Pregenerated sensors for GPX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075706Ensembl transcript IDs: ENSMUST00000097227.11, ENSMUST00000105372.9, ENSMUST00000183037.3
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTaGCCCACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: LWTFLRQGCTPGPQD*PTSRLVFRQTFMSA Trigger: GGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| 3UTR GCA 72 bp | AGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATaGACGCCAGGTCCTCAGGACTGCCCCACCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RATGLWTFLRQG*TPGPQDCPTSR Trigger: CCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| 3UTR GCA 72 bp | TTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTaGCCCACCAGCAGGCTGGTTTTCAGGCAGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLRQGCTPGPQD*PTSRLVFRQTF Trigger: GAAGGTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| 3UTR TCA 72 bp | ACATTTCTACATTTTATTCCCACAAGGCAGCCAGGGTaGAGCTCGAGCCCAGGGCCACAGGCCTCTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: TFLHFIPTRQPG*SSSPGPQASGP Trigger: AGGTCCAGAGGCCTGTGGCCCTGGGCTCGAGCTTCACCCTGGCTGCCTTGTGGGAATAAAATGTAGAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCGCGGGATGCACACATaGTGCCTGCCAGACCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDLPPAGMHARSSGLPHQRGMHT*CLPDQA Trigger: CGCCTGGTCTGGCAGGCACCATGTGTGCATCCCGCG...CTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACGCGAGGCCACGTTGGTaGCGATGCACACGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLDLPPAGMHARSSGLPHARPRW*RCTRNP Trigger: GGGGTTTCGTGTGCATCGTCACCAACGTGGCCTCGC...GTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCGCGAGGCCACGTTGGTaGCGATGCACACGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLWTFLRQGCTPGPQDCARPRW*RCTRNP Trigger: GGGGTTTCGTGTGCATCGTCACCAACGTGGCCTCGC...GCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAGCTCGAGCCCAGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCTGGCATTTCCCAGCATaGCCCTGCCCTTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKLEPRATGLWTFLRQGCWHFPA*PCPWAG Trigger: TCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCA...GCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCTGGGCTCGAGCTTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCGGGATGCACACATGGTaGCTGCCAGACCAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLWTFLRQGCTPGPQDCGMHTW*LPDQAQ Trigger: CTGCGCCTGGTCTGGCAGGCACCATGTGTGCATCCC...GCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCTGGGGCTCCTCCATaGGACCATAGCGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGPSSGRDARQVLRTAPPGAPP*DHSASP Trigger: TGGTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGG...TGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | TCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTGCAGAGGCCCCGGGTTaGAAGGTTCAGGAATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRDARQVLRTAPPAGWFAEAPG*KVQEWA Trigger: AGCCCATTCCTGAACCTTTCAACCCGGGGCCTCTGC...AAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR TCA 90 bp | GGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCGTCGATGTCCTTGGCTaGGAATTCGTGCATGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLWTFLRQGCTPGPQDCPVDVLG*EFVHGA Trigger: CGCTCCATGCACGAATTCTCAGCCAAGGACATCGAC...GGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACTCCAGGCAGACCATGTaGCCGTCGATGTCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLDLPPAGMHARSSGLPHSRQTM*PSMSLA Trigger: AGCCAAGGACATCGACGGGCACATGGTCTGCCTGGA...GTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | GACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGTTCCCAGCATGCCCCTaGCCTTGGGCTGGACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPPAGMHARSSGLPHQQFPACP*PWAGLS Trigger: TGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAA...CTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | CGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCTGGCATTTCCCAGCATaGCCCTGCCCTTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGCTPGPQDCPTSRLVFWHFPA*PCPWAG Trigger: TCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCA...GAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | TGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACCTGCACACATGGTGCCTaGCAGACCAGGCGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTPGPQDCPTSRLVFRQTCTHGA*QTRRSQ Trigger: CTGGCTGCGCCTGGTCTGGCAGGCACCATGTGTGCA...GGTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGCCCCTGCCCTTGGGCTaGACTTTCATCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGRDARQVLRTAPPAGWPLPLG*TFIHFH Trigger: GTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGG...CCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTCCTTCTCTATCACCTaGGGCTCCTCCATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGRDARQVLRTAPPAGWSFSIT*GSSMGP Trigger: TGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGA...CCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACGTCGATGTCCTTGGCTaGGAATTCGTGCATGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLDLPPAGMHARSSGLPHVDVLG*EFVHGA Trigger: CGCTCCATGCACGAATTCTCAGCCAAGGACATCGAC...GTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCTTGGCTGAGAATTCGTaGATGGAGCGCGCACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGCTPGPQDCPTSRLVFLAENS*MERAQR Trigger: GCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAA...GAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCATTGGCTGAGAATTCGTaGATGGAGCGCGCACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPSSGRDARQVLRTAPPLAENS*MERAQR Trigger: GCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAA...TGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR GCA 90 bp | CGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCTTCCCAGCATGCCCCTaGCCTTGGGCTGGACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGCTPGPQDCPTSRLVFFPACP*PWAGLS Trigger: TGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAA...GAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGAGCTGTTGCAGTACTaGGGAGGCTCTTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RATGLWTFLRQGCTPGPQELLQY*GGSCSR Trigger: TCTGCTGCAAGAGCCTCCCCAGTACTGCAACAGCTC...CTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR CCA 90 bp | TCCCACAAGGCAGCCAGGGTGAAGCTCGAGCCCAGGGCCACAGGCCTCTGGACCCTGAGAATTCGTGCATaGAGCGCGCACAGCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHKAARVKLEPRATGLWTLRIRA*SAHSAN Trigger: ATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAG...GGTCCAGAGGCCTGTGGCCCTGGGCTCGAGCTTCACCCTGGCTGCCTTGTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCATCCTGCCTCCCAAACTaGTTGCAGGGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDARQVLRTAPPAGWFSSCLPN*LQGKAR Trigger: CCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCAGGA...TGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | GACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGTCCTTCTCTATCACCTaGGGCTCCTCCATGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPPAGMHARSSGLPHQQSFSIT*GSSMGP Trigger: TGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGA...CTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | CTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTACTTCCTGGCTCCTaGCTCCCAAACTGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRQGCTPGPQDCPTSRLVLLPGS*LPNWLQ Trigger: CTGCAACCAGTTTGGGAGGCAGGAGCCAGGAAGTAA...AACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | GACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGTTACTTCCTGGCTCCTaGCTCCCAAACTGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPPAGMHARSSGLPHQQLLPGS*LPNWLQ Trigger: CTGCAACCAGTTTGGGAGGCAGGAGCCAGGAAGTAA...CTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | ATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACTGGCATTTCCCAGCATaGCCCTGCCCTTGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MHARSSGLPHQQAGFQADWHFPA*PCPWAG Trigger: TCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCA...GTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCTGAGAATTCGTGCATaGAGCGCGCACAGCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLWTFLRQGCTPGPQDCLRIRA*SAHSAN Trigger: ATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAG...GCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCATGCCCCTGCCCTTaGGCTGGACTTTCATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSSGRDARQVLRTAPPACPCP*AGLSSI Trigger: AATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGC...TGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGCCTGGGGCTCCTCCATaGGACCATAGCGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGFQADLHECRGGRLQGPGAPP*DHSASP Trigger: TGGTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGG...CCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | ATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACTCCAGGCAGACCATGTaGCCGTCGATGTCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHARSSGLPHQQAGFQADSRQTM*PSMSLA Trigger: AGCCAAGGACATCGACGGGCACATGGTCTGCCTGGA...GTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGGCCTCCCAAACTGGTTaGAGGGGAAGGCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGFQADLHECRGGRLQGASQTG*RGRPGF Trigger: GAATCCTGGCCTTCCCCTGCAACCAGTTTGGGAGGC...CCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTCACAGGGCTTCCCAGCATGCCCCTaGCCTTGGGCTGGACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQADLHECRGGRLQGSQGFPACP*PWAGLS Trigger: TGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAA...GCCCTGTGACCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | CACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCTCCTGCCTCCCAAACTaGTTGCAGGGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQQAGFQADLHECRGGRLSCLPN*LQGKAR Trigger: CCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCAGGA...GAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCTCCTGCCTCCCAAACTaGTTGCAGGGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRLVFRQTFMSAGVEGSSCLPN*LQGKAR Trigger: CCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCAGGA...GGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTCTTGATTACTTCCTaGCTCCTGCCTCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGRDARQVLRTAPPAGWFLITS*LLPPKL Trigger: CAGTTTGGGAGGCAGGAGCCAGGAAGTAATCAAGAA...CCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | GGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGGCATGCCCCTGCCCTTaGGCTGGACTTTCATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GCTPGPQDCPTSRLVFRQACPCP*AGLSSI Trigger: AATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGC...CTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | CACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCCTGGGGCTCCTCCATaGGACCATAGCGCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HQQAGFQADLHECRGGRLPGAPP*DHSASP Trigger: TGGTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGG...GAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | GGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCCGGCTGCAAACTCCTTaGTTTCTTGATTACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLWTFLRQGCTPGPQDCPRLQTP*FLDYFL Trigger: CAGGAAGTAATCAAGAAATCAAGGAGTTTGCAGCCG...GGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGAGTTTACGTCAGTTTTaGCTCATTGCGAGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RATGLWTFLRQGCTPGPQSLRQF*LIARPR Trigger: ACGTGGCCTCGCAATGAGGCAAAACTGACGTAAACT...CTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACAGTTTACGTCAGTTTTaGCTCATTGCGAGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PLDLPPAGMHARSSGLPHSLRQF*LIARPR Trigger: ACGTGGCCTCGCAATGAGGCAAAACTGACGTAAACT...GTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | CACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCGCCTCCCAAACTGGTTaGAGGGGAAGGCCAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HQQAGFQADLHECRGGRLASQTG*RGRPGF Trigger: GAATCCTGGCCTTCCCCTGCAACCAGTTTGGGAGGC...GAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACGTTGTAGCCGGCTaGAAACTCCTTGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RATGLWTFLRQGCTPGPQDVVAG*KLLDFL Trigger: CAAGAAATCAAGGAGTTTGCAGCCGGCTACAACGTC...CTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTCACAGGGCGCCCGTCGATGTCCTTaGCTGAGAATTCGTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FQADLHECRGGRLQGSQGARRCP*LRIRAW Trigger: CCATGCACGAATTCTCAGCCAAGGACATCGACGGGC...GCCCTGTGACCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGGCCCGTCGATGTCCTTaGCTGAGAATTCGTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAGFQADLHECRGGRLQGARRCP*LRIRAW Trigger: CCATGCACGAATTCTCAGCCAAGGACATCGACGGGC...CCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACTTCTTGATTACTTCCTaGCTCCTGCCTCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLDLPPAGMHARSSGLPHFLITS*LLPPKL Trigger: CAGTTTGGGAGGCAGGAGCCAGGAAGTAATCAAGAA...GTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGTTCTTGATTACTTCCTaGCTCCTGCCTCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLPPAGMHARSSGLPHQFLITS*LLPPKL Trigger: CAGTTTGGGAGGCAGGAGCCAGGAAGTAATCAAGAA...CTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | ATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACCCCCTGCCCTTGGGCTaGACTTTCATCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MHARSSGLPHQQAGFQADPLPLG*TFIHFH Trigger: GTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGG...GTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTCACAGGGCGCATGCCCCTGCCCTTaGGCTGGACTTTCATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FQADLHECRGGRLQGSQGACPCP*AGLSSI Trigger: AATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGC...GCCCTGTGACCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | TCTACATTTTATTCCCACAAGGCAGCCAGGGTGAAGCTCGAGCCCAGGGCCACATACTGGGGAGGCTCTTaGAGCAGAGGCCCCGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: STFYSHKAARVKLEPRATYWGGS*SRGPGL Trigger: CAACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTA...TGTGGCCCTGGGCTCGAGCTTCACCCTGGCTGCCTTGTGGGAATAAAATGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR GCA 90 bp | TCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAAGTTTACGTCAGTTTTaGCTCATTGCGAGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSSGRDARQVLRTAPPSLRQF*LIARPR Trigger: ACGTGGCCTCGCAATGAGGCAAAACTGACGTAAACT...TGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCCCCCTGCCCTTGGGCTaGACTTTCATCCATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSRLVFRQTFMSAGVEGSPLPLG*TFIHFH Trigger: GTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGG...GGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | ACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCTTACTTCCTGGCTCCTaGCTCCCAAACTGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSRLVFRQTFMSAGVEGSLLPGS*LPNWLQ Trigger: CTGCAACCAGTTTGGGAGGCAGGAGCCAGGAAGTAA...GGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGACGTTGTAGCCGGCTaGAAACTCCTTGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRDARQVLRTAPPAGWFSDVVAG*KLLDFL Trigger: CAAGAAATCAAGGAGTTTGCAGCCGGCTACAACGTC...TGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | GCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGCGGCTGCAAACTCCTTaGTTTCTTGATTACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGMHARSSGLPHQQAGFQRLQTP*FLDYFL Trigger: CAGGAAGTAATCAAGAAATCAAGGAGTTTGCAGCCG...CTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGACGTTGTAGCCGGCTaGAAACTCCTTGATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLVFRQTFMSAGVEGSRDVVAG*KLLDFL Trigger: CAAGAAATCAAGGAGTTTGCAGCCGGCTACAACGTC...CCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCCGGCTGCAAACTCCTTaGTTTCTTGATTACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSRLVFRQTFMSAGVEGSRLQTP*FLDYFL Trigger: CAGGAAGTAATCAAGAAATCAAGGAGTTTGCAGCCG...GGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | GACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGTACTGGGGAGGCTCTaGCAGCAGAGGCCCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLPPAGMHARSSGLPHQQVLGRL*QQRPRV Trigger: AACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTAC...CTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR CAA 90 bp | GGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCTGCCTCCCAAACTGGTaGCAGGGGAAGGCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GLWTFLRQGCTPGPQDCPCLPNW*QGKARI Trigger: AATCCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCA...GGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | CTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTAGGAACTCGGAGCTGTaGCAGTACTGGGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRQGCTPGPQDCPTSRLVRNSEL*QYWGGS Trigger: AGAGCCTCCCCAGTACTGCAACAGCTCCGAGTTCCT...AACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR CAA 90 bp | GGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCTGCCCGTCGATGTCCTaGGCTGAGAATTCGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLWTFLRQGCTPGPQDCPCPSMS*AENSCM Trigger: CATGCACGAATTCTCAGCCAAGGACATCGACGGGCA...GGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACAGGCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGCATTGCGAGGCCACGTaGGTGACGATGCACACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RATGLWTFLRQGCTPGPQHCEAT*VTMHTK Trigger: TTTCGTGTGCATCGTCACCAACGTGGCCTCGCAATG...CTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGCCTGTGGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | ATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACAGCAGAGGCCCCGGGTaGAAAGGTTCAGGAATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MHARSSGLPHQQAGFQADSRGPG*KGSGMG Trigger: GCCCATTCCTGAACCTTTCAACCCGGGGCCTCTGCT...GTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS-3UTR CAA 90 bp | CGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCGTCAGTTTTGCCTCATaGCGAGGCCACGTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RQGCTPGPQDCPTSRLVFVSFAS*RGHVGD Trigger: GTCACCAACGTGGCCTCGCAATGAGGCAAAACTGAC...GAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CCA 90 bp | TCGCGGGATGCACACAAGCCCAGGAACTCGGAGCTGTTGCAGTACTaGGGAGGCTCTTGCAGCAGAGGCCCCGGGTTGAAAGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRDAHKPRNSELLQY*GGSCSRGPGLKGSG Trigger: TCCTGAACCTTTCAACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTACTGCAACAGCTCCGAGTTCCTGGGCTTGTGTGCATCCCGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS CCA 90 bp | GGCAGACCATGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTGCATaGAGCGCGCACAGCGCCAATCATCGCGGGATGCACACAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPCARRCPWLRIRA*SAHSANHRGMHTSP Trigger: TGGGCTTGTGTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS CCA 90 bp | GGCAGACCATGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTGCATaGAGCGCGCACAGCGCCAATCATCGCGGGATGCACACATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRPCARRCPWLRIRA*SAHSANHRGMHTWC Trigger: GCACCATGTGTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTGCCTCCCAAACTGGTaGCAGGGGAAGGCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: QAGFQADLHECRGGRLQGCLPNW*QGKARI Trigger: AATCCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCA...CCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTCACAGGGCTGCCTCCCAAACTGGTaGCAGGGGAAGGCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FQADLHECRGGRLQGSQGCLPNW*QGKARI Trigger: AATCCTGGCCTTCCCCTGCAACCAGTTTGGGAGGCA...GCCCTGTGACCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS GCA 90 bp | TCCAGGCAGACCATGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTaGATGGAGCGCGCACAGCGCCAATCATCGCGGGATGCACACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRQTMCPSMSLAENS*MERAQRQSSRDAHK Trigger: CTTGTGTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS GCA 90 bp | TCCAGGCAGACCATGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTaGATGGAGCGCGCACAGCGCCAATCATCGCGGGATGCACACATG | + |
|
Preference number: 5 (lower is better) Translates to: SRQTMCPSMSLAENS*MERAQRQSSRDAHM Trigger: CATGTGTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS-3UTR CAA 90 bp | CACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCGTCAGTTTTGCCTCATaGCGAGGCCACGTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HQQAGFQADLHECRGGRLVSFAS*RGHVGD Trigger: GTCACCAACGTGGCCTCGCAATGAGGCAAAACTGAC...GAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTGGTAAAGTTCCATTaGATGGCATTTCCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSGRDARQVLRTAPPAGWLVKFH*MAFPSM Trigger: CATGCTGGGAAATGCCATCAAATGGAACTTTACCAA...CCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | GACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGTTGGTAAAGTTCCATTaGATGGCATTTCCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DLPPAGMHARSSGLPHQQLVKFH*MAFPSM Trigger: CATGCTGGGAAATGCCATCAAATGGAACTTTACCAA...CTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS GCA 90 bp | GTGACGATGCACACGAAACCCCTGTACTTATCCAGGCAGACCATGTaGCCGTCGATGTCCTTGGCTGAGAATTCGTGCATGGAGCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VTMHTKPLYLSRQTM*PSMSLAENSCMERA Trigger: TGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCCTGGATAAGTACAGGGGTTTCGTGTGCATCGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGGACCTTCCTCCGGCAGGGATGCACGCCAGGTCCTCAGGACTGCCCCACCATTTACACAGATCTaGCTGTACATGTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGPSSGRDARQVLRTAPPFTQI*LYMSNL Trigger: CAAGTTTGACATGTACAGCAAGATCTGTGTAAATGG...TGGGGCAGTCCTGAGGACCTGGCGTGCATCCCTGCCGGAGGAAGGTCCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | TCTACATTTTATTCCCACAAGGCAGCCAGGGTGAAGCTCGAGCCCAGGGCCACAGTCAGTTTTGCCTCATaGCGAGGCCACGTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: STFYSHKAARVKLEPRATVSFAS*RGHVGD Trigger: GTCACCAACGTGGCCTCGCAATGAGGCAAAACTGAC...TGTGGCCCTGGGCTCGAGCTTCACCCTGGCTGCCTTGTGGGAATAAAATGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS CCA 90 bp | CAGCATGCCCCTGCCCTTGGGCTGGACTTTCATCCATTTCCACAGTaGGTGGGCATCGTCCCCATTTACACAGATCTTGCTGTACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHAPALGLDFHPFPQ*VGIVPIYTDLAVHV Trigger: GACATGTACAGCAAGATCTGTGTAAATGGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CCA 90 bp | AAGTTCCATTTGATGGCATTTCCCAGCATGCCCCTGCCCTTGGGCTaGACTTTCATCCATTTCCACAGTGGGTGGGCATCGTCCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: KFHLMAFPSMPLPLG*TFIHFHSGWASSPF Trigger: AAATGGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCATCAAATGGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCCAGGGGTCACAGGGCCCATTTACACAGATCTaGCTGTACATGTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQADLHECRGGRLQGSQGPFTQI*LYMSNL Trigger: CAAGTTTGACATGTACAGCAAGATCTGTGTAAATGG...GCCCTGTGACCCCTGGAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | ATGCACGCCAGGTCCTCAGGACTGCCCCACCAGCAGGCTGGTTTTCAGGCAGACCCATTTACACAGATCTaGCTGTACATGTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: MHARSSGLPHQQAGFQADPFTQI*LYMSNL Trigger: CAAGTTTGACATGTACAGCAAGATCTGTGTAAATGG...GTCTGCCTGAAAACCAGCCTGCTGGTGGGGCAGTCCTGAGGACCTGGCGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS-3UTR CAA 90 bp | CACCAGCAGGCTGGTTTTCAGGCAGACCTTCATGAGTGCCGGGGTGGAAGGCTCTTGGTAAAGTTCCATTaGATGGCATTTCCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HQQAGFQADLHECRGGRLLVKFH*MAFPSM Trigger: CATGCTGGGAAATGCCATCAAATGGAACTTTACCAA...GAGCCTTCCACCCCGGCACTCATGAAGGTCTGCCTGAAAACCAGCCTGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CCA 90 bp | ATGCCCCTGCCCTTGGGCTGGACTTTCATCCATTTCCACAGTGGGTaGGCATCGTCCCCATTTACACAGATCTTGCTGTACATGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MPLPLGWTFIHFHSG*ASSPFTQILLYMSN Trigger: GTTTGACATGTACAGCAAGATCTGTGTAAATGGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS TCA 90 bp | GAGTGTAGTTTACGTCAGTTTTGCCTCATTGCGAGGCCACGTTGGTaGCGATGCACACGAAACCCCTGTACTTATCCAGGCAGACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: ECSLRQFCLIARPRW*RCTRNPCTYPGRPC Trigger: ACATGGTCTGCCTGGATAAGTACAGGGGTTTCGTGTGCATCGTCACCAACGTGGCCTCGCAATGAGGCAAAACTGACGTAAACTACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS GCA 90 bp | TACACAGATCTTGCTGTACATGTCAAACTTGACGTTGTAGCCGGCTaGAAACTCCTTGATTTCTTGATTACTTCCTGGCTCCTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YTDLAVHVKLDVVAG*KLLDFLITSWLLPP Trigger: GGGAGGCAGGAGCCAGGAAGTAATCAAGAAATCAAGGAGTTTGCAGCCGGCTACAACGTCAAGTTTGACATGTACAGCAAGATCTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS GCA 72 bp | CAGGAATGGGCTCCATCCGGCGAGGGCGCGCCCTCCTaGGGCGGCGCGCGCGCGCTTTCCTTCGCCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QEWAPSGEGAPS*GGARALSFAEG Trigger: GCCCTCGGCGAAGGAAAGCGCGCGCGCGCCGCCGCAGGAGGGCGCGCCCTCGCCGGATGGAGCCCATTCCTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS GCA 72 bp | ACAGCGCCAATCATCGCGGGATGCACACATGGTGCCTaGCAGACCAGGCGCAGCCAGAGCCCCGCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAPIIAGCTHGA*QTRRSQSPAQQ Trigger: CTGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTGGCAGGCACCATGTGTGCATCCCGCGATGATTGGCGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS GCA 72 bp | GTGCATGGAGCGCGCACAGCGCCAATCATCGCGGGATaGACACATGGTGCCTGCCAGACCAGGCGCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VHGARTAPIIAG*THGACQTRRSQ Trigger: CTGGCTGCGCCTGGTCTGGCAGGCACCATGTGTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105372.9 |
||
| CDS GCA 72 bp | CGCGGGATGCACACAAGCCCAGGAACTCGGAGCTGTTaGAGTACTGGGGAGGCTCTTGCAGCAGAGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGMHTSPGTRSC*STGEALAAEAP Trigger: CGGGGCCTCTGCTGCAAGAGCCTCCCCAGTACTGCAACAGCTCCGAGTTCCTGGGCTTGTGTGCATCCCGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS TCA 72 bp | AGTACTGGGGAGGCTCTTGCAGCAGAGGCCCCGGGTTaGAAGGTTCAGGAATGGGCTCCATCCGGCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STGEALAAEAPG*KVQEWAPSGEG Trigger: GCCCTCGCCGGATGGAGCCCATTCCTGAACCTTTCAACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS CAA 72 bp | CAGTACTGGGGAGGCTCTTGCAGCAGAGGCCCCGGGTaGAAAGGTTCAGGAATGGGCTCCATCCGGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QYWGGSCSRGPG*KGSGMGSIRRG Trigger: CCCTCGCCGGATGGAGCCCATTCCTGAACCTTTCAACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS CCA 72 bp | TGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTGCATaGAGCGCGCACAGCGCCAATCATCGCGGGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CARRCPWLRIRA*SAHSANHRGMH Trigger: GTGCATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS TCA 72 bp | ATCCAGGCAGACCATGTGCCCGTCGATGTCCTTGGCTaGGAATTCGTGCATGGAGCGCGCACAGCGCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: IQADHVPVDVLG*EFVHGARTAPI Trigger: GATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCCTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS GCA 72 bp | ACCATGTGCCCGTCGATGTCCTTGGCTGAGAATTCGTaGATGGAGCGCGCACAGCGCCAATCATCGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TMCPSMSLAENS*MERAQRQSSRD Trigger: ATCCCGCGATGATTGGCGCTGTGCGCGCTCCATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS CAA 90 bp | ACACAAGCCCAGGAACTCGGAGCTGTTGCAGTACTGGGGAGGCTCTaGCAGCAGAGGCCCCGGGTTGAAAGGTTCAGGAATGGGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TQAQELGAVAVLGRL*QQRPRVERFRNGLH Trigger: ATGGAGCCCATTCCTGAACCTTTCAACCCGGGGCCTCTGCTGCAAGAGCCTCCCCAGTACTGCAACAGCTCCGAGTTCCTGGGCTTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097227.11 |
||
| CDS CCA 72 bp | ACGGCAGGTCCTTCTCTATCACCTGGGGCTCCTCCATaGGACCATAGCGCTTCACCACGCAGCCGTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: TAGPSLSPGAPP*DHSASPRSRSY Trigger: ATAAGAACGGCTGCGTGGTGAAGCGCTATGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGACCTGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CCA 72 bp | TTGATGGCATTTCCCAGCATGCCCCTGCCCTTGGGCTaGACTTTCATCCATTTCCACAGTGGGTGGGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: LMAFPSMPLPLG*TFIHFHSGWAS Trigger: CGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS GCA 72 bp | CACACGAAACCCCTGTACTTATCCAGGCAGACCATGTaGCCGTCGATGTCCTTGGCTGAGAATTCGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: HTKPLYLSRQTM*PSMSLAENSCM Trigger: CATGCACGAATTCTCAGCCAAGGACATCGACGGGCACATGGTCTGCCTGGATAAGTACAGGGGTTTCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 |
||
| CDS CCA 72 bp | CCTGCCCTTGGGCTGGACTTTCATCCATTTCCACAGTaGGTGGGCATCGTCCCCATTTACACAGATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PALGLDFHPFPQ*VGIVPIYTDLA Trigger: AGCAAGATCTGTGTAAATGGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CAA 90 bp | TTGGTAAAGTTCCATTTGATGGCATTTCCCAGCATGCCCCTGCCCTaGGGCTGGACTTTCATCCATTTCCACAGTGGGTGGGCATCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVKFHLMAFPSMPLP*GWTFIHFHSGWASS Trigger: GGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCATCAAATGGAACTTTACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS TCA 72 bp | TTACGTCAGTTTTGCCTCATTGCGAGGCCACGTTGGTaGCGATGCACACGAAACCCCTGTACTTATCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRQFCLIARPRW*RCTRNPCTYPG Trigger: GCCTGGATAAGTACAGGGGTTTCGTGTGCATCGTCACCAACGTGGCCTCGCAATGAGGCAAAACTGACGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CCA 72 bp | CCCTTGGGCTGGACTTTCATCCATTTCCACAGTGGGTaGGCATCGTCCCCATTTACACAGATCTTGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PLGWTFIHFHSG*ASSPFTQILLY Trigger: GTACAGCAAGATCTGTGTAAATGGGGACGATGCCCACCCACTGTGGAAATGGATGAAAGTCCAGCCCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CAA 72 bp | CTTGACGTTGTAGCCGGCTGCAAACTCCTTGATTTCTaGATTACTTCCTGGCTCCTGCCTCCCAAACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LDVVAGCKLLDF*ITSWLLPPKLV Trigger: AACCAGTTTGGGAGGCAGGAGCCAGGAAGTAATCAAGAAATCAAGGAGTTTGCAGCCGGCTACAACGTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||
| CDS CAA 72 bp | CGCTTCACCACGCAGCCGTTCTTATCAATGAGAAACTaGGTAAAGTTCCATTTGATGGCATTTCCCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RFTTQPFLSMRN*VKFHLMAFPSM Trigger: CATGCTGGGAAATGCCATCAAATGGAACTTTACCAAGTTTCTCATTGATAAGAACGGCTGCGTGGTGAAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097227.11 ENSMUST00000105372.9 ENSMUST00000183037.3 |
||