Pregenerated sensors for GRAMD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074259Ensembl transcript IDs: ENSMUST00000098661.10, ENSMUST00000123914.8, ENSMUST00000128944.8, ENSMUST00000129129.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGACTTGGCATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATaGCCCTGTACTCTCGCCCCTCAGCAGGGACCAGGGAGGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: VTWHEPWLNLARLRE*PCTLAPQQGPGRES Trigger: GCTTTCCCTCCCTGGTCCCTGCTGAGGGGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATGCCAAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | GGAATGAGTGAGCTCTGCCAAGAAGGGCCCAACACTGCTGGATCTTaGAGCTGGATCCCACTGCCCAGTCAAGCCACCCTGACCAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: GMSELCQEGPNTAGS*SWIPLPSQATLTSA Trigger: TGCACTGGTCAGGGTGGCTTGACTGGGCAGTGGGATCCAGCTGCAAGATCCAGCAGTGTTGGGCCCTTCTTGGCAGAGCTCACTCATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | AGCTCGAGAACAAAGATTCTGAGAGGCCCAAGTGTGATCCCAGAATaGTGGGAGGCAGCAGAGCCCGCAGAGGTGGGAACACCCTATCCC | + |
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Preference number: 1 (lower is better) Translates to: SSRTKILRGPSVIPE*WEAAEPAEVGTPYP Trigger: GGGATAGGGTGTTCCCACCTCTGCGGGCTCTGCTGCCTCCCAGCATTCTGGGATCACACTTGGGCCTCTCAGAATCTTTGTTCTCGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR TCA 90 bp | CTGCTGGATCTTGCAGCTGGATCCCACTGCCCAGTCAAGCCACCCTaGCCAGTGCAGTCGACCATGGAGGAAGTATACCAACCACTAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLDLAAGSHCPVKPP*PVQSTMEEVYQPLE Trigger: CTCTAGTGGTTGGTATACTTCCTCCATGGTCGACTGCACTGGTCAGGGTGGCTTGACTGGGCAGTGGGATCCAGCTGCAAGATCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | CCTGACCTGCAGGGGGCATCTTCCCAAATTCAGCTAGACAGCTCTTaGAGGGCCAGCCCAGAGTCATCCAGCTCAGCTCAGAAAACTAAG | + |
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Preference number: 1 (lower is better) Translates to: PDLQGASSQIQLDSS*RASPESSSSAQKTK Trigger: CTTAGTTTTCTGAGCTGAGCTGGATGACTCTGGGCTGGCCCTGCAAGAGCTGTCTAGCTGAATTTGGGAAGATGCCCCCTGCAGGTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | TCCTACAGCATGTTGGCACAGCCACTTGTGACTTGGCATGAACCCTaGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGTACTCTCGCC | + |
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Preference number: 1 (lower is better) Translates to: SYSMLAQPLVTWHEP*LNLARLREWPCTLA Trigger: GGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATGCCAAGTCACAAGTGGCTGTGCCAACATGCTGTAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | GGAGAATGGGCTTCCTACAGCATGTTGGCACAGCCACTTGTGACTTaGCATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATGGCCC | + |
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Preference number: 1 (lower is better) Translates to: GEWASYSMLAQPLVT*HEPWLNLARLREWP Trigger: GGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATGCCAAGTCACAAGTGGCTGTGCCAACATGCTGTAGGAAGCCCATTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR TCA 90 bp | ATGGGCTTCCTACAGCATGTTGGCACAGCCACTTGTGACTTGGCATaGACCCTGGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: MGFLQHVGTATCDLA*TLAQPSKAQRMALY Trigger: GTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATGCCAAGTCACAAGTGGCTGTGCCAACATGCTGTAGGAAGCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | CACACAGCTCCTCTAGAGGAGCAGAGAGAGGACCCTCCAGAGGCATaGACACACCCATATCACTCAAAGCTCTGGCTTCAAGGCTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: HTAPLEEQREDPPEA*THPYHSKLWLQGSL Trigger: AAGAGAGCCTTGAAGCCAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGCTCCTCTAGAGGAGCTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | AGCCTTCTCAAAGGTCCTAGTGCCTGGCTCCCTGAAGAAAAGTCCTaGGAGCTCGAGAACAAAGATTCTGAGAGGCCCAAGTGTGATCCC | + |
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Preference number: 1 (lower is better) Translates to: SLLKGPSAWLPEEKS*ELENKDSERPKCDP Trigger: GGGATCACACTTGGGCCTCTCAGAATCTTTGTTCTCGAGCTCGCAGGACTTTTCTTCAGGGAGCCAGGCACTAGGACCTTTGAGAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | AGCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTGCCCTGCAGCTTaGCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTACA | + |
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Preference number: 1 (lower is better) Translates to: SSGFKALFKISCPAA*LLPLQPCLENGLPT Trigger: TGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | AAATCAGCTGCCCTGCAGCTTGCCTCTTGCCCTTGCAGCCTTGTTTaGAGAATGGGCTTCCTACAGCATGTTGTTTGGAGAACGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KSAALQLASCPCSLV*RMGFLQHVVWRTGF Trigger: GAAGCCCGTTCTCCAAACAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR TCA 90 bp | TACAGAGTGTCCAATAGCATATGGACTGCAGGTCCATGGAATGAGTaGGCTCTGCCAAGAAGGGCCCAACACTGCTGGATCTTGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: YRVSNSIWTAGPWNE*ALPRRAQHCWILQL Trigger: CAGCTGCAAGATCCAGCAGTGTTGGGCCCTTCTTGGCAGAGCTCACTCATTCCATGGACCTGCAGTCCATATGCTATTGGACACTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | GAGCTCTCTTCTCCACATCCCAGCCTTCTCAAAGGTCCTAGTGCCTaGCTCCCTGAAGAAAAGTCCTGCGAGCTCGAGAACAAAGATTCT | + |
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Preference number: 1 (lower is better) Translates to: ELSSPHPSLLKGPSA*LPEEKSCELENKDS Trigger: AGAATCTTTGTTCTCGAGCTCGCAGGACTTTTCTTCAGGGAGCCAGGCACTAGGACCTTTGAGAAGGCTGGGATGTGGAGAAGAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | CCACCTCCTCATCTTCTCCTCAAGGGAGTCAGAGATCTCTTTTCCTaGTCTCTGCCTGGAGCCTATCCCATCTGGGACACTTCTACCTTA | + |
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Preference number: 1 (lower is better) Translates to: PPPHLLLKGVRDLFS*SLPGAYPIWDTSTL Trigger: TAAGGTAGAAGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAGATCTCTGACTCCCTTGAGGAGAAGATGAGGAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR TCA 90 bp | TCACCCACTGTCCCTCTCTCCAGTACTGCTTGGATTTGTCCTGAATaGGACAAACAGCCCTGCAATCATTTCCACCAGGGTTTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SPTVPLSSTAWICPE*DKQPCNHFHQGFLP Trigger: GGGAAGGAAACCCTGGTGGAAATGATTGCAGGGCTGTTTGTCTCATTCAGGACAAATCCAAGCAGTACTGGAGAGAGGGACAGTGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | CATATCACTCAAAGCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTaGCCTGCAGCTTGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: HITQSSGFKALFKIS*PAACLLPLQPCLEN Trigger: ATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCTTTGAGTGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 90 bp | AAGATAAGTAGATGGGGAAGATTCTTTATGACAAAACCATCAGTGTaGACTGATCTCACCACCTCCTCATCTTCTCCTCAAGGGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KISRWGRFFMTKPSV*TDLTTSSSSPQGSQ Trigger: CTGACTCCCTTGAGGAGAAGATGAGGAGGTGGTGAGATCAGTGCACACTGATGGTTTTGTCATAAAGAATCTTCCCCATCTACTTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 90 bp | GAGTATTGTTTCCATGACGATAAGATGGGAAAGAGTGATGGAGGATaGTTAAGACAAAAGGATGGAAGTGCATTAAAGGATGGGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: EYCFHDDKMGKSDGG*LRQKDGSALKDGHW Trigger: CCAGTGCCCATCCTTTAATGCACTTCCATCCTTTTGTCTTAACCATCCTCCATCACTCTTTCCCATCTTATCGTCATGGAAACAATACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAGAGGACCCTCCAGAGGCATGGACACACCCATATCACTCAAAGCTCTGATGGGCATTGGAGGATaGGCACTGGAGGATGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: AERGPSRGMDTPISLKALMGIGG*ALEDGH Trigger: GTGCCCATCCTCCAGTGCCCATCCTCCAATGCCCAT...CAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR TCA 90 bp | CATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGTACTCTCGCCTGCAGGTCCATGGAATaGGTGAGCTCTGCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HEPWLNLARLREWPCTLACRSME*VSSAKK Trigger: CTTCTTGGCAGAGCTCACTCATTCCATGGACCTGCA...GGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTGCCCTGCAGCTTGCCTCTTGCATGGGCATTGGAGGATaGGCACTGGAGGATGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: ALASRLSSKSAALQLASCMGIGG*ALEDGH Trigger: ATGCCCATCCTCCAGTGCCCATCCTCCAATGCCCAT...GCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAGAGGACCCTCCAGAGGCATGGACACACCCATATCACTCAAAGCTCTGCCAAAATGGGAGTTCTaGGACCTCCAATCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AERGPSRGMDTPISLKALPKWEF*DLQSQP Trigger: GGGCTGAGATTGGAGGTCCCAGAACTCCCATTTTGG...CAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | AAGCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTGCCCTGCAGCTaGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: KLWLQGSLQNQLPCS*PLALAALFGEWASY Trigger: GTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTGCCAAGAAGGGCCCAACACTGCTGGATCTTGCAGCTGGATCCCACTGCGCAACCAATGGGAACTaGCTTACTACTGAATACCAC | + |
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Preference number: 2 (lower is better) Translates to: SSAKKGPTLLDLAAGSHCATNGN*LTTEYH Trigger: GTGGTATTCAGTAGTAAGTCAGTTCCCATTGGTTGC...GCAGTGGGATCCAGCTGCAAGATCCAGCAGTGTTGGGCCCTTCTTGGCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | AAAATCAGCTGCCCTGCAGCTTGCCTCTTGCCCTTGCAGCCTTGTTaGGAGAATGGGCTTCCTACAGCATGTTGTTTGGAGAACGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: KISCPAACLLPLQPC*ENGLPTACCLENGL Trigger: AAGCCCGTTCTCCAAACAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGAGAGGACCCTCCAGAGGCATGGACACACCCATATCACTCAAAGCTCTGTGCTTGGATTTGTCCTaGATGAGACAAACAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AERGPSRGMDTPISLKALCLDLS*MRQTAL Trigger: CAGGGCTGTTTGTCTCATTCAGGACAAATCCAAGCA...CAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | TCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAATCCTaGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SYSVSAQPQYKPQES*VETAPRASLHKVWD Trigger: ATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAAGGATTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
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| 3UTR-3UTR TCA 90 bp | CATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGTACTCTCGCCGGGGAAGATTCTTTATaGCAAAACCATCAGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: HEPWLNLARLREWPCTLAGEDSL*QNHQCA Trigger: TGCACACTGATGGTTTTGTCATAAAGAATCTTCCCC...GGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR GCA 90 bp | GATTACTGGAATCCTACAGAGTGTCCAATAGCATATGGACTGCAGGTCCATGGACAGCTAGACAGCTCTTaGAGGGCCAGCCCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DYWNPTECPIAYGLQVHGQLDSS*RASPES Trigger: TGACTCTGGGCTGGCCCTGCAAGAGCTGTCTAGCTG...TCCATGGACCTGCAGTCCATATGCTATTGGACACTCTGTAGGATTCCAGTAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTATTTCCAGCACCACTCCACACCACCTGTGCCTTTCCTTGATACCTCTGGACCTTGGGAATGTCTaGAACCAATGGGAACTGACT | + |
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Preference number: 2 (lower is better) Translates to: EAISSTTPHHLCLSLIPLDLGNV*NQWELT Trigger: AGTCAGTTCCCATTGGTTGCAGACATTCCCAAGGTC...CAGAGGTATCAAGGAAAGGCACAGGTGGTGTGGAGTGGTGCTGGAAATAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAGAGGACCCTCCAGAGGCATGGACACACCCATATCACTCAAAGCTCTGACAAAAGGATGGAAGTaGATTAAAGGATGGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: AERGPSRGMDTPISLKALTKGWK*IKGWAL Trigger: CAGTGCCCATCCTTTAATGCACTTCCATCCTTTTGT...CAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | AGCCCAGAGTCATCCAGCTCAGCTCAGAAAACTAAGATTGGTCTCTaGATAAGCCCTATCAAGAGCTCTCTTCTCCACATCCCAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPESSSSAQKTKIGL*ISPIKSSLLHIPAF Trigger: GAAGGCTGGGATGTGGAGAAGAGAGCTCTTGATAGGGCTTATCAAGAGACCAATCTTAGTTTTCTGAGCTGAGCTGGATGACTCTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | TTAAAAACTTCAAAGGCTAATGCCATGGTGAACAAGCCACTCTTGTaGAAGCAAGCCCTCAGAGAACCGGAGGAGCGTCGGGAGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: LKTSKANAMVNKPLL*KQALREPEERREWI Trigger: TATCCACTCCCGACGCTCCTCCGGTTCTCTGAGGGCTTGCTTCAACAAGAGTGGCTTGTTCACCATGGCATTAGCCTTTGAAGTTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CAA 90 bp | TTTTTAAAAACTTCAAAGGCTAATGCCATGGTGAACAAGCCACTCTaGTTGAAGCAAGCCCTCAGAGAACCGGAGGAGCGTCGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FLKTSKANAMVNKPL*LKQALREPEERREW Trigger: CCACTCCCGACGCTCCTCCGGTTCTCTGAGGGCTTGCTTCAACAAGAGTGGCTTGTTCACCATGGCATTAGCCTTTGAAGTTTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACCCATATCACTCAAAGCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTGACCATCAGTGTGCACTaGTCTCACCACCTCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: THPYHSKLWLQGSLQNQLTISVH*SHHLLI Trigger: GATGAGGAGGTGGTGAGATCAGTGCACACTGATGGT...CAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCTTTGAGTGATATGGGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR GCA 90 bp | GATTACTGGAATCCTACAGAGTGTCCAATAGCATATGGACTGCAGGTCCATGGAAGGGCTCTGTCGGTGTaGCAGAACCATTGCTTACAA | + |
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Preference number: 2 (lower is better) Translates to: DYWNPTECPIAYGLQVHGRALSV*QNHCLQ Trigger: TTGTAAGCAATGGTTCTGGCACACCGACAGAGCCCT...TCCATGGACCTGCAGTCCATATGCTATTGGACACTCTGTAGGATTCCAGTAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCTCACACCCAGAGCATCCTTaGATAAGGTGTGGGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGRSLEEESRTCSSYSVSHPEHP*IRCGMK Trigger: CTTCATCCCACACCTTATGCAAGGATGCTCTGGGTG...TGAGACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTACAGCATGTTGAAGAGTGATGGAGGATaGTTAAGACAAAAGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: LPLALAALFGEWASYSMLKSDGG*LRQKDG Trigger: TCCATCCTTTTGTCTTAACCATCCTCCATCACTCTT...CAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 72 bp | CATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATaGCCCTGTACTCTCGCCCCTCAGCAGGGACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: HEPWLNLARLRE*PCTLAPQQGPG Trigger: CCCTGGTCCCTGCTGAGGGGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 72 bp | TGCCAAGAAGGGCCCAACACTGCTGGATCTTGCAGCTaGATCCCACTGCCCAGTCAAGCCACCCTGACCAGT | + |
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Preference number: 3 (lower is better) Translates to: CQEGPNTAGSCS*IPLPSQATLTS Trigger: ACTGGTCAGGGTGGCTTGACTGGGCAGTGGGATCCAGCTGCAAGATCCAGCAGTGTTGGGCCCTTCTTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 72 bp | CTGGAGGATGGGCACTGGAGGATGGGCATTGGAGGATaGGCATTGGATGGTGCAGCCCTAGAAGGAGGACCA | + |
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Preference number: 3 (lower is better) Translates to: LEDGHWRMGIGG*ALDGAALEGGP Trigger: TGGTCCTCCTTCTAGGGCTGCACCATCCAATGCCCATCCTCCAATGCCCATCCTCCAGTGCCCATCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 72 bp | CTGGAGGATGGGCATTGGAGGATGGGCATTGGATGGTaGAGCCCTAGAAGGAGGACCAAATGGACACCGGGT | + |
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Preference number: 3 (lower is better) Translates to: LEDGHWRMGIGW*SPRRRTKWTPG Trigger: ACCCGGTGTCCATTTGGTCCTCCTTCTAGGGCTGCACCATCCAATGCCCATCCTCCAATGCCCATCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 72 bp | TCCCAGAATGCTGGGAGGCAGCAGAGCCCGCAGAGGTaGGAACACCCTATCCCAACTCCCCTACATGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SQNAGRQQSPQR*EHPIPTPLHVL Trigger: TAGAACATGTAGGGGAGTTGGGATAGGGTGTTCCCACCTCTGCGGGCTCTGCTGCCTCCCAGCATTCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR CCA 72 bp | GCACTGGAGGATGGGCATTGGAGGATGGGCATTGGATaGTGCAGCCCTAGAAGGAGGACCAAATGGACACCG | + |
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Preference number: 3 (lower is better) Translates to: ALEDGHWRMGIG*CSPRRRTKWTP Trigger: CGGTGTCCATTTGGTCCTCCTTCTAGGGCTGCACCATCCAATGCCCATCCTCCAATGCCCATCCTCCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR TCA 72 bp | CTTGCAGCTGGATCCCACTGCCCAGTCAAGCCACCCTaGCCAGTGCAGTCGACCATGGAGGAAGTATACCAA | + |
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Preference number: 3 (lower is better) Translates to: LAAGSHCPVKPP*PVQSTMEEVYQ Trigger: TTGGTATACTTCCTCCATGGTCGACTGCACTGGTCAGGGTGGCTTGACTGGGCAGTGGGATCCAGCTGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| 3UTR GCA 72 bp | ACAAAGATTCTGAGAGGCCCAAGTGTGATCCCAGAATaGTGGGAGGCAGCAGAGCCCGCAGAGGTGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: TKILRGPSVIPE*WEAAEPAEVGT Trigger: TGTTCCCACCTCTGCGGGCTCTGCTGCCTCCCAGCATTCTGGGATCACACTTGGGCCTCTCAGAATCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR TCA 72 bp | GTTCTGGGACCTCCAATCTCAGCCCCATGTCCTTCCTaGCCTGCAGGGGGCATCTTCCCAAATTCAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLGPPISAPCPS*PAGGIFPNSAR Trigger: TCTAGCTGAATTTGGGAAGATGCCCCCTGCAGGTCAGGAAGGACATGGGGCTGAGATTGGAGGTCCCAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR GCA 72 bp | GCATATGGACTGCAGGTCCATGGAATGAGTGAGCTCTaGCAAGAAGGGCCCAACACTGCTGGATCTTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AYGLQVHGMSEL*QEGPNTAGSCS Trigger: GCTGCAAGATCCAGCAGTGTTGGGCCCTTCTTGGCAGAGCTCACTCATTCCATGGACCTGCAGTCCATATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | TCTCCACATCCCAGCCTTCTCAAAGGTCCTAGTGCCTaGCTCCCTGAAGAAAAGTCCTGCGAGCTCGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPHPSLLKGPSA*LPEEKSCELEN Trigger: GTTCTCGAGCTCGCAGGACTTTTCTTCAGGGAGCCAGGCACTAGGACCTTTGAGAAGGCTGGGATGTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | TCTCGCCCCTCAGCAGGGACCAGGGAGGGAAAGCACTaGGGCAAGGAGTATTGTTTCCATGACGATAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: SRPSAGTREGKH*GKEYCFHDDKM Trigger: CATCTTATCGTCATGGAAACAATACTCCTTGCCCCAGTGCTTTCCCTCCCTGGTCCCTGCTGAGGGGCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTTCCTGGTCTCTGCCTGGAGCCTATCCCATCTGGGACACTTCTACCTTCAACACTGCTGGATCTaGCAGCTGGATCCCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLFLVSAWSLSHLGHFYLQHCWI*QLDPTA Trigger: GGCAGTGGGATCCAGCTGCAAGATCCAGCAGTGTTG...AAGGTAGAAGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR GCA 72 bp | CAAAGCTCTGGCTTCAAGGCTCTCTTCAAAATCAGCTaGCCTGCAGCTTGCCTCTTGCCCTTGCAGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QSSGFKALFKIS*PAACLLPLQPC Trigger: ACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | ATGTTGGCACAGCCACTTGTGACTTGGCATGAACCCTaGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MLAQPLVTWHEP*LNLARLREWPC Trigger: ACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATGCCAAGTCACAAGTGGCTGTGCCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | GCCCTGCAGCTTGCCTCTTGCCCTTGCAGCCTTGTTTaGAGAATGGGCTTCCTACAGCATGTTGTTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALQLASCPCSLV*RMGFLQHVVWR Trigger: TCTCCAAACAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR TCA 72 bp | TCCAATAGCATATGGACTGCAGGTCCATGGAATGAGTaGGCTCTGCCAAGAAGGGCCCAACACTGCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SNSIWTAGPWNE*ALPRRAQHCWI Trigger: GATCCAGCAGTGTTGGGCCCTTCTTGGCAGAGCTCACTCATTCCATGGACCTGCAGTCCATATGCTATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR GCA 72 bp | AAAGGTCCTAGTGCCTGGCTCCCTGAAGAAAAGTCCTaGGAGCTCGAGAACAAAGATTCTGAGAGGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KGPSAWLPEEKS*ELENKDSERPK Trigger: CTTGGGCCTCTCAGAATCTTTGTTCTCGAGCTCGCAGGACTTTTCTTCAGGGAGCCAGGCACTAGGACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | CATCTTCTCCTCAAGGGAGTCAGAGATCTCTTTTCCTaGTCTCTGCCTGGAGCCTATCCCATCTGGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: HLLLKGVRDLFS*SLPGAYPIWDT Trigger: AGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAGATCTCTGACTCCCTTGAGGAGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | CCAGAGGCATGGACACACCCATATCACTCAAAGCTCTaGCTTCAAGGCTCTCTTCAAAATCAGCTGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PEAWTHPYHSKL*LQGSLQNQLPC Trigger: GCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAGCCAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTACAGCATGTTGAAACCCCAGGAATCCTaGGTAGAGACAGCACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPLALAALFGEWASYSMLKPQES*VETAPR Trigger: TCTGGGTGCTGTCTCTACCAAGGATTCCTGGGGTTT...CAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR TCA 72 bp | GTCCCTCTCTCCAGTACTGCTTGGATTTGTCCTGAATaGGACAAACAGCCCTGCAATCATTTCCACCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VPLSSTAWICPE*DKQPCNHFHQG Trigger: ACCCTGGTGGAAATGATTGCAGGGCTGTTTGTCTCATTCAGGACAAATCCAAGCAGTACTGGAGAGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR TCA 72 bp | CACTGTCCCTCTCTCCAGTACTGCTTGGATTTGTCCTaGATGAGACAAACAGCCCTGCAATCATTTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: HCPSLQYCLDLS*MRQTALQSFPP Trigger: TGGTGGAAATGATTGCAGGGCTGTTTGTCTCATTCAGGACAAATCCAAGCAGTACTGGAGAGAGGGACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR TCA 72 bp | TCTAGGACCTTGGGAATGTCTGCAACCAATGGGAACTaGCTTACTACTGAATACCACAGTACCTGTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRTLGMSATNGN*LTTEYHSTCSP Trigger: AGGGGAACAGGTACTGTGGTATTCAGTAGTAAGTCAGTTCCCATTGGTTGCAGACATTCCCAAGGTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | CTCTTTTCCTGGTCTCTGCCTGGAGCCTATCCCATCTaGGACACTTCTACCTTACTTATGATTACTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: LFSWSLPGAYPI*DTSTLLMITGI Trigger: GATTCCAGTAATCATAAGTAAGGTAGAAGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTTCCTGGTCTCTGCCTGGAGCCTATCCCATCTGGGACACTTCTACCTTAGTCTAACATTCTGTTaGAGTCCAAAAGTTGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLFLVSAWSLSHLGHFYLSLTFC*SPKVVG Trigger: TCCTACAACTTTTGGACTCAAACAGAATGTTAGACT...AAGGTAGAAGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR GCA 72 bp | AGATGGGGAAGATTCTTTATGACAAAACCATCAGTGTaGACTGATCTCACCACCTCCTCATCTTCTCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RWGRFFMTKPSV*TDLTTSSSSPQ Trigger: TTGAGGAGAAGATGAGGAGGTGGTGAGATCAGTGCACACTGATGGTTTTGTCATAAAGAATCTTCCCCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | TCCCATCTGGGACACTTCTACCTTACTTATGATTACTaGAATCCTACAGAGTGTCCAATAGCATATGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: SHLGHFYLTYDY*NPTECPIAYGL Trigger: CAGTCCATATGCTATTGGACACTCTGTAGGATTCCAGTAATCATAAGTAAGGTAGAAGTGTCCCAGATGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTCAAAGGCACTGTCTTAGCAGATGAGAGTCCTGAGGAGATAGAAGATAAGGGTGTGCCAGAACCATaGCTTACAATAAAACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TFKGTVLADESPEEIEDKGVPEP*LTIKQV Trigger: AACTTGTTTTATTGTAAGCAATGGTTCTGGCACACC...CTTATCTTCTATCTCCTCAGGACTCTCATCTGCTAAGACAGTGCCTTTGAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CCA 72 bp | TTCCATGACGATAAGATGGGAAAGAGTGATGGAGGATaGTTAAGACAAAAGGATGGAAGTGCATTAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FHDDKMGKSDGG*LRQKDGSALKD Trigger: ATCCTTTAATGCACTTCCATCCTTTTGTCTTAACCATCCTCCATCACTCTTTCCCATCTTATCGTCATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCCAAGTGTGATCCCAGAATGCTGGGAGGCAGCAGAGCCCGCAGAGGTTCATCTGGAGGCTCCTaGACCTTTCCTGGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERPKCDPRMLGGSRARRGSSGGS*TFPGFS Trigger: GGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGATGA...ACCTCTGCGGGCTCTGCTGCCTCCCAGCATTCTGGGATCACACTTGGGCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | GCAGGGGGCATCTTCCCAAATTCAGCTAGACAGCTCTaGCAGGGCCAGCCCAGAGTCATCCAGCTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGIFPNSARQL*QGQPRVIQLSS Trigger: TGAGCTGAGCTGGATGACTCTGGGCTGGCCCTGCAAGAGCTGTCTAGCTGAATTTGGGAAGATGCCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | GATGGGCACTGGAGGATGGGCATTGGAGGATGGGCATaGGATGGTGCAGCCCTAGAAGGAGGACCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGHWRMGIGGWA*DGAALEGGPNG Trigger: TCCATTTGGTCCTCCTTCTAGGGCTGCACCATCCAATGCCCATCCTCCAATGCCCATCCTCCAGTGCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGAGGACCCTCCAGAGGCATGGACACACCCATATCACTCAAAGCTCTGGGCTGGTGTTTGTGGTaGTGGCCAGTCCATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AERGPSRGMDTPISLKALGWCLW*WPVHWE Trigger: TTCCCAATGGACTGGCCATCACCACAAACACCAGCC...CAGAGCTTTGAGTGATATGGGTGTGTCCATGCCTCTGGAGGGTCCTCTCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGAGGGAGGTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTGACGGCCTCAGACCCTaGAGGCTTCCTGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLREVLGRSLEEESRTCSDGLRP*RLPGGE Trigger: TTCCCCTCCAGGAAGCCTCCAGGGTCTGAGGCCGTC...AGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCACCTCCCTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GAATCCTTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACGGCCTCAGACCCTaGAGGCTTCCTGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLVETAPRASLHKVWDEDGLRP*RLPGGE Trigger: TTCCCCTCCAGGAAGCCTCCAGGGTCTGAGGCCGTC...TTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAAGGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTCCCTTGGGAGTGGACTaGCCCAGCTCAGGGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: ETAPRASLHKVWDEDQVTPLGVD*PSSGNI Trigger: TATGTTCCCTGAGCTGGGGCAGTCCACTCCCAAGGG...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| 3UTR CAA 72 bp | GCTCTCTTCAAAATCAGCTGCCCTGCAGCTTGCCTCTaGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFKISCPAACL*PLQPCLENGLP Trigger: AGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR TCA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTCACAGGAACACACTTTaGGGACCACCTCCTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: ETAPRASLHKVWDEDQVTHRNTL*GPPPPT Trigger: CGTTGGAGGAGGTGGTCCTCAAAGTGTGTTCCTGTG...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR TCA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTGGCTGGTGTTTGTGGTaGTGGCCAGTCCATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETAPRASLHKVWDEDQVTGWCLW*WPVHWE Trigger: TTCCCAATGGACTGGCCATCACCACAAACACCAGCC...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTACAGCATGTTGTCAGTTCCTGGTCCGTaGTGGGCTCTTCCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPLALAALFGEWASYSMLSVPGP*WALPPM Trigger: CATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGA...CAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAACCCTTGGGAGTGGACTaGCCCAGCTCAGGGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: LVETAPRASLHKVWDEDQPLGVD*PSSGNI Trigger: TATGTTCCCTGAGCTGGGGCAGTCCACTCCCAAGGG...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCTCTTTTCCTGGTCTCTGCCTGGAGCCTATCCCATCTGGGACACTTCCCTTGCCAAAGAGGCTaGCATGGAAGCAAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSLFLVSAWSLSHLGHFPCQRG*HGSKAS Trigger: ACTGGCTTTGCTTCCATGCCAGCCTCTTTGGCAAGG...GAAGTGTCCCAGATGGGATAGGCTCCAGGCAGAGACCAGGAAAAGAGATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCGACGGCCTCAGACCCTaGAGGCTTCCTGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGRSLEEESRTCSSYSVDGLRP*RLPGGE Trigger: TTCCCCTCCAGGAAGCCTCCAGGGTCTGAGGCCGTC...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | GTCTCAGCACAGCCGCAGTATAAACCCCAGGAATCCTaGGTAGAGACAGCACCCAGAGCATCCTTGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSAQPQYKPQES*VETAPRASLHK Trigger: CTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAAGGATTCCTGGGGTTTATACTGCGGCTGTGCTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| 3UTR CAA 72 bp | CTTCAAGGCTCTCTTCAAAATCAGCTGCCCTGCAGCTaGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGSLQNQLPCS*PLALAALFGEW Trigger: CCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAAGCTGCAGGGCAGCTGATTTTGAAGAGAGCCTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGGCTGGTGTTTGTGGTaGTGGCCAGTCCATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVETAPRASLHKVWDEDQGWCLW*WPVHWE Trigger: TTCCCAATGGACTGGCCATCACCACAAACACCAGCC...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAACAGGTACTTCAGGTCACTCACTGAGGGAGGTGCTAGGGAGGAGTCTGGGCTCTTCCTCCAATaGATCTTTCTCACAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVNRYFRSLTEGGAREESGLFLQ*IFLTDG Trigger: GCCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCC...AGACTCCTCCCTAGCACCTCCCTCAGTGAGTGACCTGAAGTACCTGTTTACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAATCAGTTCCTGGTCCGTaGTGGGCTCTTCCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LVETAPRASLHKVWDEDQSVPGP*WALPPM Trigger: CATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGA...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAACTTCTCTTAGGCCCTTaGTTCCAGCCTCGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLVETAPRASLHKVWDELLLGP*FQPRLS Trigger: TGAGAGCCGAGGCTGGAAGCAAGGGCCTAAGAGAAG...TTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAAGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAACAGGTACTTCAGGTCACTCACTGAGGGAGGTGCTAGGGAGGAGTCTTACTCAGACTCTTCTTaGTGGAAGGCTGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVNRYFRSLTEGGAREESYSDSS*WKAAGE Trigger: CTCACCTGCAGCCTTCCAGCAAGAAGAGTCTGAGTA...AGACTCCTCCCTAGCACCTCCCTCAGTGAGTGACCTGAAGTACCTGTTTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAATCATCTGGAGGCTCCTaGACCTTTCCTGGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVETAPRASLHKVWDEDQSSGGS*TFPGFS Trigger: GGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGATGA...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR TCA 90 bp | AGAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAACACAGGAACACACTTTaGGGACCACCTCCTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: RTCSSYSVSAQPQYKPQEHRNTL*GPPPPT Trigger: CGTTGGAGGAGGTGGTCCTCAAAGTGTGTTCCTGTG...TTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAATACTCAGACTCTTCTTaGTGGAAGGCTGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVETAPRASLHKVWDEDQYSDSS*WKAAGE Trigger: CTCACCTGCAGCCTTCCAGCAAGAAGAGTCTGAGTA...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS-3UTR GCA 90 bp | AGAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAATCAGTTCCTGGTCCGTaGTGGGCTCTTCCTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RTCSSYSVSAQPQYKPQESVPGP*WALPPM Trigger: CATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGA...TTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | TGTTGTTTGGAGAACGGGCTTCCTACAGCATGTTGTTaGGAGAATGGGCTTCCTACAGCATGTTGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLENGLPTACC*ENGLPTACWHS Trigger: GCTGTGCCAACATGCTGTAGGAAGCCCATTCTCCAAACAACATGCTGTAGGAAGCCCGTTCTCCAAACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCGGGCTCTTCCTCCAATaGATCTTTCTCACAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGRSLEEESRTCSSYSVGLFLQ*IFLTDG Trigger: GCCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCC...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCCCTTGCCAAAGAGGCTaGCATGGAAGCAAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRSLEEESRTCSSYSVPCQRG*HGSKAS Trigger: ACTGGCTTTGCTTCCATGCCAGCCTCTTTGGCAAGG...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | CCTTGTTTGGAGAATGGGCTTCCTACAGCATGTTGTTaGGAGAACGGGCTTCCTACAGCATGTTGTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCLENGLPTACC*ENGLPTACCLE Trigger: CTCCAAACAACATGCTGTAGGAAGCCCGTTCTCCAAACAACATGCTGTAGGAAGCCCATTCTCCAAACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR GCA 90 bp | GAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAATTACTCAGACTCTTCTTaGTGGAAGGCTGCAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EHVLHTQSQHSRSINPRNYSDSS*WKAAGE Trigger: CTCACCTGCAGCCTTCCAGCAAGAAGAGTCTGAGTA...ATTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCTATTTCCAGCACCACTCCACACCACCTGTGCCTTTCCTTGATACCTCTGAGCTTGTGGTATTGTTaGTTGTATTTGCTCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAISSTTPHHLCLSLIPLSLWYC*LYLLRS Trigger: ACTACGGAGCAAATACAACCAACAATACCACAAGCT...CAGAGGTATCAAGGAAAGGCACAGGTGGTGTGGAGTGGTGCTGGAAATAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCTTCCCGTGCATTTGTTaGTTGCTAGAGGGAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRSLEEESRTCSSYSVFPCIC*LLEGNV Trigger: CACATTTCCCTCTAGCAACCAACAAATGCACGGGAA...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098661.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCTTCCCGTGCATTTGTTaGTTGCTCTGCCAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRSLEEESRTCSSYSVFPCIC*LLCQSD Trigger: ATCAGATTGGCAGAGCAACCAACAAATGCACGGGAA...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| 3UTR CAA 72 bp | TCATCCAGCTCAGCTCAGAAAACTAAGATTGGTCTCTaGATAAGCCCTATCAAGAGCTCTCTTCTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSAQKTKIGL*ISPIKSSLLHI Trigger: GATGTGGAGAAGAGAGCTCTTGATAGGGCTTATCAAGAGACCAATCTTAGTTTTCTGAGCTGAGCTGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCTCAAGCTTGTGGTATTGTTaGTTGTATTTGCTCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRSLEEESRTCSSYSVSSLWYC*LYLLRS Trigger: ACTACGGAGCAAATACAACCAACAATACCACAAGCT...TGAGACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS CCA 90 bp | CAGGGCACATGGCTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTaGTTGCTGCCCGCCTCGACAGGCTCGCTACGGCTCAGGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGTWLFRGAIFPCIC*LLPASTGSLRLRAV Trigger: GACCGCCCTGAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
||
| CDS GCA 90 bp | TTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTGCCATCTTCCCGTaGATTTGTTGGTTGCTGCCCGCCTCGACAGGCTCGCTACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVQGTWLFRGAIFP*ICWLLPASTGSLRL Trigger: GAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
||
| CDS GCA 90 bp | ATCCCACAGCCTCAGTTCCTGGTCCGTGCTGGGCTCTTCCTCCAATaGATCTTTCTCACAGACGGCCTCAGACCCTGGAGGCTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPQPQFLVRAGLFLQ*IFLTDGLRPWRLPG Trigger: TCCAGGAAGCCTCCAGGGTCTGAGGCCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGAGGCTGTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS GCA 90 bp | GACCTTTCCTGGTTTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTaGCATCTTCCCGTGCATTTGTTGGTTGCTGCCCGCCTCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLSWFLRAGHMALQR*HLPVHLLVAARLDR Trigger: CCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
||
| CDS CCA 90 bp | GGGCTCTTCCTCCAATGCATCTTTCTCACAGACGGCCTCAGACCCTaGAGGCTTCCTGGAGGGGAAGCAGCTATCTGTGGAGTCTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLFLQCIFLTDGLRP*RLPGGEAAICGVCR Trigger: CCGACAGACTCCACAGATAGCTGCTTCCCCTCCAGGAAGCCTCCAGGGTCTGAGGCCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS TCA 90 bp | GGCTTCCTGGAGGGGAAGCAGCTATCTGTGGAGTCTGTCGGGATCTaGGAGATACAAGAGATGCTGTCTGGGAGTGACAGGGATGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLEGKQLSVESVGI*EIQEMLSGSDRDAG Trigger: CCCCGCATCCCTGTCACTCCCAGACAGCATCTCTTGTATCTCTCAGATCCCGACAGACTCCACAGATAGCTGCTTCCCCTCCAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
||
| CDS CCA 90 bp | CCAATGCATCTTTCTCACAGACGGCCTCAGACCCTGGAGGCTTCCTaGAGGGGAAGCAGCTATCTGTGGAGTCTGTCGGGATCTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PMHLSHRRPQTLEAS*RGSSYLWSLSGSER Trigger: TCTCTCAGATCCCGACAGACTCCACAGATAGCTGCTTCCCCTCCAGGAAGCCTCCAGGGTCTGAGGCCGTCTGTGAGAAAGATGCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS CCA 90 bp | TCTGGAGGCTCCTGGACCTTTCCTGGTTTCTCCGTGCAGGGCACATaGCTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGSWTFPGFSVQGT*LFRGAIFPCICWLL Trigger: CAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
||
| CDS CCA 90 bp | TCTGGAGGCTCCTGGACCTTTCCTGGTTTCTCCGTGCAGGGCACATaGCTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGSWTFPGFSVQGT*LFRGAIFPCICWLL Trigger: GAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | CATGAACCCTGGCTCAACCTAGCAAGGCTCAGAGAATGGCCCTGTACTCTCGCCGCACAGGAACACACTTaGAGGACCACCTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEPWLNLARLREWPCTLAAQEHT*RTTSSN Trigger: GTTGGAGGAGGTGGTCCTCAAAGTGTGTTCCTGTGC...GGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTAGGTTGAGCCAGGGTTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS CCA 90 bp | TCTGGAGGCTCCTGGACCTTTCCTGGTTTCTCCGTGCAGGGCACATaGCTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SGGSWTFPGFSVQGT*LFRGAIFPCICWLL Trigger: TAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098661.10 |
||
| CDS CCA 90 bp | TTTGAGCCTTCTGACCAGTGCAGACTGCCATCATCTGGAGGCTCCTaGACCTTTCCTGGTTTCTCCGTGCAGGGCACATGGCTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FEPSDQCRLPSSGGS*TFPGFSVQGTWLFR Trigger: TCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGATGATGGCAGTCTGCACTGGTCAGAAGGCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTGTGATGGCCAGTCCATaGGGAAGGAGTCGTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ETAPRASLHKVWDEDQVTVMASP*GRSRAI Trigger: GATGGCACGACTCCTTCCCAATGGACTGGCCATCAC...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS GCA 90 bp | GACCTTTCCTGGTTTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTaGCATCTTCCCGTGCATTTGTTGGTTGCTAGAGGGAAATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLSWFLRAGHMALQR*HLPVHLLVARGKCV Trigger: GACACATTTCCCTCTAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCAGGAAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098661.10 |
||
| CDS-3UTR CAA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTGCACAGGAACACACTTaGAGGACCACCTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ETAPRASLHKVWDEDQVTAQEHT*RTTSSN Trigger: GTTGGAGGAGGTGGTCCTCAAAGTGTGTTCCTGTGC...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
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| CDS-3UTR CAA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGATGGCCAGTCCATaGGGAAGGAGTCGTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVETAPRASLHKVWDEDQVMASP*GRSRAI Trigger: GATGGCACGACTCCTTCCCAATGGACTGGCCATCAC...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS GCA 90 bp | TTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTGCCATCTTCCCGTaGATTTGTTGGTTGCTCTGCCAATCTGATAGGCAGAAAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: FSVQGTWLFRGAIFP*ICWLLCQSDRQKNI Trigger: GATGTTTTTCTGCCTATCAGATTGGCAGAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| CDS-3UTR CAA 90 bp | GAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAATGTGATGGCCAGTCCATaGGGAAGGAGTCGTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: EHVLHTQSQHSRSINPRNVMASP*GRSRAI Trigger: GATGGCACGACTCCTTCCCAATGGACTGGCCATCAC...ATTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTTGCCCTTGCAGCCTTGTTTGGAGAATGGGCTTCCTACAGCATGTTGCATCTTCCCGTGCATTaGTTGGTTGCTCTGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LPLALAALFGEWASYSMLHLPVH*LVALPI Trigger: GATTGGCAGAGCAACCAACAAATGCACGGGAAGATG...CAACATGCTGTAGGAAGCCCATTCTCCAAACAAGGCTGCAAGGGCAAGAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| CDS-3UTR CAA 90 bp | TCACTGAGGGAGGTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTCCGTGCATTTGTTGGTaGCTAGAGGGAAATGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLREVLGRSLEEESRTCSPCICW*LEGNVS Trigger: GGACACATTTCCCTCTAGCAACCAACAAATGCACGG...AGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCACCTCCCTCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098661.10 |
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| CDS TCA 90 bp | GGGAAAGCAGAGACACAAAGACATACTTCTGGCTGGTGTTTGTGGTaGTGGCCAGTCCATTGGGAAGGAGTCGTGCCATCTTGTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKAETQRHTSGWCLW*WPVHWEGVVPSCVF Trigger: AAAAACACAAGATGGCACGACTCCTTCCCAATGGACTGGCCATCACCACAAACACCAGCCAGAAGTATGTCTTTGTGTCTCTGCTTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS-3UTR CAA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAACTTCCCGTGCATTTGTaGGTTGCTAGAGGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVETAPRASLHKVWDEDQLPVHL*VARGKC Trigger: ACATTTCCCTCTAGCAACCAACAAATGCACGGGAAG...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098661.10 |
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| CDS-3UTR CAA 90 bp | CTGAGGGAGGTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATTATGTCTTCACCCTTaGAGCCTTCTGACCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LREVLGRSLEEESRTCSSLCLHP*SLLTSA Trigger: TGCACTGGTCAGAAGGCTCAAAGGGTGAAGACATAA...TGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCACCTCCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGAGGGAGGTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTACAGGAATGACCACCTaGATATCCTTGCCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLREVLGRSLEEESRTCSTGMTT*ISLPKR Trigger: CCTCTTTGGCAAGGATATCAAGGTGGTCATTCCTGT...AGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCACCTCCCTCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS CCA 90 bp | ACTTTGAGGACCACCTCCTCCAACGGGATATCTTTAAACAGCTTGTaGTATTGTTGGTTGTATTTGCTCCGTAGTGTCCCTTCCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLRTTSSNGISLNSL*YCWLYLLRSVPSRL Trigger: TAGCCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGTGGTCCTCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGTGACTAAACAGCTTGTGGTATaGTTGGTTGTATTTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ETAPRASLHKVWDEDQVTKQLVV*LVVFAP Trigger: CGGAGCAAATACAACCAACAATACCACAAGCTGTTT...AGTCACTTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GATTACTGGAATCCTACAGAGTGTCCAATAGCATATGGACTGCAGGTCCATGGATTATGTCTTCACCCTTaGAGCCTTCTGACCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DYWNPTECPIAYGLQVHGLCLHP*SLLTSA Trigger: TGCACTGGTCAGAAGGCTCAAAGGGTGAAGACATAA...TCCATGGACCTGCAGTCCATATGCTATTGGACACTCTGTAGGATTCCAGTAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GAATCCTTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAATTGTGGTATTGTTGGTaGTATTTGCTCCGTAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESLVETAPRASLHKVWDELWYCW*YLLRSV Trigger: GACACTACGGAGCAAATACAACCAACAATACCACAA...TTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAAGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGGAGGAGTCTGGAGGAAGAATCTAGAACATGTTCTTCATACTCAGTCACAGGAATGACCACCTaGATATCCTTGCCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGRSLEEESRTCSSYSVTGMTT*ISLPKR Trigger: CCTCTTTGGCAAGGATATCAAGGTGGTCATTCCTGT...GACTGAGTATGAAGAACATGTTCTAGATTCTTCCTCCAGACTCCTCCCTAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS CCA 90 bp | ACCACCTCCTCCAACGGGATATCTTTAAACAGCTTGTGGTATTGTTaGTTGTATTTGCTCCGTAGTGTCCCTTCCCGGCTATACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSNGISLNSLWYC*LYLLRSVPSRLYFF Trigger: AAAGAAGTATAGCCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTAGAGACAGCACCCAGAGCATCCTTGCATAAGGTGTGGGATGAAGACCAAGCCATCTTGTGTTTTTaGATCAATTGCACAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: LVETAPRASLHKVWDEDQAILCF*INCTDT Trigger: GGTATCTGTGCAATTGATCAAAAAACACAAGATGGC...TTGGTCTTCATCCCACACCTTATGCAAGGATGCTCTGGGTGCTGTCTCTACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | GAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACCCCAGGAATAAACAGCTTGTGGTATaGTTGGTTGTATTTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EHVLHTQSQHSRSINPRNKQLVV*LVVFAP Trigger: CGGAGCAAATACAACCAACAATACCACAAGCTGTTT...ATTCCTGGGGTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS-3UTR CAA 90 bp | AAGAATCTAGAACATGTTCTTCATACTCAGTCTCAGCACAGCCGCAGTATAAACGCCATCTTGTGTTTTTaGATCAATTGCACAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: KNLEHVLHTQSQHSRSINAILCF*INCTDT Trigger: GGTATCTGTGCAATTGATCAAAAAACACAAGATGGC...GTTTATACTGCGGCTGTGCTGAGACTGAGTATGAAGAACATGTTCTAGATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 |
||
| CDS GCA 72 bp | TCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTTGCTaGCCGCCTCGACAGGCTCGCTACGGCTCAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SEVPSSRAFVGC*PPRQARYGSGR Trigger: CCGCCCTGAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS GCA 72 bp | TCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTTaGTGCCCGCCTCGACAGGCTCGCTACGGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSEVPSSRAFVG*CPPRQARYGSG Trigger: CCCTGAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS GCA 72 bp | CAGGGCACATGGCTCTTCAGAGGTGCCATCTTCCCGTaGATTTGTTGGTTGCTGCCCGCCTCGACAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: QGTWLFRGAIFP*ICWLLPASTGS Trigger: CGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS CCA 72 bp | TGGCTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTaGTTGCTGCCCGCCTCGACAGGCTCGCTACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WLFRGAIFPCIC*LLPASTGSLRL Trigger: GAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS CAA 72 bp | CTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTaGCTGCCCGCCTCGACAGGCTCGCTACGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LFRGAIFPCICW*LPASTGSLRLR Trigger: CCTGAGCCGTAGCGAGCCTGTCGAGGCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS GCA 72 bp | CCTCAGTTCCTGGTCCGTGCTGGGCTCTTCCTCCAATaGATCTTTCTCACAGACGGCCTCAGACCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PQFLVRAGLFLQ*IFLTDGLRPWR Trigger: CCTCCAGGGTCTGAGGCCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS CAA 72 bp | CACTTCATCTCGGGGATAAGGACTTCTCTTAGGCCCTaGCTTCCAGCCTCGGCTCTCACCGGGGACTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: HFISGIRTSLRP*LPASALTGDSH Trigger: GTGCGAGTCCCCGGTGAGAGCCGAGGCTGGAAGCAAGGGCCTAAGAGAAGTCCTTATCCCCGAGATGAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129129.2 |
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| CDS GCA 72 bp | CTGTGGAGTCTGTCGGGATCTGAGAGATACAAGAGATaGTGTCTGGGAGTGACAGGGATGCGGGGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LWSLSGSERYKR*CLGVTGMRGLS Trigger: GCTCAGCCCCCGCATCCCTGTCACTCCCAGACAGCATCTCTTGTATCTCTCAGATCCCGACAGACTCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS GCA 72 bp | TGGTTTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTaGCATCTTCCCGTGCATTTGTTGGTTGCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: WFLRAGHMALQR*HLPVHLLVAAR Trigger: GCGGGCAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123914.8 |
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| CDS CCA 72 bp | TCTGACCAGTGCAGACTGCCATCATCTGGAGGCTCCTaGACCTTTCCTGGTTTCTCCGTGCAGGGCACATGG | + |
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Preference number: 6 (lower is better) Translates to: SDQCRLPSSGGS*TFPGFSVQGTW Trigger: CCATGTGCCCTGCACGGAGAAACCAGGAAAGGTCCAGGAGCCTCCAGATGATGGCAGTCTGCACTGGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CCA 72 bp | GCCGAGAATCCCACAGCCTCAGTTCCTGGTCCGTGCTaGGCTCTTCCTCCAATGCATCTTTCTCACAGACGG | + |
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Preference number: 6 (lower is better) Translates to: AENPTASVPGPC*ALPPMHLSHRR Trigger: CCGTCTGTGAGAAAGATGCATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGAGGCTGTGGGATTCTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS GCA 72 bp | GGAGCCGAGAATCCCACAGCCTCAGTTCCTGGTCCGTaGTGGGCTCTTCCTCCAATGCATCTTTCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GAENPTASVPGP*WALPPMHLSHR Trigger: TCTGTGAGAAAGATGCATTGGAGGAAGAGCCCAGCACGGACCAGGAACTGAGGCTGTGGGATTCTCGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS GCA 72 bp | TGGTTTCTCCGTGCAGGGCACATGGCTCTTCAGAGGTaGCATCTTCCCGTGCATTTGTTGGTTGCTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WFLRAGHMALQR*HLPVHLLVALP Trigger: TGGCAGAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTGCACGGAGAAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| CDS GCA 72 bp | TGTCTTCACCCTTTGAGCCTTCTGACCAGTGCAGACTaGCATCATCTGGAGGCTCCTGGACCTTTCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: CLHPLSLLTSAD*HHLEAPGPFLV Trigger: AACCAGGAAAGGTCCAGGAGCCTCCAGATGATGGCAGTCTGCACTGGTCAGAAGGCTCAAAGGGTGAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS GCA 72 bp | CAGGGCACATGGCTCTTCAGAGGTGCCATCTTCCCGTaGATTTGTTGGTTGCTCTGCCAATCTGATAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGTWLFRGAIFP*ICWLLCQSDRQ Trigger: CTGCCTATCAGATTGGCAGAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAGCCATGTGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| CDS CAA 90 bp | TCCGTAGTGTCCCTTCCCGGCTATACTTCTTTATGTCTTCACCCTTaGAGCCTTCTGACCAGTGCAGACTGCCATCATCTGGAGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVVSLPGYTSLCLHP*SLLTSADCHHLEAP Trigger: AGGAGCCTCCAGATGATGGCAGTCTGCACTGGTCAGAAGGCTCAAAGGGTGAAGACATAAAGAAGTATAGCCGGGAAGGGACACTACGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS TCA 72 bp | GAGACACAAAGACATACTTCTGGCTGGTGTTTGTGGTaGTGGCCAGTCCATTGGGAAGGAGTCGTGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: ETQRHTSGWCLW*WPVHWEGVVPS Trigger: AGATGGCACGACTCCTTCCCAATGGACTGGCCATCACCACAAACACCAGCCAGAAGTATGTCTTTGTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS CAA 72 bp | GACAGGACTAGAAAGCAGATCATCACAAAGATGACCTaGAGGAGCCGAGAATCCCACAGCCTCAGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DRTRKQIITKMT*RSRESHSLSSW Trigger: CCAGGAACTGAGGCTGTGGGATTCTCGGCTCCTCAAGGTCATCTTTGTGATGATCTGCTTTCTAGTCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000128944.8 ENSMUST00000129129.2 |
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| CDS CAA 72 bp | TCCCTTCCCGGCTATACTTCTTTATGTCTTCACCCTTaGAGCCTTCTGACCAGTGCAGACTGCCATCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPGYTSLCLHP*SLLTSADCHHL Trigger: CAGATGATGGCAGTCTGCACTGGTCAGAAGGCTCAAAGGGTGAAGACATAAAGAAGTATAGCCGGGAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 90 bp | CACACTTTGAGGACCACCTCCTCCAACGGGATATCTTTAAACAGCTaGTGGTATTGTTGGTTGTATTTGCTCCGTAGTGTCCCTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: HTLRTTSSNGISLNS*WYCWLYLLRSVPSR Trigger: CCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGTGGTCCTCAAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 90 bp | GTGATGGCCAGTCCATTGGGAAGGAGTCGTGCCATCTTGTGTTTTTaGATCAATTGCACAGATACCACAGGAATGACCACCTTGATATCC | + |
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Preference number: 6 (lower is better) Translates to: VMASPLGRSRAILCF*INCTDTTGMTTLIS Trigger: GGATATCAAGGTGGTCATTCCTGTGGTATCTGTGCAATTGATCAAAAAACACAAGATGGCACGACTCCTTCCCAATGGACTGGCCATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 72 bp | CTCTTCAGAGGTGCCATCTTCCCGTGCATTTGTTGGTaGCTCTGCCAATCTGATAGGCAGAAAAACATCATC | + |
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Preference number: 6 (lower is better) Translates to: LFRGAIFPCICW*LCQSDRQKNII Trigger: GATGATGTTTTTCTGCCTATCAGATTGGCAGAGCAACCAACAAATGCACGGGAAGATGGCACCTCTGAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128944.8 |
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| CDS CCA 72 bp | ACCACCTCCTCCAACGGGATATCTTTAAACAGCTTGTaGTATTGTTGGTTGTATTTGCTCCGTAGTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TTSSNGISLNSL*YCWLYLLRSVP Trigger: AGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 72 bp | AGGACCACCTCCTCCAACGGGATATCTTTAAACAGCTaGTGGTATTGTTGGTTGTATTTGCTCCGTAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RTTSSNGISLNS*WYCWLYLLRSV Trigger: GACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGTGGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 90 bp | ACCTCCTCCAACGGGATATCTTTAAACAGCTTGTGGTATTGTTGGTaGTATTTGCTCCGTAGTGTCCCTTCCCGGCTATACTTCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: TSSNGISLNSLWYCW*YLLRSVPSRLYFFM Trigger: CATAAAGAAGTATAGCCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 72 bp | AACGGGATATCTTTAAACAGCTTGTGGTATTGTTGGTaGTATTTGCTCCGTAGTGTCCCTTCCCGGCTATAC | + |
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Preference number: 6 (lower is better) Translates to: NGISLNSLWYCW*YLLRSVPSRLY Trigger: GTATAGCCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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| CDS CAA 90 bp | TCCAACGGGATATCTTTAAACAGCTTGTGGTATTGTTGGTTGTATTaGCTCCGTAGTGTCCCTTCCCGGCTATACTTCTTTATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SNGISLNSLWYCWLY*LRSVPSRLYFFMSS Trigger: TGAAGACATAAAGAAGTATAGCCGGGAAGGGACACTACGGAGCAAATACAACCAACAATACCACAAGCTGTTTAAAGATATCCCGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098661.10 ENSMUST00000123914.8 ENSMUST00000128944.8 |
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