGVPTAGPTWKEGLRASFSVK*KISWKF Trigger: GAACTTCCACGAAATCTTCAACTTGACTGAAAACGA...AGCCCTCAGACCCTCCTTCCACGTTGGACCTGCTGTGGGCACTCCGAGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | CATGTGAGTTCCAGCCCTTCTGGTCTGCAGAGCCTAGGCCAATATAACCAGCCATGTGTTCTCCTCTGGTaGGAAGCGGAAGTCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: HVSSSPSGLQSLGQYNQPCVLLW*EAEVLD Trigger: ATCGAGGACTTCCGCTTCCAACCAGAGGAGAACACA...TGGCTGGTTATATTGGCCTAGGCTCTGCAGACCAGAAGGGCTGGAACTCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTCCATCTTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGTCACCTTGTTCCTCTTaGATGACCCAGACTTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: FSPSYHPCRKGPQPFPAMSPCSS*MTQTWS Trigger: GCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGA...CATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAAGATGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS TCA 90 bp | AGCATCTCTGAGTTGGTCTCTTCTCGAAGCTTCCGGAGCTCCTCCTaGAGAAAGTGCTTTTCCAGTAAGGCGATTTCCAGATGGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SISELVSSRSFRSSS*RKCFSSKAISRWPL Trigger: CAAGGGCCATCTGGAAATCGCCTTACTGGAAAAGCACTTTCTTCAGGAGGAGCTCCGGAAGCTTCGAGAAGAGACCAACTCAGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS TCA 90 bp | GCAATTCCCATGCCTGAGCCAGGGAGGACAGACAAGACTTTATACTaGAATGAAAGAGTACAACCATTGCCACCGGGCCACCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: AIPMPEPGRTDKTLY*NERVQPLPPGHQLL Trigger: GAGAAGCTGGTGGCCCGGTGGCAATGGTTGTACTCTTTCATTTCAGTATAAAGTCTTGTCTGTCCTCCCTGGCTCAGGCATGGGAATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | GGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGGACAACCTCAGAATaGCTAGGAACAGGAACATGG | + |
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Preference number: 5 (lower is better) Translates to: GHNHSQLWLWWKKPLKNRGTTSE*LGTGTW Trigger: CCATGTTCCTGTTCCTAGCAATTCTGAGGTTGTCCC...CCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | AACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCATCGGTCAGATCTTCCTTaGCGGGTTCCACAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: NHSQLWLWWKKPLKNRGHRSDLP*RVPQLQ Trigger: CTGAAGCTGTGGAACCCGCAAAGGAAGATCTGACCG...ATGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | ATTATTGCCGAAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTTGGAAAGGAGTCTTGGGCAGCGTTaGAAGATGAAGTCAATTAAG | + |
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Preference number: 5 (lower is better) Translates to: IIAEDCEDVRSSSQRLERSLGQR*KMKSIK Trigger: CTTAATTGACTTCATCTTCAAACGCTGCCCAAGACT...CCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTCGGCAATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | TTACCACCCCTGCAGGAAGGGGCCACAACCATTCCCAGCTATGGCTTTGGTGGAAGTCTTGGGCAGCGTTaGAAGATGAAGTCAATTAAG | + |
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Preference number: 5 (lower is better) Translates to: LPPLQEGATTIPSYGFGGSLGQR*KMKSIK Trigger: CTTAATTGACTTCATCTTCAAACGCTGCCCAAGACT...TCCACCAAAGCCATAGCTGGGAATGGTTGTGGCCCCTTCCTGCAGGGGTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCCAAACGCCAGCCAGATGACCATGGAGTCTCTCACTTAACAGCAGGGATCAGTTTGATCACCTaGTTCCTCTTTGATGACCCA | + |
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Preference number: 5 (lower is better) Translates to: LEAKRQPDDHGVSHLTAGISLIT*FLFDDP Trigger: TGGGTCATCAAAGAGGAACAAGGTGATCAAACTGAT...CCCTGCTGTTAAGTGAGAGACTCCATGGTCATCTGGCTGGCGTTTGGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | ATTATTGCCGAAGACTGCGAGGATGTCCGCTCCTCCAGCCAGCGGTTGGAAAGGTCGTTTTCAGTCAAGTaGAAGATTTCGTGGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IIAEDCEDVRSSSQRLERSFSVK*KISWKF Trigger: GAACTTCCACGAAATCTTCAACTTGACTGAAAACGA...CCTTTCCAACCGCTGGCTGGAGGAGCGGACATCCTCGCAGTCTTCGGCAATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | TTCAGTCAAGTTGAAGATTTCGTGGAAGTTCCCCTTCTTGGTGCTGTGAAAGCGTGTGTTCTCCTCTGGTaGGAAGCGGAAGTCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: FSQVEDFVEVPLLGAVKACVLLW*EAEVLD Trigger: ATCGAGGACTTCCGCTTCCAACCAGAGGAGAACACA...CGCTTTCACAGCACCAAGAAGGGGAACTTCCACGAAATCTTCAACTTGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123349.2 |
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| CDS-3UTR CAA 90 bp | CAACCATTCCCAGCTATGGCTTTGGTGGAAAAAGCCTCTGAAGAACAGGGGTCAATCAGTTTGATCACCTaGTTCCTCTTTGATGACCCA | + |
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Preference number: 5 (lower is better) Translates to: QPFPAMALVEKASEEQGSISLIT*FLFDDP Trigger: TGGGTCATCAAAGAGGAACAAGGTGATCAAACTGAT...TGACCCCTGTTCTTCAGAGGCTTTTTCCACCAAAGCCATAGCTGGGAATGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088931.10 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | CACACATACAAAATTGAACATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCCGCAGCATCTCTGAGTaGGTCTCTTCTCGAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTYKIEHSRSVISEQLNTRSISE*VSSRSF Trigger: GAAGCTTCGAGAAGAGACCAACTCAGAGATGCTGCG...GGTGTTTAATTGCTCACTAATCACTGACCTAGAATGTTCAATTTTGTATGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS-3UTR CAA 90 bp | CACACATACAAAATTGAACATTCTAGGTCAGTGATTAGTGAGCAATTAAACACCATTTCCAGATGGCCCTaGATCTCGTTCAGTCGATCG | + |
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Preference number: 5 (lower is better) Translates to: HTYKIEHSRSVISEQLNTISRWP*ISFSRS Trigger: CGATCGACTGAACGAGATCAAGGGCCATCTGGAAAT...GGTGTTTAATTGCTCACTAATCACTGACCTAGAATGTTCAATTTTGTATGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CCA 72 bp | GTCCCTGAGCTCCTCACTGTCCCGGGGCGAGGGCCGTaGCGTCTTCAGGGGGATCTCGTCTCCGCACTCGGT | + |
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Preference number: 6 (lower is better) Translates to: VPELLTVPGRGP*RLQGDLVSALG Trigger: ACCGAGTGCGGAGACGAGATCCCCCTGAAGACGCCACGGCCCTCGCCCCGGGACAGTGAGGAGCTCAGGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS TCA 72 bp | ATGTTCAGCACGGCACTCCTCGGCCTCACCTGGACATaGCGGGGAGGCTCCCTTCCAGACAGGCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: MFSTALLGLTWT*RGGSLPDRPLS Trigger: GGACAAAGGCCTGTCTGGAAGGGAGCCTCCCCGTCATGTCCAGGTGAGGCCGAGGAGTGCCGTGCTGAACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
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| CDS GCA 72 bp | GCTGGCTGCTCCTCGGACCTGGCCTTTAGCACCTCCTaGATTTTCTGTTCCAGTTCGATCCGGCGCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AGCSSDLAFSTS*IFCSSSIRRCR Trigger: GCGGCAGCGCCGGATCGAACTGGAACAGAAAATGCAGGAGGTGCTAAAGGCCAGGTCCGAGGAGCAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 72 bp | GGGGGATCTCGTCTCCGCACTCGGTGTCCGAGGCATTaGGGGACTCGGCTAGATCAAGGAGGTCCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGSRLRTRCPRH*GTRLDQGGPLS Trigger: AGAGAGAGGACCTCCTTGATCTAGCCGAGTCCCCAAATGCCTCGGACACCGAGTGCGGAGACGAGATCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 90 bp | GCGTCTTCAGGGGGATCTCGTCTCCGCACTCGGTGTCCGAGGCATTaGGGGACTCGGCTAGATCAAGGAGGTCCTCTCTCTTGTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASSGGSRLRTRCPRH*GTRLDQGGPLSCVL Trigger: GAGGACACAAGAGAGAGGACCTCCTTGATCTAGCCGAGTCCCCAAATGCCTCGGACACCGAGTGCGGAGACGAGATCCCCCTGAAGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CCA 72 bp | GCTCCCGATCCAGCTCCTGCCGCAGCATCTCTGAGTTaGTCTCTTCTCGAAGCTTCCGGAGCTCCTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: APDPAPAAASLS*SLLEASGAPPE Trigger: TTCAGGAGGAGCTCCGGAAGCTTCGAGAAGAGACCAACTCAGAGATGCTGCGGCAGGAGCTGGATCGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 90 bp | TCCAGATGGCCCTTGATCTCGTTCAGTCGATCGAACTCTGTCCTGTaGAAGTCCTGCACGCCTGCCGCCATGATGAGGGTCCCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: SRWPLISFSRSNSVL*KSCTPAAMMRVPGP Trigger: TGGTCCAGGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGATCGACTGAACGAGATCAAGGGCCATCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS TCA 72 bp | GGGTCTGGGGCTGGCATCCAGAGAGGCTCCTGTAGGTaGGCTCTCTCTCTCTCTGAATGCAGAGTGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GSGAGIQRGSCR*ALSLSECRVRS Trigger: GCTTCTCACTCTGCATTCAGAGAGAGAGAGAGCTCACCTACAGGAGCCTCTCTGGATGCCAGCCCCAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088931.10 |
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| CDS GCA 72 bp | TCGTTCAGTCGATCGAACTCTGTCCTGTTGAAGTCCTaGACGCCTGCCGCCATGATGAGGGTCCCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: SFSRSNSVLLKS*TPAAMMRVPGP Trigger: TGGTCCAGGGACCCTCATCATGGCGGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGATCGACTGAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 72 bp | CCCTTGATCTCGTTCAGTCGATCGAACTCTGTCCTGTaGAAGTCCTGCACGCCTGCCGCCATGATGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PLISFSRSNSVL*KSCTPAAMMRV Trigger: GACCCTCATCATGGCGGCAGGCGTGCAGGACTTCAACAGGACAGAGTTCGATCGACTGAACGAGATCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 90 bp | TCCGAGGCATTTGGGGACTCGGCTAGATCAAGGAGGTCCTCTCTCTaGTGTCCTCTGAACCTGATCCTATCCAGCCTCCTGAGCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SEAFGDSARSRRSSL*CPLNLILSSLLSMF Trigger: GAACATGCTCAGGAGGCTGGATAGGATCAGGTTCAGAGGACACAAGAGAGAGGACCTCCTTGATCTAGCCGAGTCCCCAAATGCCTCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CCA 72 bp | GCTAGTCCCCACTCGTCCAGGACGCTCTCCTCCTTCTaGATGTCTGTGATGTCCATCAGTTTGATCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: ASPHSSRTLSSF*MSVMSISLITL Trigger: CAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGGAGGAGAGCGTCCTGGACGAGTGGGGACTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
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| CDS CCA 72 bp | ACAACCTCAGAATTGCTAGGAACAGGAACATGGGGATaGCCCAGCCGTGCCACACAGCATTCATGTATACCG | + |
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Preference number: 6 (lower is better) Translates to: TTSELLGTGTWG*PSRATQHSCIP Trigger: CGGTATACATGAATGCTGTGTGGCACGGCTGGGCCATCCCCATGTTCCTGTTCCTAGCAATTCTGAGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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| CDS CAA 90 bp | TCCAGGACGCTCTCCTCCTTCTGGATGTCTGTGATGTCCATCAGTTaGATCACCTTGTTCCTCTTTGATGACCCAGACTTGGAGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SRTLSSFWMSVMSIS*ITLFLFDDPDLELS Trigger: CGAGAGCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGGAGGAGAGCGTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
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| CDS CAA 90 bp | CTCTCCTCCTTCTGGATGTCTGTGATGTCCATCAGTTTGATCACCTaGTTCCTCTTTGATGACCCAGACTTGGAGCTCTCGAAGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSFWMSVMSISLIT*FLFDDPDLELSKHR Trigger: CCTGTGCTTCGAGAGCTCCAAGTCTGGGTCATCAAAGAGGAACAAGGTGATCAAACTGATGGACATCACAGACATCCAGAAGGAGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138134.8 |
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| CDS CAA 72 bp | AAGTGCTTTTCCAGTAAGGCGATTTCCAGATGGCCCTaGATCTCGTTCAGTCGATCGAACTCTGTCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KCFSSKAISRWP*ISFSRSNSVLL Trigger: CAACAGGACAGAGTTCGATCGACTGAACGAGATCAAGGGCCATCTGGAAATCGCCTTACTGGAAAAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088931.10 ENSMUST00000123349.2 ENSMUST00000138134.8 |
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