Pregenerated sensors for GPX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004341Ensembl transcript IDs: ENSMUST00000004453.9
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGGGCTAAACAGAAGGAGAACTTGACAAAGCATGCCCAGCTTTaGAGGAGAAGAGGCTGGGACCCAGAGGATCTGGCCACCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: QRAKQKENLTKHAQL*RRRGWDPEDLATHP Trigger: GGGATGGGTGGCCAGATCCTCTGGGTCCCAGCCTCTTCTCCTCCAAAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTTTAGCCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 90 bp | CCTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATaGGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PECTNRKSLRKAGRI*ARGTLGSWWKCPVF Trigger: GAAGACAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CCA 90 bp | GGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGGGACCTTaGGATCCTGGTGGAAATGCCCTGTCTTCATGTGATGAGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: GSHSGRLVGYEPEGP*DPGGNALSSCDERF Trigger: AAACCTCTCATCACATGAAGACAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 90 bp | AAAGGTGGGAGAACTCTGGGTGAGAGCAAACCACATCATTTGGTGTaGAGGACATCTGTAGCCAAGTGCCATGACCTGAATGCACAAACA | + |
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Preference number: 1 (lower is better) Translates to: KGGRTLGESKPHHLV*RTSVAKCHDLNAQT Trigger: TGTTTGTGCATTCAGGTCATGGCACTTGGCTACAGATGTCCTTCACACCAAATGATGTGGTTTGCTCTCACCCAGAGTTCTCCCACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGTAGGATATGAGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGTGGAGGAGAAGAGGCTaGGACCCAGAGGATCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RLVGYEPEGPWDPGGNALWRRRG*DPEDLA Trigger: GGCCAGATCCTCTGGGTCCCAGCCTCTTCTCCTCCA...CAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGGGGACCCAGAGGATCTaGCCACCCATCCCCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: LNAQTGSHSGRLVGYEPEGTQRI*PPIPTS Trigger: AGAAGTGGGGATGGGTGGCCAGATCCTCTGGGTCCC...CTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGTAGGATATGAGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGTCTGTAGATTGCACATaGATTAGTAGGGACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLVGYEPEGPWDPGGNALSVDCT*ISRDTG Trigger: TCCTGTGTCCCTACTAATGCATGTGCAATCTACAGA...CAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGAACTACAGGGTGCTGTaGTACCAAAGGGCTAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: LNAQTGSHSGRLVGYEPENYRVL*YQRAKQ Trigger: CTGTTTAGCCCTTTGGTACCACAGCACCCTGTAGTT...CTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTGCTGTGGTGAACTTGACAAAGCATaGCCAGCTTTGGAGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GFCSQPSKFPKKTTGCCGELDKA*PALEEK Trigger: CTTCTCCTCCAAAGCTGGGCATGCTTTGTCAAGTTC...ACCACAGCACCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTGCTGTGGTAACAGAAGGAGAACTTaGCAAAGCATGCCCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GFCSQPSKFPKKTTGCCGNRRRT*QSMPSF Trigger: AAAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTT...ACCACAGCACCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CCA 72 bp | AAACAGAAGGAGAACTTGACAAAGCATGCCCAGCTTTaGAGGAGAAGAGGCTGGGACCCAGAGGATCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: KQKENLTKHAQL*RRRGWDPEDLA Trigger: GGCCAGATCCTCTGGGTCCCAGCCTCTTCTCCTCCAAAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 72 bp | ACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATaGGCCAGAGGGACCTTGGGATCCTGGTGGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: TNRKSLRKAGRI*ARGTLGSWWKC Trigger: GCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CCA 72 bp | ATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTaGGCTTTGGTCATATGGAGGCTGGTGACCGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: IAHALVGTQEVL*ALVIWRLVTEW Trigger: CCACTCGGTCACCAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CCA 72 bp | TCAGGAAGGCTGGTAGGATATGAGCCAGAGGGACCTTaGGATCCTGGTGGAAATGCCCTGTCTTCATGTGAT | + |
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Preference number: 3 (lower is better) Translates to: SGRLVGYEPEGP*DPGGNALSSCD Trigger: ATCACATGAAGACAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 72 bp | TGCTGTGGTACCAAAGGGCTAAACAGAAGGAGAACTTaGCAAAGCATGCCCAGCTTTGGAGGAGAAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: CCGTKGLNRRRT*QSMPSFGGEEA Trigger: AGCCTCTTCTCCTCCAAAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTTTAGCCCTTTGGTACCACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CCA 72 bp | GTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATaGAGGCTGGTGACCGAGTGGAACAAAGACAAAATT | + |
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Preference number: 3 (lower is better) Translates to: VGTQEVLWALVI*RLVTEWNKDKI Trigger: AATTTTGTCTTTGTTCCACTCGGTCACCAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 72 bp | AGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGGTaGCCGAGTGGAACAAAGACAAAATTTGTAAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: RKCCGLWSYGGW*PSGTKTKFVKP Trigger: AGGCTTTACAAATTTTGTCTTTGTTCCACTCGGTCACCAGCCTCCATATGACCAAAGCCCACAGCACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR TCA 72 bp | AGAACTCTGGGTGAGAGCAAACCACATCATTTGGTGTaGAGGACATCTGTAGCCAAGTGCCATGACCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: RTLGESKPHHLV*RTSVAKCHDLN Trigger: ATTCAGGTCATGGCACTTGGCTACAGATGTCCTTCACACCAAATGATGTGGTTTGCTCTCACCCAGAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTGCTGTGGTAAACAGAAGGAGAACTaGACAAAGCATGCCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GFCSQPSKFPKKTTGCCGKQKEN*TKHAQL Trigger: AAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTTT...ACCACAGCACCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR GCA 72 bp | TCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTaGTGTGGTACCAAAGGGCTAAACAGAAGGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: SQPSKFPKKTTG*CGTKGLNRRRT Trigger: AGTTCTCCTTCTGTTTAGCCCTTTGGTACCACAGCACCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR GCA 72 bp | GTGGAAATGCCCTGTCTTCATGTGATGAGAGGTTTCTaGTCTCAGCCTTCAAAATTCCCTAAGAAAACTACA | + |
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Preference number: 3 (lower is better) Translates to: VEMPCLHVMRGF*SQPSKFPKKTT Trigger: TGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCACATGAAGACAGGGCATTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR GCA 90 bp | AGGCTGGTAGGATATGAGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGGAGGATGTGCTTTCCTaGATACTGCTGGAAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLVGYEPEGPWDPGGNALEDVLS*ILLEVD Trigger: GTCAACTTCCAGCAGTATGCAGGAAAGCACATCCTC...CAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR GCA 90 bp | CTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGGGCTTCAGCTCCTCCTaGAATGTGTTCAGCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNAQTGSHSGRLVGYEPEGFSSS*NVFSSG Trigger: CCCTGAGCTGAACACATTGCAGGAGGAGCTGAAGCC...CTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTAGGATATGAGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGCAAAAAGTTCAGAGGTaGGAGGGCAGGAGTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: RLVGYEPEGPWDPGGNALQKVQR*EGRSSL Trigger: TAAAGAACTCCTGCCCTCCCACCTCTGAACTTTTTG...CAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | CTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGCTGACAGGAGTATGGTaGAACCAGCGCATGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: LNAQTGSHSGRLVGYEPELTGVW*NQRMTG Trigger: CCCTGTCATGCGCTGGTTCCACCATACTCCTGTCAG...CTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR TCA 90 bp | GAAATGCCCTGTCTTCATGTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCGGTGGAACCAGCGCATaGCAGGGACTCCATCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: EMPCLHVMRGFCSQPSKFGGTSA*QGLHQV Trigger: GACCTGATGGAGTCCCTGTCATGCGCTGGTTCCACC...GAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCACATGAAGACAGGGCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CAA 72 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTaGGTCATATGGAGGCTGGTGACCGAGTGGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: HALVGTQEVLWA*VIWRLVTEWNK Trigger: TTTGTTCCACTCGGTCACCAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| 3UTR CAA 72 bp | GTGCTGTGGTACCAAAGGGCTAAACAGAAGGAGAACTaGACAAAGCATGCCCAGCTTTGGAGGAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLWYQRAKQKEN*TKHAQLWRRRG Trigger: GCCTCTTCTCCTCCAAAGCTGGGCATGCTTTGTCAAGTTCTCCTTCTGTTTAGCCCTTTGGTACCACAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR TCA 90 bp | CTGAATGCACAAACAGGAAGTCACTCAGGAAGGCTGGTAGGATATGAGCCAGAGGGCAGCCATAAACAATaGGAAAAGACAGGAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: LNAQTGSHSGRLVGYEPEGSHKQ*EKTGTP Trigger: TGGGGTTCCTGTCTTTTCTCATTGTTTATGGCTGCC...CTCTGGCTCATATCCTACCAGCCTTCCTGAGTGACTTCCTGTTTGTGCATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR GCA 90 bp | GATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGCATACTCATAGACGGTaGCAGTCACCCCTTTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: DCTCISRDTGSAVGFGHMHTHRR*QSPLCC Trigger: GCAACAAAGGGGTGACTGGCACCGTCTATGAGTATG...CATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR GCA 90 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGTTGACAAAGAGGATGTaGTTTCCTGCATACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HALVGTQEVLWALVIWRLLTKRM*FPAYCW Trigger: CCAGCAGTATGCAGGAAAGCACATCCTCTTTGTCAA...CAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | GATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGCACCATCTATGGTGTTaGCTCCATACTCATAGACGG | + |
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Preference number: 4 (lower is better) Translates to: DCTCISRDTGSAVGFGHMHHLWC*LHTHRR Trigger: CCGTCTATGAGTATGGAGCCAACACCATAGATGGTG...CATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGCCAGAAGAGATGTTCTaGAGAGCCAAAAAGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HALVGTQEVLWALVIWRLPEEMF*RAKKFR Trigger: TCTGAACTTTTTGGCTCTCCAGAACATCTCTTCTGG...CAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGTCCATGATGTCTGACTaGACAATTCTGACAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: HALVGTQEVLWALVIWRLSMMSD*TILTGV Trigger: TACTCCTGTCAGAATTGTCCAGTCAGACATCATGGA...CAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR TCA 90 bp | GTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGCTGGACGCACATACTTaGGTCCAAGGAGAATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VMRGFCSQPSKFPKKTTGLDAHT*VQGESL Trigger: CAGAGATTCTCCTTGGACTCAAGTATGTGCGTCCAG...CCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | GTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGAACCGTGACGTTGAATaGCTTCAGCTCCTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VMRGFCSQPSKFPKKTTGNRDVE*LQLLLQ Trigger: TTGCAGGAGGAGCTGAAGCCATTCAACGTCACGGTT...CCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR TCA 90 bp | GTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGAGAAGGATGCCACGTTaGCAAAGAGGATGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VMRGFCSQPSKFPKKTTGRRMPR*QRGCAF Trigger: GAAAGCACATCCTCTTTGTCAACGTGGCATCCTTCT...CCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | ATTAGGATCTCTGTAGATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTGTCCAAACTGGTTGCATaGAAAGCCCAAAACCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: IRISVDCTCISRDTGSAVSKLVA*KAQNRD Trigger: GTCACGGTTTTGGGCTTTCCATGCAACCAGTTTGGA...CACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAATCTACAGAGATCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR GCA 90 bp | GAAATGCCCTGTCTTCATGTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCTGCTTTCCTGCATACTaGTGGAAGTTGACAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: EMPCLHVMRGFCSQPSKFCFPAY*WKLTNS Trigger: GGAGTTTGTCAACTTCCAGCAGTATGCAGGAAAGCA...GAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCACATGAAGACAGGGCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CCA 90 bp | GTGATGAGAGGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTCTTGCTTTCCAAACTaGTTGCATGGAAAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: VMRGFCSQPSKFPKKTTGSCFPN*LHGKPK Trigger: TTTGGGCTTTCCATGCAACCAGTTTGGAAAGCAAGA...CCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACCTCTCATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | AGGCTGGTAGGATATGAGCCAGAGGGACCTTGGGATCCTGGTGGAAATGCCCTGGTGCCAGTCACCCCTTaGTTGCAATCCACCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: RLVGYEPEGPWDPGGNALVPVTP*LQSTFD Trigger: ATCGAAGGTGGATTGCAACAAAGGGGTGACTGGCAC...CAGGGCATTTCCACCAGGATCCCAAGGTCCCTCTGGCTCATATCCTACCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGCAGAAGGATGCCACGTaGACAAAGAGGATGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HALVGTQEVLWALVIWRLQKDAT*TKRMCF Trigger: AAAGCACATCCTCTTTGTCAACGTGGCATCCTTCTG...CAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS GCA 90 bp | TGGTGTTGGCTCCATACTCATAGACGGTGCCAGTCACCCCTTTGTTaGAATCCACCTTCGATTTTTGAGGATTCAGAGTCTCCTGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: WCWLHTHRRCQSPLC*NPPSIFEDSESPEL Trigger: TAGCTCAGGAGACTCTGAATCCTCAAAAATCGAAGGTGGATTGCAACAAAGGGGTGACTGGCACCGTCTATGAGTATGGAGCCAACACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | GATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGCATACTGCTGGAAGTaGACAAACTCCCCACCATCT | + |
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Preference number: 5 (lower is better) Translates to: DCTCISRDTGSAVGFGHMAYCWK*TNSPPS Trigger: AGATGGTGGGGAGTTTGTCAACTTCCAGCAGTATGC...CATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | CATGCATTAGTAGGGACACAGGAAGTGCTGTGGGCTTTGGTCATATGGAGGCTGAAAACCTTTTGTTCATaGTCTCCGTTCACATCCCCC | + |
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Preference number: 5 (lower is better) Translates to: HALVGTQEVLWALVIWRLKTFCS*SPFTSP Trigger: GGGGGATGTGAACGGAGACAATGAACAAAAGGTTTT...CAGCCTCCATATGACCAAAGCCCACAGCACTTCCTGTGTCCCTACTAATGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | GGTTTCTGCTCTCAGCCTTCAAAATTCCCTAAGAAAACTACAGGGTGCTGTGGTATCCACCTTCGATTTTaGAGGATTCAGAGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GFCSQPSKFPKKTTGCCGIHLRF*RIQSLL Trigger: CAGGAGACTCTGAATCCTCAAAAATCGAAGGTGGAT...ACCACAGCACCCTGTAGTTTTCTTAGGGAATTTTGAAGGCTGAGAGCAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS-3UTR CAA 90 bp | ATTAGGATCTCTGTAGATTGCACATGCATTAGTAGGGACACAGGAAGTGCTGTGCCAGTCACCCCTTTGTaGCAATCCACCTTCGATTTT | + |
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Preference number: 5 (lower is better) Translates to: IRISVDCTCISRDTGSAVPVTPL*QSTFDF Trigger: AAAATCGAAGGTGGATTGCAACAAAGGGGTGACTGG...CACAGCACTTCCTGTGTCCCTACTAATGCATGTGCAATCTACAGAGATCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS GCA 72 bp | CACCATCTATGGTGTTGGCTCCATACTCATAGACGGTaGCAGTCACCCCTTTGTTGCAATCCACCTTCGATT | + |
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Preference number: 6 (lower is better) Translates to: HHLWCWLHTHRR*QSPLCCNPPSI Trigger: AATCGAAGGTGGATTGCAACAAAGGGGTGACTGGCACCGTCTATGAGTATGGAGCCAACACCATAGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS TCA 72 bp | CAAAGAGGATGTGCTTTCCTGCATACTGCTGGAAGTTaGCAAACTCCCCACCATCTATGGTGTTGGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QRGCAFLHTAGS*QTPHHLWCWLH Trigger: ATGGAGCCAACACCATAGATGGTGGGGAGTTTGTCAACTTCCAGCAGTATGCAGGAAAGCACATCCTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS CCA 72 bp | GTACTGGTTTGGTTTAGGTACTCCATGATGTCTGACTaGACAATTCTGACAGGAGTATGGTGGAACCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: VLVWFRYSMMSD*TILTGVWWNQR Trigger: GCGCTGGTTCCACCATACTCCTGTCAGAATTGTCCAGTCAGACATCATGGAGTACCTAAACCAAACCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS CAA 72 bp | ACAAAGAGGATGTGCTTTCCTGCATACTGCTGGAAGTaGACAAACTCCCCACCATCTATGGTGTTGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TKRMCFPAYCWK*TNSPPSMVLAP Trigger: TGGAGCCAACACCATAGATGGTGGGGAGTTTGTCAACTTCCAGCAGTATGCAGGAAAGCACATCCTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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| CDS GCA 72 bp | CTCCATACTCATAGACGGTGCCAGTCACCCCTTTGTTaGAATCCACCTTCGATTTTTGAGGATTCAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LHTHRRCQSPLC*NPPSIFEDSES Trigger: AGACTCTGAATCCTCAAAAATCGAAGGTGGATTGCAACAAAGGGGTGACTGGCACCGTCTATGAGTATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004453.9 |
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