Pregenerated sensors for GPX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018339Ensembl transcript IDs: ENSMUST00000082430.11, ENSMUST00000125094.9, ENSMUST00000149324.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGGCGCGGGGGTAGTGTCCCTGCCTGGGAGCCTAAGCCTGAATaGACTAAGGGCTGGCACCACAGACGGGCTCAGGGGAGGCCCGCC | + |
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Preference number: 1 (lower is better) Translates to: QRRGGSVPAWEPKPE*TKGWHHRRAQGRPA Trigger: GGCGGGCCTCCCCTGAGCCCGTCTGTGGTGCCAGCCCTTAGTGCATTCAGGCTTAGGCTCCCAGGCAGGGACACTACCCCCGCGCCTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 90 bp | GGTAGTGTCCCTGCCTGGGAGCCTAAGCCTGAATGCACTAAGGGCTaGCACCACAGACGGGCTCAGGGGAGGCCCGCCCACAAGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: GSVPAWEPKPECTKG*HHRRAQGRPAHKGF Trigger: GAAGCCCTTGTGGGCGGGCCTCCCCTGAGCCCGTCTGTGGTGCCAGCCCTTAGTGCATTCAGGCTTAGGCTCCCAGGCAGGGACACTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 90 bp | GGGCTTGGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAGGAGGCTaGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGGCCCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GLGGSGGSFRKEEGG*WCVVWACGRCWPQE Trigger: TTCTTGGGGCCAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 90 bp | CTCACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGGCTTaGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAGGAGGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LTVVLAGLRSTVGWA*GLRRVLQEGRRRLV Trigger: CACCAGCCTCCTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 90 bp | ATCGCGCTCACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTGGGATaGGCTTGGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: IALTVVLAGLRSTVG*AWGLRRVLQEGRRR Trigger: CCTCCTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGCGCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 90 bp | ACCTTTACTGGGCAGATGGGGGTGTTGAGATACCAGTGGACAGAGTaGGAGGATAGCATGTCCTCCAGAGGCGCGGGGGTAGTGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TFTGQMGVLRYQWTE*EDSMSSRGAGVVSL Trigger: CAGGGACACTACCCCCGCGCCTCTGGAGGACATGCTATCCTCTCACTCTGTCCACTGGTATCTCAACACCCCCATCTGCCCAGTAAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 90 bp | TGTGGGCATGTGGGAGATGCTGGCCCCAAGAATGATGTTCAGGTTTaGGCAGAACCATTGGACCTAGAACTTGTGTTTCCTTTGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CGHVGDAGPKNDVQV*AEPLDLELVFPLGS Trigger: TGAGCCCAAAGGAAACACAAGTTCTAGGTCCAATGGTTCTGCTCAAACCTGAACATCATTCTTGGGGCCAGCATCTCCCACATGCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 90 bp | TGGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGGCCCCAAGAATaGTGTTCAGGTTTGAGCAGAACCATTGGACCTAGAACTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: WWCVVWACGRCWPQE*CSGLSRTIGPRTCV Trigger: AACACAAGTTCTAGGTCCAATGGTTCTGCTCAAACCTGAACATCATTCTTGGGGCCAGCATCTCCCACATGCCCACACTACACACCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR GCA 90 bp | CTGGGACAATTGTCACGTGTCCACAGTGGTTCAGACACACAGTTGTaGCAGGCTTGTCTTTTATGTAATAAGAAAGAGAATCTGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LGQLSRVHSGSDTQL*QACLLCNKKENLGW Trigger: CCACCCCAGATTCTCTTTCTTATTACATAAAAGACAAGCCTGGCACAACTGTGTGTCTGAACCACTGTGGACACGTGACAATTGTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCCCGCCCACAAGGGCTTCGGGCCCCTCCTTCATAGAGACACCACCCCTTGGTGGTGTGTAGTGTaGGCATGTGGGAGATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GRPAHKGFGPLLHRDTTPWWCVV*ACGRCW Trigger: CCAGCATCTCCCACATGCCCACACTACACACCACCA...AGGGGTGGTGTCTCTATGAAGGAGGGGCCCGAAGCCCTTGTGGGCGGGCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGTCCTCGGCCCTTGCATaGTGGGCAGGGGGTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QEGRRRLVVCSVGMWEMLSSALA*WAGGRG Trigger: ACCCCTACCCCCTGCCCATCATGCAAGGGCCGAGGA...CAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CAA 90 bp | GCTCACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGGCTaGGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAGGAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: AHSCLGWSQEHCGMG*GAQEGPSGRKKEAG Trigger: ACCAGCCTCCTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGATGTGGCTTCCTTCCTaGAGAGCCCCTCCTCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QEGRRRLVVCSVGMWEMLMWLPS*RAPPRP Trigger: GGGCCGAGGAGGGGCTCTTCAGGAAGGAAGCCACAT...CAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGGCTTGGGGGTGTAGTGTGGGCATGTaGGAGATGCTGGCCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ALTVVLAGLRSTVGWAWGCSVGM*EMLAPR Trigger: TCTTGGGGCCAGCATCTCCCACATGCCCACACTACA...CCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGCCCGCCCACAAGGGCTTCGGGCCCCTCCTTCATAGAGACACCACCCCTTCAGACACACAGTTGTaGCAGGCTTGTCTTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: GRPAHKGFGPLLHRDTTPSDTQL*QACLLC Trigger: ACATAAAAGACAAGCCTGGCACAACTGTGTGTCTGA...AGGGGTGGTGTCTCTATGAAGGAGGGGCCCGAAGCCCTTGTGGGCGGGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CAA 90 bp | AGCAGGCAGATACGTGGCTGTGTAGCCATGCACACACTGGGACAATaGTCACGTGTCCACAGTGGTTCAGACACACAGTTGTGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRQIRGCVAMHTLGQ*SRVHSGSDTQLCQA Trigger: AGCCTGGCACAACTGTGTGTCTGAACCACTGTGGACACGTGACAATTGTCCCAGTGTGTGCATGGCTACACAGCCACGTATCTGCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGAAAGACCTTTACTGGGCAGATGGGGGTGTTGAGATACCAGTGGACAGAGGGGTGGGGGTAGAATaGCTGGGAATGTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQKDLYWADGGVEIPVDRGVGVE*LGMWLP Trigger: AGGAAGCCACATTCCCAGTCATTCTACCCCCACCCC...TCTGTCCACTGGTATCTCAACACCCCCATCTGCCCAGTAAAGGTCTTTCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CAA 90 bp | ACACTGGGACAATTGTCACGTGTCCACAGTGGTTCAGACACACAGTaGTGCCAGGCTTGTCTTTTATGTAATAAGAAAGAGAATCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: TLGQLSRVHSGSDTQ*CQACLLCNKKENLG Trigger: CCCCAGATTCTCTTTCTTATTACATAAAAGACAAGCCTGGCACAACTGTGTGTCTGAACCACTGTGGACACGTGACAATTGTCCCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR GCA 72 bp | GGGGGTAGTGTCCCTGCCTGGGAGCCTAAGCCTGAATaGACTAAGGGCTGGCACCACAGACGGGCTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GGSVPAWEPKPE*TKGWHHRRAQG Trigger: CCCCTGAGCCCGTCTGTGGTGCCAGCCCTTAGTGCATTCAGGCTTAGGCTCCCAGGCAGGGACACTACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | CGCTCACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTaGGATGGGCTTGGGGGCTCAGGAGGGTCCTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RSQLSWLVSGAL*DGLGGSGGSFR Trigger: CCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | TCGGGCCCCTCCTTCATAGAGACACCACCCCTGACCTaGGGTACACGGCCATCGCGCTCACAGTTGTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SGPSFIETPPLT*GTRPSRSQLSW Trigger: CCAAGACAACTGTGAGCGCGATGGCCGTGTACCCCAGGTCAGGGGTGGTGTCTCTATGAAGGAGGGGCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | GTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGGCTTaGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: VLAGLRSTVGWA*GLRRVLQEGRR Trigger: CCTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCCGTAAACACAGATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTGGCCCCTCCTCGGCCCTaGCATGATGGGCAGGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: PSRKHRWTIPGFQAGRYVAPPRP*HDGQGV Trigger: TACCCCCTGCCCATCATGCAAGGGCCGAGGAGGGGC...CACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATCTGTGTTTACGGCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 72 bp | GGGCAGATGGGGGTGTTGAGATACCAGTGGACAGAGTaGGAGGATAGCATGTCCTCCAGAGGCGCGGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GQMGVLRYQWTE*EDSMSSRGAGV Trigger: TACCCCCGCGCCTCTGGAGGACATGCTATCCTCTCACTCTGTCCACTGGTATCTCAACACCCCCATCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | ACAGTTGTCTTGGCTGGTCTCAGGAGCACTGTGGGATaGGCTTGGGGGCTCAGGAGGGTCCTTCAGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: TVVLAGLRSTVG*AWGLRRVLQEG Trigger: TCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | GATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTaGCTGTGTAGCCATGCACACACTGGGACAATTGTC | + |
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Preference number: 3 (lower is better) Translates to: DGPSLGFKQADT*LCSHAHTGTIV Trigger: GACAATTGTCCCAGTGTGTGCATGGCTACACAGCCACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 72 bp | GTAGTGTGGGCATGTGGGAGATGCTGGCCCCAAGAATaGTGTTCAGGTTTGAGCAGAACCATTGGACCTAGA | + |
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Preference number: 3 (lower is better) Translates to: VVWACGRCWPQE*CSGLSRTIGPR Trigger: TCTAGGTCCAATGGTTCTGCTCAAACCTGAACATCATTCTTGGGGCCAGCATCTCCCACATGCCCACACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CCA 72 bp | AAATATGAGGGTGTTGTGCCAAGCCGTAAACACAGATaGACCATCCCTGGGTTTCAAGCAGGCAGATACGTG | + |
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Preference number: 3 (lower is better) Translates to: KYEGVVPSRKHR*TIPGFQAGRYV Trigger: CACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATCTGTGTTTACGGCTTGGCACAACACCCTCATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR TCA 72 bp | GTGGGAGATGCTGGCCCCAAGAATGATGTTCAGGTTTaGGCAGAACCATTGGACCTAGAACTTGTGTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: VGDAGPKNDVQV*AEPLDLELVFP Trigger: AGGAAACACAAGTTCTAGGTCCAATGGTTCTGCTCAAACCTGAACATCATTCTTGGGGCCAGCATCTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CAA 72 bp | CCCCTGACCTGGGGTACACGGCCATCGCGCTCACAGTaGTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: PLTWGTRPSRSQ*SWLVSGALWDG Trigger: CCCATCCCACAGTGCTCCTGAGACCAGCCAAGACAACTGTGAGCGCGATGGCCGTGTACCCCAGGTCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGCCTGGCGCTCAGGGCTaGCTGCCGCCTCATGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: QEGRRRLVVCSVGMWEMLPGAQG*LPPHVR Trigger: TCTTACATGAGGCGGCAGGCAGCCCTGAGCGCCAGG...CAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| 3UTR CAA 72 bp | TGTCTTGGCTGGTCTCAGGAGCACTGTGGGATGGGCTaGGGGGCTCAGGAGGGTCCTTCAGGAAGGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLGWSQEHCGMG*GAQEGPSGRKK Trigger: CTTCTTCCTTCCTGAAGGACCCTCCTGAGCCCCCAAGCCCATCCCACAGTGCTCCTGAGACCAGCCAAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR GCA 90 bp | CAGATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTGGCTGTGTAGCCATGGGACAGAAGGCAGGATaGCCGGAGGATCCGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QMDHPWVSSRQIRGCVAMGQKAG*PEDPGH Trigger: ATGGCCCGGATCCTCCGGGCATCCTGCCTTCTGTCC...CATGGCTACACAGCCACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGATGCTGCGCCTGGCTCCTGTTTaGCAAATTGGTTGGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QEGRRRLVVCSVGMWEMLRLAPV*QIGWKG Trigger: TCCCTTCCAACCAATTTGGCAAACAGGAGCCAGGCG...CAGCATCTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR CCA 90 bp | GATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTGGCTGTGTAGCCATGCACCAGGAGTTCTGCAGTaGGAGGGCAGGAGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DGPSLGFKQADTWLCSHAPGVLQ*EGRSSS Trigger: TGAAGAACTCCTGCCCTCCCACTGCAGAACTCCTGG...TGCATGGCTACACAGCCACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR TCA 90 bp | GATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTGGCTGTGTAGCCATGCAAAGGGAAGCCCAGAATaGCCAAGCCAAATGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: DGPSLGFKQADTWLCSHAKGSPE*PSQMAQ Trigger: TTGGGCCATTTGGCTTGGTCATTCTGGGCTTCCCTT...TGCATGGCTACACAGCCACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCCGCCCACAAGGGCTTCGGGCCCCTCCTTCATAGAGACACCACCCCTGAGGATATATTTGCCTaGATACTGCTTAAAAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: GRPAHKGFGPLLHRDTTPEDIFA*ILLKRN Trigger: ATTCCTTTTAAGCAGTATGCAGGCAAATATATCCTC...AGGGGTGGTGTCTCTATGAAGGAGGGGCCCGAAGCCCTTGTGGGCGGGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR CCA 90 bp | GTCCTTCAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGTCCTGTTTGCCAAATTaGTTGGAAGGGAAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLQEGRRRLVVCSVGMWESCLPN*LEGKPR Trigger: TCTGGGCTTCCCTTCCAACCAATTTGGCAAACAGGA...CTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR GCA 90 bp | CAGATACGTGGCTGTGTAGCCATGCACACACTGGGACAATTGTCACGTGTCCACTATTTGCCTGCATACTaGTTAAAAGGAATGTATTCC | + |
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Preference number: 4 (lower is better) Translates to: QIRGCVAMHTLGQLSRVHYLPAY*LKGMYS Trigger: GGAATACATTCCTTTTAAGCAGTATGCAGGCAAATA...GTGGACACGTGACAATTGTCCCAGTGTGTGCATGGCTACACAGCCACGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR CAA 90 bp | GATGGACCATCCCTGGGTTTCAAGCAGGCAGATACGTGGCTGTGTAGCCATGCAATGTCCATCTTGACGTaGCTGACTGTGGTCCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: DGPSLGFKQADTWLCSHAMSILT*LTVVRW Trigger: CCACCGGACCACAGTCAGCAACGTCAAGATGGACAT...TGCATGGCTACACAGCCACGTATCTGCCTGCTTGAAACCCAGGGATGGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR CAA 90 bp | GTCCTTCAGGAAGGAAGAAGGAGGCTGGTGGTGTGTAGTGTGGGCATGTGGGAGGACAGGATGTCCATCTaGACGTTGCTGACTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: VLQEGRRRLVVCSVGMWEDRMSI*TLLTVV Trigger: GACCACAGTCAGCAACGTCAAGATGGACATCCTGTC...CTCCCACATGCCCACACTACACACCACCAGCCTCCTTCTTCCTTCCTGAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS TCA 90 bp | CAAGCAGACCTGAGTTTGAGGCCATCTTGGTCCACAGAGCAAGTCTaGGGACAGCCAGGGCTACCCAGAAACCCAAGGTATTGGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: QADLSLRPSWSTEQV*GQPGLPRNPRYWSV Trigger: GACAGACCAATACCTTGGGTTTCTGGGTAGCCCTGGCTGTCCTCAGACTTGCTCTGTGGACCAAGATGGCCTCAAACTCAGGTCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149324.3 |
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| CDS-3UTR CAA 90 bp | CAGATACGTGGCTGTGTAGCCATGCACACACTGGGACAATTGTCACGTGTCCACTCGCCTGGCTCCTGTTaGCCAAATTGGTTGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: QIRGCVAMHTLGQLSRVHSPGSC*PNWLEG Trigger: CCCTTCCAACCAATTTGGCAAACAGGAGCCAGGCGA...GTGGACACGTGACAATTGTCCCAGTGTGTGCATGGCTACACAGCCACGTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS-3UTR CAA 90 bp | CTGCAGAAAGACCTTTACTGGGCAGATGGGGGTGTTGAGATACCAGTGGACAGATGTTTGCCAAATTGGTaGGAAGGGAAGCCCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LQKDLYWADGGVEIPVDRCLPNW*EGKPRM Trigger: CATTCTGGGCTTCCCTTCCAACCAATTTGGCAAACA...TCTGTCCACTGGTATCTCAACACCCCCATCTGCCCAGTAAAGGTCTTTCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS CAA 90 bp | GATGGTACCACTCATACCGCCATGGCAGTCTGTCTTAGACTTCTCTaGTCCCCGGCCCGGCGGAACAAACCCGGCCAGGAGCAGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: DGTTHTAMAVCLRLL*SPARRNKPGQEQGQ Trigger: CTGTCCCTGCTCCTGGCCGGGTTTGTTCCGCCGGGCCGGGGACAAGAGAAGTCTAAGACAGACTGCCATGGCGGTATGAGTGGTACCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082430.11 ENSMUST00000125094.9 ENSMUST00000149324.3 |
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| CDS CAA 72 bp | ACTCATACCGCCATGGCAGTCTGTCTTAGACTTCTCTaGTCCCCGGCCCGGCGGAACAAACCCGGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: THTAMAVCLRLL*SPARRNKPGQE Trigger: CTCCTGGCCGGGTTTGTTCCGCCGGGCCGGGGACAAGAGAAGTCTAAGACAGACTGCCATGGCGGTATGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082430.11 ENSMUST00000125094.9 ENSMUST00000149324.3 |
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| CDS CCA 72 bp | AGGATGTCCATCTTGACGTTGCTGACTGTGGTCCGGTaGTACCAGCGCATAACCGGTATGCCATCTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RMSILTLLTVVR*YQRITGMPSGP Trigger: GGGGCCAGATGGCATACCGGTTATGCGCTGGTACCACCGGACCACAGTCAGCAACGTCAAGATGGACATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082430.11 |
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| CDS CAA 72 bp | CTGAGGACAGCCAGGGCTACCCAGAAACCCAAGGTATaGGTCTGTCAGACCTCAGTAGCTGGCTACGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LRTARATQKPKV*VCQTSVAGYVD Trigger: GTCAACGTAGCCAGCTACTGAGGTCTGACAGACCAATACCTTGGGTTTCTGGGTAGCCCTGGCTGTCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149324.3 |
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| CDS CAA 90 bp | AGAGCAAGTCTGAGGACAGCCAGGGCTACCCAGAAACCCAAGGTATaGGTCTGTCAGACCTCAGTAGCTGGCTACGTTGACAAAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RASLRTARATQKPKV*VCQTSVAGYVDKED Trigger: ATCCTCTTTGTCAACGTAGCCAGCTACTGAGGTCTGACAGACCAATACCTTGGGTTTCTGGGTAGCCCTGGCTGTCCTCAGACTTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149324.3 |
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| CDS CAA 90 bp | ACCAAGCCAAATGGCCCAAGTTCTTCTTGTAGTGCATTCAGTTCTTaGATCTCAGCATTTAGGAGGCAAGCAGACCTGAGTTTGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TKPNGPSSSCSAFSS*ISAFRRQADLSLRP Trigger: TGGCCTCAAACTCAGGTCTGCTTGCCTCCTAAATGCTGAGATCAAAGAACTGAATGCACTACAAGAAGAACTTGGGCCATTTGGCTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149324.3 |
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| CDS CAA 72 bp | AATGGCCCAAGTTCTTCTTGTAGTGCATTCAGTTCTTaGATCTCAGCATTTAGGAGGCAAGCAGACCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: NGPSSSCSAFSS*ISAFRRQADLS Trigger: ACTCAGGTCTGCTTGCCTCCTAAATGCTGAGATCAAAGAACTGAATGCACTACAAGAAGAACTTGGGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149324.3 |
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