Pregenerated sensors for GRAMD1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036292Ensembl transcript IDs: ENSMUST00000036174.10, ENSMUST00000114677.2, ENSMUST00000179565.8, ENSMUST00000214098.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATaGCCCCCAGTCTTTATTGCTGAGTGCAAGTTTGTGTCCAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: SREPKLAPLNSGQLA*PPVFIAECKFVSSL Trigger: TAAGCTGGACACAAACTTGCACTCAGCAATAAAGACTGGGGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 90 bp | CGTGTTCTAGAAAGACAGCTAGAGAACAAAACAATAAATACGTCCTaGACATTTCCTAAATCCCGGGGGACGCAGCTAATTTCAAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: RVLERQLENKTINTS*TFPKSRGTQLISSQ Trigger: TTGACTTGAAATTAGCTGCGTCCCCCGGGATTTAGGAAATGTTCAGGACGTATTTATTGTTTTGTTCTCTAGCTGTCTTTCTAGAACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 90 bp | CAGCTTATAATTTGCCAGCAAGACAAGTTAGCTGCTACTGAAAAGTaGTTAATTATTTTCTACCTGATGGGCCACCTCTATCATGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: QLIICQQDKLAATEK*LIIFYLMGHLYHGC Trigger: ACACCCATGATAGAGGTGGCCCATCAGGTAGAAAATAATTAATCACTTTTCAGTAGCAGCTAACTTGTCTTGCTGGCAAATTATAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 90 bp | TTGTGTCCAGCTTATAATTTGCCAGCAAGACAAGTTAGCTGCTACTaGAAAGTGATTAATTATTTTCTACCTGATGGGCCACCTCTATCA | + |
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Preference number: 1 (lower is better) Translates to: LCPAYNLPARQVSCY*KVINYFLPDGPPLS Trigger: TGATAGAGGTGGCCCATCAGGTAGAAAATAATTAATCACTTTTCAGTAGCAGCTAACTTGTCTTGCTGGCAAATTATAAGCTGGACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCCCATCCTACCCACAGTaGCTTCCTTCCCCTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FSREPKLAPLNSGQLACPPSYPQ*LPSPFV Trigger: CACAAAAGGGGAAGGAAGGCACTGTGGGTAGGATGG...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGCCATCCTACCCACAGTaGCTTCCTTCCCCTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQPSYPQ*LPSPFV Trigger: CACAAAAGGGGAAGGAAGGCACTGTGGGTAGGATGG...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGTCCGGTCAGCTTGCATaGCCCCCAGTCTTTATTGCT | + |
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Preference number: 2 (lower is better) Translates to: GITPKPPAPGRLVRIHEESGQLA*PPVFIA Trigger: AGCAATAAAGACTGGGGGGCATGCAAGCTGACCGGA...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGTCCAGCTTATAATTTaGCAGCAAGACAAGTTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLVLTQVPEWFSREPKLAVQLII*QQDKLA Trigger: AGCTAACTTGTCTTGCTGGCAAATTATAAGCTGGAC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGATTCCTTCCAGATGTTaGCTTCTAGGTCCAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: GITPKPPAPGRLVRIHEEIPSRC*LLGPDV Trigger: GACATCTGGACCTAGAAGGCAACATCTGGAAGGAAT...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGTTAAAGATACAAGCCTaGAATGTATGCACTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PLVLTQVPEWFSREPKLALKIQA*NVCTWK Trigger: TTTCCAAGTGCATACATTCCAGGCTTGTATCTTTAA...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGCATTCAGATACAACATaGCCAATGACTCTTTCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GITPKPPAPGRLVRIHEEHSDTT*PMTLSD Trigger: GTCCGAAAGAGTCATTGGCCATGTTGTATCTGAATG...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGAGGGAAAGGAAACATTaGCTAAAGGCAATGGATATT | + |
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Preference number: 2 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQRERKH*LKAMDI Trigger: AATATCCATTGCCTTTAGTCAATGTTTCCTTTCCCT...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGTCCAGCTTATAATTTaGCAGCAAGACAAGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GITPKPPAPGRLVRIHEEVQLII*QQDKLA Trigger: AGCTAACTTGTCTTGCTGGCAAATTATAAGCTGGAC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGTCTAAGCATTACTCATaGACTCAATTTGATCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQSKHYS*TQFDLS Trigger: TGACAGATCAAATTGAGTCCATGAGTAATGCTTAGA...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAATTCCTTCCAGATGTTaGCTTCTAGGTCCAGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: LIQSLKLTARDFLCSYHKIPSRC*LLGPDV Trigger: GACATCTGGACCTAGAAGGCAACATCTGGAAGGAAT...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAACATTCAGATACAACATaGCCAATGACTCTTTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: LIQSLKLTARDFLCSYHKHSDTT*PMTLSD Trigger: GTCCGAAAGAGTCATTGGCCATGTTGTATCTGAATG...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR GCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGAATTCCTTCCAGATGTTaGCTTCTAGGTCCAGATGTC | + |
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Preference number: 2 (lower is better) Translates to: IYIYIPSFRYNMANDSFGIPSRC*LLGPDV Trigger: GACATCTGGACCTAGAAGGCAACATCTGGAAGGAAT...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCTTAAAGATACAAGCCTaGAATGTATGCACTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KLNLSITHGLNLICHGMPLKIQA*NVCTWK Trigger: TTTCCAAGTGCATACATTCCAGGCTTGTATCTTTAA...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR CAA 90 bp | ATGGGTGTTGCTAAGCTGAATCTAAGCATTACTCATGGACTCAATTaGATCTGTCATGGAATGCCCAGATTTTATAATAATCTTACGACT | + |
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Preference number: 2 (lower is better) Translates to: MGVAKLNLSITHGLN*ICHGMPRFYNNLTT Trigger: AGTCGTAAGATTATTATAAAATCTGGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTTAGCAACACCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR GCA 72 bp | CCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATaGCCCCCAGTCTTTATTGCTGAGTGCAAGTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: PKLAPLNSGQLA*PPVFIAECKFV Trigger: CACAAACTTGCACTCAGCAATAAAGACTGGGGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR CCA 72 bp | TTTCACAAACCACTGGTGCTGACACAAGTGCCTGAGTaGTTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: FHKPLVLTQVPE*FSREPKLAPLN Trigger: GTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGGTTTGTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCGCCTTCCTTCCCCTTTaGTGTCACAGAATTTCAATT | + |
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Preference number: 3 (lower is better) Translates to: FSREPKLAPLNSGQLACPAFLPL*CHRISI Trigger: AATTGAAATTCTGTGACACAAAAGGGGAAGGAAGGC...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCTGTCCAGCTTATAATTaGCCAGCAAGACAAGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: FSREPKLAPLNSGQLACPCPAYN*PARQVS Trigger: GCTAACTTGTCTTGCTGGCAAATTATAAGCTGGACA...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGTGTCCAGCTTATAATTaGCCAGCAAGACAAGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: PLVLTQVPEWFSREPKLACPAYN*PARQVS Trigger: GCTAACTTGTCTTGCTGGCAAATTATAAGCTGGACA...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 72 bp | AGTCGCCAAGTCCTTATTTTCACAAACCACTGGTGCTaGCACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SRQVLIFTNHWC*HKCLSGFPESP Trigger: TGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGGTTTGTGAAAATAAGGACTTGGCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGACTCATGGACTCAATTaGATCTGTCATGGAATGCCC | + |
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Preference number: 3 (lower is better) Translates to: GITPKPPAPGRLVRIHEETHGLN*ICHGMP Trigger: GGGCATTCCATGACAGATCAAATTGAGTCCATGAGT...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGCCTTCCTTCCCCTTTaGTGTCACAGAATTTCAATT | + |
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Preference number: 3 (lower is better) Translates to: GITPKPPAPGRLVRIHEEAFLPL*CHRISI Trigger: AATTGAAATTCTGTGACACAAAAGGGGAAGGAAGGC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGGAGGGAAAGGAAACATaGACTAAAGGCAATGGATAT | + |
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Preference number: 3 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQEGKET*TKGNGY Trigger: ATATCCATTGCCTTTAGTCAATGTTTCCTTTCCCTC...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGGCGTCTCAAAAACATaGTTAGCAATGACATTTGGC | + |
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Preference number: 3 (lower is better) Translates to: GITPKPPAPGRLVRIHEEGVSKT*LAMTFG Trigger: GCCAAATGTCATTGCTAACAATGTTTTTGAGACGCC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCGATTCCTTCCAGATGTaGCCTTCTAGGTCCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPDSFQM*PSRSRC Trigger: ACATCTGGACCTAGAAGGCAACATCTGGAAGGAATC...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGAGGGAAAGGAAACATaGACTAAAGGCAATGGATAT | + |
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Preference number: 3 (lower is better) Translates to: GITPKPPAPGRLVRIHEEEGKET*TKGNGY Trigger: ATATCCATTGCCTTTAGTCAATGTTTCCTTTCCCTC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGATTCCTTCCAGATGTaGCCTTCTAGGTCCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: LIQSLKLTARDFLCSYHKDSFQM*PSRSRC Trigger: ACATCTGGACCTAGAAGGCAACATCTGGAAGGAATC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCGATTCCTTCCAGATGTaGCCTTCTAGGTCCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: KLNLSITHGLNLICHGMPDSFQM*PSRSRC Trigger: ACATCTGGACCTAGAAGGCAACATCTGGAAGGAATC...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAATGTCCAGCTTATAATTaGCCAGCAAGACAAGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: LIQSLKLTARDFLCSYHKCPAYN*PARQVS Trigger: GCTAACTTGTCTTGCTGGCAAATTATAAGCTGGACA...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR-3UTR CAA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGGCGTCTCAAAAACATaGTTAGCAATGACATTTGGC | + |
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Preference number: 3 (lower is better) Translates to: LIQSLKLTARDFLCSYHKGVSKT*LAMTFG Trigger: GCCAAATGTCATTGCTAACAATGTTTTTGAGACGCC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 72 bp | CATATATATCCCTTCATTCAGATACAACATGGCCAATaGCTCTTTCGGACATACAAAAGGTCTGACCATTGG | + |
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Preference number: 3 (lower is better) Translates to: HIYPFIQIQHGQ*LFRTYKRSDHW Trigger: CCAATGGTCAGACCTTTTGTATGTCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| 3UTR TCA 72 bp | GCTTATAATTTGCCAGCAAGACAAGTTAGCTGCTACTaGAAAGTGATTAATTATTTTCTACCTGATGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: AYNLPARQVSCY*KVINYFLPDGP Trigger: TGGCCCATCAGGTAGAAAATAATTAATCACTTTTCAGTAGCAGCTAACTTGTCTTGCTGGCAAATTATAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGCTGAGAGGACAGCTTTaGAACGGGCTCTGCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLALRGQL*NGLCCP Trigger: CGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAG...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR GCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGCAGCGTCATCCACGCTaGTTCTTCCTGGACTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLAQRHPR*FFLDFL Trigger: CAAGAAGTCCAGGAAGAAGCAGCGTGGATGACGCTG...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR TCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGTCATGGTTCGCAGCTaGTTGCCTCCAGATTCAACT | + |
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Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLAVMVRS*LPPDST Trigger: AGTTGAATCTGGAGGCAATCAGCTGCGAACCATGAC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGGGTCTGCTTTTCTGTaGCAGCAGTATACTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLAGSAFL*QQYTSQ Trigger: CTGGGAAGTATACTGCTGCCACAGAAAAGCAGACCC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR TCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGAAGTAGCTCTCCAGTaGACTCCAGGAATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLAEVALQ*TPGILL Trigger: GAGAAGAATTCCTGGAGTTCACTGGAGAGCTACTTC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCACTTGGAGGGTGCTCTaGTTATCCTCTTTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSREPKLAPLNSGQLACPTWRVL*LSSFLK Trigger: CTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGT...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCTACCAGGTAGAACTGTaGTTCCCGGCTCTCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: FSREPKLAPLNSGQLACPYQVEL*FPALFI Trigger: TATAAAGAGAGCCGGGAAGCACAGTTCTACCTGGTA...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGCTGAGAGGACAGCTTTaGAACGGGCTCTGCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEELRGQL*NGLCCP Trigger: CGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAG...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCCTTGATAAGGCCCCATaGTTGTTTCCTGTACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSREPKLAPLNSGQLACPLDKAP*LFPVLQ Trigger: TTGAAGTACAGGAAACAACCATGGGGCCTTATCAAG...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGCTTGATAAGGCCCCATaGTTGTTTCCTGTACTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLALDKAP*LFPVLQ Trigger: TTGAAGTACAGGAAACAACCATGGGGCCTTATCAAG...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGTCATGGTTCGCAGCTaGTTGCCTCCAGATTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEVMVRS*LPPDST Trigger: AGTTGAATCTGGAGGCAATCAGCTGCGAACCATGAC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGGGTCTGCTTTTCTGTaGCAGCAGTATACTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEGSAFL*QQYTSQ Trigger: CTGGGAAGTATACTGCTGCCACAGAAAAGCAGACCC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGTGTACTTCAAGTCTGTaGAGACTCTCAGCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQCTSSL*RLSACI Trigger: GATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACA...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCCTGAGAGGACAGCTTTaGAACGGGCTCTGCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPLRGQL*NGLCCP Trigger: CGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAG...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGTTCCAACATCACTATaGAATCTTGGAGTACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVLTQVPEWFSREPKLAVPTSL*NLGVLL Trigger: AAGGAGTACTCCAAGATTCCATAGTGATGTTGGAAC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGTTCGTCCACAGAATCTaGAGTGCTGCTTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQFVHRI*SAAFIQ Trigger: CTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAA...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGTGGAGACTCTCAGCCTaGATCTCTGTTTTGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEWRLSA*ISVLQI Trigger: GATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCA...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGTTCGTCCACAGAATCTaGAGTGCTGCTTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEFVHRI*SAAFIQ Trigger: CTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAA...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCCAGCGTCATCCACGCTaGTTCTTCCTGGACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPQRHPR*FFLDFL Trigger: CAAGAAGTCCAGGAAGAAGCAGCGTGGATGACGCTG...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGCCTGCATCTCTGTTTTaGAGATCTCACGATACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEPASLF*RSHDTV Trigger: TACTGTATCGTGAGATCTGCAAAACAGAGATGCAGG...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCCACGCTGCTTCTTCCTaGACTTCTTGGCTGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPHAASS*TSWLHI Trigger: AATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCGTG...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCGGGTCTGCTTTTCTGTaGCAGCAGTATACTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPGSAFL*QQYTSQ Trigger: CTGGGAAGTATACTGCTGCCACAGAAAAGCAGACCC...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCGAAGTAGCTCTCCAGTaGACTCCAGGAATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPEVALQ*TPGILL Trigger: GAGAAGAATTCCTGGAGTTCACTGGAGAGCTACTTC...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGGAATTTGCAAATCTCTaGATAAAGTGTGAGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQEFANL*IKCELV Trigger: CACTAGCTCACACTTTATGCAGAGATTTGCAAATTC...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCACTTGGAGGGTGCTCTaGTTATCCTCTTTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPTWRVL*LSSFLK Trigger: CTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGT...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGGAATTTGCAAATCTCTaGATAAAGTGTGAGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GITPKPPAPGRLVRIHEEEFANL*IKCELV Trigger: CACTAGCTCACACTTTATGCAGAGATTTGCAAATTC...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCCCTGGACTTCTTGGCTaGACATTTTCTTCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPPGLLG*TFSSTD Trigger: ATCAGTTGAAGAAAATGTGCAGCCAAGAAGTCCAGG...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCCACGCTGCTTCTTCCTaGACTTCTTGGCTGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPHAASS*TSWLHI Trigger: AATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCGTG...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGAAGTAGCTCTCCAGTaGACTCCAGGAATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKEVALQ*TPGILL Trigger: GAGAAGAATTCCTGGAGTTCACTGGAGAGCTACTTC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCCAGAATCTGAAGTGCTaGTTTTATCCAGAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPQNLKC*FYPEKG Trigger: ACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTG...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCTGGAGACTCTCAGCCTaGATCTCTGTTTTGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPWRLSA*ISVLQI Trigger: GATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCA...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAATGGAGACTCTCAGCCTaGATCTCTGTTTTGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKWRLSA*ISVLQI Trigger: GATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCA...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCTGTACTTCAAGTCTGTaGAGACTCTCAGCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPCTSSL*RLSACI Trigger: GATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACA...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAATGTACTTCAAGTCTGTaGAGACTCTCAGCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKCTSSL*RLSACI Trigger: GATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACA...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTTCTTCTTACCTTTTTAGGCTCTTAAACTCAGTTACAAACGCAGCCCCCGTTCCAACATCACTATaGAATCTTGGAGTACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSYLFRLLNSVTNAAPVPTSL*NLGVLL Trigger: AAGGAGTACTCCAAGATTCCATAGTGATGTTGGAAC...GGGGGCTGCGTTTGTAACTGAGTTTAAGAGCCTAAAAAGGTAAGAAGAAACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCACTTGGAGGGTGCTCTaGTTATCCTCTTTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPTWRVL*LSSFLK Trigger: CTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGT...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCCCTGGACTTCTTGGCTaGACATTTTCTTCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPPGLLG*TFSSTD Trigger: ATCAGTTGAAGAAAATGTGCAGCCAAGAAGTCCAGG...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAACCTGGACTTCTTGGCTaGACATTTTCTTCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKPGLLG*TFSSTD Trigger: ATCAGTTGAAGAAAATGTGCAGCCAAGAAGTCCAGG...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAACCTGCATCTCTGTTTTaGAGATCTCACGATACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKPASLF*RSHDTV Trigger: TACTGTATCGTGAGATCTGCAAAACAGAGATGCAGG...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCCCTGCATCTCTGTTTTaGAGATCTCACGATACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLNLSITHGLNLICHGMPPASLF*RSHDTV Trigger: TACTGTATCGTGAGATCTGCAAAACAGAGATGCAGG...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGACACGCTGCTTCTTCCTaGACTTCTTGGCTGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: IYIYIPSFRYNMANDSFGHAASS*TSWLHI Trigger: AATGTGCAGCCAAGAAGTCCAGGAAGAAGCAGCGTG...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAACATTTCTCTCGCTCTaGGAATCCTCTTTTCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKTFLSL*ESSFPS Trigger: ACTAGGAAAAGAGGATTCCCAGAGCGAGAGAAATGT...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CCA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGTTCCAACATCACTATaGAATCTTGGAGTACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIQSLKLTARDFLCSYHKVPTSL*NLGVLL Trigger: AAGGAGTACTCCAAGATTCCATAGTGATGTTGGAAC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR TCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGATTCGTCCACAGAATCTaGAGTGCTGCTTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYIYIPSFRYNMANDSFGFVHRI*SAAFIQ Trigger: CTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAA...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGATACCAGGTAGAACTGTaGTTCCCGGCTCTCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYIPSFRYNMANDSFGYQVEL*FPALFI Trigger: TATAAAGAGAGCCGGGAAGCACAGTTCTACCTGGTA...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR GCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGATCTTTATACAGGGTCTaGTTTTCTGTGGCAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IYIYIPSFRYNMANDSFGSLYRV*FSVAAV Trigger: TACTGCTGCCACAGAAAAGCAGACCCTGTATAAAGA...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CCA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGATCTTCCTGGACTTCTTaGCTGCACATTTTCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIYIPSFRYNMANDSFGSSWTS*LHIFFN Trigger: GTTGAAGAAAATGTGCAGCCAAGAAGTCCAGGAAGA...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS CCA 90 bp | GGCCTCGAAGCCCAAATCTGTGGAAGAGCGCTGAGAGGACAGCTTTaGAACGGGCTCTGCTGTCCGGTTCAAGGTCCGCCTTCTCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLEAQICGRALRGQL*NGLCCPVQGPPSPA Trigger: CGCCGGAGAAGGCGGACCTTGAACCGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAGCGCTCTTCCACAGATTTGGGCTTCGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCGATAAGGCCCCATGGTaGTTTCCTGTACTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSREPKLAPLNSGQLACPDKAPW*FPVLQV Trigger: GACTTGAAGTACAGGAAACAACCATGGGGCCTTATC...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCCCTGTAACATCTACTTaGGCCTCGAAGCCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FSREPKLAPLNSGQLACPPVTST*ASKPKS Trigger: AGATTTGGGCTTCGAGGCCAAAGTAGATGTTACAGG...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS TCA 90 bp | GTAACATCTACTTTGGCCTCGAAGCCCAAATCTGTGGAAGAGCGCTaGGAGGACAGCTTTGGAACGGGCTCTGCTGTCCGGTTCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTSTLASKPKSVEER*EDSFGTGSAVRFKV Trigger: GACCTTGAACCGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAGCGCTCTTCCACAGATTTGGGCTTCGAGGCCAAAGTAGATGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGTAAAGCTGACGGCCTaGGAGAACTTCTCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVLTQVPEWFSREPKLAVKLTA*ENFSSL Trigger: AAGAGATGAGAAGTTCTCCAAGGCCGTCAGCTTTAC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS GCA 90 bp | GGGCACATCATGTGTCAGCACTTCGGAGTCTACCAGGTAGAACTGTaGTTCCCGGCTCTCTTTATACAGGGTCTGCTTTTCTGTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHIMCQHFGVYQVEL*FPALFIQGLLFCGS Trigger: GCTGCCACAGAAAAGCAGACCCTGTATAAAGAGAGCCGGGAAGCACAGTTCTACCTGGTAGACTCCGAAGTGCTGACACATGATGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 90 bp | CCTCCCCTGAACCAAGATATCCTTCTGGAGAGCGCAAGCATAATCTaGTATCAGCTTCTCCGAGTCCGGCAGGTGTGTGAACTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPLNQDILLESASII*YQLLRVRQVCELLS Trigger: AGACAGCAGTTCACACACCTGCCGGACTCGGAGAAGCTGATAGCAGATTATGCTTGCGCTCTCCAGAAGGATATCTTGGTTCAGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS TCA 90 bp | TCTGCTTTTCTGTGGCAGCAGTATACTTCCCAGTTAGCGGGTTGCTaGGGACTATGGTATAGGTCATGGTTCGCAGCTGATTGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAFLWQQYTSQLAGC*GLWYRSWFAADCLQ Trigger: CTGGAGGCAATCAGCTGCGAACCATGACCTATACCATAGTCCTCAGCAACCCGCTAACTGGGAAGTATACTGCTGCCACAGAAAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGGCCTGCATCTCTGTTTaGCAGATCTCACGATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQACISV*QISRYS Trigger: ACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGC...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGGATAAGGCCCCATGGTaGTTTCCTGTACTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQDKAPW*FPVLQV Trigger: GACTTGAAGTACAGGAAACAACCATGGGGCCTTATC...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | TTTTCCCGAGAGCCCAAGCTTGCGCCTCTCAACTCCGGTCAGCTTGCATGCCCCGAATATTTTCTGTTCTaGAGAACCTGTCAGAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: FSREPKLAPLNSGQLACPEYFLF*RTCQRL Trigger: TAGTCTCTGACAGGTTCTCAAGAACAGAAAATATTC...GGGGCATGCAAGCTGACCGGAGTTGAGAGGCGCAAGCTTGGGCTCTCGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGCCTGTAACATCTACTTaGGCCTCGAAGCCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: GITPKPPAPGRLVRIHEEPVTST*ASKPKS Trigger: AGATTTGGGCTTCGAGGCCAAAGTAGATGTTACAGG...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | CCACTGGTGCTGACACAAGTGCCTGAGTGGTTTTCCCGAGAGCCCAAGCTTGCGGAATATTTTCTGTTCTaGAGAACCTGTCAGAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: PLVLTQVPEWFSREPKLAEYFLF*RTCQRL Trigger: TAGTCTCTGACAGGTTCTCAAGAACAGAAAATATTC...CGCAAGCTTGGGCTCTCGGGAAAACCACTCAGGCACTTGTGTCAGCACCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS TCA 90 bp | CGCAAGCATAATCTGCTATCAGCTTCTCCGAGTCCGGCAGGTGTGTaGACTGCTGTCTGTATTCCTCATTCCTGTCTTTATAGGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKHNLLSASPSPAGV*TAVCIPHSCLYRWN Trigger: GTTCCACCTATAAAGACAGGAATGAGGAATACAGACAGCAGTTCACACACCTGCCGGACTCGGAGAAGCTGATAGCAGATTATGCTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGACAGCCACCCCAGACTaGTTCTTATTTAGTAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQTATPD*FLFSKS Trigger: TGATTTACTAAATAAGAACAAGTCTGGGGTGGCTGT...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGAACAGAACAGAACAGAAGGTATTACTCCGAAGCCCCCTGCCCCAGGATATAAAGTCTTCCTaGAAGATCTTTCTCGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AEQNRTEQKVLLRSPLPQDIKSS*KIFLGN Trigger: ATTCCCGAGAAAGATCTTCAAGGAAGACTTTATATC...CTGGGGCAGGGGGCTTCGGAGTAATACCTTCTGTTCTGTTCTGTTCTGTTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGTTCTCAATTAAAGACTaGATAAGGCCCCATGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GITPKPPAPGRLVRIHEEFSIKD*IRPHGC Trigger: ACAACCATGGGGCCTTATCAAGTCTTTAATTGAGAA...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | GGTATTACTCCGAAGCCCCCTGCCCCAGGGAGATTAGTTAGGATTCATGAAGAGACAGCCACCCCAGACTaGTTCTTATTTAGTAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GITPKPPAPGRLVRIHEETATPD*FLFSKS Trigger: TGATTTACTAAATAAGAACAAGTCTGGGGTGGCTGT...CTCTTCATGAATCCTAACTAATCTCCCTGGGGCAGGGGGCTTCGGAGTAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS GCA 90 bp | CCCATGGTTGTTTCCTGTACTTCAAGTCTGTGGAGACTCTCAGCCTaGATCTCTGTTTTGCAGATCTCACGATACAGTATCTGTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PMVVSCTSSLWRLSA*ISVLQISRYSICSK Trigger: CTTTGAACAGATACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACAGGAAACAACCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CCA 90 bp | TCCGCCTTCTCCGGCGTAGGCTGCTATGTTTTCCAGCATCTTCAATaGATTGACTCAACACAGACTCTTCCATTAACAAATCGGATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SAFSGVGCYVFQHLQ*IDSTQTLPLTNRIQ Trigger: TTGAATCCGATTTGTTAATGGAAGAGTCTGTGTTGAGTCAATCCATTGAAGATGCTGGAAAACATAGCAGCCTACGCCGGAGAAGGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 90 bp | CCTGTACTTCAAGTCTGTGGAGACTCTCAGCCTGCATCTCTGTTTTaGAGATCTCACGATACAGTATCTGTTCAAAGTGTAGAAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVLQVCGDSQPASLF*RSHDTVSVQSVEVV Trigger: GACTACTTCTACACTTTGAACAGATACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS TCA 90 bp | CTTCTCCGGCGTAGGCTGCTATGTTTTCCAGCATCTTCAATGGATTaGCTCAACACAGACTCTTCCATTAACAAATCGGATTCAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRRRLLCFPASSMD*LNTDSSINKSDSSF Trigger: AAAGCTTGAATCCGATTTGTTAATGGAAGAGTCTGTGTTGAGTCAATCCATTGAAGATGCTGGAAAACATAGCAGCCTACGCCGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CCA 90 bp | TTTTATCCAGAGAAAGGTACTCATTCTTATTCAAGTCCAGTGACTTaGAGGGTGCTCTGCTTATCCTCTTTTCTGAAGCTAGCGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FYPEKGTHSYSSPVT*RVLCLSSFLKLAKD Trigger: GTCCTTCGCTAGCTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGTCACTGGACTTGAATAAGAATGAGTACCTTTCTCTGGATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGTAAAGCTGACGGCCTaGGAGAACTTCTCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIQSLKLTARDFLCSYHKVKLTA*ENFSSL Trigger: AAGAGATGAGAAGTTCTCCAAGGCCGTCAGCTTTAC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCGCCTGCATCTCTGTTTaGCAGATCTCACGATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLNLSITHGLNLICHGMPACISV*QISRYS Trigger: ACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGC...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | CTAATCCAGTCACTCAAACTCACAGCCAGAGACTTCCTATGTTCTTATCACAAAGATAAGGCCCCATGGTaGTTTCCTGTACTTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIQSLKLTARDFLCSYHKDKAPW*FPVLQV Trigger: GACTTGAAGTACAGGAAACAACCATGGGGCCTTATC...TTTGTGATAAGAACATAGGAAGTCTCTGGCTGTGAGTTTGAGTGACTGGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCCCTGTAACATCTACTTaGGCCTCGAAGCCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: KLNLSITHGLNLICHGMPPVTST*ASKPKS Trigger: AGATTTGGGCTTCGAGGCCAAAGTAGATGTTACAGG...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS GCA 90 bp | AAAGGTACTCATTCTTATTCAAGTCCAGTGACTTGGAGGGTGCTCTaGTTATCCTCTTTTCTGAAGCTAGCGAAGGACTTTTTCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KGTHSYSSPVTWRVL*LSSFLKLAKDFFSH Trigger: ATGTGAGAAAAAGTCCTTCGCTAGCTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGTCACTGGACTTGAATAAGAATGAGTACCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 90 bp | GATCTTTCTCGGGAATATTTTCTTCGTCCACAGAATCTGAAGTGCTaGTTTTATCCAGAGAAAGGTACTCATTCTTATTCAAGTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLSREYFLRPQNLKC*FYPEKGTHSYSSPV Trigger: CACTGGACTTGAATAAGAATGAGTACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAAGAAAATATTCCCGAGAAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGAGTAAAGCTGACGGCCTaGGAGAACTTCTCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYIPSFRYNMANDSFGVKLTA*ENFSSL Trigger: AAGAGATGAGAAGTTCTCCAAGGCCGTCAGCTTTAC...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGAGCCTGCATCTCTGTTTaGCAGATCTCACGATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYIPSFRYNMANDSFGACISV*QISRYS Trigger: ACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGC...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCTTCTCAATTAAAGACTaGATAAGGCCCCATGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLNLSITHGLNLICHGMPFSIKD*IRPHGC Trigger: ACAACCATGGGGCCTTATCAAGTCTTTAATTGAGAA...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS GCA 90 bp | GAAGATCTTTCTCGGGAATATTTTCTTCGTCCACAGAATCTGAAGTaGTGCTTTTATCCAGAGAAAGGTACTCATTCTTATTCAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EDLSREYFLRPQNLK*CFYPEKGTHSYSSP Trigger: TGGACTTGAATAAGAATGAGTACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAAGAAAATATTCCCGAGAAAGATCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS-3UTR CAA 90 bp | AAGCTGAATCTAAGCATTACTCATGGACTCAATTTGATCTGTCATGGAATGCCCGAATATTTTCTGTTCTaGAGAACCTGTCAGAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: KLNLSITHGLNLICHGMPEYFLF*RTCQRL Trigger: TAGTCTCTGACAGGTTCTCAAGAACAGAAAATATTC...GGGCATTCCATGACAGATCAAATTGAGTCCATGAGTAATGCTTAGATTCAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
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| CDS-3UTR CAA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGATTCTCAATTAAAGACTaGATAAGGCCCCATGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYIPSFRYNMANDSFGFSIKD*IRPHGC Trigger: ACAACCATGGGGCCTTATCAAGTCTTTAATTGAGAA...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CAA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGAACAGCCACCCCAGACTaGTTCTTATTTAGTAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: IYIYIPSFRYNMANDSFGTATPD*FLFSKS Trigger: TGATTTACTAAATAAGAACAAGTCTGGGGTGGCTGT...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS-3UTR CAA 90 bp | ATATACATATATATCCCTTCATTCAGATACAACATGGCCAATGACTCTTTCGGAGATATAAAGTCTTCCTaGAAGATCTTTCTCGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IYIYIPSFRYNMANDSFGDIKSS*KIFLGN Trigger: ATTCCCGAGAAAGATCTTCAAGGAAGACTTTATATC...TCCGAAAGAGTCATTGGCCATGTTGTATCTGAATGAAGGGATATATATGTATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 |
||
| CDS CCA 72 bp | GCCCAAATCTGTGGAAGAGCGCTGAGAGGACAGCTTTaGAACGGGCTCTGCTGTCCGGTTCAAGGTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AQICGRALRGQL*NGLCCPVQGPP Trigger: AGGCGGACCTTGAACCGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAGCGCTCTTCCACAGATTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS TCA 72 bp | ACTTTGGCCTCGAAGCCCAAATCTGTGGAAGAGCGCTaGGAGGACAGCTTTGGAACGGGCTCTGCTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLASKPKSVEER*EDSFGTGSAVR Trigger: CCGGACAGCAGAGCCCGTTCCAAAGCTGTCCTCTCAGCGCTCTTCCACAGATTTGGGCTTCGAGGCCAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 72 bp | CTGTCCGGTTCAAGGTCCGCCTTCTCCGGCGTAGGCTaGTATGTTTTCCAGCATCTTCAATGGATTGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LSGSRSAFSGVG*YVFQHLQWIDS Trigger: TGAGTCAATCCATTGAAGATGCTGGAAAACATAGCAGCCTACGCCGGAGAAGGCGGACCTTGAACCGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS TCA 72 bp | CTGTGGCAGCAGTATACTTCCCAGTTAGCGGGTTGCTaGGGACTATGGTATAGGTCATGGTTCGCAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LWQQYTSQLAGC*GLWYRSWFAAD Trigger: ATCAGCTGCGAACCATGACCTATACCATAGTCCTCAGCAACCCGCTAACTGGGAAGTATACTGCTGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 72 bp | AACCAAGATATCCTTCTGGAGAGCGCAAGCATAATCTaGTATCAGCTTCTCCGAGTCCGGCAGGTGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: NQDILLESASII*YQLLRVRQVCE Trigger: TTCACACACCTGCCGGACTCGGAGAAGCTGATAGCAGATTATGCTTGCGCTCTCCAGAAGGATATCTTGGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS GCA 72 bp | AGTGTTCCATTTCTTCAGCGTTTAAGCCTAGCTCCGTaGCATAGTTCTGCTGGAGCAGTTGCCAGAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVPFLQRLSLAP*HSSAGAVARTP Trigger: AGGAGTTCTGGCAACTGCTCCAGCAGAACTATGGCACGGAGCTAGGCTTAAACGCTGAAGAAATGGAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS CCA 72 bp | ACTGCTGTCTGTATTCCTCATTCCTGTCTTTATAGGTaGAACTCGAGATCCAAAAGCTCCAGTCGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TAVCIPHSCLYR*NSRSKSSSRRS Trigger: GGAGCGGCGACTGGAGCTTTTGGATCTCGAGTTCCACCTATAAAGACAGGAATGAGGAATACAGACAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS TCA 72 bp | AATCTGCTATCAGCTTCTCCGAGTCCGGCAGGTGTGTaGACTGCTGTCTGTATTCCTCATTCCTGTCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: NLLSASPSPAGV*TAVCIPHSCLY Trigger: ATAAAGACAGGAATGAGGAATACAGACAGCAGTTCACACACCTGCCGGACTCGGAGAAGCTGATAGCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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| CDS GCA 72 bp | CATTCTTATTCAAGTCCAGTGACTTGGAGGGTGCTCTaGTTATCCTCTTTTCTGAAGCTAGCGAAGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: HSYSSPVTWRVL*LSSFLKLAKDF Trigger: AAAGTCCTTCGCTAGCTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGTCACTGGACTTGAATAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CAA 90 bp | TCCTGTACTTCAAGTCTGTGGAGACTCTCAGCCTGCATCTCTGTTTaGCAGATCTCACGATACAGTATCTGTTCAAAGTGTAGAAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SCTSSLWRLSACISV*QISRYSICSKCRSS Trigger: ACTACTTCTACACTTTGAACAGATACTGTATCGTGAGATCTGCAAAACAGAGATGCAGGCTGAGAGTCTCCACAGACTTGAAGTACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CCA 72 bp | GAGAAAGGTACTCATTCTTATTCAAGTCCAGTGACTTaGAGGGTGCTCTGCTTATCCTCTTTTCTGAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: EKGTHSYSSPVT*RVLCLSSFLKL Trigger: TAGCTTCAGAAAAGAGGATAAGCAGAGCACCCTCCAAGTCACTGGACTTGAATAAGAATGAGTACCTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS TCA 72 bp | CGTAGGCTGCTATGTTTTCCAGCATCTTCAATGGATTaGCTCAACACAGACTCTTCCATTAACAAATCGGAT | + |
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Preference number: 6 (lower is better) Translates to: RRLLCFPASSMD*LNTDSSINKSD Trigger: ATCCGATTTGTTAATGGAAGAGTCTGTGTTGAGTCAATCCATTGAAGATGCTGGAAAACATAGCAGCCTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CAA 72 bp | TCCAGTGAACTCCAGGAATTCTTCTCAATTAAAGACTaGATAAGGCCCCATGGTTGTTTCCTGTACTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSELQEFFSIKD*IRPHGCFLYFK Trigger: CTTGAAGTACAGGAAACAACCATGGGGCCTTATCAAGTCTTTAATTGAGAAGAATTCCTGGAGTTCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS TCA 72 bp | ATCTTTCTCGGGAATATTTTCTTCGTCCACAGAATCTaGAGTGCTGCTTTTATCCAGAGAAAGGTACTCATT | + |
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Preference number: 6 (lower is better) Translates to: IFLGNIFFVHRI*SAAFIQRKVLI Trigger: AATGAGTACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAAGAAAATATTCCCGAGAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 72 bp | CGGGAATATTTTCTTCGTCCACAGAATCTGAAGTGCTaGTTTTATCCAGAGAAAGGTACTCATTCTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: REYFLRPQNLKC*FYPEKGTHSYS Trigger: TGAATAAGAATGAGTACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAAGAAAATATTCCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS GCA 72 bp | TCTCGGGAATATTTTCTTCGTCCACAGAATCTGAAGTaGTGCTTTTATCCAGAGAAAGGTACTCATTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SREYFLRPQNLK*CFYPEKGTHSY Trigger: ATAAGAATGAGTACCTTTCTCTGGATAAAAGCAGCACTTCAGATTCTGTGGACGAAGAAAATATTCCCGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036174.10 ENSMUST00000114677.2 ENSMUST00000179565.8 ENSMUST00000214098.2 |
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| CDS CAA 72 bp | TGGATAGCATTTGGGATGAGTCGAGCAGTTTTCTCCTaGGTCATAAAGGTTATATTCTTTAAAGCAATAGAA | + |
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Preference number: 6 (lower is better) Translates to: WIAFGMSRAVFS*VIKVIFFKAIE Trigger: TTCTATTGCTTTAAAGAATATAACCTTTATGACCAAGGAGAAAACTGCTCGACTCATCCCAAATGCTATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214098.2 |
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