Pregenerated sensors for GPX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021760Ensembl transcript IDs: ENSMUST00000022282.6, ENSMUST00000231962.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTGTGATACATGAGGTCTaGTGGCTTCAAGGGGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WHPHSVPGPMWCVLFPQGVIHEV*WLQGVL Trigger: AAGAACCCCTTGAAGCCATCAGACCTCATGTATCAC...ACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTATCATTTGTGATACATaGGGTCTGATGGCTTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GTLTVFRVPCGVCFSHKVIICDT*GLMASR Trigger: CCTTGAAGCCATCAGACCTCATGTATCACAAATGAT...AACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGTCCCATGTTCTGTCCTGTTGTACTaGCCTGACTCCACGGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ARVSYSKNGTLTVFRVPCSVLLY*PDSTVV Trigger: AACCACCGTGGAGTCAGGCCAGTACAACAGGACAGA...ACATGGGACCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTTAAGTCTGTCCTGTTGTACTaGCCTGACTCCACGGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSHVVCAFPTRLILEKVKSVLLY*PDSTVV Trigger: AACCACCGTGGAGTCAGGCCAGTACAACAGGACAGA...CTTAACTTTCTCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTATTGGTGACTGAACATTCTAGATTTTTCCTTCTGGTCAATAGAAGTAATCCTGTTGTACTGGCCTaGCTCCACGGTGGTTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RVLVTEHSRFFLLVNRSNPVVLA*LHGGFI Trigger: TATGAAACCACCGTGGAGTCAGGCCAGTACAACAGG...ATTACTTCTATTGACCAGAAGGAAAAATCTAGAATGTTCAGTCACCAATACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGGTTCCGGGTCCCATGTaGTGTGTGCTTTTCCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LYILLQLELVTPKMAPSQVPGPM*CVLFPQ Trigger: TTGTGGGAAAAGCACACACCACATGGGACCCGGAAC...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCTTGTACCGTATGTTTTaGAATCTAAAACCTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RFFLLVNRSNILHHGLASLYRMF*NLKPLS Trigger: GGACAGAGGTTTTAGATTCCAAAACATACGGTACAA...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTATTGGTGACTGAACATTCTAGATTTTTCCTTCTGGTCAATAGAAGTAATTTGTACCGTATGTTTTaGAATCTAAAACCTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RVLVTEHSRFFLLVNRSNLYRMF*NLKPLS Trigger: GGACAGAGGTTTTAGATTCCAAAACATACGGTACAA...ATTACTTCTATTGACCAGAAGGAAAAATCTAGAATGTTCAGTCACCAATACCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTAAAACCTCTGTCCTGTaGTACTGGCCTGACTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: WHPHSVPGPMWCVLFPQGKTSVL*YWPDST Trigger: CGTGGAGTCAGGCCAGTACAACAGGACAGAGGTTTT...ACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTTAAGTaGGACAACAGTGAAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSQCSGSHVVCAFPTRLILEKVK*DNSEGY Trigger: ATACCCTTCACTGTTGTCCAACTTAACTTTCTCTAG...GATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCAAAACCTCTGTCCTGTaGTACTGGCCTGACTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: ILLQLELVTPKMAPSQCSKTSVL*YWPDST Trigger: CGTGGAGTCAGGCCAGTACAACAGGACAGAGGTTTT...GGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGCTAGAGAAAGTTAAGTaGGACAACAGTGAAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLQLELVTPKMAPSQCSGLEKVK*DNSEGY Trigger: ATACCCTTCACTGTTGTCCAACTTAACTTTCTCTAG...CCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR TCA 72 bp | TTTTTAAGAATAATTTGCCCAATCATTTGTGATACATaGGGTCTGATGGCTTCAAGGGGTTCTTCTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLRIICPIICDT*GLMASRGSSGL Trigger: GAGGCCAGAAGAACCCCTTGAAGCCATCAGACCTCATGTATCACAAATGATTGGGCAAATTATTCTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| 3UTR TCA 72 bp | GAGAAAGTTAAGTTGGACAACAGTGAAGGGTATTGGTaGCTGAACATTCTAGATTTTTCCTTCTGGTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: EKVKLDNSEGYW*LNILDFSFWSI Trigger: TATTGACCAGAAGGAAAAATCTAGAATGTTCAGTCACCAATACCCTTCACTGTTGTCCAACTTAACTTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| 3UTR TCA 72 bp | CTCTTTCTTTTTAAGAATAATTTGCCCAATCATTTGTaGTACATGAGGTCTGATGGCTTCAAGGGGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLFKNNLPNHL*YMRSDGFKGFF Trigger: GAAGAACCCCTTGAAGCCATCAGACCTCATGTATCACAAATGATTGGGCAAATTATTCTTAAAAAGAAAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| CDS-3UTR TCA 90 bp | GGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTGAAAAGCCAGGACGTTaGAGTGATAGGGCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GTLTVFRVPCGVCFSHKVEKPGR*SDRART Trigger: AGTTCGGGCCCTATCACTTCAACGTCCTGGCTTTTC...AACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCGGGAAGCTTTGCCTTTaGACTTTTCCAGAGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQCSGSHVVCAFPTRLIGKLCL*TFPETR Trigger: CCGTGTCTCTGGAAAAGTTCAAAGGCAAAGCTTCCC...GATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | GGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTCTTGTCCCTCAGGGTTaGCCAGATACTTCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTLTVFRVPCGVCFSHKVLVPQG*PDTSKN Trigger: ATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAG...AACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACATTCAAGGGGTTCTTCTaGCCTCCAGAACTTCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: KMAPSQCSGSHVVCAFPTFKGFF*PPELHD Trigger: GTCGTGAAGTTCTGGAGGCCAGAAGAACCCCTTGAA...TGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR GCA 90 bp | CCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCAAGATTCTACCTCCTTaGTGGACTTGGGCTCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSQCSGSHVVCAFPTRLIKILPP*WTWAPI Trigger: AATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTT...GATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTGGAAGATGGGGAATGTaGCTCCGTAGTTCTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRVPCGVCFSHKVNPRESGRWGM*LRSSVS Trigger: CGAGACAGAACTACGGAGTCACATTCCCCATCTTCC...ACTTTCTCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR GCA 90 bp | AAAATGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAATTCTCCAAACTGATTaGACGGAAAAGCCAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KMAPSQCSGSHVVCAFPTILQTD*TEKPGR Trigger: ACGTCCTGGCTTTTCCGTGCAATCAGTTTGGAGAAT...TGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | TCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTTATCATTTGTGATACATaGGGTCTGATGGCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHVVCAFPTRLILEKVIICDT*GLMASR Trigger: CCTTGAAGCCATCAGACCTCATGTATCACAAATGAT...AACTTTCTCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | ACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGTCCCATTCAGGAATTTTAACTaGAGGAGAAAAAGCATCACG | + |
|
Preference number: 4 (lower is better) Translates to: TARVSYSKNGTLTVFRVPFRNFN*RRKSIT Trigger: CGTGATGCTTTTTCTCCTTCAGTTAAAATTCCTGAA...TGGGACCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR TCA 90 bp | TTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGCTTGTCCCTCAGGGTTaGCCAGATACTTCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLELVTPKMAPSQCSGLVPQG*PDTSKN Trigger: ATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAG...CCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR GCA 90 bp | TCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTTAACTGCAAATATCTTTaGTTTGGGCCCGGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSHVVCAFPTRLILEKVNCKYL*FGPGTF Trigger: AAATGTTCCGGGCCCAAAGCAAAGATATTTGCAGTT...AACTTTCTCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCCCTCCTTGCTGGACTTaGGCTCCGATTCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RFFLLVNRSNILHHGLASPPCWT*APILQT Trigger: AGTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGG...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | TTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGGAAGAATTTTGCCTTTaGACTTTTCCAGAGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQLELVTPKMAPSQCSGEEFCL*TFPETR Trigger: CCGTGTCTCTGGAAAAGTTCAAAGGCAAAATTCTTC...CCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | TCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGAGAAAGTTCAAATATCTTTGCTTTaGGCCCGGAACATTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SGSHVVCAFPTRLILEKVQISLL*ARNILM Trigger: CATTAAAATGTTCCGGGCCCAAAGCAAAGATATTTG...AACTTTCTCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCATTCTACCTCCTTGCTaGACTTGGGCTCCGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFFLLVNRSNILHHGLASILPPC*TWAPIL Trigger: GAGAATCGGAGCCCAAGTCCAGCAAGGAGGTAGAAT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCGTGATACATGAGGTCTaGTGGCTTCAAGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFFLLVNRSNILHHGLASVIHEV*WLQGVL Trigger: AAGAACCCCTTGAAGCCATCAGACCTCATGTATCAC...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR TCA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTCCGATTCTCCAAACTaGTTGCACGGAAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLQLELVTPKMAPSQSDSPN*LHGKAR Trigger: CCTGGCTTTTCCGTGCAATCAGTTTGGAGAATCGGA...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCACACGGTCCTTCCTTTaGCATCCTTTACTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFFLLVNRSNILHHGLASTRSFL*HPLLQR Trigger: CCTTTGAAGTAAAGGATGCCAAAGGAAGGACCGTGT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR GCA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCAACTGCAAATATCTTTaGTTTGGGCCCGGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RFFLLVNRSNILHHGLASNCKYL*FGPGTF Trigger: AAATGTTCCGGGCCCAAAGCAAAGATATTTGCAGTT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGACACGGTCCTTCCTTTaGCATCCTTTACTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYILLQLELVTPKMAPSQTRSFL*HPLLQR Trigger: CCTTTGAAGTAAAGGATGCCAAAGGAAGGACCGTGT...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCTTCAGGAATTTTAACTaGAGGAGAAAAAGCATCACG | + |
|
Preference number: 4 (lower is better) Translates to: ILLQLELVTPKMAPSQCSFRNFN*RRKSIT Trigger: CGTGATGCTTTTTCTCCTTCAGTTAAAATTCCTGAA...GGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CCA 90 bp | GATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCAAAAATCTTAATCTTGTaGAAGATGGGGAATGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DFSFWSIEVIYFIMGWPPKILIL*KMGNVT Trigger: AGTCACATTCCCCATCTTCCACAAGATTAAGATTTT...TGGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CCA 90 bp | TATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTCAAATATCTTTGCTTTaGGCCCGGAACATTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: YILLQLELVTPKMAPSQCQISLL*ARNILM Trigger: CATTAAAATGTTCCGGGCCCAAAGCAAAGATATTTG...ACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGAAAGATTCTACCTCCTaGCTGGACTTGGGCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MAPSQCSGSHVVCAFPTRKDSTS*LDLGSD Trigger: ATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTTT...CCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CCA 90 bp | CTCCGTAGTTCTGTCTCGCAAAAGATTCTACCTCCTTGCTGGACTTaGGCTCCGATTCTCCAAACTGATTGCACGGAAAAGCCAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSSVSQKILPPCWT*APILQTDCTEKPGR Trigger: ACGTCCTGGCTTTTCCGTGCAATCAGTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTTTTGCGAGACAGAACTACGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CAA 90 bp | TGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTCCAAAAATTCCACCTaGGCTCCTTCTTGGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WHPHSVPGPMWCVLFPQGSKNST*APSWKN Trigger: ATTCTTCCAAGAAGGAGCCAAGGTGGAATTTTTGGA...ACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCACTTGTCCCTCAGGGTaGACCAGATACTTCCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSQCSGSHVVCAFPTRLITCPSG*TRYFQK Trigger: TTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGT...GATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGGCACCCTCACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAGCAAATATCTTTGCTTaGGGCCCGGAACATTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KMAPSQCSGSHVVCAFPTANIFA*GPEHFN Trigger: ATTAAAATGTTCCGGGCCCAAAGCAAAGATATTTGC...TGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGTGAGGGTGCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGGTCCCAAAACTGCAAATATCTTaGCTTTGGGCCCGGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: TARVSYSKNGTLTVFRVPKLQIS*LWARNI Trigger: AATGTTCCGGGCCCAAAGCAAAGATATTTGCAGTTT...TGGGACCCGGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTTCCGGGTCCCATGTGGTGTGTGCTTTTCCCACAAGGTTAATCCTAGACACCTTGGCTCCTTCTaGGAAGAATCAACAATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TVFRVPCGVCFSHKVNPRHLGSF*EESTIN Trigger: ATTTATTGTTGATTCTTCCAAGAAGGAGCCAAGGTG...TCTAGGATTAACCTTGTGGGAAAAGCACACACCACATGGGACCCGGAACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CCA 90 bp | CGGTCCTTCCTTTGGCATCCTTTACTTCAAAGGAGTAGAAGCTGTTaGTTCTCGGCTTCAGGAATTTTAACTGAAGGAGAAAAAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSFLWHPLLQRSRSC*FSASGILTEGEKAS Trigger: TGATGCTTTTTCTCCTTCAGTTAAAATTCCTGAAGCCGAGAACCAACAGCTTCTACTCCTTTGAAGTAAAGGATGCCAAAGGAAGGACCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGACCTCCTTGCTGGACTaGGGCTCCGATTCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LYILLQLELVTPKMAPSQTSLLD*GSDSPN Trigger: GTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGGT...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTATTGGTGACTGAACATTCTAGATTTTTCCTTCTGGTCAATAGAAGTAATCCAGAACTTCACGACTaGTCCCTCAGGGTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVLVTEHSRFFLLVNRSNPELHD*SLRVDQ Trigger: CTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGG...ATTACTTCTATTGACCAGAAGGAAAAATCTAGAATGTTCAGTCACCAATACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCAGGGAAGCTTTGCCTTaGAACTTTTCCAGAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: RFFLLVNRSNILHHGLASREALP*NFSRDT Trigger: CGTGTCTCTGGAAAAGTTCAAAGGCAAAGCTTCCCT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS TCA 90 bp | TCCTCTTTCTTTTTAAGAATAATTTGCCCAATCATTTGTGATACATaGGGTCTGATGGCTTCAAGGGGTTCTTCTGGCCTCCAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSFFLRIICPIICDT*GLMASRGSSGLQNF Trigger: GAAGTTCTGGAGGCCAGAAGAACCCCTTGAAGCCATCAGACCTCATGTATCACAAATGATTGGGCAAATTATTCTTAAAAAGAAAGAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCACTTGTCCCTCAGGGTaGACCAGATACTTCCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFFLLVNRSNILHHGLASTCPSG*TRYFQK Trigger: TTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | AGATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCAAACTGCAAATATCTTaGCTTTGGGCCCGGAACATT | + |
|
Preference number: 5 (lower is better) Translates to: RFFLLVNRSNILHHGLASKLQIS*LWARNI Trigger: AATGTTCCGGGCCCAAAGCAAAGATATTTGCAGTTT...GGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | TATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTGACACGGTCCTTCCTTaGGCATCCTTTACTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YILLQLELVTPKMAPSQCDTVLP*ASFTSK Trigger: CTTTGAAGTAAAGGATGCCAAAGGAAGGACCGTGTC...ACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | GATTTTTCCTTCTGGTCAATAGAAGTAATATACTTCATCATGGGTTGGCCTCCATCCAAAAATTCCACCTaGGCTCCTTCTTGGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DFSFWSIEVIYFIMGWPPSKNST*APSWKN Trigger: ATTCTTCCAAGAAGGAGCCAAGGTGGAATTTTTGGA...TGGAGGCCAACCCATGATGAAGTATATTACTTCTATTGACCAGAAGGAAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGTGTTCCGGAAGAATTTTGCCTTaGAACTTTTCCAGAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: ILLQLELVTPKMAPSQCSGRILP*NFSRDT Trigger: CGTGTCTCTGGAAAAGTTCAAAGGCAAAATTCTTCC...GGAACACTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTATTGGTGACTGAACATTCTAGATTTTTCCTTCTGGTCAATAGAAGTAATGCAAATATCTTTGCTTaGGGCCCGGAACATTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVLVTEHSRFFLLVNRSNANIFA*GPEHFN Trigger: ATTAAAATGTTCCGGGCCCAAAGCAAAGATATTTGC...ATTACTTCTATTGACCAGAAGGAAAAATCTAGAATGTTCAGTCACCAATACCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||
| CDS-3UTR CAA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGCCTAAAATCTTAATCTaGTGGAAGATGGGGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYILLQLELVTPKMAPSQPKILI*WKMGNV Trigger: CACATTCCCCATCTTCCACAAGATTAAGATTTTAGG...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS-3UTR CAA 90 bp | TTGTATATTTTATTACAGCTAGAGTTAGTTACTCCAAAAATGGCACCCTCACAGCTTCTTGGAAGAATTTaGCCTTTGAACTTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYILLQLELVTPKMAPSQLLGRI*PLNFSR Trigger: TCTGGAAAAGTTCAAAGGCAAAATTCTTCCAAGAAG...CTGTGAGGGTGCCATTTTTGGAGTAACTAACTCTAGCTGTAATAAAATATACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231962.2 |
||
| CDS TCA 72 bp | CTGGCCTCCAGAACTTCACGACTTGTCCCTCAGGGTTaGCCAGATACTTCCAAAAATTCCACCTTGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LASRTSRLVPQG*PDTSKNSTLAP Trigger: AGGAGCCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGGAGGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 72 bp | TCTGGCCTCCAGAACTTCACGACTTGTCCCTCAGGGTaGACCAGATACTTCCAAAAATTCCACCTTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLQNFTTCPSG*TRYFQKFHLGS Trigger: GGAGCCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGGAGGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 90 bp | AGGGGTTCTTCTGGCCTCCAGAACTTCACGACTTGTCCCTCAGGGTaGACCAGATACTTCCAAAAATTCCACCTTGGCTCCTTCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGSSGLQNFTTCPSG*TRYFQKFHLGSFLE Trigger: TTCCAAGAAGGAGCCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGGAGGCCAGAAGAACCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 90 bp | TCTGATGGCTTCAAGGGGTTCTTCTGGCCTCCAGAACTTCACGACTaGTCCCTCAGGGTTGACCAGATACTTCCAAAAATTCCACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SDGFKGFFWPPELHD*SLRVDQILPKIPPW Trigger: CCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGGAGGCCAGAAGAACCCCTTGAAGCCATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS GCA 72 bp | CTCCGTAGTTCTGTCTCGCAAAAGATTCTACCTCCTTaGTGGACTTGGGCTCCGATTCTCCAAACTGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSSVSQKILPP*WTWAPILQTDC Trigger: GCAATCAGTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTTTTGCGAGACAGAACTACGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CCA 72 bp | CGTAGTTCTGTCTCGCAAAAGATTCTACCTCCTTGCTaGACTTGGGCTCCGATTCTCCAAACTGATTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSSVSQKILPPC*TWAPILQTDCT Trigger: CGTGCAATCAGTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTTTTGCGAGACAGAACTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CCA 72 bp | TCTGTCTCGCAAAAGATTCTACCTCCTTGCTGGACTTaGGCTCCGATTCTCCAAACTGATTGCACGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVSQKILPPCWT*APILQTDCTEK Trigger: CTTTTCCGTGCAATCAGTTTGGAGAATCGGAGCCCAAGTCCAGCAAGGAGGTAGAATCTTTTGCGAGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 72 bp | TCACTAGCCACGTTTACAACCAGGGAAGCTTTGCCTTaGAACTTTTCCAGAGACACGGTCCTTCCTTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLATFTTREALP*NFSRDTVLPLA Trigger: TGCCAAAGGAAGGACCGTGTCTCTGGAAAAGTTCAAAGGCAAAGCTTCCCTGGTTGTAAACGTGGCTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 72 bp | TTCAAGGGGTTCTTCTGGCCTCCAGAACTTCACGACTaGTCCCTCAGGGTTGACCAGATACTTCCAAAAATT | + |
|
Preference number: 6 (lower is better) Translates to: FKGFFWPPELHD*SLRVDQILPKI Trigger: AATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCGTGAAGTTCTGGAGGCCAGAAGAACCCCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CAA 90 bp | TCAGGGTTGACCAGATACTTCCAAAAATTCCACCTTGGCTCCTTCTaGGAAGAATCAACAATAAATCTAAACGCAGGTTCTGCTTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGLTRYFQKFHLGSF*EESTINLNAGSASG Trigger: GCCGGAAGCAGAACCTGCGTTTAGATTTATTGTTGATTCTTCCAAGAAGGAGCCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022282.6 |
||
| CDS CCA 72 bp | CTTTGGCATCCTTTACTTCAAAGGAGTAGAAGCTGTTaGTTCTCGGCTTCAGGAATTTTAACTGAAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LWHPLLQRSRSC*FSASGILTEGE Trigger: TTCTCCTTCAGTTAAAATTCCTGAAGCCGAGAACCAACAGCTTCTACTCCTTTGAAGTAAAGGATGCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022282.6 ENSMUST00000231962.2 |
||