Pregenerated sensors for GPSM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027883Ensembl transcript IDs: ENSMUST00000029482.16, ENSMUST00000145558.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGGTaGCTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCA | + |
|
Preference number: 1 (lower is better) Translates to: NVSPSVLNIHTLKMW*LLQWRAPCSVLRGP Trigger: TGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGTCACCACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR GCA 90 bp | GTCTTTGCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATaGGGGCCAGAAGATCACTGTCTCGTAAACTCGTTAGATGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: VFAFLVNFLLSVCTK*GPEDHCLVNSLDEG Trigger: GCCTTCATCTAACGAGTTTACGAGACAGTGATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGCAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATACCCTAAAAATGTGGTaGCTGCTACAGTGGCGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDTLKMW*LLQWRA Trigger: AGCTCGCCACTGTAGCAGTCACCACATTTTTAGGGT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATAATCTGCTATATTCATaGGCAGGTACAAAAAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDNLLYS*AGTKSP Trigger: GGGACTTTTTGTACCTGCCCATGAATATAGCAGATT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATTCTCATTTCCCTCACTaGCTTTGCCTAAAAATATAT | + |
|
Preference number: 2 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDSHFPH*LCLKIY Trigger: ATATATTTTTAGGCAAAGCCAGTGAGGGAAATGAGA...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR TCA 72 bp | GGTGACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTaGGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: GDCYSGELPAVS*GDQSFSSVGYH Trigger: GTGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR TCA 72 bp | CCCTCAGTACTCAACATTCACACCCTAAAAATGTGGTaGCTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSVLNIHTLKMW*LLQWRAPCSVL Trigger: CAGGACACTGCAGGGAGCTCGCCACTGTAGCAGTCACCACATTTTTAGGGTGTGAATGTTGAGTACTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR GCA 72 bp | GTCTTTGCTTTCTTAGTGAATTTTCTTCTAAGTGTCTaGACCAAATGCGGGCCAGAAGATCACTGTCTCGTA | + |
|
Preference number: 3 (lower is better) Translates to: VFAFLVNFLLSV*TKCGPEDHCLV Trigger: TACGAGACAGTGATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGCAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR GCA 72 bp | TTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATaGGGGCCAGAAGATCACTGTCTCGTAAACTCGTTA | + |
|
Preference number: 3 (lower is better) Translates to: FLVNFLLSVCTK*GPEDHCLVNSL Trigger: TAACGAGTTTACGAGACAGTGATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| 3UTR CCA 72 bp | ATTATTTCCAATAAACAATGCAATCTGCTATATTCATaGGCAGGTACAAAAAGTCCCTGTCAACTAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IISNKQCNLLYS*AGTKSPCQLAP Trigger: AGGAGCTAGTTGACAGGGACTTTTTGTACCTGCCCATGAATATAGCAGATTGCATTGTTTATTGGAAATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTGTCTCCGTCCCAGCTTaGCGCCTGCACCATGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TATVASSLQCPEGTSPFLVSVPA*RLHHVS Trigger: GCTTACATGGTGCAGGCGCCAAGCTGGGACGGAGAC...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCTGAAACTGGCCCTCTaGTCATCCAGACGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TATVASSLQCPEGTSPFLLKLAL*SSRRRL Trigger: GAGCCGCCGTCTGGATGACCAGAGGGCCAGTTTCAG...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAAACTCTCCTGTATCCTaGGGACCCGGGCAACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPNSPVS*GPGQPK Trigger: CTTTGGTTGCCCGGGTCCGCAGGATACAGGAGAGTT...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCACACCAATCCGATCCTTaGGCTCTTGGGCGATTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPHQSDP*ALGRLL Trigger: TAGCAATCGCCCAAGAGCTCAAGGATCGGATTGGTG...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAGGTAGCAGAAGCAGCTaGTGTGGATGTTGTGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPGSRSS*CGCCAT Trigger: TGTCGCACAACATCCACAGCAGCTGCTTCTGCTACC...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCATGTCAGGCGGAGCCCTaGCAAATTACTGAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPCQAEP*QITETG Trigger: GCCAGTTTCAGTAATTTGCCAGGGCTCCGCCTGACA...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAAGACCAAGAACCATCTaGAGGTCTGAGAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPRPRTI*RSERFS Trigger: GCTGAACCTCTCAGACCTGCAGATGGTTCTTGGTCT...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTTAGCTTCCCCAAGTTaGTCTCCAATAGTCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TATVASSLQCPEGTSPFLLASPS*SPIVRA Trigger: TGCACGGACTATTGGAGACCAACTTGGGGAAGCTAA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAGGAGGAGCACATCTTTaGTCATCTAATCTTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPGGAHL*SSNLDP Trigger: GGGGTCAAGATTAGATGATCAAAGATGTGCTCCTCC...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCACTGTTTGGATCTCTTTaGAGCAGAACTCTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPLFGSL*SRTLCS Trigger: TGAGCAGAGAGTTCTGCTGCAAAGAGATCCAAACAG...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTAGAGTTAAGTCATGGTaGTGGTATTCTAACGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TATVASSLQCPEGTSPFLRVKSW*WYSNAL Trigger: CAAAGCGTTAGAATACCACCACCATGACTTAACTCT...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAATTTCTCACGTCTTCTaGAAACTCTCCTGTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPISHVF*KLSCIL Trigger: CAGGATACAGGAGAGTTTCCAGAAGACGTGAGAAAT...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATAGGAGACGCTGCTCGTaGGCTATAACTGCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDRRRCS*AITASL Trigger: CAGGGATGCAGTTATAGCTCACGAGCAGCGTCTCCT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATGCTCTGTCTTTAAGCTaGCGAGCCAGCAGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDALSLS*RASSSV Trigger: GACACTGCTGCTGGCTCGGCAGCTTAAAGACAGAGC...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCATCATGGAATTATTTGTaGTGTAGCTCAGACCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPSWNYL*CSSDQE Trigger: TTCTTGGTCTGAGCTACAGCACAAATAATTCCATGA...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACGGTGGTCCACGGAGTTaGTGGCGTCTTGGAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDGGPRS*WRLGEP Trigger: AGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACC...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATGGAGGTAGTGTGTGTTaGCAAGGTTCCCAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDGGSVC*QGSQRL Trigger: GAGCCTTTGGGAACCTTGGCAACACACACTACCTCC...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATTGCCCTTCAGTCTGTTaGCAAACAGGAGCTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDCPSVC*QTGALQ Trigger: CTGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCA...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACGCCCTGGCAAATTACTaGAACTGGCCCTCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDALANY*NWPSGH Trigger: ATGACCAGAGGGCCAGTTTCAGTAATTTGCCAGGGC...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | GAGACAGAAGAATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGTGTAAGTGGCACCTCTaGTCATCCATCCTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETEECQSLSTQHSHPKNVCKWHL*SSILLL Trigger: GAGCAACAGGATGGATGACCAGAGGTGCCACTTACA...CACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATTCTTCTGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | GAGACAGAAGAATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGCGATCCTTGAGCTCTTaGGCGATTGCTAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETEECQSLSTQHSHPKNVRSLSS*AIAKCF Trigger: AAAGCACTTAGCAATCGCCCAAGAGCTCAAGGATCG...CACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATTCTTCTGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | GAGACAGAAGAATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGGTCCCCAACCTCTCTTaGAATTTCCAAGTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETEECQSLSTQHSHPKNVVPNLS*NFQVLF Trigger: GAAAAGCACTTGGAAATTTCAAGAGAGGTTGGGGAC...CACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATTCTTCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GAGACAGAAGAATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGATTGTAGAGCGCTCTTaGTTCTCCCACCTTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ETEECQSLSTQHSHPKNVIVERS*FSHLVI Trigger: AATGACAAGGTGGGAGAAGCAAGAGCGCTCTACAAT...CACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATTCTTCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACCAGTTTCCTTGTAAGTaGCACCTCTGGTCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDQFPCK*HLWSSI Trigger: GATGGATGACCAGAGGTGCCACTTACAAGGAAACTG...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACTGCATTGCTTGGTCATaGTTTCCCAGAGCTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDCIAWS*FPRAVY Trigger: ATACACAGCTCTGGGAAATCATGACCAAGCAATGCA...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATATCTCCAATCGTGTCTaGACTGATTTTCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDISNRV*TDFLLG Trigger: TCCCAGAAGAAAATCAGTTCAGACACGATTGGAGAT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACCAGGAGCTTTGCAGATaGTTTGGCAATGAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDQELCR*FGNERF Trigger: AAACCTCTCATTGCCAAACCATCTGCAAAGCTCCTG...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATAATGGTCTTCCCTCATaGTTATCAAATTTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDNGLPS*LSNFPP Trigger: TGGAGGGAAATTTGATAAGCATGAGGGAAGACCATT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATTTCAGCAAAATGCATTaGTTGGTCATGATTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDFSKMH*LVMISQ Trigger: CTGGGAAATCATGACCAAGCAATGCATTTTGCTGAA...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATCTGCACCATGTAAGCTaGCATCAATTTCAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDLHHVS*HQFQCS Trigger: AGAACATTGAAATTGATGGCAGCTTACATGGTGCAG...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACCAAAGCTTTTCCCTTTaGCGTGATAGACATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKKSLSTSSLKMASVRKDQSFSL*RDRHFQ Trigger: TTGGAAATGTCTATCACGCCAAAGGGAAAAGCTTTG...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATTGTTCTCAGACATCATaGAATTATTTGTGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDCSQTS*NYLCCS Trigger: GCTACAGCACAAATAATTCCATGATGTCTGAGAACA...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | TTCTGGGAGCGTGGCGCGCGGTGGTCCACGGAGTTGCTGGCGTCTTaGAGAACCTTAGTGCAGGCGCTGCCGCTTTTGTACTTTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FWERGARWSTELLAS*RTLVQALPLLYFLP Trigger: GGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAAGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | CCAATCGTGTCTGAACTGATTTTCTTCTGGGAGCGTGGCGCGCGGTaGTCCACGGAGTTGCTGGCGTCTTGGAGAACCTTAGTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PIVSELIFFWERGAR*STELLASWRTLVQA Trigger: CGCCTGCACTAAGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTCAGACACGATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | GCGCTCAAGTACAGATGGACTGTTGCCTTTTGTCAGGCGGAGCCCTaGCAAATTACTGAAACTGGCCCTCTGGTCATCCAGACGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALKYRWTVAFCQAEP*QITETGPLVIQTAA Trigger: AGCCGCCGTCTGGATGACCAGAGGGCCAGTTTCAGTAATTTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTACTTGAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | TCAAAGAATCCTTCATCTCCAATCGTGTCTGAACTGATTTTCTTCTaGGAGCGTGGCGCGCGGTGGTCCACGGAGTTGCTGGCGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKNPSSPIVSELIFF*ERGARWSTELLASW Trigger: CCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTCAGACACGATTGGAGATGAAGGATTCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTTTAGCTTCCCCAAGTaGGTCTCCAATAGTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLFSFPK*VSNSPC Trigger: GCACGGACTATTGGAGACCAACTTGGGGAAGCTAAA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTGATTGTAGAGCGCTCTaGCTTCTCCCACCTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLDCRAL*LLPPCH Trigger: ATGACAAGGTGGGAGAAGCAAGAGCGCTCTACAATC...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 90 bp | GCCTTAGCAAGTCAAAGAATCCTTCATCTCCAATCGTGTCTGAACTaGTTTTCTTCTGGGAGCGTGGCGCGCGGTGGTCCACGGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALASQRILHLQSCLN*FSSGSVARGGPRSC Trigger: GCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTCAGACACGATTGGAGATGAAGGATTCTTTGACTTGCTAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTGTAAGCATTGCCCAGTaGGCTGTAAATAGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLVSIAQ*AVNSTE Trigger: CTCAGTGCTATTTACAGCCAACTGGGCAATGCTTAC...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTATCTCCGAACTCCTTaGCAATTAGGAGACGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLYLRTP*QLGDAA Trigger: AGCAGCGTCTCCTAATTGCAAAGGAGTTCGGAGATA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTGTCAGTTCACCACTTTaGTCCCCAACCTCTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLVSSPL*SPTSLE Trigger: TTCAAGAGAGGTTGGGGACAAAAGTGGTGAACTGAC...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTTGCCCTTCAGTCTGTaGACAAACAGGAGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLLPFSL*TNRSFA Trigger: TGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTCATCAGGCTCTTTCTaGTCATTTGTCATCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLSSGSF*SFVIRR Trigger: GCGCCTGATGACAAATGACAAGAAAGAGCCTGATGA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 90 bp | GGGACAGTCGGCCCCTTAGTGGCAGCAGATGGAGGAGCACATCTTTaGTCATCTAATCTTGACCCCTGGCACTTTACAAGGATGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTVGPLVAADGGAHL*SSNLDPWHFTRMSK Trigger: CTTCGACATCCTTGTAAAGTGCCAGGGGTCAAGATTAGATGATCAAAGATGTGCTCCTCCATCTGCTGCCACTAAGGGGCCGACTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTGCTCTTTCTTGTCATTaGTCATCAGGCGCTCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLALSCH*SSGAQV Trigger: TACTTGAGCGCCTGATGACAAATGACAAGAAAGAGC...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCATCTGTTTGGATCTCTTaGCAGCAGAACTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPSVWIS*QQNSLL Trigger: GAGCAGAGAGTTCTGCTGCAAAGAGATCCAAACAGA...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 90 bp | GGAATTATTTGTGCTGTAGCTCAGACCAAGAACCATCTGCAGGTCTaGGAGGTTCAGCCGCGCAGTCAGTTCACCACTTTTGTCCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GIICAVAQTKNHLQV*EVQPRSQFTTFVPN Trigger: GTTGGGGACAAAAGTGGTGAACTGACTGCGCGGCTGAACCTCTCAGACCTGCAGATGGTTCTTGGTCTGAGCTACAGCACAAATAATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | ACTCTCCTGTATCCTGCGGACCCGGGCAACCAAAGCTTTTCCCTTTaGCGTGATAGACATTTCCAAGATTGTAGAGCGCTCTTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLYPADPGNQSFSL*RDRHFQDCRALLLL Trigger: GAGAAGCAAGAGCGCTCTACAATCTTGGAAATGTCTATCACGCCAAAGGGAAAAGCTTTGGTTGCCCGGGTCCGCAGGATACAGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAAGCTTTGCAGATGGTTaGGCAATGAGAGGTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPSFADG*AMRGFC Trigger: ACAGAAACCTCTCATTGCCAAACCATCTGCAAAGCT...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTTTCAGCAAAATGCATaGCTTGGTCATGATTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLFQQNA*LGHDFP Trigger: TGGGAAATCATGACCAAGCAATGCATTTTGCTGAAA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCATGTCCCCAACCTCTCTaGAAATTTCCAAGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPCPQPL*KFPSAF Trigger: AAAAGCACTTGGAAATTTCAAGAGAGGTTGGGGACA...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCTACAGTGGCGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTTTTGATCATCTAATCTaGACCCCTGGCACTTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: TATVASSLQCPEGTSPFLFDHLI*TPGTLQ Trigger: TTGTAAAGTGCCAGGGGTCAAGATTAGATGATCAAA...AAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCGCCACTGTAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | CGAGCTCCCTGCAGTGTCCTGAGGGGACCAGTCCTTTTCTTCAGTAGGTTACCAACATCATGGAATTATTaGTGCTGTAGCTCAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAPCSVLRGPVLFFSRLPTSWNY*CCSSDQ Trigger: TTGGTCTGAGCTACAGCACAAATAATTCCATGATGT...TGGTAACCTACTGAAGAAAAGGACTGGTCCCCTCAGGACACTGCAGGGAGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | TTTAAGGTGTTTCCGAGATTGCCGCTGGCTTTAGCTTCCCCAAGTTaGTCTCCAATAGTCCGTGCAAGAGTTAAGTCATGGTGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FKVFPRLPLALASPS*SPIVRARVKSWWWY Trigger: ATACCACCACCATGACTTAACTCTTGCACGGACTATTGGAGACCAACTTGGGGAAGCTAAAGCCAGCGGCAATCTCGGAAACACCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CCA 90 bp | ATCAGGCTCTTTCTTGTCATTTGTCATCAGGCGCTCAAGTACAGATaGACTGTTGCCTTTTGTCAGGCGGAGCCCTGGCAAATTACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IRLFLVICHQALKYR*TVAFCQAEPWQITE Trigger: TTCAGTAATTTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGACAAGAAAGAGCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 90 bp | CAGTTTCCTTGTAAGTGGCACCTCTGGTCATCCATCCTGTTGCTCTaGAATCGCCTTAGCAAGTCAAAGAATCCTTCATCTCCAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QFPCKWHLWSSILLL*NRLSKSKNPSSPIV Trigger: CACGATTGGAGATGAAGGATTCTTTGACTTGCTAAGGCGATTTCAGAGCAACAGGATGGATGACCAGAGGTGCCACTTACAAGGAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 90 bp | AAGCAGTTTCGAATTCACCCAGGAATATGTATGCATTTCCTAGGTTaGTGTACGCTCTTCTCTCAGCCGCCTTATCTCCGAACTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQFRIHPGICMHFLG*CTLFSQPPYLRTPL Trigger: CAAAGGAGTTCGGAGATAAGGCGGCTGAGAGAAGAGCGTACAGCAACCTAGGAAATGCATACATATTCCTGGGTGAATTCGAAACTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 90 bp | TGCGACAGTTTCCTTGTAAGTGGCACCTCTGGTCATCCATCCTGTTaGTCTGAAATCGCCTTAGCAAGTCAAAGAATCCTTCATCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CDSFLVSGTSGHPSC*SEIALASQRILHLQ Trigger: TTGGAGATGAAGGATTCTTTGACTTGCTAAGGCGATTTCAGAGCAACAGGATGGATGACCAGAGGTGCCACTTACAAGGAAACTGTCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 90 bp | TCTCCCACCTTGTCATTAAGCTCTCTGGAGATATCCAGGTGTCGCTaGCAACACACTATCGCTTCATCAAAATTCCCAAGCACCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTLSLSSLEISRCR*QHTIASSKFPSTFK Trigger: CTTAAAGGTGCTTGGGAATTTTGATGAAGCGATAGTGTGTTGCCAGCGACACCTGGATATCTCCAGAGAGCTTAATGACAAGGTGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS-3UTR CAA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACAAGGTGTTTCCGAGATaGCCGCTGGCTTTAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YKKSLSTSSLKMASVRKDKVFPR*PLALAS Trigger: GGAAGCTAAAGCCAGCGGCAATCTCGGAAACACCTT...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | TACAAAAAGTCCCTGTCAACTAGCTCCTTAAAGATGGCCTCTGTAAGAAAAGACCTTGCTTCTCCCACCTaGTCATTAAGCTCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKKSLSTSSLKMASVRKDLASPT*SLSSLE Trigger: CTCCAGAGAGCTTAATGACAAGGTGGGAGAAGCAAG...GTCTTTTCTTACAGAGGCCATCTTTAAGGAGCTAGTTGACAGGGACTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 90 bp | AGCTGCCATCAATTTCAATGTTCTCAGACATCATGGAATTATTTGTaGTGTAGCTCAGACCAAGAACCATCTGCAGGTCTGAGAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCHQFQCSQTSWNYL*CSSDQEPSAGLRGS Trigger: TGAACCTCTCAGACCTGCAGATGGTTCTTGGTCTGAGCTACAGCACAAATAATTCCATGATGTCTGAGAACATTGAAATTGATGGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | GAGACAGAAGAATGTCAGTCCCTCAGTACTCAACATTCACACCCTAAAAATGTGCCGCTTTTGTACTTTTaGCCCTTCAGTCTGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ETEECQSLSTQHSHPKNVPLLYF*PFSLLT Trigger: TGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGG...CACATTTTTAGGGTGTGAATGTTGAGTACTGAGGGACTGACATTCTTCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS-3UTR CAA 90 bp | GCTTTCTTAGTGAATTTTCTTCTAAGTGTCTGCACCAAATGCGGGCCAGAAGATACTCACTGTCTCTGTTaGGATCTCTTTGCAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AFLVNFLLSVCTKCGPEDTHCLC*DLFAAE Trigger: TTCTGCTGCAAAGAGATCCAAACAGAGACAGTGAGT...ATCTTCTGGCCCGCATTTGGTGCAGACACTTAGAAGAAAATTCACTAAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 90 bp | GCTTTTGTACTTTTTGCCCTTCAGTCTGTTGACAAACAGGAGCTTTaGAGATGGTTTGGCAATGAGAGGTTTCTGTTTAGCGAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFVLFALQSVDKQEL*RWFGNERFLFSENF Trigger: GAAATTCTCGCTAAACAGAAACCTCTCATTGCCAAACCATCTGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | TTCTTCTGGGAGCGTGGCGCGCGGTGGTCCACGGAGTaGCTGGCGTCTTGGAGAACCTTAGTGCAGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FFWERGARWSTE*LASWRTLVQAL Trigger: CAGCGCCTGCACTAAGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | GAACTGATTTTCTTCTGGGAGCGTGGCGCGCGGTGGTCCACGGAGTaGCTGGCGTCTTGGAGAACCTTAGTGCAGGCGCTGCCGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ELIFFWERGARWSTE*LASWRTLVQALPLL Trigger: CAAAAGCGGCAGCGCCTGCACTAAGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | TCTGAACTGATTTTCTTCTGGGAGCGTGGCGCGCGGTaGTCCACGGAGTTGCTGGCGTCTTGGAGAACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SELIFFWERGAR*STELLASWRTL Trigger: TAAGGTTCTCCAAGACGCCAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | CCTTCATCTCCAATCGTGTCTGAACTGATTTTCTTCTaGGAGCGTGGCGCGCGGTGGTCCACGGAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSPIVSELIFF*ERGARWSTELL Trigger: CAGCAACTCCGTGGACCACCGCGCGCCACGCTCCCAGAAGAAAATCAGTTCAGACACGATTGGAGATGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 72 bp | CTCATCTGTGTTGGGGGACACCACAGAGACAGACGGTaGTTTCATCAACTTGGGGGTAGCAGAAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LICVGGHHRDRR*FHQLGGSRSSC Trigger: GCAGCTGCTTCTGCTACCCCCAAGTTGATGAAAGCACCGTCTGTCTCTGTGGTGTCCCCCAACACAGATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | GGGGACACCACAGAGACAGACGGTGCTTTCATCAACTaGGGGGTAGCAGAAGCAGCTGCTGTGGATGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDTTETDGAFIN*GVAEAAAVDVV Trigger: CACAACATCCACAGCAGCTGCTTCTGCTACCCCCAAGTTGATGAAAGCACCGTCTGTCTCTGTGGTGTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 72 bp | GCATTTCTCACGTCTTCTGGAAACTCTCCTGTATCCTaGGGACCCGGGCAACCAAAGCTTTTCCCTTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AFLTSSGNSPVS*GPGQPKLFPLA Trigger: CGCCAAAGGGAAAAGCTTTGGTTGCCCGGGTCCGCAGGATACAGGAGAGTTTCCAGAAGACGTGAGAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | TCTGTGTTGGGGGACACCACAGAGACAGACGGTGCTTTCATCAACTaGGGGGTAGCAGAAGCAGCTGCTGTGGATGTTGTGCGACAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SVLGDTTETDGAFIN*GVAEAAAVDVVRQF Trigger: AAACTGTCGCACAACATCCACAGCAGCTGCTTCTGCTACCCCCAAGTTGATGAAAGCACCGTCTGTCTCTGTGGTGTCCCCCAACACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | CGGCGGCTCTGTGAGCTAGCAAGAAGATCTAAGAACTCATCTGTGTaGGGGGACACCACAGAGACAGACGGTGCTTTCATCAACTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLCELARRSKNSSV*GDTTETDGAFINLG Trigger: CCCCAAGTTGATGAAAGCACCGTCTGTCTCTGTGGTGTCCCCCAACACAGATGAGTTCTTAGATCTTCTTGCTAGCTCACAGAGCCGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 72 bp | TGTGCTGTAGCTCAGACCAAGAACCATCTGCAGGTCTaGGAGGTTCAGCCGCGCAGTCAGTTCACCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CAVAQTKNHLQV*EVQPRSQFTTF Trigger: AAAAGTGGTGAACTGACTGCGCGGCTGAACCTCTCAGACCTGCAGATGGTTCTTGGTCTGAGCTACAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | TACAGATGGACTGTTGCCTTTTGTCAGGCGGAGCCCTaGCAAATTACTGAAACTGGCCCTCTGGTCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YRWTVAFCQAEP*QITETGPLVIQ Trigger: CTGGATGACCAGAGGGCCAGTTTCAGTAATTTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | GAGTTGCTGGCGTCTTGGAGAACCTTAGTGCAGGCGCTGCCGCTTTaGTACTTTTTGCCCTTCAGTCTGTTGACAAACAGGAGCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELLASWRTLVQALPL*YFLPFSLLTNRSFA Trigger: TGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAAGGTTCTCCAAGACGCCAGCAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | TATCCTGCGGACCCGGGCAACCAAAGCTTTTCCCTTTaGCGTGATAGACATTTCCAAGATTGTAGAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: YPADPGNQSFSL*RDRHFQDCRAL Trigger: GAGCGCTCTACAATCTTGGAAATGTCTATCACGCCAAAGGGAAAAGCTTTGGTTGCCCGGGTCCGCAGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | GTTCCAAGTTCTCCATACTGTGTCTCCGTCCCAGCTTaGCGCCTGCACCATGTAAGCTGCCATCAATTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VPSSPYCVSVPA*RLHHVSCHQFQ Trigger: TTGAAATTGATGGCAGCTTACATGGTGCAGGCGCCAAGCTGGGACGGAGACACAGTATGGAGAACTTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | GCGTCTTGGAGAACCTTAGTGCAGGCGCTGCCGCTTTaGTACTTTTTGCCCTTCAGTCTGTTGACAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASWRTLVQALPL*YFLPFSLLTNR Trigger: CCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAAGGTTCTCCAAGACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | GCGTCTTGGAGAACCTTAGTGCAGGCGCTGCCGCTTTTGTACTTTTaGCCCTTCAGTCTGTTGACAAACAGGAGCTTTGCAGATGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASWRTLVQALPLLYF*PFSLLTNRSFADGL Trigger: CAAACCATCTGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAAGGTTCTCCAAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 72 bp | GTCTCCGTCCCAGCTTGGCGCCTGCACCATGTAAGCTaGCATCAATTTCAATGTTCTCAGACATCATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSVPAWRLHHVS*HQFQCSQTSWN Trigger: ATTCCATGATGTCTGAGAACATTGAAATTGATGGCAGCTTACATGGTGCAGGCGCCAAGCTGGGACGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | TTTCCGAGATTGCCGCTGGCTTTAGCTTCCCCAAGTTaGTCTCCAATAGTCCGTGCAAGAGTTAAGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: FPRLPLALASPS*SPIVRARVKSW Trigger: CCATGACTTAACTCTTGCACGGACTATTGGAGACCAACTTGGGGAAGCTAAAGCCAGCGGCAATCTCGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CCA 72 bp | TTTCTTGTCATTTGTCATCAGGCGCTCAAGTACAGATaGACTGTTGCCTTTTGTCAGGCGGAGCCCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLVICHQALKYR*TVAFCQAEPWQ Trigger: TTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGACAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | TCATTTGTCATCAGGCGCTCAAGTACAGATGGACTGTaGCCTTTTGTCAGGCGGAGCCCTGGCAAATTACTG | + |
|
Preference number: 6 (lower is better) Translates to: SFVIRRSSTDGL*PFVRRSPGKLL Trigger: CAGTAATTTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | TCTTTCTTGTCATTTGTCATCAGGCGCTCAAGTACAGATGGACTGTaGCCTTTTGTCAGGCGGAGCCCTGGCAAATTACTGAAACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFLSFVIRRSSTDGL*PFVRRSPGKLLKLA Trigger: GGCCAGTTTCAGTAATTTGCCAGGGCTCCGCCTGACAAAAGGCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGACAAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 72 bp | CGAATTCACCCAGGAATATGTATGCATTTCCTAGGTTaGTGTACGCTCTTCTCTCAGCCGCCTTATCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RIHPGICMHFLG*CTLFSQPPYLR Trigger: TCGGAGATAAGGCGGCTGAGAGAAGAGCGTACAGCAACCTAGGAAATGCATACATATTCCTGGGTGAATTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | TCAAAATTCCCAAGCACCTTTAAGGTGTTTCCGAGATaGCCGCTGGCTTTAGCTTCCCCAAGTTGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SKFPSTFKVFPR*PLALASPSWSP Trigger: TGGAGACCAACTTGGGGAAGCTAAAGCCAGCGGCAATCTCGGAAACACCTTAAAGGTGCTTGGGAATTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CAA 72 bp | AGAACCTTAGTGCAGGCGCTGCCGCTTTTGTACTTTTaGCCCTTCAGTCTGTTGACAAACAGGAGCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTLVQALPLLYF*PFSLLTNRSFA Trigger: TGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAAGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | TGTGAGCTAGCAAGAAGATCTAAGAACTCATCTGTGTaGGGGGACACCACAGAGACAGACGGTGCTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CELARRSKNSSV*GDTTETDGAFI Trigger: GATGAAAGCACCGTCTGTCTCTGTGGTGTCCCCCAACACAGATGAGTTCTTAGATCTTCTTGCTAGCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | ATCGCTTCATCAAAATTCCCAAGCACCTTTAAGGTGTTTCCGAGATaGCCGCTGGCTTTAGCTTCCCCAAGTTGGTCTCCAATAGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: IASSKFPSTFKVFPR*PLALASPSWSPIVR Trigger: ACGGACTATTGGAGACCAACTTGGGGAAGCTAAAGCCAGCGGCAATCTCGGAAACACCTTAAAGGTGCTTGGGAATTTTGATGAAGCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CAA 90 bp | TTAGTGCAGGCGCTGCCGCTTTTGTACTTTTTGCCCTTCAGTCTGTaGACAAACAGGAGCTTTGCAGATGGTTTGGCAATGAGAGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVQALPLLYFLPFSL*TNRSFADGLAMRGF Trigger: GAAACCTCTCATTGCCAAACCATCTGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAAGTACAAAAGCGGCAGCGCCTGCACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | GAAGCAGTTTCGAATTCACCCAGGAATATGTATGCATTTCCTAGGTaGCTGTACGCTCTTCTCTCAGCCGCCTTATCTCCGAACTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EAVSNSPRNMYAFPR*LYALLSAALSPNSF Trigger: AAAGGAGTTCGGAGATAAGGCGGCTGAGAGAAGAGCGTACAGCAACCTAGGAAATGCATACATATTCCTGGGTGAATTCGAAACTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | AACTTCATAAGTTCCAAGTTCTCCATACTGTGTCTCCGTCCCAGCTaGGCGCCTGCACCATGTAAGCTGCCATCAATTTCAATGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NFISSKFSILCLRPS*APAPCKLPSISMFS Trigger: TGAGAACATTGAAATTGATGGCAGCTTACATGGTGCAGGCGCCAAGCTGGGACGGAGACACAGTATGGAGAACTTGGAACTTATGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS TCA 72 bp | TGTAAGTGGCACCTCTGGTCATCCATCCTGTTGCTCTaGAATCGCCTTAGCAAGTCAAAGAATCCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: CKWHLWSSILLL*NRLSKSKNPSS Trigger: AGATGAAGGATTCTTTGACTTGCTAAGGCGATTTCAGAGCAACAGGATGGATGACCAGAGGTGCCACTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CCA 72 bp | TTGTCATTAAGCTCTCTGGAGATATCCAGGTGTCGCTaGCAACACACTATCGCTTCATCAAAATTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSSLEISRCR*QHTIASSKFPS Trigger: GCTTGGGAATTTTGATGAAGCGATAGTGTGTTGCCAGCGACACCTGGATATCTCCAGAGAGCTTAATGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CCA 72 bp | CTTGGGCGATTGCTAAGTGCTTTAGGTGGTAATCGATaGCCTTCTCGTAGTCCTGAAGCAAAGTGTATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LGRLLSALGGNR*PSRSPEAKCMY Trigger: ATACATACACTTTGCTTCAGGACTACGAGAAGGCCATCGATTACCACCTAAAGCACTTAGCAATCGCCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | GGCGTAGTCATGCAAGTAGAAGTAAGCATTGCCCAGTaGGCTGTAAATAGCACTGAGTGTTTTGAGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GVVMQVEVSIAQ*AVNSTECFEVF Trigger: GAAGACCTCAAAACACTCAGTGCTATTTACAGCCAACTGGGCAATGCTTACTTCTACTTGCATGACTACGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029482.16 ENSMUST00000145558.2 |
||
| CDS CAA 72 bp | TGTCGAAGAAGTCTTCATCAGGCTCTTTCTTGTCATTaGTCATCAGGCGCTCAAGTACAGATGGACTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CRRSLHQALSCH*SSGAQVQMDCC Trigger: GCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGACAAGAAAGAGCCTGATGAAGACTTCTTCGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | GCAAAAGTTCCTTTAGTCCAAACTCACTGTCTCTGTTaGGATCTCTTTGCAGCAGAACTCTCTGCTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AKVPLVQTHCLC*DLFAAELSAHP Trigger: TGGATGAGCAGAGAGTTCTGCTGCAAAGAGATCCAAACAGAGACAGTGAGTTTGGACTAAAGGAACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | TTACAAGGATGTCGAAGAAGTCTTCATCAGGCTCTTTCTTGTCATTaGTCATCAGGCGCTCAAGTACAGATGGACTGTTGCCTTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQGCRRSLHQALSCH*SSGAQVQMDCCLLS Trigger: TGACAAAAGGCAACAGTCCATCTGTACTTGAGCGCCTGATGACAAATGACAAGAAAGAGCCTGATGAAGACTTCTTCGACATCCTTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 90 bp | TTTTTGCCCTTCAGTCTGTTGACAAACAGGAGCTTTGCAGATGGTTaGGCAATGAGAGGTTTCTGTTTAGCGAGAATTTCACTGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLPFSLLTNRSFADG*AMRGFCLARISLFQ Trigger: TTGGAACAGTGAAATTCTCGCTAAACAGAAACCTCTCATTGCCAAACCATCTGCAAAGCTCCTGTTTGTCAACAGACTGAAGGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS GCA 72 bp | CAATTTCAATGTTCTCAGACATCATGGAATTATTTGTaGTGTAGCTCAGACCAAGAACCATCTGCAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QFQCSQTSWNYL*CSSDQEPSAGL Trigger: CAGACCTGCAGATGGTTCTTGGTCTGAGCTACAGCACAAATAATTCCATGATGTCTGAGAACATTGAAATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | TTCAGTCTGTTGACAAACAGGAGCTTTGCAGATGGTTaGGCAATGAGAGGTTTCTGTTTAGCGAGAATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLLTNRSFADG*AMRGFCLARIS Trigger: TGAAATTCTCGCTAAACAGAAACCTCTCATTGCCAAACCATCTGCAAAGCTCCTGTTTGTCAACAGACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||
| CDS CAA 72 bp | CATCAATTTCAATGTTCTCAGACATCATGGAATTATTaGTGCTGTAGCTCAGACCAAGAACCATCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HQFQCSQTSWNY*CCSSDQEPSAG Trigger: ACCTGCAGATGGTTCTTGGTCTGAGCTACAGCACAAATAATTCCATGATGTCTGAGAACATTGAAATTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029482.16 |
||