Pregenerated sensors for GPX1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063856

Ensembl transcript IDs: ENSMUST00000082429.8

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GTAGTGAAACCACCTTTCATTAGGTGGAAAGGCATCGGGAATGGATaGGACCAGCGCCCATCTGAGGGGATTTTCCTGGAAATCAGGTGT	+
Preference number: 1 (lower is better) Translates to: VVKPPFIRWKGIGNG*DQRPSEGIFLEIRC Trigger: ACACCTGATTTCCAGGAAAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGATGCCTTTCCACCTAATGAAAGGTGGTTTCACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
3UTR TCA 72 bp	GAAAGGCATCGGGAATGGATGGGACCAGCGCCCATCTaGGGGGATTTTCCTGGAAATCAGGTGTTTCTCCGT	+
Preference number: 3 (lower is better) Translates to: ERHREWMGPAPI*GDFPGNQVFLR Trigger: ACGGAGAAACACCTGATTTCCAGGAAAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGATGCCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
3UTR CCA 72 bp	CCACCTTTCATTAGGTGGAAAGGCATCGGGAATGGATaGGACCAGCGCCCATCTGAGGGGATTTTCCTGGAA	+
Preference number: 3 (lower is better) Translates to: PPFIRWKGIGNG*DQRPSEGIFLE Trigger: TTCCAGGAAAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGATGCCTTTCCACCTAATGAAAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
3UTR CCA 72 bp	ATGGATGGGACCAGCGCCCATCTGAGGGGATTTTCCTaGAAATCAGGTGTTTCTCCGTGCAAATTTAGAGGA	+
Preference number: 3 (lower is better) Translates to: MDGTSAHLRGFS*KSGVSPCKFRG Trigger: TCCTCTAAATTTGCACGGAGAAACACCTGATTTCCAGGAAAATCCCCTCAGATGGGCGCTGGTCCCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
3UTR CCA 72 bp	ACTTTATTCTTAGTAGTGAAACCACCTTTCATTAGGTaGAAAGGCATCGGGAATGGATGGGACCAGCGCCCA	+
Preference number: 3 (lower is better) Translates to: TLFLVVKPPFIR*KGIGNGWDQRP Trigger: TGGGCGCTGGTCCCATCCATTCCCGATGCCTTTCCACCTAATGAAAGGTGGTTTCACTACTAAGAATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
CDS-3UTR CCA 90 bp	TTAGGTGGAAAGGCATCGGGAATGGATGGGACCAGCGCCCATCTGAGGGGATTTGTCGTCACTGGGTGTTaGCAAGGCATTCCGCAGGAA	+
Preference number: 4 (lower is better) Translates to: LGGKASGMDGTSAHLRGFVVTGC*QGIPQE Trigger: TTCCTGCGGAATGCCTTGCCAACACCCAGTGACGAC...AAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGATGCCTTTCCACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
CDS-3UTR CCA 90 bp	TTAGGTGGAAAGGCATCGGGAATGGATGGGACCAGCGCCCATCTGAGGGGATTTGAGTTGCCAGACTGCTaGGACAGCAGGGTTTCTATG	+
Preference number: 4 (lower is better) Translates to: LGGKASGMDGTSAHLRGFELPDC*DSRVSM Trigger: CATAGAAACCCTGCTGTCCCAGCAGTCTGGCAACTC...AAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGATGCCTTTCCACCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082429.8
CDS-3UTR GCA 90 bp	TCGGGAATGGATGGGACCAGCGCCCATCTGAGGGGATTTTCCTGGAAATCAGGTGAATCTCTTCATTCTTaGCATTCTCCTGGTGTCCGA	+
Preference number: 4 (lower is better) Translates to: SGMDGTSAHLRGFSWKSGESLHS*HSPGVR Trigger: TCGGACACCAGGAGAATGGCAAGAATGAAGAGATTC...ACCTGATTTCCAGGAAAATCCCCTCAGATGGGCGCTGGTCCCATCCATTCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082429.8