Pregenerated sensors for GPSM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026930Ensembl transcript IDs: ENSMUST00000066889.13, ENSMUST00000066936.9, ENSMUST00000078616.12, ENSMUST00000114134.9, ENSMUST00000127453.2, ENSMUST00000145884.8
Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCAGGCCTGCAGGAAGCTGTGGAGATCCATGGGGACAGAAGCATaGCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GQACRKLWRSMGTEA*PPPYSSSSLHPPPG Trigger: CCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATGCTTCTGTCCCCATGGATCTCCACAGCTTCCTGCAGGCCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR TCA 90 bp | AGGGTTGGGCACAGCCAGGCCAGGATAGTGCCTGCCCTGGGGTCGTaGGGCAGATCAGAGTGTACCTCCTTCATAGCCATCCCAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: RVGHSQARIVPALGS*GRSECTSFIAIPGP Trigger: TGGTCCTGGGATGGCTATGAAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCCTGGCTGTGCCCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR GCA 90 bp | AATCTCCCTCAGCAGGGTTGGGCACAGCCAGGCCAGGATAGTGCCTaGCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: NLPQQGWAQPGQDSA*PGVVRQIRVYLLHS Trigger: GCTATGAAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR GCA 90 bp | ACTCCTAGTACAAGACCCTATGCTTGGAGACCTGCCTCTCCCCTCTaGCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: TPSTRPYAWRPASPL*QGQAPSFLKGQVQG Trigger: GCCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCTCCAAGCATAGGGTCTTGTACTAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR GCA 90 bp | GGCCACCATGTCCCGCCCGAGACCCTGTGCTCTAGTATCTGTTTCTaGTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAAGTTGGGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: GHHVPPETLCSSICF*SQSDVASPSQKLGP Trigger: AGGACCCAACTTCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGTCTCGGGCGGGACATGGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR TCA 90 bp | TGGGTAAAACAAAACAAATGTACCTCTCGGGTCAGAAAGGACCCATaGACAACATGGCAAACACATGTAAGCAATAAATACGCATGTACA | + |
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Preference number: 1 (lower is better) Translates to: WVKQNKCTSRVRKDP*TTWQTHVSNKYACT Trigger: TGTACATGCGTATTTATTGCTTACATGTGTTTGCCATGTTGTTCATGGGTCCTTTCTGACCCGAGAGGTACATTTGTTTTGTTTTACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGGAAGGGGCTGGGGCTaGGCTGGCTGTCCATCATGG | + |
|
Preference number: 2 (lower is better) Translates to: APLGALGELAEFHIWQGRGRGWG*AGCPSW Trigger: CCATGATGGACAGCCAGCTCAGCCCCAGCCCCTTCC...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGGAAGGGGCTGGGGCTaGGCTGGCTGTCCATCATGG | + |
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Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLGRGWG*AGCPSW Trigger: CCATGATGGACAGCCAGCTCAGCCCCAGCCCCTTCC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCTCCCTCAGCAGGGTTaGGCACAGCCAGGCCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLLPQQG*AQPGQD Trigger: ATCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGGAAGGGGCTGGGGCTaGGCTGGCTGTCCATCATGG | + |
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Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVGRGWG*AGCPSW Trigger: CCATGATGGACAGCCAGCTCAGCCCCAGCCCCTTCC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGGGAAGGGGCTGGGGCTaGGCTGGCTGTCCATCATGG | + |
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Preference number: 2 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKGRGWG*AGCPSW Trigger: CCATGATGGACAGCCAGCTCAGCCCCAGCCCCTTCC...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCCCGGCAGTTCTGGCTaGGTCTCCACCCCAACTACA | + |
|
Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLPGSSG*VSTPTT Trigger: TGTAGTTGGGGTGGAGACTCAGCCAGAACTGCCGGG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGAGGGCAGGGCAGGCCTaGAGGAAGCTGTGGAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQRAGQA*RKLWRS Trigger: GGATCTCCACAGCTTCCTGCAGGCCTGCCCTGCCCT...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGGCCAGGATAGTGCCTaGCCTGGGGTCGTGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVGQDSA*PGVVRQ Trigger: CTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGGCCAGGATAGTGCCTaGCCTGGGGTCGTGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSPLPGASSIFPQRPSARGQDSA*PGVVRQ Trigger: CTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGGGCTGGGGCTGAGCTaGCTGTCCATCATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLGLGLS*LSIMAL Trigger: CAAGGCCATGATGGACAGCCAGCTCAGCCCCAGCCC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCTCCTTGAAGCCCCTCTaGGGGCCTTGGGAGAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLSLKPL*GPWESW Trigger: CCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGA...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCTCCCTCAGCAGGGTTaGGCACAGCCAGGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQLPQQG*AQPGQD Trigger: ATCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCATGCCCCGGCAGTTCTaGCTGAGTCTCCACCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLMPRQF*LSLHPN Trigger: GTTGGGGTGGAGACTCAGCCAGAACTGCCGGGGCAT...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGGCAGGGCAGGCCTaGAGGAAGCTGTGGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKRAGQA*RKLWRS Trigger: GGATCTCCACAGCTTCCTGCAGGCCTGCCCTGCCCT...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAAGGGCAGGGCAGGCCTaGAGGAAGCTGTGGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: GCLDFVAANLPQQGWAQPRAGQA*RKLWRS Trigger: GGATCTCCACAGCTTCCTGCAGGCCTGCCCTGCCCT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTAGGGCAGGGCAGGCCTaGAGGAAGCTGTGGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVRAGQA*RKLWRS Trigger: GGATCTCCACAGCTTCCTGCAGGCCTGCCCTGCCCT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGGGCTGGGGCTGAGCTaGCTGTCCATCATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LSPLPGASSIFPQRPSARGLGLS*LSIMAL Trigger: CAAGGCCATGATGGACAGCCAGCTCAGCCCCAGCCC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCACCATCTGGCTCAGTaGGAAGGGGCTGGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVHHLAQ*EGAGAE Trigger: CTCAGCCCCAGCCCCTTCCCACTGAGCCAGATGGTG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACACCATCTGGCTCAGTaGGAAGGGGCTGGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RPASPLCQGQAPSFLKGQHHLAQ*EGAGAE Trigger: CTCAGCCCCAGCCCCTTCCCACTGAGCCAGATGGTG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCCCCTCTGGGGGCCTTaGGAGAGTTGGCAGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLPLWGP*ESWQSF Trigger: GAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTCCTTGAAGCCCCTCTaGGGGCCTTGGGAGAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQSLKPL*GPWESW Trigger: CCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACTCCCTCAGCAGGGTTaGGCACAGCCAGGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: RPASPLCQGQAPSFLKGQLPQQG*AQPGQD Trigger: ATCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGATGCCCCGGCAGTTCTaGCTGAGTCTCCACCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQMPRQF*LSLHPN Trigger: GTTGGGGTGGAGACTCAGCCAGAACTGCCGGGGCAT...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTGGCAGGGCAGGGCTTaGGGGAAAAGACTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQWQGRA*GKRLWT Trigger: TGTCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTACCAGAAGAAGTCCTTaGAGCCCCTCTGGGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLTRRSP*SPSGGL Trigger: AAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGT...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGACCAGAAGAAGTCCTTaGAGCCCCTCTGGGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQTRRSP*SPSGGL Trigger: AAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGT...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGCCCGGCAGTTCTGGCTaGGTCTCCACCCCAACTACA | + |
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Preference number: 2 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKPGSSG*VSTPTT Trigger: TGTAGTTGGGGTGGAGACTCAGCCAGAACTGCCGGG...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGAGGGCAGGGCAGGCCTaGAGGAAGCTGTGGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: LEAPLGALGELAEFHIWQRAGQA*RKLWRS Trigger: GGATCTCCACAGCTTCCTGCAGGCCTGCCCTGCCCT...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGGCTGGGGCTGAGCTaGCTGTCCATCATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LEAPLGALGELAEFHIWQGLGLS*LSIMAL Trigger: CAAGGCCATGATGGACAGCCAGCTCAGCCCCAGCCC...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGCACCATCTGGCTCAGTaGGAAGGGGCTGGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LLHSHPRTSWGTEDALALHHLAQ*EGAGAE Trigger: CTCAGCCCCAGCCCCTTCCCACTGAGCCAGATGGTG...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCGCCTGCAGGAAGCTGTaGAGATCCATGGGGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLACRKL*RSMGTE Trigger: TTCTGTCCCCATGGATCTCCACAGCTTCCTGCAGGC...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCCCCTCTGGGGGCCTTaGGAGAGTTGGCAGAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVPLWGP*ESWQSF Trigger: GAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTACCAGAAGAAGTCCTTaGAGCCCCTCTGGGGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVTRRSP*SPSGGL Trigger: AAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGACCAGAAGAAGTCCTTaGAGCCCCTCTGGGGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSPLPGASSIFPQRPSARTRRSP*SPSGGL Trigger: AAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGT...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGACCAGAAGAAGTCCTTaGAGCCCCTCTGGGGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKTRRSP*SPSGGL Trigger: AAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGT...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGCCTGCAGGAAGCTGTaGAGATCCATGGGGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLACRKL*RSMGTE Trigger: TTCTGTCCCCATGGATCTCCACAGCTTCCTGCAGGC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGGAAGGGTCTGTCTCATaGATGCCCCGGCAGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKEGSVS*MPRQFW Trigger: CCAGAACTGCCGGGGCATCCATGAGACAGACCCTTC...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCTCCCTCTCAGAAGTTaGGTCCTCAGTTTCCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: CTFKYAGRPPCPARDPVLLPLRS*VLSFPC Trigger: GCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAGGAAGGGGCTGGGGCTaGGCTGGCTGTCCATCATGG | + |
|
Preference number: 2 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGGRGWG*AGCPSW Trigger: CCATGATGGACAGCCAGCTCAGCCCCAGCCCCTTCC...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGTGGCAGGGCAGGGCTTaGGGGAAAAGACTCTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: LLHSHPRTSWGTEDALALWQGRA*GKRLWT Trigger: TGTCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCA...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGACCTGCCTCTCCCCTCTaGCAGGGGCAAGCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARPASPL*QGQAPS Trigger: AGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGG...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGCTGGCTGTCCATCATaGCCTTGGGAAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GQDSACPGVVRQIRVYLLAGCPS*PWEDLA Trigger: AGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGGGCTGGGGCTGAGCTaGCTGTCCATCATGGCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARGLGLS*LSIMAL Trigger: CAAGGCCATGATGGACAGCCAGCTCAGCCCCAGCCC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGCCTGCAGGAAGCTGTaGAGATCCATGGGGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVACRKL*RSMGTE Trigger: TTCTGTCCCCATGGATCTCCACAGCTTCCTGCAGGC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGCCTGCAGGAAGCTGTaGAGATCCATGGGGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WGPWESWQSFTFGRAGLEACRKL*RSMGTE Trigger: TTCTGTCCCCATGGATCTCCACAGCTTCCTGCAGGC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCATCCCAGGACCAGCTaGGGGACAGAAGATGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVHPRTS*GTEDAL Trigger: TAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTGTCCATCATGGCCTTaGGAAGATTTGGCTTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: HALPHIAALACTHHLGWGCPSWP*EDLAYW Trigger: CCAATAAGCCAAATCTTCCCAAGGCCATGATGGACA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGCTGGCTGTCCATCATaGCCTTGGGAAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RPASPLCQGQAPSFLKGQAGCPS*PWEDLA Trigger: AGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGCTGGCTGTCCATCATaGCCTTGGGAAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVAGCPS*PWEDLA Trigger: AGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGACACCATCTGGCTCAGTaGGAAGGGGCTGGGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGHHLAQ*EGAGAE Trigger: CTCAGCCCCAGCCCCTTCCCACTGAGCCAGATGGTG...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATCCTTGAAGCCCCTCTaGGGGCCTTGGGAGAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARSLKPL*GPWESW Trigger: CCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCCTGCCTCTCCCCTCTaGCAGGGGCAAGCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSPASPL*QGQAPS Trigger: AGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGG...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGGAAGATTTGGCTTATTaGGGGATCATGGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQEDLAY*GIMATV Trigger: CACAGTGGCCATGATCCCCCAATAAGCCAAATCTTC...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCCACCATCTGGCTCAGTaGGAAGGGGCTGGGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSNKYACTFKYAGRPPCPHHLAQ*EGAGAE Trigger: CTCAGCCCCAGCCCCTTCCCACTGAGCCAGATGGTG...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGAAGGGTCTGTCTCATaGATGCCCCGGCAGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPAREGSVS*MPRQFW Trigger: CCAGAACTGCCGGGGCATCCATGAGACAGACCCTTC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGAAGATTTGGCTTATTaGGGGATCATGGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GCLDFVAANLPQQGWAQPEDLAY*GIMATV Trigger: CACAGTGGCCATGATCCCCCAATAAGCCAAATCTTC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGAAGATTTGGCTTATTaGGGGATCATGGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSPLPGASSIFPQRPSAREDLAY*GIMATV Trigger: CACAGTGGCCATGATCCCCCAATAAGCCAAATCTTC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTATATGGACCCCTCCTTaGGGAGAAAGCCAAGATATC | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVIWTPP*GESQDI Trigger: GATATCTTGGCTTTCTCCCCAAGGAGGGGTCCATAT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCTTGCCCTGGCCCTCTaGGTAAGAGGCCCTGGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSLALAL*VRGPGL Trigger: TAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAG...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTGTCCTCAGTTTCCCTTaGCCTGGCCCTCTGGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSVLSFP*PGPLGK Trigger: CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGCTGGCTGTCCATCATaGCCTTGGGAAGATTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARAGCPS*PWEDLA Trigger: AGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGACTTGCCCTGGCCCTCTaGGTAAGAGGCCCTGGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: CALVSVSALRVMLPLPLRLALAL*VRGPGL Trigger: TAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAG...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGACTCCCTCTCAGAAGTTaGGTCCTCAGTTTCCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARLPLRS*VLSFPC Trigger: GCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGATGGCAGGGCAGGGCTTaGGGGAAAAGACTCTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: CALVSVSALRVMLPLPLRWQGRA*GKRLWT Trigger: TGTCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCA...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTTCCTCAAAGGCCAAGTaGAAGGCTGGGGACTACCAG | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSSSKAK*KAGDYQ Trigger: CTGGTAGTCCCCAGCCTTGCACTTGGCCTTTGAGGA...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAGTCCTCAGTTTCCCTTaGCCTGGCCCTCTGGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: CALVSVSALRVMLPLPLRVLSFP*PGPLGK Trigger: CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCATCCCAGGACCAGCTaGGGGACAGAAGATGCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSHPRTS*GTEDAL Trigger: TAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATG...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGTAATAGAAGGTAGATaGTCACTAAGAGGACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QELGPRSRRVCLMDAPAVVIEGR*SLRGLK Trigger: CTTCAGTCCTCTTAGTGAGCATCTACCTTCTATTAC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGAAGATTTGGCTTATTaGGGGATCATGGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPAREDLAY*GIMATV Trigger: CACAGTGGCCATGATCCCCCAATAAGCCAAATCTTC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTGGGCCTTGGGAGAGTTaGCAGAGTTTCACATTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSGPWES*QSFTFG Trigger: GCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCC...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAATATGGACCCCTCCTTaGGGAGAAAGCCAAGATATC | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARIWTPP*GESQDI Trigger: GATATCTTGGCTTTCTCCCCAAGGAGGGGTCCATAT...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTATATGGACCCCTCCTTaGGGAGAAAGCCAAGATATC | + |
|
Preference number: 2 (lower is better) Translates to: TLCSSICFCSQSDVASPSIWTPP*GESQDI Trigger: GATATCTTGGCTTTCTCCCCAAGGAGGGGTCCATAT...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGTAATAGAAGGTAGATaGTCACTAAGAGGACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NKYACTFKYAGRPPCPARVIEGR*SLRGLK Trigger: CTTCAGTCCTCTTAGTGAGCATCTACCTTCTATTAC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGTAATAGAAGGTAGATaGTCACTAAGAGGACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSNKYACTFKYAGRPPCPVIEGR*SLRGLK Trigger: CTTCAGTCCTCTTAGTGAGCATCTACCTTCTATTAC...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR TCA 72 bp | GACTCTGGACAGCACCGGGGCTCGGGGCCAACATGCTaGAGGCCCGGCCTAGGGCAGGGCAGGGCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSGQHRGSGPTC*RPGLGQGRAGL Trigger: CAGGCCTGCCCTGCCCTGCCCTAGGCCGGGCCTTCAGCATGTTGGCCCCGAGCCCCGGTGCTGTCCAGAGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCTCTCCCTCAGCAGGGTaGGGCACAGCCAGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CTFKYAGRPPCPARDPVLSPSAG*GTARPG Trigger: TCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAGA...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR GCA 72 bp | CAGCAGGGTTGGGCACAGCCAGGCCAGGATAGTGCCTaGCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: QQGWAQPGQDSA*PGVVRQIRVYL Trigger: GAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCCTGGCTGTGCCCAACCCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGTCTCCCTCAGCAGGGTaGGGCACAGCCAGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSPLPGASSIFPQRPSARSPSAG*GTARPG Trigger: TCCTGGCCTGGCTGTGCCCAACCCTGCTGAGGGAGA...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGCCCCTCTGGGGGCCTaGGGAGAGTTGGCAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GCLDFVAANLPQQGWAQPAPLGA*GELAEF Trigger: AAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CCA 72 bp | CCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCTaGCTGAGTCTCCACCCCAACTACAGTGCCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PEGSVSWMPRQF*LSLHPNYSALC Trigger: ACACAGGGCACTGTAGTTGGGGTGGAGACTCAGCCAGAACTGCCGGGGCATCCATGAGACAGACCCTTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGCCCCTCTGGGGGCCTaGGGAGAGTTGGCAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLHSHPRTSWGTEDALALAPLGA*GELAEF Trigger: AAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR GCA 72 bp | GCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTaGAAGGCTGGGGACTACCAGGTCAGGGTGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARGKLHLSSKAK*KAGDYQVRVSG Trigger: TCCAGACACCCTGACCTGGTAGTCCCCAGCCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CCA 72 bp | CCAGAGCTCAGCACTCCTAGTACAAGACCCTATGCTTaGAGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PELSTPSTRPYA*RPASPLCQGQA Trigger: AGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCTCCAAGCATAGGGTCTTGTACTAGGAGTGCTGAGCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGGCAGAGTTTCACATTaGGCAGGGCAGGGCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPASPLCQGQAPSFLKGQGRVSH*AGQGLR Trigger: CCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCC...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGGGGCCTTGGGAGAGTaGGCAGAGTTTCACATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPASPLCQGQAPSFLKGQGALGE*AEFHIW Trigger: CCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCC...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGGGGCCTTGGGAGAGTaGGCAGAGTTTCACATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GCLDFVAANLPQQGWAQPGALGE*AEFHIW Trigger: CCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGCCCCTCTGGGGGCCTaGGGAGAGTTGGCAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: NKYACTFKYAGRPPCPARAPLGA*GELAEF Trigger: AAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGTACAAGACCCTATGCTaGGAGACCTGCCTCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKYKTLC*ETCLSP Trigger: AGGGGAGAGGCAGGTCTCCAAGCATAGGGTCTTGTA...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR TCA 72 bp | AAGGGTCTGTCTCATGGATGCCCCGGCAGTTCTGGCTaGGTCTCCACCCCAACTACAGTGCCCTGTGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KGLSHGCPGSSG*VSTPTTVPCVQ Trigger: TTGGACACAGGGCACTGTAGTTGGGGTGGAGACTCAGCCAGAACTGCCGGGGCATCCATGAGACAGACCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CCA 72 bp | AAGTCCTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTaGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSLKPLWGPWES*QSFTFGRAGLE Trigger: CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CCA 72 bp | GCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAAGTTaGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ALRVMLPLPLRS*VLSFPCPGPLG Trigger: ACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAGAGGCAACATCACTCTGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR GCA 72 bp | ACAAGACCCTATGCTTGGAGACCTGCCTCTCCCCTCTaGCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TRPYAWRPASPL*QGQAPSFLKGQ Trigger: TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCTCCAAGCATAGGGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CCA 72 bp | CACCAGAAGAAGTCCTTGAAGCCCCTCTGGGGGCCTTaGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HQKKSLKPLWGP*ESWQSFTFGRA Trigger: TGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCTGTCCATCATGGCCTaGGGAAGATTTGGCTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: GQDSACPGVVRQIRVYLLLSIMA*GRFGLL Trigger: CAATAAGCCAAATCTTCCCAAGGCCATGATGGACAG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTGCCCCTCTGGGGGCCTaGGGAGAGTTGGCAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TLCSSICFCSQSDVASPSAPLGA*GELAEF Trigger: AAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR GCA 72 bp | GTCCCGCCCGAGACCCTGTGCTCTAGTATCTGTTTCTaGTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPPETLCSSICF*SQSDVASPSQK Trigger: CTTCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGTCTCGGGCGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGCTGTCCATCATGGCCTaGGGAAGATTTGGCTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKLSIMA*GRFGLL Trigger: CAATAAGCCAAATCTTCCCAAGGCCATGATGGACAG...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCTGTCCATCATGGCCTaGGGAAGATTTGGCTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: WGPWESWQSFTFGRAGLELSIMA*GRFGLL Trigger: CAATAAGCCAAATCTTCCCAAGGCCATGATGGACAG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGGGGCCTTGGGAGAGTaGGCAGAGTTTCACATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NKYACTFKYAGRPPCPARGALGE*AEFHIW Trigger: CCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCC...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCTACAAGACCCTATGCTaGGAGACCTGCCTCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSNKYACTFKYAGRPPCPYKTLC*ETCLSP Trigger: AGGGGAGAGGCAGGTCTCCAAGCATAGGGTCTTGTA...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGACTGTCCATCATGGCCTaGGGAAGATTTGGCTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: NKYACTFKYAGRPPCPARLSIMA*GRFGLL Trigger: CAATAAGCCAAATCTTCCCAAGGCCATGATGGACAG...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR TCA 72 bp | CAAAACAAATGTACCTCTCGGGTCAGAAAGGACCCATaGACAACATGGCAAACACATGTAAGCAATAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: QNKCTSRVRKDP*TTWQTHVSNKY Trigger: GTATTTATTGCTTACATGTGTTTGCCATGTTGTTCATGGGTCCTTTCTGACCCGAGAGGTACATTTGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTCATCCCCCGGCTCCTaGGCGTCCCCGTCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGSSPGS*ASPSPR Trigger: CCGAGGCGACGGGGACGCCCAGGAGCCGGGGGATGA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLPQAPA*SALSHP Trigger: AGGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCACGGGCAGCAGCAATaGGCGAGGGCGAGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLHGQQQ*ARARGT Trigger: GGTGCCCCTCGCCCTCGCCCATTGCTGCTGCCCGTG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066889.13 |
||
| CDS-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLLADIR*QVPGVL Trigger: CAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGCGGATGGGGCAGCTGTaGCCTCAGCAGCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRRMGQL*PQQPQP Trigger: AGGCTGGGGCTGCTGAGGCCACAGCTGCCCCATCCG...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGCCTACGCTAGCCCTCTaGTCGTCCAGCCGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRPTLAL*SSSRRL Trigger: GAGCCGCCGGCTGGACGACCAGAGGGCTAGCGTAGG...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGTCATCCCCCGGCTCCTaGGCGTCCCCGTCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLESSPGS*ASPSPR Trigger: CCGAGGCGACGGGGACGCCCAGGAGCCGGGGGATGA...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR TCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCTGTCCAGTGGAGAGTaGCTACCCTCCCGGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGLSSGE*LPSRGL Trigger: GAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLPQAPA*SALSHP Trigger: AGGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGGGGGAAGCGAGTCCCTaGCTGGACCCCTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQGEASP*LDPSSP Trigger: GGGACTGGAGGGGTCCAGGCAGGGACTCGCTTCCCC...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGPSPRR*PTLLRV Trigger: CACCCTCAACAATGTGGGGCACCTCCGAGGCGACGG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCGGATGGGGCAGCTGTaGCCTCAGCAGCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLRMGQL*PQQPQP Trigger: AGGCTGGGGCTGCTGAGGCCACAGCTGCCCCATCCG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGTCATCCCCCGGCTCCTaGGCGTCCCCGTCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQSSPGS*ASPSPR Trigger: CCGAGGCGACGGGGACGCCCAGGAGCCGGGGGATGA...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGGGGQR*SSILED Trigger: GTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCC...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 64% GC, longest homopolymer 10 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLPSPRR*PTLLRV Trigger: CACCCTCAACAATGTGGGGCACCTCCGAGGCGACGG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCACTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPLADIR*QVPGVL Trigger: CAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAG...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGACTAGGTGCCGCAGGTaGTACTCAGCAGCACGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGTRCRR*YSAARS Trigger: CGAGCGTGCTGCTGAGTACCACCTGCGGCACCTAGT...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTCCAGGGGACAGCGCTaGTCATCCATGCGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGSRGQR*SSMRLL Trigger: GAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTCTATCCTCCACGGATaGGGCAGCTGTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGSILHG*GSCGLS Trigger: GCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACCTACGCTAGCCCTCTaGTCGTCCAGCCGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQPTLAL*SSSRRL Trigger: GAGCCGCCGGCTGGACGACCAGAGGGCTAGCGTAGG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCACCTACGCTAGCCCTCTaGTCGTCCAGCCGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPPTLAL*SSSRRL Trigger: GAGCCGCCGGCTGGACGACCAGAGGGCTAGCGTAGG...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCGGTGGACACTGCTGCTaGGGATCAGGCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLGGHCC*GSGSPL Trigger: CAGTGGGCTGCCTGATCCCCAGCAGCAGTGTCCACC...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGGGGAAGCGAGTCCCTaGCTGGACCCCTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHSHPRTSWGTEDALALGEASP*LDPSSP Trigger: GGGACTGGAGGGGTCCAGGCAGGGACTCGCTTCCCC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQPSPRR*PTLLRV Trigger: CACCCTCAACAATGTGGGGCACCTCCGAGGCGACGG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCCCGGTGGACACTGCTaGTGGGGATCAGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVPGGHC*WGSGSP Trigger: TGGGCTGCCTGATCCCCAGCAGCAGTGTCCACCGGG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGCCCGGTGGACACTGCTaGTGGGGATCAGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKPGGHC*WGSGSP Trigger: TGGGCTGCCTGATCCCCAGCAGCAGTGTCCACCGGG...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARPQAPA*SALSHL Trigger: AAGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGG...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQLADIR*QVPGVL Trigger: CAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCAGTCCCCTGTGTGGTaGGTCTCTCCATTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGQSPVW*VSPFCS Trigger: GGAGCAGAATGGAGAGACCCACCACACAGGGGACTG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCGGATGGGGCAGCTGTaGCCTCAGCAGCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQRMGQL*PQQPQP Trigger: AGGCTGGGGCTGCTGAGGCCACAGCTGCCCCATCCG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGTCTATCCTCCACGGATaGGGCAGCTGTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRSILHG*GSCGLS Trigger: GCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGA...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTTCCAGCCGGCGGCTCTaGGAGCTGGCAATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLSSRRL*ELAMRS Trigger: TGACCTCATTGCCAGCTCCCAGAGCCGCCGGCTGGA...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCCTACGCTAGCCCTCTaGTCGTCCAGCCGGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQPTLAL*SSSRRL Trigger: GAGCCGCCGGCTGGACGACCAGAGGGCTAGCGTAGG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATCATCCCCCGGCTCCTaGGCGTCCCCGTCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARSSPGS*ASPSPR Trigger: CCGAGGCGACGGGGACGCCCAGGAGCCGGGGGATGA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLGGGQR*SSILED Trigger: GTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQGGGQR*SSILED Trigger: GTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCC...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGGTGGACACTGCTGCTaGGGATCAGGCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLGGHCC*GSGSPL Trigger: CAGTGGGCTGCCTGATCCCCAGCAGCAGTGTCCACC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGTTAGCTGGCACCCGGTaGACACTGCTGCTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRLAGTR*TLLLGI Trigger: GATCCCCAGCAGCAGTGTCCACCGGGTGCCAGCTAA...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR TCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCTGTCCAGTGGAGAGTaGCTACCCTCCCGGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVLSSGE*LPSRGL Trigger: GAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCACTGTCCAGTGGAGAGTaGCTACCCTCCCGGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPLSSGE*LPSRGL Trigger: GAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAG...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCCTTGGCCTCCCCCATaGGGTCACCAATGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEPWPPP*GHQWSV Trigger: CACGGACCATTGGTGACCGCATGGGGGAGGCCAAGG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCGGCCCAGGGCCAGCTaGAGGTGGGCAATATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQRPRAS*RWAIFM Trigger: CATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCGGGGAAGCGAGTCCCTaGCTGGACCCCTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAGEASP*LDPSSP Trigger: GGGACTGGAGGGGTCCAGGCAGGGACTCGCTTCCCC...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGCCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKPSPRR*PTLLRV Trigger: CACCCTCAACAATGTGGGGCACCTCCGAGGCGACGG...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCTCAGACTCTCAGAGTaGTGGCCTGCCTTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGLRLSE*WPAFSN Trigger: GTTGCTGAAGGCAGGCCAGCACTCTGAGAGTCTGAG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114134.9 |
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| CDS-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCCTATCAGCCAGCTCCTaGGCAATGACTAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLLSASS*AMTRCR Trigger: GCGGCACCTAGTCATTGCCCAGGAGCTGGCTGATAG...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLRASCR*AIFMRA Trigger: AGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCT...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCCGGATGGGGCAGCTGTaGCCTCAGCAGCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMARMGQL*PQQPQP Trigger: AGGCTGGGGCTGCTGAGGCCACAGCTGCCCCATCCG...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTCCAGCCGGCGGCTCTaGGAGCTGGCAATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVSSRRL*ELAMRS Trigger: TGACCTCATTGCCAGCTCCCAGAGCCGCCGGCTGGA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATCATCCCCCGGCTCCTaGGCGTCCCCGTCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGSSPGS*ASPSPR Trigger: CCGAGGCGACGGGGACGCCCAGGAGCCGGGGGATGA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEGGGQR*SSILED Trigger: GTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGTGGACACTGCTGCTaGGGATCAGGCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEGGHCC*GSGSPL Trigger: CAGTGGGCTGCCTGATCCCCAGCAGCAGTGTCCACC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGGTGGACACTGCTGCTaGGGATCAGGCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPGGHCC*GSGSPL Trigger: CAGTGGGCTGCCTGATCCCCAGCAGCAGTGTCCACC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGGTGGACACTGCTGCTaGGGATCAGGCAGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQGGHCC*GSGSPL Trigger: CAGTGGGCTGCCTGATCCCCAGCAGCAGTGTCCACC...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTTAGCTGGCACCCGGTaGACACTGCTGCTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQLAGTR*TLLLGI Trigger: GATCCCCAGCAGCAGTGTCCACCGGGTGCCAGCTAA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGCACACAGCCTTCTCTaGCAAGCTCAGGGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARAHSLL*QAQGQR Trigger: CCTCTGGCCCTGAGCTTGGCAGAGAAGGCTGTGTGC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066889.13 |
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| CDS-3UTR GCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGTCCTCAGTGCCCACCTaGACAGCAGCCTCGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRSSVPT*TAASKK Trigger: TTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGAGGA...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCCTTGGCCTCCCCCATaGGGTCACCAATGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQPWPPP*GHQWSV Trigger: CACGGACCATTGGTGACCGCATGGGGGAGGCCAAGG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGCCCTCCGCTCAGCTaGCTTGTCCCCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEGPPLS*LVPKLL Trigger: AAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGGGCCCTCCGCTCAGCTaGCTTGTCCCCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKGPPLS*LVPKLL Trigger: AAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCC...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGAGAAGATGTGAGCATTaGCCAGGTTGCTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGRRCEH*PGCCRP Trigger: GGGCCTACAGCAACCTGGGCAATGCTCACATCTTCT...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCTGGGCAATGACTAGGTaGCGCAGGTGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLWAMTR*RRWYSA Trigger: TGCTGAGTACCACCTGCGGCACCTAGTCATTGCCCA...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGACCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARPQAPA*SALSHP Trigger: AGGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGG...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCGGCCCAGGGCCAGCTaGAGGTGGGCAATATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLERPRAS*RWAIFM Trigger: CATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCGGCCCAGGGCCAGCTaGAGGTGGGCAATATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVRPRAS*RWAIFM Trigger: CATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR GCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCCCCGGTGGACACTGCTaGTGGGGATCAGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAPGGHC*WGSGSP Trigger: TGGGCTGCCTGATCCCCAGCAGCAGTGTCCACCGGG...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAACTAGGTGCCGCAGGTaGTACTCAGCAGCACGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPTRCRR*YSAARS Trigger: CGAGCGTGCTGCTGAGTACCACCTGCGGCACCTAGT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCTATCAGCCAGCTCCTaGGCAATGACTAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQLSASS*AMTRCR Trigger: GCGGCACCTAGTCATTGCCCAGGAGCTGGCTGATAG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCTCCAGTCCCCTGTGTaGTGGGTCTCTCCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLLQSPV*WVSPFC Trigger: GCAGAATGGAGAGACCCACCACACAGGGGACTGGAG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAACTTCCTGCTCCTCATaGGGAGGGGAAGCGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPTSCSS*GGEASP Trigger: GGGACTCGCTTCCCCTCCCCATGAGGAGCAGGAAGT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCATCCAGGGGACAGCGCTaGTCATCCATGCGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPSRGQR*SSMRLL Trigger: GAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAATCTATCCTCCACGGATaGGGCAGCTGTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQSILHG*GSCGLS Trigger: GCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGA...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGATCAGGCAGCCCACTaGCCTCTTGCTCTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPDQAAH*PLALDS Trigger: GGAGTCCAGAGCAAGAGGCCAGTGGGCTGCCTGATC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGATCAGGCAGCCCACTaGCCTCTTGCTCTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARDQAAH*PLALDS Trigger: GGAGTCCAGAGCAAGAGGCCAGTGGGCTGCCTGATC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGCGCCCCAAGAAGATGTaGGCATTGCCCAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARRPKKM*ALPRLL Trigger: CAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCG...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR TCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCGCCCCAAGAAGATGTaGGCATTGCCCAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLERPKKM*ALPRLL Trigger: CAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCCCAGCTCCTGGGCAATaGCTAGGTGCCGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAPAPGQ*LGAAGG Trigger: ACCACCTGCGGCACCTAGTCATTGCCCAGGAGCTGG...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCACCATATACCACCTTaGACACAGCCTTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGHHIPP*TQPSLP Trigger: TGGCAGAGAAGGCTGTGTGCAAGGTGGTATATGGTG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066889.13 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGGAAGAAAGCCACACCTaGCTTGAAGTCCCCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQEESHT*LEVPRL Trigger: AAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTC...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAAAGGTCAAGGCCTGTaGAGGGCTCCCCATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKKGQGL*RAPHGH Trigger: GTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTT...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGAAAGGTCAAGGCCTGTaGAGGGCTCCCCATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARKGQGL*RAPHGH Trigger: GTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTT...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGGGGTCTTGCTCCTTGTaGCTCATAGCCAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQGSCSL*LIASQI Trigger: GATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCC...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCTTCCTGGTACTTCCTaGTCCTCATGGGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQLPGTS*SSWGGE Trigger: TTCCCCTCCCCATGAGGAGCAGGAAGTACCAGGAAG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGACCCGGTGGACACTGCTaGTGGGGATCAGGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARPGGHC*WGSGSP Trigger: TGGGCTGCCTGATCCCCAGCAGCAGTGTCCACCGGG...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGACTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGLADIR*QVPGVL Trigger: CAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAG...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTGTCCCCAAACTCCTTaGCGATGGCCAGGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVCPQTP*RWPGAL Trigger: AAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGTGTCCCCAAACTCCTTaGCGATGGCCAGGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARCPQTP*RWPGAL Trigger: AAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACA...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAATGTCCCCAAACTCCTTaGCGATGGCCAGGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQCPQTP*RWPGAL Trigger: AAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACA...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCACTATCAGCCAGCTCCTaGGCAATGACTAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPLSASS*AMTRCR Trigger: GCGGCACCTAGTCATTGCCCAGGAGCTGGCTGATAG...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKRASCR*AIFMRA Trigger: AGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCT...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPRASCR*AIFMRA Trigger: AGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACAGTCCCCTGTGTGGTaGGTCTCTCCATTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQQSPVW*VSPFCS Trigger: GGAGCAGAATGGAGAGACCCACCACACAGGGGACTG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGCAGTCCCCTGTGTGGTaGGTCTCTCCATTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARQSPVW*VSPFCS Trigger: GGAGCAGAATGGAGAGACCCACCACACAGGGGACTG...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACTCCAGTCCCCTGTGTaGTGGGTCTCTCCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQLQSPV*WVSPFC Trigger: GCAGAATGGAGAGACCCACCACACAGGGGACTGGAG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGACTTCCTGCTCCTCATaGGGAGGGGAAGCGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQTSCSS*GGEASP Trigger: GGGACTCGCTTCCCCTCCCCATGAGGAGCAGGAAGT...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCCTCTCAATGGCATCTaGACCTTCCTGGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HALPHIAALACTHHLGWGPLNGI*TFLVLP Trigger: AGGAAGTACCAGGAAGGTCCAGATGCCATTGAGAGG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTGGGGTCTCCTCTCAATaGCATCTGGACCTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLGVSSQ*HLDLPG Trigger: ACCAGGAAGGTCCAGATGCCATTGAGAGGAGACCCC...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGTCCAGGGGACAGCGCTaGTCATCCATGCGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQSRGQR*SSMRLL Trigger: GAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCTCCAGCCGGCGGCTCTaGGAGCTGGCAATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMASSRRL*ELAMRS Trigger: TGACCTCATTGCCAGCTCCCAGAGCCGCCGGCTGGA...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTACTGGCCTCTTGCTCTaGACTCCCAGCAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVTGLLL*TPSKVH Trigger: GTGGACCTTGCTGGGAGTCCAGAGCAAGAGGCCAGT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGACTGGCCTCTTGCTCTaGACTCCCAGCAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARTGLLL*TPSKVH Trigger: GTGGACCTTGCTGGGAGTCCAGAGCAAGAGGCCAGT...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAACTGGCCTCTTGCTCTaGACTCCCAGCAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPTGLLL*TPSKVH Trigger: GTGGACCTTGCTGGGAGTCCAGAGCAAGAGGCCAGT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGATCAGGCAGCCCACTaGCCTCTTGCTCTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHSHPRTSWGTEDALALDQAAH*PLALDS Trigger: GGAGTCCAGAGCAAGAGGCCAGTGGGCTGCCTGATC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGATCAGGCAGCCCACTaGCCTCTTGCTCTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQDQAAH*PLALDS Trigger: GGAGTCCAGAGCAAGAGGCCAGTGGGCTGCCTGATC...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCGCCCCAAGAAGATGTaGGCATTGCCCAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQRPKKM*ALPRLL Trigger: CAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTCTGGGAGCTGGCAATaGGGTCAAAGAACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQSGSWQ*GQRTPL Trigger: CAGAGGAGTTCTTTGACCTCATTGCCAGCTCCCAGA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTCCTCAGTGCCCACCTaGACAGCAGCCTCGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVSSVPT*TAASKK Trigger: TTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGAGGA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGTCACCAATGGTCCGTaGCAGCAGCAAGTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRVTNGP*QQQVMF Trigger: AAACATGACTTGCTGCTGGCACGGACCATTGGTGAC...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGTCCAATGTTGTAGAGTaGTCTCGCCTCCCCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRSNVVE*SRLPNL Trigger: AAGGTTGGGGAGGCGAGAGCACTCTACAACATTGGA...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCGAGCATTGCCCAGGTTaGTGTAGGCCCTCCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAEHCPG*CRPSAQ Trigger: CTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTC...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTAGAAGATGTGAGCATTaGCCAGGTTGCTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLRRCEH*PGCCRP Trigger: GGGCCTACAGCAACCTGGGCAATGCTCACATCTTCT...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGGGTCTTGCTCCTTGTaGCTCATAGCCAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPGSCSL*LIASQI Trigger: GATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGAGCGCTGGTCATCCATaGGACTGCTCTGGAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQSAGHP*DCSGTY Trigger: GTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCT...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAAGCAAGTCATGTTTGTaGAACTGCAGGGCCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQSKSCL*NCRARA Trigger: TGCCCGGGCCCTGCAGTTCCACAAACATGACTTGCT...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGCCTCTCAATGGCATCTaGACCTTCCTGGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLGALGELAEFHIWQGRPLNGI*TFLVLP Trigger: AGGAAGTACCAGGAAGGTCCAGATGCCATTGAGAGG...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGGGGTCTCCTCTCAATaGCATCTGGACCTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARGVSSQ*HLDLPG Trigger: ACCAGGAAGGTCCAGATGCCATTGAGAGGAGACCCC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTATCAGCACTGTCCAGTaGAGAGTGACTACCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVISTVQ*RVTTLP Trigger: CGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGAT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAATCAGCACTGTCCAGTaGAGAGTGACTACCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPISTVQ*RVTTLP Trigger: CGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGAT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCGATCAGGCAGCCCACTaGCCTCTTGCTCTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMADQAAH*PLALDS Trigger: GGAGTCCAGAGCAAGAGGCCAGTGGGCTGCCTGATC...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| 3UTR CAA 72 bp | CCACCAGAAGAAGTCCTTGAAGCCCCTCTGGGGGCCTaGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEEVLEAPLGA*GELAEFHIWQG Trigger: GCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAGGACTTCTTCTGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGTCTGGGAGCTGGCAATaGGGTCAAAGAACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLESGSWQ*GQRTPL Trigger: CAGAGGAGTTCTTTGACCTCATTGCCAGCTCCCAGA...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCATCTGGGAGCTGGCAATaGGGTCAAAGAACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLDFVAANLPQQGWAQPSGSWQ*GQRTPL Trigger: CAGAGGAGTTCTTTGACCTCATTGCCAGCTCCCAGA...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAATCTGGGAGCTGGCAATaGGGTCAAAGAACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQSGSWQ*GQRTPL Trigger: CAGAGGAGTTCTTTGACCTCATTGCCAGCTCCCAGA...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGAAGAAAGCCACACCTaGCTTGAAGTCCCCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQEESHT*LEVPRL Trigger: AAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTC...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGGTAGAAGTAGGCATTaGCCAGCTGGCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQGRSRH*PAGCRW Trigger: CCATCTACAGCCAGCTGGGCAATGCCTACTTCTACC...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTTCCAATGTTGTAGAGTaGTCTCGCCTCCCCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSACPGVVRQIRVYLLSNVVE*SRLPNL Trigger: AAGGTTGGGGAGGCGAGAGCACTCTACAACATTGGA...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTCCAATGTTGTAGAGTaGTCTCGCCTCCCCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQSNVVE*SRLPNL Trigger: AAGGTTGGGGAGGCGAGAGCACTCTACAACATTGGA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGCAGTGTGTAGGTGTTaGCCAGGCTGTAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSHPRTSWGTEDALALAVCRC*PGCSKP Trigger: AGGCTTGCTACAGCCTGGGCAACACCTACACACTGC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGGGTCTTGCTCCTTGTaGCTCATAGCCAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLHSHPRTSWGTEDALALGSCSL*LIASQI Trigger: GATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTAGCGCTGGTCATCCATaGGACTGCTCTGGAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVSAGHP*DCSGTY Trigger: GTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGAGCGCTGGTCATCCATaGGACTGCTCTGGAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARSAGHP*DCSGTY Trigger: GTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCT...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPASPLCQGQAPSFLKGQPAGCR*HSVSSG Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCTGTCCCCAAACTCCTTaGCGATGGCCAGGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMACPQTP*RWPGAL Trigger: AAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACA...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGGCATCTGGACCTTCCTaGTACTTCCTGCTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARASGPS*YFLLLM Trigger: CATGAGGAGCAGGAAGTACCAGGAAGGTCCAGATGC...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATCCAGGGGACAGCGCTaGTCATCCATGCGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARSRGQR*SSMRLL Trigger: GAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGGGGQR*SSILED Trigger: GTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCC...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCTTAGCCTGCACCCTCTaGATAAGGCTGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CTFKYAGRPPCPARDPVLLACTL*IRLKKS Trigger: GGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAA...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATTAGCTGGCACCCGGTaGACACTGCTGCTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARLAGTR*TLLLGI Trigger: GATCCCCAGCAGCAGTGTCCACCGGGTGCCAGCTAA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCCCAGCTCCTGGGCAATaGCTAGGTGCCGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPPAPGQ*LGAAGG Trigger: ACCACCTGCGGCACCTAGTCATTGCCCAGGAGCTGG...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGGGTAGAAGTAGGCATTaGCCAGCTGGCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHSHPRTSWGTEDALALGRSRH*PAGCRW Trigger: CCATCTACAGCCAGCTGGGCAATGCCTACTTCTACC...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGGTCACCAATGGTCCGTaGCAGCAGCAAGTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKVTNGP*QQQVMF Trigger: AAACATGACTTGCTGCTGGCACGGACCATTGGTGAC...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGTCACCAATGGTCCGTaGCAGCAGCAAGTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEVTNGP*QQQVMF Trigger: AAACATGACTTGCTGCTGGCACGGACCATTGGTGAC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVSRKAV*PWRGTH Trigger: ATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGTCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKSRKAV*PWRGTH Trigger: ATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGA...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAGGCCCTCCGCTCAGCTaGCTTGTCCCCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGGPPLS*LVPKLL Trigger: AAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCC...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCGCAGTGTGTAGGTGTTaGCCAGGCTGTAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAAVCRC*PGCSKP Trigger: AGGCTTGCTACAGCCTGGGCAACACCTACACACTGC...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCTGGGCAATGACTAGGTaGCGCAGGTGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAWAMTR*RRWYSA Trigger: TGCTGAGTACCACCTGCGGCACCTAGTCATTGCCCA...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGACGGCCCAGGGCCAGCTaGAGGTGGGCAATATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGRPRAS*RWAIFM Trigger: CATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCG...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGAGCGCTGGTCATCCATaGGACTGCTCTGGAACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQSAGHP*DCSGTY Trigger: GTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCT...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEAPLGALGELAEFHIWQPAGCR*HSVSSG Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAACTAGGTGCCGCAGGTaGTACTCAGCAGCACGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGTRCRR*YSAARS Trigger: CGAGCGTGCTGCTGAGTACCACCTGCGGCACCTAGT...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTCTGCAGATGTTTCTTaGCAAAGGTCAAGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQSADVS*QRSRPV Trigger: CACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCCTCTCAATGGCATCTaGACCTTCCTGGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLEPLNGI*TFLVLP Trigger: AGGAAGTACCAGGAAGGTCCAGATGCCATTGAGAGG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATCTATCCTCCACGGATaGGGCAGCTGTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGSILHG*GSCGLS Trigger: GCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGACCTTGGCCTCCCCCATaGGGTCACCAATGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRPWPPP*GHQWSV Trigger: CACGGACCATTGGTGACCGCATGGGGGAGGCCAAGG...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTGAGCATTGCCCAGGTTaGTGTAGGCCCTCCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSICFCSQSDVASPSEHCPG*CRPSAQ Trigger: CTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTC...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATGGGCAATGACTAGGTaGCGCAGGTGGTACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARWAMTR*RRWYSA Trigger: TGCTGAGTACCACCTGCGGCACCTAGTCATTGCCCA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGACCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRPSPRR*PTLLRV Trigger: CACCCTCAACAATGTGGGGCACCTCCGAGGCGACGG...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAAGCAAGTCATGTTTGTaGAACTGCAGGGCCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKYACTFKYAGRPPCPARSKSCL*NCRARA Trigger: TGCCCGGGCCCTGCAGTTCCACAAACATGACTTGCT...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTACTTCCTGCTCCTCATaGGGAGGGGAAGCGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSICFCSQSDVASPSTSCSS*GGEASP Trigger: GGGACTCGCTTCCCCTCCCCATGAGGAGCAGGAAGT...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCTCTATCCTCCACGGATaGGGCAGCTGTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPSILHG*GSCGLS Trigger: GCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGA...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTTAGCCTGCACCCTCTaGATAAGGCTGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVLACTL*IRLKKS Trigger: GGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGTTAGCCTGCACCCTCTaGATAAGGCTGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLPGASSIFPQRPSARLACTL*IRLKKS Trigger: GGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAA...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTTTAGCTGGCACCCGGTaGACACTGCTGCTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSICFCSQSDVASPSLAGTR*TLLLGI Trigger: GATCCCCAGCAGCAGTGTCCACCGGGTGCCAGCTAA...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATCCTCAGTGCCCACCTaGACAGCAGCCTCGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGSSVPT*TAASKK Trigger: TTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGAGGA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAGGCCCTCCGCTCAGCTaGCTTGTCCCCAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRGPPLS*LVPKLL Trigger: AAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCC...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAGAGCATTGCCCAGGTTaGTGTAGGCCCTCCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLREHCPG*CRPSAQ Trigger: CTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTC...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTAAAGGTCAAGGCCTGTaGAGGGCTCCCCATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSICFCSQSDVASPSKGQGL*RAPHGH Trigger: GTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTT...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGACTTCCTGGTACTTCCTaGTCCTCATGGGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGLPGTS*SSWGGE Trigger: TTCCCCTCCCCATGAGGAGCAGGAAGTACCAGGAAG...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGTGTTTGCCCTTGGCGTaGTACACATTTCCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WGPWESWQSFTFGRAGLECLPLA*YTFPML Trigger: CAACATTGGAAATGTGTACCACGCCAAGGGCAAACA...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTGTTTGCCCTTGGCGTaGTACACATTTCCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QELGPRSRRVCLMDAPAVCLPLA*YTFPML Trigger: CAACATTGGAAATGTGTACCACGCCAAGGGCAAACA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGATCCAGGGGACAGCGCTaGTCATCCATGCGACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRSRGQR*SSMRLL Trigger: GAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGAAGAAAGCCACACCTaGCTTGAAGTCCCCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPEESHT*LEVPRL Trigger: AAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTC...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAAAAGGTCAAGGCCTGTaGAGGGCTCCCCATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRKGQGL*RAPHGH Trigger: GTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTT...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGACCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGPAGCR*HSVSSG Trigger: ACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGG...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCAGCAAGTCATGTTTGTaGAACTGCAGGGCCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPSKSCL*NCRARA Trigger: TGCCCGGGCCCTGCAGTTCCACAAACATGACTTGCT...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRRASCR*AIFMRA Trigger: AGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCT...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAGCATCTGGACCTTCCTaGTACTTCCTGCTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGASGPS*YFLLLM Trigger: CATGAGGAGCAGGAAGTACCAGGAAGGTCCAGATGC...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCATCAGCACTGTCCAGTaGAGAGTGACTACCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPISTVQ*RVTTLP Trigger: CGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGAT...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAACTGGCCTCTTGCTCTaGACTCCCAGCAAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRTGLLL*TPSKVH Trigger: GTGGACCTTGCTGGGAGTCCAGAGCAAGAGGCCAGT...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGGTAGAAGTAGGCATTaGCCAGCTGGCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPGRSRH*PAGCRW Trigger: CCATCTACAGCCAGCTGGGCAATGCCTACTTCTACC...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATCCAATGTTGTAGAGTaGTCTCGCCTCCCCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGSNVVE*SRLPNL Trigger: AAGGTTGGGGAGGCGAGAGCACTCTACAACATTGGA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGSRKAV*PWRGTH Trigger: ATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCAGAAGATGTGAGCATTaGCCAGGTTGCTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPRRCEH*PGCCRP Trigger: GGGCCTACAGCAACCTGGGCAATGCTCACATCTTCT...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGAGGGTCTTGCTCCTTGTaGCTCATAGCCAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRGSCSL*LIASQI Trigger: GATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCC...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGATCTGGGAGCTGGCAATaGGGTCAAAGAACTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRSGSWQ*GQRTPL Trigger: CAGAGGAGTTCTTTGACCTCATTGCCAGCTCCCAGA...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGATTAGCCTGCACCCTCTaGATAAGGCTGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGLACTL*IRLKKS Trigger: GGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAA...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGATCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRSRKAV*PWRGTH Trigger: ATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGA...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCTCTGCAGATGTTTCTTaGCAAAGGTCAAGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPSADVS*QRSRPV Trigger: CACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGA...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| 3UTR CAA 72 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTaGCCTCTCCCTCTCAGAAGTTGGGTCCTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVM*PLPLRSWVLSF Trigger: GAAACTGAGGACCCAACTTCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTTCCATCCTCTTTCTCTaGAGGTTACGCATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSSICFCSQSDVASPSSILFL*RLRIFC Trigger: ACAGAAGATGCGTAACCTCCAGAGAAAGAGGATGGA...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066889.13 |
||
| CDS-3UTR CCA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCTGTTTGCCCTTGGCGTaGTACACATTTCCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSNKYACTFKYAGRPPCPCLPLA*YTFPML Trigger: CAACATTGGAAATGTGTACCACGCCAAGGGCAAACA...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGATGTTTGCCCTTGGCGTaGTACACATTTCCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CALVSVSALRVMLPLPLRCLPLA*YTFPML Trigger: CAACATTGGAAATGTGTACCACGCCAAGGGCAAACA...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS TCA 90 bp | CAGTGCCCACCTGCACAGCAGCCTCGAAGAAAGCCACACCTGCCTTaGAGTCCCCCGCCTTGCACAGCCGCTCCCCTTCCAGGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QCPPAQQPRRKPHLP*SPPPCTAAPLPGPA Trigger: AGCTGGCCCTGGAAGGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGTGGGCACTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 90 bp | GTCCTCAGTGCCCACCTGCACAGCAGCCTCGAAGAAAGCCACACCTaGCTTGAAGTCCCCCGCCTTGCACAGCCGCTCCCCTTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSAHLHSSLEESHT*LEVPRLAQPLPFQG Trigger: GCCCTGGAAGGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGAGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 90 bp | TGCAGGGCTCCCCATGGACACATAGGCGTTCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCCTATCAGCCAGCTCCTGGGCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: CRAPHGHIGVPQAPA*SALSHPISQLLGND Trigger: GTCATTGCCCAGGAGCTGGCTGATAGGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGGAACGCCTATGTGTCCATGGGGAGCCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 90 bp | GGCTTCTCCGCTGCTGCTGGGCTAGTCAGCCGGCCCAGGGCCAGCTaGAGGTGGGCAATATTCATGCGGGCTGTCAGTTCTCCGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GFSAAAGLVSRPRAS*RWAIFMRAVSSPFR Trigger: CCGAAACGGAGAACTGACAGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCGGCTGACTAGCCCAGCAGCAGCGGAGAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGCTCGCCTCCCCAACCTaGTCCCCCTGCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQLASPT*SPCSWA Trigger: TGCCCAGGAGCAGGGGGACAAGGTTGGGGAGGCGAG...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGCAGCCCACTGGCCTCTaGCTCTGGACTCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HALPHIAALACTHHLGWGQPTGL*LWTPSK Trigger: CTTGCTGGGAGTCCAGAGCAAGAGGCCAGTGGGCTG...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CCA 90 bp | TCCGCTGCTGCTGGGCTAGTCAGCCGGCCCAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCTGTCAGTTCTCCGTTTCGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAAAGLVSRPRASCR*AIFMRAVSSPFRSP Trigger: TGGAGACCGAAACGGAGAACTGACAGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCGGCTGACTAGCCCAGCAGCAGCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 90 bp | TGTCCGTTTGGGTCTTGCTCCTTGTGCCTCATAGCCAGCCAGATCTaGCTTCTCCGCTGCTGCTGGGCTAGTCAGCCGGCCCAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPFGSCSLCLIASQI*LLRCCWASQPAQGQ Trigger: CTGGCCCTGGGCCGGCTGACTAGCCCAGCAGCAGCGGAGAAGCCAGATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAACGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 90 bp | GCCGCAGCAGGTCCCAGGTCTCGGCACTCAGCCTCTGTGTCCGTTTaGGTCTTGCTCCTGAGTAGGAGTCTCCCTCGGGACCACTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAAGPRSRHSASVSV*VLLLSRSLPRDHSD Trigger: GTCTGAGTGGTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCTGGGACCTGCTGCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCTCGCCTCCCCAACCTaGTCCCCCTGCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WGPWESWQSFTFGRAGLELASPT*SPCSWA Trigger: TGCCCAGGAGCAGGGGGACAAGGTTGGGGAGGCGAG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCACTCGCCTCCCCAACCTaGTCCCCCTGCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCLDFVAANLPQQGWAQPLASPT*SPCSWA Trigger: TGCCCAGGAGCAGGGGGACAAGGTTGGGGAGGCGAG...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGCTCCGCTCAGCTGCCTaGTCCCCAAACTCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APLGALGELAEFHIWQGRLRSAA*SPNSLA Trigger: CGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAG...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS TCA 90 bp | AGCATGCTCGGCCCTCTCCCACCCTATCAGCCAGCTCCTGGGCAATaGCTAGGTGCCGCAGGTGGTACTCAGCAGCACGCTCGTAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMLGPLPPYQPAPGQ*LGAAGGTQQHARSP Trigger: AGGACTACGAGCGTGCTGCTGAGTACCACCTGCGGCACCTAGTCATTGCCCAGGAGCTGGCTGATAGGGTGGGAGAGGGCCGAGCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGAAAGCCACACCTGCCTaGAAGTCCCCCGCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: APLGALGELAEFHIWQGRKATPA*KSPALH Trigger: GTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTT...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGTTGTCCCCAAACTCCTaGGCGATGGCCAGGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APLGALGELAEFHIWQGRLSPNS*AMARRS Trigger: AGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACAA...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTCAGCCCACTGGCCTCTaGCTCTGGACTCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GQDSACPGVVRQIRVYLLQPTGL*LWTPSK Trigger: CTTGCTGGGAGTCCAGAGCAAGAGGCCAGTGGGCTG...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | GTTCCCACTAGCCTTGGCCTCCCCCATGCGGTCACCAATGGTCCGTaGCAGCAGCAAGTCATGTTTGTGGAACTGCAGGGCCCGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VPTSLGLPHAVTNGP*QQQVMFVELQGPGI Trigger: TATGCCCGGGCCCTGCAGTTCCACAAACATGACTTGCTGCTGGCACGGACCATTGGTGACCGCATGGGGGAGGCCAAGGCTAGTGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS GCA 90 bp | AACTCAGAGGCCCTGTGCAGTGTCTCGCGGACATCAGGTGGCAGGTaGCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGTTTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSEALCSVSRTSGGR*PGSCAAFQESCLPL Trigger: CAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAGACACTGCACAGGGCCTCTGAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTAAAGCCACACCTGCCTaGAAGTCCCCCGCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQDSACPGVVRQIRVYLLKATPA*KSPALH Trigger: GTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTT...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | TGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAGACCCTGTGCTCAGGACCTTGAGTGTGTaGCCCAGGTTCCCACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTFKYAGRPPCPARDPVLRTLSV*PRFPLA Trigger: GGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCT...GAGCACAGGGTCTCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTTTGGGTCTTGCTCCTaGTGCCTCATAGCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HALPHIAALACTHHLGWGFGSCS*CLIASQ Trigger: CTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGCAGCCCACTGGCCTCTaGCTCTGGACTCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WGPWESWQSFTFGRAGLEQPTGL*LWTPSK Trigger: CTTGCTGGGAGTCCAGAGCAAGAGGCCAGTGGGCTG...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS TCA 90 bp | CCAGGTCTCGGCACTCAGCCTCTGTGTCCGTTTGGGTCTTGCTCCTaGGTAGGAGTCTCCCTCGGGACCACTCAGACTCTCAGAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGTQPLCPFGSCS*VGVSLGTTQTLRVL Trigger: CAGCACTCTGAGAGTCTGAGTGGTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
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| CDS GCA 90 bp | GTGCAGTGTCTCGCGGACATCAGGTGGCAGGTGCCCGGGGTCCTGTaGAGCATTCCAGGAAAGCTGTTTGCCCTTGGCGTGGTACACATT | + |
|
Preference number: 5 (lower is better) Translates to: VQCLADIRWQVPGVL*SIPGKLFALGVVHI Trigger: AATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAGACACTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | AGTTTCCCAGTAGGTAGTGGGTGTTACCCAGGTTGCCATAGGCCCTaGCCTGGGCCGCCCGGTCGCCTAGTTCCTTCACCAAAGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SFPVGSGCYPGCHRP*PGPPGRLVPSPKTG Trigger: ACCTGTCTTTGGTGAAGGAACTAGGCGACCGGGCGGCCCAGGGCAGGGCCTATGGCAACCTGGGTAACACCCACTACCTACTGGGAAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | AGCCCACTGGCCTCTTGCTCTGGACTCCCAGCAAGGTCCACACGCTaGTCATCCATCCGCTTAGCCTGCACCCTCTGGATAAGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLASCSGLPARSTR*SSIRLACTLWIRLK Trigger: CTTCAGCCTTATCCAGAGGGTGCAGGCTAAGCGGATGGATGAGCAGCGTGTGGACCTTGCTGGGAGTCCAGAGCAAGAGGCCAGTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | CACTGTCCAGTGGAGAGTGACTACCCTCCCGGGGTCTCCTCTCAATaGCATCTGGACCTTCCTGGTACTTCCTGCTCCTCATGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCPVESDYPPGVSSQ*HLDLPGTSCSSWGG Trigger: CCCTCCCCATGAGGAGCAGGAAGTACCAGGAAGGTCCAGATGCCATTGAGAGGAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAAAAGCCACACCTGCCTaGAAGTCCCCCGCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPASPLCQGQAPSFLKGQKATPA*KSPALH Trigger: GTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTT...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGAGGTTCCCACTAGCCTaGGCCTCCCCCATGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHSHPRTSWGTEDALALRFPLA*ASPMRS Trigger: TGACCGCATGGGGGAGGCCAAGGCTAGTGGGAACCT...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | CATGCCCTCCCCCATATAGCAGCTCTAGCCTGCACCCACCACCTGGGATGGGGGTTCCAGGAAAGCTGTTaGCCCTTGGCGTGGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: HALPHIAALACTHHLGWGFQESC*PLAWYT Trigger: TGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAA...CCCCCATCCCAGGTGGTGGGTGCAGGCTAGAGCTGCTATATGGGGGAGGGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGTTGTCCCCAAACTCCTaGGCGATGGCCAGGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPLPGASSIFPQRPSARLSPNS*AMARRS Trigger: AGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACAA...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGCTCCGCTCAGCTGCCTaGTCCCCAAACTCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LEAPLGALGELAEFHIWQLRSAA*SPNSLA Trigger: CGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAG...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTCCTTCATAGCCATCCCAGGACCAGCTGGGGGACAGAAGATGCCTTAGCACTGCTCCGCTCAGCTGCCTaGTCCCCAAACTCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLHSHPRTSWGTEDALALLRSAA*SPNSLA Trigger: CGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAG...CAGTGCTAAGGCATCTTCTGTCCCCCAGCTGGTCCTGGGATGGCTATGAAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | CAGCCACATCAAAGCGCCCCAAGAAGATGTGAGCATTGCCCAGGTTaGTGTAGGCCCTCCGCTCAGCTGCCTTGTCCCCAAACTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPHQSAPRRCEHCPG*CRPSAQLPCPQTPW Trigger: CCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCGCTTTGATGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | CTCCTGGGAGATCTGCAGATGTTTCTTGGCAAAGGTCAAGGCCTGTaGAGGGCTCCCCATGGACACATAGGCGTTCCCCAGGCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGDLQMFLGKGQGL*RAPHGHIGVPQAPA Trigger: TGCTGGAGCCTGGGGAACGCCTATGTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGATCTCCCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | TGCAGGGCTCCCCATGGACACATAGGCGTTCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCTTGTAATGTTCAGCAGCCACATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRAPHGHIGVPQAPA*SALSHLVMFSSHIK Trigger: TTTGATGTGGCTGCTGAACATTACAAGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGGAACGCCTATGTGTCCATGGGGAGCCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTAGGACCTTGAGTGTGTaGCCCAGGTTCCCACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QELGPRSRRVCLMDAPAVRTLSV*PRFPLA Trigger: GGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCT...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCCTCCGCTCAGCTGCCTaGTCCCCAAACTCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGCPSWPWEDLAYWGIMALRSAA*SPNSLA Trigger: CGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAG...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGAGGCCCTGGGTTAGACAGTTTGGGTCTTGCTCCTaGTGCCTCATAGCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSFPCPGPLGKRPWVRQFGSCS*CLIASQ Trigger: CTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAA...CTGTCTAACCCAGGGCCTCTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS TCA 90 bp | CCTTGGCGATGGCCAGGCGCTCTTTGTGGAAGGTTGTGGCCTCCGTaGAGTTTCCCAGTAGGTAGTGGGTGTTACCCAGGTTGCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWRWPGALCGRLWPP*SFPVGSGCYPGCHR Trigger: CCTATGGCAACCTGGGTAACACCCACTACCTACTGGGAAACTTCACGGAGGCCACAACCTTCCACAAAGAGCGCCTGGCCATCGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS TCA 90 bp | GTACGAGGCACCTGTACCCTTACATCAGCACTGTCCAGTGGAGAGTaGCTACCCTCCCGGGGTCTCCTCTCAATGGCATCTGGACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRGTCTLTSALSSGE*LPSRGLLSMASGPS Trigger: GGAAGGTCCAGATGCCATTGAGAGGAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGATGTAAGGGTACAGGTGCCTCGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS TCA 90 bp | AGGTCAAAGAACTCCTCTGTCTGTGGTGAAGCTGTCACGGAGGACTaGGCTGCTCTATCCTCCACGGATGGGGCAGCTGTGGCCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSKNSSVCGEAVTED*AALSSTDGAAVASA Trigger: TGCTGAGGCCACAGCTGCCCCATCCGTGGAGGATAGAGCAGCTCAGTCCTCCGTGACAGCTTCACCACAGACAGAGGAGTTCTTTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | GGAACTGCAGGGCCCGGGCATACTCCTTCAGGTAGAAGTAGGCATTaGCCAGCTGGCTGTAGATGGCACTCAGTGTCTTCAGGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTAGPGHTPSGRSRH*PAGCRWHSVSSGPQ Trigger: CTGAGGACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAATGCCTACTTCTACCTGAAGGAGTATGCCCGGGCCCTGCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS CCA 90 bp | GGTGCCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGTTTGCCCTTaGCGTGGTACACATTTCCAATGTTGTAGAGTGCTCTCGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GARGPVQHSRKAVCP*RGTHFQCCRVLSPP Trigger: GGGAGGCGAGAGCACTCTACAACATTGGAAATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | CTCATAAAACTCAGAGGCCCTGTGCAGTGTCTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LIKLRGPVQCLADIR*QVPGVLCSIPGKLF Trigger: AAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAGACACTGCACAGGGCCTCTGAGTTTTATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 90 bp | ATCCTCATCAGGCATGGTAGGGCCACGGGGCAGCACATCAGGGGGTaGGCAGCGCTGGTCATCAATCCTGGAGGACTGGTATTTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILIRHGRATGQHIRG*AALVINPGGLVFDK Trigger: CTTATCAAATACCAGTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCCTGATGTGCTGCCCCGTGGCCCTACCATGCCTGATGAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CCA 90 bp | GCAAGGTCCACACGCTGCTCATCCATCCGCTTAGCCTGCACCCTCTaGATAAGGCTGAAGAAATCCTCATCAGGCATGGTAGGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSTRCSSIRLACTL*IRLKKSSSGMVGPR Trigger: CCGTGGCCCTACCATGCCTGATGAGGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAAGCGGATGGATGAGCAGCGTGTGGACCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTGTTGGCAGCAGACGATaGCCTCATCGAATCGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: QELGPRSRRVCLMDAPAVVGSRR*PHRIGL Trigger: TAGGCCGATTCGATGAGGCAATCGTCTGCTGCCAAC...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGGTTGGCAGCAGACGATaGCCTCATCGAATCGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKVGSRR*PHRIGL Trigger: TAGGCCGATTCGATGAGGCAATCGTCTGCTGCCAAC...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCCTCGCCTCCCCAACCTaGTCCCCCTGCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSNKYACTFKYAGRPPCPLASPT*SPCSWA Trigger: TGCCCAGGAGCAGGGGGACAAGGTTGGGGAGGCGAG...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTTTTGGGTCTTGCTCCTaGTGCCTCATAGCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QELGPRSRRVCLMDAPAVFGSCS*CLIASQ Trigger: CTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAA...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGTGTCCGTTTGGGTCTaGCTCCTTGTGCCTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGPWESWQSFTFGRAGLEVSVWV*LLVPHS Trigger: GCTATGAGGCACAAGGAGCAAGACCCAAACGGACAC...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAGTGTCCGTTTGGGTCTaGCTCCTTGTGCCTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCLDFVAANLPQQGWAQPVSVWV*LLVPHS Trigger: GCTATGAGGCACAAGGAGCAAGACCCAAACGGACAC...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | GTGGCAGGTGCCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACATTTCCAATGTTGTAGAGTGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAGARGPVQHSRKAV*PWRGTHFQCCRVLS Trigger: CGAGAGCACTCTACAACATTGGAAATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | AATGTTCAGCAGCCACATCAAAGCGCCCCAAGAAGATGTGAGCATTaGCCAGGTTGCTGTAGGCCCTCCGCTCAGCTGCCTTGTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NVQQPHQSAPRRCEH*PGCCRPSAQLPCPQ Trigger: TTGGGGACAAGGCAGCTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCGCTTTGATGTGGCTGCTGAACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | AATACCCGTACGAGGCACCTGTACCCTTACATCAGCACTGTCCAGTaGAGAGTGACTACCCTCCCGGGGTCTCCTCTCAATGGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTRTRHLYPYISTVQ*RVTTLPGSPLNGIW Trigger: CCAGATGCCATTGAGAGGAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGATGTAAGGGTACAGGTGCCTCGTACGGGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | GGCATGGTAGGGCCACGGGGCAGCACATCAGGGGGTGGGCAGCGCTaGTCATCAATCCTGGAGGACTGGTATTTGATAAGCATGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GMVGPRGSTSGGGQR*SSILEDWYLISMLK Trigger: TTTCAACATGCTTATCAAATACCAGTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCCTGATGTGCTGCCCCGTGGCCCTACCATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGTTGGCAGCAGACGATaGCCTCATCGAATCGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LEAPLGALGELAEFHIWQVGSRR*PHRIGL Trigger: TAGGCCGATTCGATGAGGCAATCGTCTGCTGCCAAC...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGTTCCAGGAAAGCTGTTaGCCCTTGGCGTGGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: WGPWESWQSFTFGRAGLEFQESC*PLAWYT Trigger: TGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAA...CTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAGTGCAAGGTTCCAGGAAAGCTGTTaGCCCTTGGCGTGGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: LSPLPGASSIFPQRPSARFQESC*PLAWYT Trigger: TGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAA...CCTTGCACTTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGGGCAGGATCTGCAGATGTTTCTaGGCAAAGGTCAAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: APLGALGELAEFHIWQGRICRCF*AKVKAC Trigger: ACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGAT...CCTGCCCTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 90 bp | GGACTCCCAGCAAGGTCCACACGCTGCTCATCCATCCGCTTAGCCTaGACCCTCTGGATAAGGCTGAAGAAATCCTCATCAGGCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLPARSTRCSSIRLA*TLWIRLKKSSSGMV Trigger: TACCATGCCTGATGAGGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAAGCGGATGGATGAGCAGCGTGTGGACCTTGCTGGGAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | TGGCCTTCCTCCAGGGGACAGCGCTGGTCATCCATGCGACTGCTCTaGAACTTACTCAGCAGGTCAAAGAAACACTCCTCGTCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WPSSRGQRWSSMRLL*NLLSRSKKHSSSED Trigger: GTCTTCTGACGAGGAGTGTTTCTTTGACCTGCTGAGTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGAGGAAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCTGTCCATCATGGCCTTGGGAAGATTTGGCTTATTGGGGGATCATGGCCGCACCATATACCACCTaGCACACAGCCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGCPSWPWEDLAYWGIMAAPYTT*HTAFSA Trigger: GGCAGAGAAGGCTGTGTGCAAGGTGGTATATGGTGC...GGCCATGATCCCCCAATAAGCCAAATCTTCCCAAGGCCATGATGGACAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066889.13 |
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| CDS-3UTR CAA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGAAGGACCTTGAGTGTGTaGCCCAGGTTCCCACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKYACTFKYAGRPPCPARRTLSV*PRFPLA Trigger: GGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCT...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS-3UTR CAA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGTTCCAGGAAAGCTGTTaGCCCTTGGCGTGGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: LEAPLGALGELAEFHIWQFQESC*PLAWYT Trigger: TGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAA...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCCAGCCCACTGGCCTCTaGCTCTGGACTCCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSNKYACTFKYAGRPPCPQPTGL*LWTPSK Trigger: CTTGCTGGGAGTCCAGAGCAAGAGGCCAGTGGGCTG...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS CCA 90 bp | TACTCAGCAGGTCAAAGAAACACTCCTCGTCAGAAGACGGGGCCCTaGGAATACCCGTACGAGGCACCTGTACCCTTACATCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSAGQRNTPRQKTGP*EYPYEAPVPLHQHC Trigger: ACAGTGCTGATGTAAGGGTACAGGTGCCTCGTACGGGTATTCCCAGGGCCCCGTCTTCTGACGAGGAGTGTTTCTTTGACCTGCTGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GTAAGCAATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCTTGTCCCCAAACTCCTaGGCGATGGCCAGGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSNKYACTFKYAGRPPCPLSPNS*AMARRS Trigger: AGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACAA...GGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGATCTGCAGATGTTTCTaGGCAAAGGTCAAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKICRCF*AKVKAC Trigger: ACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGAT...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAAATCTGCAGATGTTTCTaGGCAAAGGTCAAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPASPLCQGQAPSFLKGQICRCF*AKVKAC Trigger: ACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGAT...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTCTGGACTTTGTAGCTGCCAATCTCCCTCAGCAGGGTTGGGCACAGCCAATCTGCAGATGTTTCTaGGCAAAGGTCAAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCLDFVAANLPQQGWAQPICRCF*AKVKAC Trigger: ACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGAT...TGGCTGTGCCCAACCCTGCTGAGGGAGATTGGCAGCTACAAAGTCCAGACACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGCAGAGTTTCACATTTGGCAGGGCAGGGCTTGAGGGAAAAGACTCTGGAGTGTCCGTTTGGGTCTaGCTCCTTGTGCCTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWQSFTFGRAGLEGKDSGVSVWV*LLVPHS Trigger: GCTATGAGGCACAAGGAGCAAGACCCAAACGGACAC...TCCAGAGTCTTTTCCCTCAAGCCCTGCCCTGCCAAATGTGAAACTCTGCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGATAGTGCCTGCCCTGGGGTCGTGAGGCAGATCAGAGTGTACCTCCTTTATTTGATAAGCATGTaGAAAAACTCATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQDSACPGVVRQIRVYLLYLISM*KNSSPG Trigger: GCCGGGGGATGAGTTTTTCAACATGCTTATCAAATA...AAGGAGGTACACTCTGATCTGCCTCACGACCCCAGGGCAGGCACTATCCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTTTTGGGTCTTGCTCCTaGTGCCTCATAGCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLCSSICFCSQSDVASPSFGSCS*CLIASQ Trigger: CTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAA...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAATATTTGATAAGCATGTaGAAAAACTCATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPASPLCQGQAPSFLKGQYLISM*KNSSPG Trigger: GCCGGGGGATGAGTTTTTCAACATGCTTATCAAATA...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAGCCCCTCTGGGGGCCTTGGGAGAGTTGGCAGAGTTTCACATTTGGCAGTATTTGATAAGCATGTaGAAAAACTCATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEAPLGALGELAEFHIWQYLISM*KNSSPG Trigger: GCCGGGGGATGAGTTTTTCAACATGCTTATCAAATA...CTGCCAAATGTGAAACTCTGCCAACTCTCCCAAGGCCCCCAGAGGGGCTTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AGACCTGCCTCTCCCCTCTGCCAGGGGCAAGCTCCATCTTTCCTCAAAGGCCAACTGGAGGACTGGTATTaGATAAGCATGTTGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPASPLCQGQAPSFLKGQLEDWY*ISMLKN Trigger: GTTTTTCAACATGCTTATCAAATACCAGTCCTCCAG...TTGGCCTTTGAGGAAAGATGGAGCTTGCCCCTGGCAGAGGGGAGAGGCAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CAAGAACTAGGACCACGGTCCCGAAGGGTCTGTCTCATGGATGCCCCGGCAGTTCTGGAGGACTGGTATTaGATAAGCATGTTGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QELGPRSRRVCLMDAPAVLEDWY*ISMLKN Trigger: GTTTTTCAACATGCTTATCAAATACCAGTCCTCCAG...AACTGCCGGGGCATCCATGAGACAGACCCTTCGGGACCGTGGTCCTAGTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTCAGAAGTTGGGTCCTCAGTTTCCCTTGCCCTGGCCCTCTGGGTAAGCTGGAGGACTGGTATTaGATAAGCATGTTGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLRSWVLSFPCPGPLGKLEDWY*ISMLKN Trigger: GTTTTTCAACATGCTTATCAAATACCAGTCCTCCAG...CTTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | AATAAATACGCATGTACATTCAAGTATGCGGGGCGGCCACCATGTCCCGCCCGATATTTGATAAGCATGTaGAAAAACTCATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NKYACTFKYAGRPPCPARYLISM*KNSSPG Trigger: GCCGGGGGATGAGTTTTTCAACATGCTTATCAAATA...TCGGGCGGGACATGGTGGCCGCCCCGCATACTTGAATGTACATGCGTATTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | ACCCTGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTTATTTGATAAGCATGTaGAAAAACTCATCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLCSSICFCSQSDVASPSYLISM*KNSSPG Trigger: GCCGGGGGATGAGTTTTTCAACATGCTTATCAAATA...AGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS-3UTR CAA 90 bp | TGTGCTCTAGTATCTGTTTCTGCTCTCAGAGTGATGTTGCCTCTCCCTCTCAGACTGGAGGACTGGTATTaGATAAGCATGTTGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CALVSVSALRVMLPLPLRLEDWY*ISMLKN Trigger: GTTTTTCAACATGCTTATCAAATACCAGTCCTCCAG...TCTGAGAGGGAGAGGCAACATCACTCTGAGAGCAGAAACAGATACTAGAGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS GCA 72 bp | TCCCCCGGCTCCTGGGCGTCCCCGTCGCCTCGGAGGTaGCCCACATTGTTGAGGGTGATGCGTAGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPGSWASPSPRR*PTLLRVMRSPG Trigger: GCCTGGGCTACGCATCACCCTCAACAATGTGGGGCACCTCCGAGGCGACGGGGACGCCCAGGAGCCGGGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CAA 90 bp | CCCGGCTCCTGGGCGTCCCCGTCGCCTCGGAGGTGCCCCACATTGTaGAGGGTGATGCGTAGCCCAGGCAGGCTGCCTACGCTAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGSWASPSPRRCPTL*RVMRSPGRLPTLAL Trigger: GAGGGCTAGCGTAGGCAGCCTGCCTGGGCTACGCATCACCCTCAACAATGTGGGGCACCTCCGAGGCGACGGGGACGCCCAGGAGCCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | AGCGAGTCCCTGCCTGGACCCCTCCAGTCCCCTGTGTaGTGGGTCTCTCCATTCTGCTCCCGGTCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SESLPGPLQSPV*WVSPFCSRSRG Trigger: CCCCCTGGACCGGGAGCAGAATGGAGAGACCCACCACACAGGGGACTGGAGGGGTCCAGGCAGGGACTCGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000127453.2 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | ATGCGTAGCCCAGGCAGGCTGCCTACGCTAGCCCTCTaGTCGTCCAGCCGGCGGCTCTGGGAGCTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MRSPGRLPTLAL*SSSRRLWELAM Trigger: CATTGCCAGCTCCCAGAGCCGCCGGCTGGACGACCAGAGGGCTAGCGTAGGCAGCCTGCCTGGGCTACGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CAA 72 bp | TCCTGGGCGTCCCCGTCGCCTCGGAGGTGCCCCACATaGTTGAGGGTGATGCGTAGCCCAGGCAGGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWASPSPRRCPT*LRVMRSPGRLP Trigger: AGGCAGCCTGCCTGGGCTACGCATCACCCTCAACAATGTGGGGCACCTCCGAGGCGACGGGGACGCCCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS GCA 72 bp | GCCCACCTGCACAGCAGCCTCGAAGAAAGCCACACCTaGCTTGAAGTCCCCCGCCTTGCACAGCCGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AHLHSSLEESHT*LEVPRLAQPLP Trigger: GGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CAA 90 bp | TCAGTGCCCACCTGCACAGCAGCCTCGAAGAAAGCCACACCTGCCTaGAAGTCCCCCGCCTTGCACAGCCGCTCCCCTTCCAGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVPTCTAASKKATPA*KSPALHSRSPSRAS Trigger: GCTGGCCCTGGAAGGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 72 bp | CCCCATGGACACATAGGCGTTCCCCAGGCTCCAGCATaGTCGGCCCTCTCCCACCCTATCAGCCAGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PHGHIGVPQAPA*SALSHPISQLL Trigger: CAGGAGCTGGCTGATAGGGTGGGAGAGGGCCGAGCATGCTGGAGCCTGGGGAACGCCTATGTGTCCATGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CCA 72 bp | CTCAGAGGCCCTGTGCAGTGTCTCGCGGACATCAGGTaGCAGGTGCCCGGGGTCCTGTGCAGCATTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRGPVQCLADIR*QVPGVLCSIPG Trigger: TCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAGACACTGCACAGGGCCTCTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS TCA 72 bp | CCTGCACAGCAGCCTCGAAGAAAGCCACACCTGCCTTaGAGTCCCCCGCCTTGCACAGCCGCTCCCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAQQPRRKPHLP*SPPPCTAAPLP Trigger: TGGAAGGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS TCA 72 bp | GGCCCTCTCCCACCCTATCAGCCAGCTCCTGGGCAATaGCTAGGTGCCGCAGGTGGTACTCAGCAGCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLPPYQPAPGQ*LGAAGGTQQHA Trigger: AGCGTGCTGCTGAGTACCACCTGCGGCACCTAGTCATTGCCCAGGAGCTGGCTGATAGGGTGGGAGAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 72 bp | GCCCTGTGCAGTGTCTCGCGGACATCAGGTGGCAGGTaGCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALCSVSRTSGGR*PGSCAAFQESC Trigger: ACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGCACCTGCCACCTGATGTCCGCGAGACACTGCACAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS GCA 72 bp | GTAGGTAGTGGGTGTTACCCAGGTTGCCATAGGCCCTaGCCTGGGCCGCCCGGTCGCCTAGTTCCTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VGSGCYPGCHRP*PGPPGRLVPSP Trigger: TGGTGAAGGAACTAGGCGACCGGGCGGCCCAGGGCAGGGCCTATGGCAACCTGGGTAACACCCACTACCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | AGGCATGGTAGGGCCACGGGGCAGCACATCAGGGGGTaGGCAGCGCTGGTCATCAATCCTGGAGGACTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RHGRATGQHIRG*AALVINPGGLV Trigger: TACCAGTCCTCCAGGATTGATGACCAGCGCTGCCCACCCCCTGATGTGCTGCCCCGTGGCCCTACCATGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS CAA 72 bp | ACCTGCACAGCAGCCTCGAAGAAAGCCACACCTGCCTaGAAGTCCCCCGCCTTGCACAGCCGCTCCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TCTAASKKATPA*KSPALHSRSPS Trigger: GGAAGGGGAGCGGCTGTGCAAGGCGGGGGACTTCAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CCA 72 bp | TCCGCTCAGCTGCCTTGTCCCCAAACTCCTTGGCGATaGCCAGGCGCTCTTTGTGGAAGGTTGTGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SAQLPCPQTPWR*PGALCGRLWPP Trigger: CGGAGGCCACAACCTTCCACAAAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | AGGCCCTCCGCTCAGCTGCCTTGTCCCCAAACTCCTTaGCGATGGCCAGGCGCTCTTTGTGGAAGGTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPSAQLPCPQTP*RWPGALCGRLW Trigger: CCACAACCTTCCACAAAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGACAAGGCAGCTGAGCGGAGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | GCTGGGCTAGTCAGCCGGCCCAGGGCCAGCTGCAGGTaGGCAATATTCATGCGGGCTGTCAGTTCTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGLVSRPRASCR*AIFMRAVSSPF Trigger: AAACGGAGAACTGACAGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCGGCTGACTAGCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | GGTCCCAGGTCTCGGCACTCAGCCTCTGTGTCCGTTTaGGTCTTGCTCCTGAGTAGGAGTCTCCCTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GPRSRHSASVSV*VLLLSRSLPRD Trigger: GTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCTGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
||
| CDS CAA 72 bp | AGGACCTTGAGTGTGTTGCCCAGGTTCCCACTAGCCTaGGCCTCCCCCATGCGGTCACCAATGGTCCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTLSVLPRFPLA*ASPMRSPMVRA Trigger: GGCACGGACCATTGGTGACCGCATGGGGGAGGCCAAGGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CAA 90 bp | AATCGGCCTAGGACCTTGAGTGTGTTGCCCAGGTTCCCACTAGCCTaGGCCTCCCCCATGCGGTCACCAATGGTCCGTGCCAGCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NRPRTLSVLPRFPLA*ASPMRSPMVRASSK Trigger: CTTGCTGCTGGCACGGACCATTGGTGACCGCATGGGGGAGGCCAAGGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCTAGGCCGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CAA 90 bp | GCAGGTCCCAGGTCTCGGCACTCAGCCTCTGTGTCCGTTTGGGTCTaGCTCCTGAGTAGGAGTCTCCCTCGGGACCACTCAGACTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGPRSRHSASVSVWV*LLSRSLPRDHSDSQ Trigger: CTGAGAGTCTGAGTGGTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCTGGGACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
||
| CDS GCA 72 bp | AGCCTTGGCCTCCCCCATGCGGTCACCAATGGTCCGTaGCAGCAGCAAGTCATGTTTGTGGAACTGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGLPHAVTNGP*QQQVMFVELQG Trigger: GCCCTGCAGTTCCACAAACATGACTTGCTGCTGGCACGGACCATTGGTGACCGCATGGGGGAGGCCAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 72 bp | GCCGGCCCAGGGCCAGCTGCAGGTGGGCAATATTCATaGGGGCTGTCAGTTCTCCGTTTCGGTCTCCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: AGPGPAAGGQYS*GLSVLRFGLQS Trigger: AGATTGGAGACCGAAACGGAGAACTGACAGCCCGCATGAATATTGCCCACCTGCAGCTGGCCCTGGGCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | TCTTGGCAAAGGTCAAGGCCTGTGCAGGGCTCCCCATaGACACATAGGCGTTCCCCAGGCTCCAGCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWQRSRPVQGSP*THRRSPGSSML Trigger: GAGCATGCTGGAGCCTGGGGAACGCCTATGTGTCCATGGGGAGCCCTGCACAGGCCTTGACCTTTGCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CAA 90 bp | CAGCAGACGATTGCCTCATCGAATCGGCCTAGGACCTTGAGTGTGTaGCCCAGGTTCCCACTAGCCTTGGCCTCCCCCATGCGGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QQTIASSNRPRTLSV*PRFPLALASPMRSP Trigger: TGGTGACCGCATGGGGGAGGCCAAGGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCTAGGCCGATTCGATGAGGCAATCGTCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS TCA 72 bp | GGCACTCAGCCTCTGTGTCCGTTTGGGTCTTGCTCCTaGGTAGGAGTCTCCCTCGGGACCACTCAGACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTQPLCPFGSCS*VGVSLGTTQTL Trigger: GAGAGTCTGAGTGGTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
||
| CDS GCA 72 bp | CAGCCACATCAAAGCGCCCCAAGAAGATGTGAGCATTaGCCAGGTTGCTGTAGGCCCTCCGCTCAGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPHQSAPRRCEH*PGCCRPSAQLP Trigger: AGGCAGCTGAGCGGAGGGCCTACAGCAACCTGGGCAATGCTCACATCTTCTTGGGGCGCTTTGATGTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 72 bp | CAGCACGCTCGTAGTCCTGTAGCAGTGTGTAGGTGTTaGCCAGGCTGTAGCAAGCCTGAGCCTCCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QHARSPVAVCRC*PGCSKPEPPLP Trigger: AGGCAGTGGAGGCTCAGGCTTGCTACAGCCTGGGCAACACCTACACACTGCTACAGGACTACGAGCGTGCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS GCA 72 bp | GCCTCTTGCTCTGGACTCCCAGCAAGGTCCACACGCTaGTCATCCATCCGCTTAGCCTGCACCCTCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: ASCSGLPARSTR*SSIRLACTLWI Trigger: TATCCAGAGGGTGCAGGCTAAGCGGATGGATGAGCAGCGTGTGGACCTTGCTGGGAGTCCAGAGCAAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS CCA 72 bp | AGTGCTCTCGCCTCCCCAACCTTGTCCCCCTGCTCCTaGGCAATGTCCAAGTGTCGTTGGCAGCAGACGATT | + |
|
Preference number: 6 (lower is better) Translates to: SALASPTLSPCS*AMSKCRWQQTI Trigger: AATCGTCTGCTGCCAACGACACTTGGACATTGCCCAGGAGCAGGGGGACAAGGTTGGGGAGGCGAGAGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | GGTCCCAGGTCTCGGCACTCAGCCTCTGTGTCCGTTTaGGTCTTGCTCCTTGTGCCTCATAGCCAGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GPRSRHSASVSV*VLLLVPHSQPD Trigger: ATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCTGGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CAA 72 bp | AGGTCTCGGCACTCAGCCTCTGTGTCCGTTTGGGTCTaGCTCCTGAGTAGGAGTCTCCCTCGGGACCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRHSASVSVWV*LLSRSLPRDHS Trigger: TGAGTGGTCCCGAGGGAGACTCCTACTCAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114134.9 ENSMUST00000127453.2 |
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| CDS CAA 90 bp | TGTCGTTGGCAGCAGACGATTGCCTCATCGAATCGGCCTAGGACCTaGAGTGTGTTGCCCAGGTTCCCACTAGCCTTGGCCTCCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CRWQQTIASSNRPRT*SVLPRFPLALASPM Trigger: CATGGGGGAGGCCAAGGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCTAGGCCGATTCGATGAGGCAATCGTCTGCTGCCAACGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS TCA 72 bp | AACTCCTCTGTCTGTGGTGAAGCTGTCACGGAGGACTaGGCTGCTCTATCCTCCACGGATGGGGCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSVCGEAVTED*AALSSTDGAAV Trigger: CACAGCTGCCCCATCCGTGGAGGATAGAGCAGCTCAGTCCTCCGTGACAGCTTCACCACAGACAGAGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS GCA 72 bp | ATGGCACTCAGTGTCTTCAGGTCCTCAGTGCCCACCTaGACAGCAGCCTCGAAGAAAGCCACACCTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MALSVFRSSVPT*TAASKKATPAL Trigger: CAAGGCAGGTGTGGCTTTCTTCGAGGCTGCTGTGCAGGTGGGCACTGAGGACCTGAAGACACTGAGTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
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| CDS GCA 72 bp | GGTCTCGGCACTCAGCCTCTGTGTCCGTTTGGGTCTTaGTCCTTGTGCCTCATAGCCAGCCAGATCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLGTQPLCPFGS*SLCLIASQIWL Trigger: AAGCCAGATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | TCCCCAAACTCCTTGGCGATGGCCAGGCGCTCTTTGTaGAAGGTTGTGGCCTCCGTGAAGTTTCCCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPNSLAMARRSL*KVVASVKFPSR Trigger: CCTACTGGGAAACTTCACGGAGGCCACAACCTTCCACAAAGAGCGCCTGGCCATCGCCAAGGAGTTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS CAA 72 bp | ATTGCCTCATCGAATCGGCCTAGGACCTTGAGTGTGTaGCCCAGGTTCCCACTAGCCTTGGCCTCCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: IASSNRPRTLSV*PRFPLALASPM Trigger: CATGGGGGAGGCCAAGGCTAGTGGGAACCTGGGCAACACACTCAAGGTCCTAGGCCGATTCGATGAGGCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CAA 72 bp | AGGTCTCGGCACTCAGCCTCTGTGTCCGTTTGGGTCTaGCTCCTTGTGCCTCATAGCCAGCCAGATCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRHSASVSVWV*LLVPHSQPDLA Trigger: AGCCAGATCTGGCTGGCTATGAGGCACAAGGAGCAAGACCCAAACGGACACAGAGGCTGAGTGCCGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS TCA 72 bp | TGGCCAGGCGCTCTTTGTGGAAGGTTGTGGCCTCCGTaGAGTTTCCCAGTAGGTAGTGGGTGTTACCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WPGALCGRLWPP*SFPVGSGCYPG Trigger: ACCTGGGTAACACCCACTACCTACTGGGAAACTTCACGGAGGCCACAACCTTCCACAAAGAGCGCCTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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| CDS GCA 72 bp | GGGCCCGGGCATACTCCTTCAGGTAGAAGTAGGCATTaGCCAGCTGGCTGTAGATGGCACTCAGTGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPGHTPSGRSRH*PAGCRWHSVSS Trigger: TGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAATGCCTACTTCTACCTGAAGGAGTATGCCCGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CCA 72 bp | GGTCTCCAATCTCCTGGGAGATCTGCAGATGTTTCTTaGCAAAGGTCAAGGCCTGTGCAGGGCTCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GLQSPGRSADVS*QRSRPVQGSPW Trigger: CCATGGGGAGCCCTGCACAGGCCTTGACCTTTGCCAAGAAACATCTGCAGATCTCCCAGGAGATTGGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS TCA 72 bp | ACCTGTACCCTTACATCAGCACTGTCCAGTGGAGAGTaGCTACCCTCCCGGGGTCTCCTCTCAATGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TCTLTSALSSGE*LPSRGLLSMAS Trigger: AGATGCCATTGAGAGGAGACCCCGGGAGGGTAGTCACTCTCCACTGGACAGTGCTGATGTAAGGGTACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | TCAGGTAGAAGTAGGCATTGCCCAGCTGGCTGTAGATaGCACTCAGTGTCTTCAGGTCCTCAGTGCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SGRSRHCPAGCR*HSVSSGPQCPP Trigger: AGGTGGGCACTGAGGACCTGAAGACACTGAGTGCCATCTACAGCCAGCTGGGCAATGCCTACTTCTACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 |
||
| CDS CCA 72 bp | GGTCAAAGAAACACTCCTCGTCAGAAGACGGGGCCCTaGGAATACCCGTACGAGGCACCTGTACCCTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GQRNTPRQKTGP*EYPYEAPVPLH Trigger: ATGTAAGGGTACAGGTGCCTCGTACGGGTATTCCCAGGGCCCCGTCTTCTGACGAGGAGTGTTTCTTTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000145884.8 |
||
| CDS CCA 72 bp | TCCAGGGGACAGCGCTGGTCATCCATGCGACTGCTCTaGAACTTACTCAGCAGGTCAAAGAAACACTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRGQRWSSMRLL*NLLSRSKKHSS Trigger: CGAGGAGTGTTTCTTTGACCTGCTGAGTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS GCA 72 bp | GCCCGGGGTCCTGTGCAGCATTCCAGGAAAGCTGTTTaGCCTTGGCGTGGTACACATTTCCAATGTTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARGPVQHSRKAV*PWRGTHFQCCR Trigger: TCTACAACATTGGAAATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACCCCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
||
| CDS GCA 72 bp | CTTCCTCCAGGGGACAGCGCTGGTCATCCATGCGACTaGTCTGGAACTTACTCAGCAGGTCAAAGAAACACT | + |
|
Preference number: 6 (lower is better) Translates to: LPPGDSAGHPCD*SGTYSAGQRNT Trigger: AGTGTTTCTTTGACCTGCTGAGTAAGTTCCAGAGCAGTCGCATGGATGACCAGCGCTGTCCCCTGGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
||
| CDS GCA 72 bp | GCAAGGTCCACACGCTGCTCATCCATCCGCTTAGCCTaGACCCTCTGGATAAGGCTGAAGAAATCCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: ARSTRCSSIRLA*TLWIRLKKSSS Trigger: TGATGAGGATTTCTTCAGCCTTATCCAGAGGGTGCAGGCTAAGCGGATGGATGAGCAGCGTGTGGACCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000114134.9 ENSMUST00000145884.8 |
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| CDS CCA 72 bp | GGTCCTGTGCAGCATTCCAGGAAAGCTGTTTGCCCTTaGCGTGGTACACATTTCCAATGTTGTAGAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GPVQHSRKAVCP*RGTHFQCCRVL Trigger: GAGCACTCTACAACATTGGAAATGTGTACCACGCCAAGGGCAAACAGCTTTCCTGGAATGCTGCACAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066889.13 ENSMUST00000066936.9 ENSMUST00000078616.12 ENSMUST00000145884.8 |
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