RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPRIN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071531

Ensembl transcript IDs: ENSMUST00000226511.2, ENSMUST00000226613.2

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGAGCCGCAGACTCAGTTAGTTCTCCCTGTCCCCAGCTACACTaGGCTGGCCCAGGTGTGTGTCGCAGGCTAACACCAGGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: HRAADSVSSPCPQLH*AGPGVCRRLTPGLV
Trigger: GACCAGCCCTGGTGTTAGCCTGCGACACACACCTGGGCCAGCTCAGTGTAGCTGGGGACAGGGAGAACTAACTGAGTCTGCGGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp AGAAACAGGTTCTCTCCAGTCCCTCTCCAGGCTCCCAGTATGCGCTaGTCCCCAGCCAGCCTCGTCCTCCACGTAGAGATGCTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: RNRFSPVPLQAPSMR*SPASLVLHVEMLPP
Trigger: GGGAGGCAGCATCTCTACGTGGAGGACGAGGCTGGCTGGGGATCAGCGCATACTGGGAGCCTGGAGAGGGACTGGAGAGAACCTGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp AGGACCTGGAGCTTCCAAGCCTGCACACTCAAGAGCATGAGAGCCTaGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTAGA +
Preference number: 1 (lower is better)
Translates to: RTWSFQACTLKSMRA*GLLSTPGKPELCCR
Trigger: TCTACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCTCTTGAGTGTGCAGGCTTGGAAGCTCCAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp TCTGAGGACAGGAAGGTGTCACAGCACAAGCCACAGCCGACTCGATaGACAGCACAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGG +
Preference number: 1 (lower is better)
Translates to: SEDRKVSQHKPQPTR*TAQAVGHGEEQEVW
Trigger: CCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTGTGCTGTGCATCGAGTCGGCTGTGGCTTGTGCTGTGACACCTTCCTGTCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp GGGACAGATCCTAGGGCTCACTACAGAAGCCTACCCCCAAGGACCTaGAGCTTCCAAGCCTGCACACTCAAGAGCATGAGAGCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: GTDPRAHYRSLPPRT*SFQACTLKSMRAWG
Trigger: GCCCCAGGCTCTCATGCTCTTGAGTGTGCAGGCTTGGAAGCTCCAGGTCCTTGGGGGTAGGCTTCTGTAGTGAGCCCTAGGATCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTaGTTTGGAGCAGCTGCAGCTTTGGCTGGAAAGTCAACCTCTACC +
Preference number: 1 (lower is better)
Translates to: LCPTFPVEGVWPPFW*FGAAAALAGKSTST
Trigger: GGTAGAGGTTGACTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGGTTTaGAGCAGCTGCAGCTTTGGCTGGAAAGTCAACCTCTACCCTTCA +
Preference number: 1 (lower is better)
Translates to: PHLPSRGRLATLLVV*SSCSFGWKVNLYPS
Trigger: TGAAGGGTAGAGGTTGACTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp CATGGAACCACAAGCCCGAGCAAGGCTGGTATTCAAGTTAAAAGGTaGGTCCCGGTGGCATGGAGTCTCCACTGTGCCTGTCACTGGCCT +
Preference number: 1 (lower is better)
Translates to: HGTTSPSKAGIQVKR*VPVAWSLHCACHWP
Trigger: AGGCCAGTGACAGGCACAGTGGAGACTCCATGCCACCGGGACTCACCTTTTAACTTGAATACCAGCCTTGCTCGGGCTTGTGGTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp GACTTGTGCCTGCCTCAGCAATGCTCAGCACTATTCCTAGGCCAGTaGCTTGCGACCACATTCCTATTCCTGCCCTGCCCAGAGGAGAGT +
Preference number: 1 (lower is better)
Translates to: DLCLPQQCSALFLGQ*LATTFLFLPCPEES
Trigger: ACTCTCCTCTGGGCAGGGCAGGAATAGGAATGTGGTCGCAAGTCACTGGCCTAGGAATAGTGCTGAGCATTGCTGAGGCAGGCACAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp CCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTaGGAGTCACCAGAGAAAAGACCTCGCCCAGACAGCCAGAGCACC +
Preference number: 1 (lower is better)
Translates to: PKPRDSQSRTQYCTA*ESPEKRPRPDSQST
Trigger: GGTGCTCTGGCTGTCTGGGCGAGGTCTTTTCTCTGGTGACTCTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp GGTCTTCAGCAGACTGCTCCATCCTCCTGGGCCTTAAGAAGCCCTTaGGTAATAAAACCAGACGGAAAGACTCTGGGTCCCTCTCCCCAC +
Preference number: 1 (lower is better)
Translates to: GLQQTAPSSWALRSP*VIKPDGKTLGPSPH
Trigger: GTGGGGAGAGGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCTTCTTAAGGCCCAGGAGGATGGAGCAGTCTGCTGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CGAAGTCAAGAGATCCTAAGACAGCACCTGAGATGCCGTGTGACCTaGAGTGACAAGGGGAATGCTTGTCTGGACAGTCACCCTGCCCCT +
Preference number: 1 (lower is better)
Translates to: RSQEILRQHLRCRVT*SDKGNACLDSHPAP
Trigger: AGGGGCAGGGTGACTGTCCAGACAAGCATTCCCCTTGTCACTCCAGGTCACACGGCATCTCAGGTGCTGTCTTAGGATCTCTTGACTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp ACTGTAATACATTTGGGGACAGGTGGGCACTTATTCTCTACTTCCTaGGGCAGGGAGCCTGGCACAGTGACCTGCAGGGCAGGCTTTTGG +
Preference number: 1 (lower is better)
Translates to: TVIHLGTGGHLFSTS*GREPGTVTCRAGFW
Trigger: CCAAAAGCCTGCCCTGCAGGTCACTGTGCCAGGCTCCCTGCCTCAGGAAGTAGAGAATAAGTGCCCACCTGTCCCCAAATGTATTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp CCCGAACTCTGCTGTAGAGCCTCGACTGGCCCCAAGTCACATCCTTaGTTGGTTTCTGTCCTTCCCTACCTCATTCTCCTCACCTCAGAG +
Preference number: 1 (lower is better)
Translates to: PELCCRASTGPKSHP*LVSVLPYLILLTSE
Trigger: CTCTGAGGTGAGGAGAATGAGGTAGGGAAGGACAGAAACCAATCAAGGATGTGACTTGGGGCCAGTCGAGGCTCTACAGCAGAGTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp TCTGCTCCAAGCCAAAGGCCTCTGTTACAGTTTCCCTACCTCCTCTaGAGCAGCAGGACCTTGCTGACAGGGCAGATAAGCCACCTTTCA +
Preference number: 1 (lower is better)
Translates to: SAPSQRPLLQFPYLL*SSRTLLTGQISHLS
Trigger: TGAAAGGTGGCTTATCTGCCCTGTCAGCAAGGTCCTGCTGCTGCAGAGGAGGTAGGGAAACTGTAACAGAGGCCTTTGGCTTGGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp GATATGTTTGAAGAGCTCATGTTACAGGGCCCAGACCTCCCTCCTTaGTGCACTGACTCTGGCTATCTGCAAAGGAGAGGGTGGCCCATG +
Preference number: 1 (lower is better)
Translates to: DMFEELMLQGPDLPP*CTDSGYLQRRGWPM
Trigger: CATGGGCCACCCTCTCCTTTGCAGATAGCCAGAGTCAGTGCAGCAAGGAGGGAGGTCTGGGCCCTGTAACATGAGCTCTTCAAACATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CTGGATAGGAGCCCAGTTCCGCACAGGAAAGGCACAAAGGTAGGATaGTGTGCTTGTACTCACCCTACAAGGAGGCTCAAACCACACCCA +
Preference number: 1 (lower is better)
Translates to: LDRSPVPHRKGTKVG*CACTHPTRRLKPHP
Trigger: TGGGTGTGGTTTGAGCCTCCTTGTAGGGTGAGTACAAGCACACCATCCTACCTTTGTGCCTTTCCTGTGCGGAACTGGGCTCCTATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp AGATCTTCCTGTGGCAGCTCTGGATACACTCATGATGCCTCGAAGTaGAGCAGCTATCATGTGACCATGAGGTCAGCCCTCACTAAGCCC +
Preference number: 1 (lower is better)
Translates to: RSSCGSSGYTHDASK*SSYHVTMRSALTKP
Trigger: GGGCTTAGTGAGGGCTGACCTCATGGTCACATGATAGCTGCTGCACTTCGAGGCATCATGAGTGTATCCAGAGCTGCCACAGGAAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp GGTCCCAGAAGACAGAGGGAAAAACCTGCCAGGACACGGAGCCCTTaGACTCTAGGGTTCATGCCTCAGAGGACAGAATTTACCAGATCA +
Preference number: 1 (lower is better)
Translates to: GPRRQREKPARTRSP*TLGFMPQRTEFTRS
Trigger: TGATCTGGTAAATTCTGTCCTCTGAGGCATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGTCTTCTGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp TTCTCTAGCTTTGTCGTCTCTGGATCCTCTACCCATGCTCCAGATTaGACCGGAGTCCCCCAGGAAGGGAGTAAGTGTTCGAAACGGATG +
Preference number: 1 (lower is better)
Translates to: FSSFVVSGSSTHAPD*TGVPQEGSKCSKRM
Trigger: CATCCGTTTCGAACACTTACTCCCTTCCTGGGGGACTCCGGTCCAATCTGGAGCATGGGTAGAGGATCCAGAGACGACAAAGCTAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp CCAAACCTAGGACTCTGGGATGCCCTTCTTTCTGACCTCAGTCTTTaGGGCCACCCAGCAGGACCACGGACAACTTCTGATTCTTCAGAA +
Preference number: 1 (lower is better)
Translates to: PNLGLWDALLSDLSL*GHPAGPRTTSDSSE
Trigger: TTCTGAAGAATCAGAAGTTGTCCGTGGTCCTGCTGGGTGGCCTCAAAGACTGAGGTCAGAAAGAAGGGCATCCCAGAGTCCTAGGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp TTCTCTGGTCTCTTCTGTCAAACATGCCTGGAATGGGGACAGTCCTaGCGATCCACACCTTTTCCTCAGGCCTGGGAAGACTTTCTTCCG +
Preference number: 1 (lower is better)
Translates to: FSGLFCQTCLEWGQS*RSTPFPQAWEDFLP
Trigger: CGGAAGAAAGTCTTCCCAGGCCTGAGGAAAAGGTGTGGATCGTCAGGACTGTCCCCATTCCAGGCATGTTTGACAGAAGAGACCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp TTTCTCCGAAGCTGTTCCTCCTGCATCCACTGTTACTCTGCCAGGTaGCTGCTTACTGACCCTCAACATGCTGGCCTAAGTCAACCACTG +
Preference number: 1 (lower is better)
Translates to: FLRSCSSCIHCYSAR*LLTDPQHAGLSQPL
Trigger: CAGTGGTTGACTTAGGCCAGCATGTTGAGGGTCAGTAAGCAGTCACCTGGCAGAGTAACAGTGGATGCAGGAGGAACAGCTTCGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp AACTCTGCTGTAGAGCCTCGACTGGCCCCAAGTCACATCCTTGATTaGTTTCTGTCCTTCCCTACCTCATTCTCCTCACCTCAGAGGACT +
Preference number: 1 (lower is better)
Translates to: NSAVEPRLAPSHILD*FLSFPTSFSSPQRT
Trigger: AGTCCTCTGAGGTGAGGAGAATGAGGTAGGGAAGGACAGAAACCAATCAAGGATGTGACTTGGGGCCAGTCGAGGCTCTACAGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CGTCTAGCCTACCAGTATTCTCTGGTCTCTTCTGTCAAACATGCCTaGAATGGGGACAGTCCTGACGATCCACACCTTTTCCTCAGGCCT +
Preference number: 1 (lower is better)
Translates to: RLAYQYSLVSSVKHA*NGDSPDDPHLFLRP
Trigger: AGGCCTGAGGAAAAGGTGTGGATCGTCAGGACTGTCCCCATTCCAGGCATGTTTGACAGAAGAGACCAGAGAATACTGGTAGGCTAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp TTCTTAATAAAGGGAGCCCAGGAAAGATGGGCTGCAGGATATGTTTaGAGAGCTCATGTTACAGGGCCCAGACCTCCCTCCTTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: FLIKGAQERWAAGYV*RAHVTGPRPPSLLH
Trigger: GTGCAGCAAGGAGGGAGGTCTGGGCCCTGTAACATGAGCTCTTCAAACATATCCTGCAGCCCATCTTTCCTGGGCTCCCTTTATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp AGTCCCACTTCAGATTCCACAGGGGCCCTGCCCTGCCTGACAAGTTaGATGAGAACTCATGAAGGACTAGCCATAGCTTCAGATGACAAA +
Preference number: 1 (lower is better)
Translates to: SPTSDSTGALPCLTS*MRTHEGLAIASDDK
Trigger: TTTGTCATCTGAAGCTATGGCTAGTCCTTCATGAGTTCTCATCCAACTTGTCAGGCAGGGCAGGGCCCCTGTGGAATCTGAAGTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp GCCTGGAGCCAGCCTATCTTGCCTTCTTTCTTTGATCCACTGACATaGCATTTCTGCTCCAAGCCAAAGGCCTCTGTTACAGTTTCCCTA +
Preference number: 1 (lower is better)
Translates to: AWSQPILPSFFDPLT*HFCSKPKASVTVSL
Trigger: TAGGGAAACTGTAACAGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAGATAGGCTGGCTCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp GATTCAGTTACTCGAAGTCAAGAGATCCTAAGACAGCACCTGAGATaGCGTGTGACCTGGAGTGACAAGGGGAATGCTTGTCTGGACAGT +
Preference number: 1 (lower is better)
Translates to: DSVTRSQEILRQHLR*RVTWSDKGNACLDS
Trigger: ACTGTCCAGACAAGCATTCCCCTTGTCACTCCAGGTCACACGGCATCTCAGGTGCTGTCTTAGGATCTCTTGACTTCGAGTAACTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp CAGCCTATCTTGCCTTCTTTCTTTGATCCACTGACATGCCATTTCTaGTCCAAGCCAAAGGCCTCTGTTACAGTTTCCCTACCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: QPILPSFFDPLTCHF*SKPKASVTVSLPPL
Trigger: CAGAGGAGGTAGGGAAACTGTAACAGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAGATAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 90 bp GACAGAATTTACCAGATCAAAGGAAGCAAGACTAGCCATGCCCAATaGCCCCTTTCTGCCATGGCCTGTCAAAGCTCTAATCTCTCAACT +
Preference number: 1 (lower is better)
Translates to: DRIYQIKGSKTSHAQ*PLSAMACQSSNLST
Trigger: AGTTGAGAGATTAGAGCTTTGACAGGCCATGGCAGAAAGGGGGCATTGGGCATGGCTAGTCTTGCTTCCTTTGATCTGGTAAATTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp TCTACAGTTCAAACACACAGCAAACAAGACGGCCTTCGGCAGGACTaGTACTCTCTGGCACATCCATATAATGGGATACAGCTTTTAGGG +
Preference number: 1 (lower is better)
Translates to: STVQTHSKQDGLRQD*YSLAHPYNGIQLLG
Trigger: CCCTAAAAGCTGTATCCCATTATATGGATGTGCCAGAGAGTATCAGTCCTGCCGAAGGCCGTCTTGTTTGCTGTGTGTTTGAACTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CTAGATCAGAAATCTATAAGACAGTCAATGACCTTGTTCAACCCCTaGCCAGAGCACAGGCACTTGCCTTGGGTCACACAACTATTCAGA +
Preference number: 1 (lower is better)
Translates to: LDQKSIRQSMTLFNP*PEHRHLPWVTQLFR
Trigger: TCTGAATAGTTGTGTGACCCAAGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAAGGTCATTGACTGTCTTATAGATTTCTGATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp GTCCAGTTAACAAGGCAAGAATCATGGCTATCTTCACATTATAGGTaGAGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACT +
Preference number: 1 (lower is better)
Translates to: VQLTRQESWLSSHYR*RDQSPETVSHVPNT
Trigger: AGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCTCCACCTATAATGTGAAGATAGCCATGATTCTTGCCTTGTTAACTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CTGGCCATGAAACACTGGGCAACACGGCCAGCACTAAGTTTTACGTaGGTTATGAAACTTCATTCTCACAAGCCAAAGCTAAAATATGGC +
Preference number: 1 (lower is better)
Translates to: LAMKHWATRPALSFT*VMKLHSHKPKLKYG
Trigger: GCCATATTTTAGCTTTGGCTTGTGAGAATGAAGTTTCATAACCCACGTAAAACTTAGTGCTGGCCGTGTTGCCCAGTGTTTCATGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp AGAGAACTAAGGGGACTCAAGACCCTGGACCTGGTAATCAGGCAGTaGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTTGTAATT +
Preference number: 1 (lower is better)
Translates to: RELRGLKTLDLVIRQ*LRNNCASMPKDFVI
Trigger: AATTACAAAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGGTCCAGGGTCTTGAGTCCCCTTAGTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp CTTCAATCCCATTTCAGAGCTGAAGAAGTTGCAGGTCTTCAGGGCTaGTGTCTAGCCCAAGACTTTATGAACACCAATGTGAATTCAGAA +
Preference number: 1 (lower is better)
Translates to: LQSHFRAEEVAGLQG*CLAQDFMNTNVNSE
Trigger: TTCTGAATTCACATTGGTGTTCATAAAGTCTTGGGCTAGACACCAGCCCTGAAGACCTGCAACTTCTTCAGCTCTGAAATGGGATTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp GAAATTGAGACAGAAAACATAAAGATGCTGGAGAAAGAACATCTATaGGAGAGTGTAGAAGGCCAGTTTGCTCTTGGGTGCACAGACATG +
Preference number: 1 (lower is better)
Translates to: EIETENIKMLEKEHL*ESVEGQFALGCTDM
Trigger: CATGTCTGTGCACCCAAGAGCAAACTGGCCTTCTACACTCTCCCATAGATGTTCTTTCTCCAGCATCTTTATGTTTTCTGTCTCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp TACGTGGGTTATGAAACTTCATTCTCACAAGCCAAAGCTAAAATATaGCTTCAATCCCATTTCAGAGCTGAAGAAGTTGCAGGTCTTCAG +
Preference number: 1 (lower is better)
Translates to: YVGYETSFSQAKAKI*LQSHFRAEEVAGLQ
Trigger: CTGAAGACCTGCAACTTCTTCAGCTCTGAAATGGGATTGAAGCCATATTTTAGCTTTGGCTTGTGAGAATGAAGTTTCATAACCCACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 90 bp ACTCTACAGACAGTCTCACACATACCCATAAAATTCTGTACACACTaGGACTCACTTGTTAATGCTCCCAGCTGTATAATAACCAGGAAT +
Preference number: 1 (lower is better)
Translates to: TLQTVSHIPIKFCTH*DSLVNAPSCIITRN
Trigger: ATTCCTGGTTATTATACAGCTGGGAGCATTAACAAGTGAGTCTCAGTGTGTACAGAATTTTATGGGTATGTGTGAGACTGTCTGTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 90 bp TCTGAAAAGGTCAAAACCACAGATGTCATAAAGAGTCCACTAGTTTaGCCAGGCCAGAAGACACGAGATCAACATTATATTCTATTATCT +
Preference number: 1 (lower is better)
Translates to: SEKVKTTDVIKSPLV*PGQKTRDQHYILLS
Trigger: AGATAATAGAATATAATGTTGATCTCGTGTCTTCTGGCCTGGCCAAACTAGTGGACTCTTTATGACATCTGTGGTTTTGACCTTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTCCCACCCAAATCTACTaGTCCCCACAGCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCPTQIY*SPQPRP
Trigger: TGGCCTGGGCTGTGGGGACCAGTAGATTTGGGTGGG...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGATGCCATGTGGACTGTaGTGGCAGCCACATCCCCCA +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVMPCGL*WQPHPP
Trigger: TGGGGGATGTGGCTGCCACCACAGTCCACATGGCAT...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCTTCACTCCCCAGGGTaGATACTTCCCTACTCCCAC +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVLHSPG*ILPYSH
Trigger: GTGGGAGTAGGGAAGTATTCACCCTGGGGAGTGAAG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCCGTGTGACCTGGAGTaGCAAGGGGAATGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVPCDLE*QGECLS
Trigger: AGACAAGCATTCCCCTTGTCACTCCAGGTCACACGG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCTGACTCTGGCTATCTaGAAAGGAGAGGGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVLTLAI*KGEGGP
Trigger: TGGGCCACCCTCTCCTTTGCAGATAGCCAGAGTCAG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp CCCAGCAGGCCGTGGGCTACTGCACTGGCTCTGCCTTCTCTAGCTTaGTCGTCTCTGGATCCTCTACCCATGCTCCAGATTGGACCGGAG +
Preference number: 2 (lower is better)
Translates to: PSRPWATALALPSLA*SSLDPLPMLQIGPE
Trigger: CTCCGGTCCAATCTGGAGCATGGGTAGAGGATCCAGAGACGACAAAGCTAGAGAAGGCAGAGCCAGTGCAGTAGCCCACGGCCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTTTATTCTCTACTTCCTaGGGCAGGGAGCCTGGCACA +
Preference number: 2 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCLFSTS*GREPGT
Trigger: TGTGCCAGGCTCCCTGCCTCAGGAAGTAGAGAATAA...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGCCTGGCACAGTGACCTaGAGGGCAGGCTTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVPGTVT*RAGFWK
Trigger: TTTCCAAAAGCCTGCCCTGCAGGTCACTGTGCCAGG...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTTCCCATTCGTTCCCATaGACACCCTCAGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: DSHPAPHVGREARVPAHISHSFP*TPSAPP
Trigger: GGGAGGGGCTGAGGGTGTGCATGGGAACGAATGGGA...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp CTTGGCTCTAGGAGCAATGGTTTCAGAGGTTCCCAGCCAGAAGGCACGTGTCCTGGGAGCCTGGCACAGTaGCCTGCAGGGCAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: LGSRSNGFRGSQPEGTCPGSLAQ*PAGQAF
Trigger: AAAAGCCTGCCCTGCAGGTCACTGTGCCAGGCTCCC...AGGACACGTGCCTTCTGGCTGGGAACCTCTGAAACCATTGCTCCTAGAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGCCCACCCCCTGGCCATaGAACACTGGGCAACACGGC +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEPTPWP*NTGQHG
Trigger: GCCGTGTTGCCCAGTGTTTCATGGCCAGGGGGTGGG...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGAGCTGTGGGCCACGGTaGGGAGCAGGAAGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLESCGPR*GAGSVA
Trigger: GGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCT...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp TCTAATGCTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGCAGAAGCAGCTAAGATaGGGAAGGGACACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SNAVPHLPSRGRLATLLVQKQLR*GRDTGQ
Trigger: CTGCCCAGTGTCCCTTCCCCATCTTAGCTGCTTCTG...CACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAGCATTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp AGGCCTCTGTTACAGTTTCCCTACCTCCTCTGCAGCAGCAGGACCTaGCTGACAGGGCAGATAAGCCACCTTTCAGTCCCTGTGGTCCCG +
Preference number: 2 (lower is better)
Translates to: RPLLQFPYLLCSSRT*LTGQISHLSVPVVP
Trigger: CGGGACCACAGGGACTGAAAGGTGGCTTATCTGCCCTGTCAGCAAGGTCCTGCTGCTGCAGAGGAGGTAGGGAAACTGTAACAGAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGCTGACATGCCATTTCTaGTCCAAGCCAAAGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVLTCHF*SKPKAS
Trigger: AGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAG...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTACAGAGGGAAAAACCTaGCAGGACACGGAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: DSHPAPHVGREARVPAHITEGKT*QDTEPL
Trigger: CAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGT...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp TCTAATGCTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGTTGCTGACTTGTGCCTaGCTCAGCAATGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: SNAVPHLPSRGRLATLLVLLTCA*LSNAQH
Trigger: GTGCTGAGCATTGCTGAGGCAGGCACAAGTCAGCAA...CACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAGCATTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCACTGAGGCAGGGAGCCTaGCACAGTGACCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PEALPLHSLLELQSYRNSLRQGA*HSDLQG
Trigger: GCCCTGCAGGTCACTGTGCCAGGCTCCCTGCCTCAG...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp TCTAATGCTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGGCAGGTCTTCAGGGCTaGTGTCTAGCCCAAGACTTT +
Preference number: 2 (lower is better)
Translates to: SNAVPHLPSRGRLATLLVAGLQG*CLAQDF
Trigger: AAAGTCTTGGGCTAGACACCAGCCCTGAAGACCTGC...CACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAGCATTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCACTGCACAGCCACTGTaGGGGAGGGCTGCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLTAQPL*GRAAKE
Trigger: CTCCTTGGCAGCCCTCCCCCACAGTGGCTGTGCAGT...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTCTGGGCCAGGCCAAATaGCAAACGAGAAGGAGTTCA +
Preference number: 2 (lower is better)
Translates to: DSHPAPHVGREARVPAHILGQAK*QTRRSS
Trigger: TGAACTCCTTCTCGTTTGTCATTTGGCCTGGCCCAG...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGGCCCAGAAGCTGTTTTaGAAACTTGGCCTTTTAGTG +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVAQKLF*KLGLLV
Trigger: CACTAAAAGGCCAAGTTTGCAAAACAGCTTCTGGGC...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGAAAGGTAGGATGGTGTaGTTGTACTCACCCTACAAG +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVKGRMV*LYSPYK
Trigger: CTTGTAGGGTGAGTACAAGCACACCATCCTACCTTT...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGCAGGCCGTGGGCTACTaGACTGGCTCTGCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEQAVGY*TGSAFS
Trigger: AGAGAAGGCAGAGCCAGTGCAGTAGCCCACGGCCTG...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGAAATGCATCTGCCTGTaGGTACACAGCACTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVKCICL*VHSTPF
Trigger: AAAGGGAGTGCTGTGTACCCACAGGCAGATGCATTT...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GATGCAGGCACAAATGCATCTGCCTGTGGGTACACAGCACTCCCTTaGGGACAGATCCTAGGGCTCACTACAGAAGCCTACCCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: DAGTNASACGYTALP*GQILGLTTEAYPQG
Trigger: TCCTTGGGGGTAGGCTTCTGTAGTGAGCCCTAGGATCTGTCCCAAAGGGAGTGCTGTGTACCCACAGGCAGATGCATTTGTGCCTGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp TCTAATGCTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGCACAGGCACTTGCCTTaGGTCACACAACTATTCAGA +
Preference number: 2 (lower is better)
Translates to: SNAVPHLPSRGRLATLLVHRHLP*VTQLFR
Trigger: TCTGAATAGTTGTGTGACCCAAGGCAAGTGCCTGTG...CACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAGCATTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGAGTCACATCCTTGATTaGTTTCTGTCCTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVSHILD*FLSFPT
Trigger: GGTAGGGAAGGACAGAAACCAATCAAGGATGTGACT...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GAGGGCGTCTGGCCACCCTTCTGGTGGTTTGGAGCAGCTGCAGCTTaGGCTGGAAAGTCAACCTCTACCCTTCACTTGATCTTAGCCAAA +
Preference number: 2 (lower is better)
Translates to: EGVWPPFWWFGAAAA*AGKSTSTLHLILAK
Trigger: TTTGGCTAAGATCAAGTGAAGGGTAGAGGTTGACTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTGGCCAGACGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp ACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTaGAGAGTCACCAGAGAAAAGACCTCGCCCAGACAGCCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TKAQRQSVTYPILHS*RVTREKTSPRQPEH
Trigger: GTGCTCTGGCTGTCTGGGCGAGGTCTTTTCTCTGGTGACTCTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAGCACACTCAAGAGCATaGGAGCCTGGGGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGAHSRA*EPGACC
Trigger: ACAGCAGGCCCCAGGCTCTCATGCTCTTGAGTGTGC...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCTTCCTATTCCTGCCCTaGCCAGAGGAGAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLFLFLP*PEESPP
Trigger: AGGTGGACTCTCCTCTGGGCAGGGCAGGAATAGGAA...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGGTGGGTCTAATGCTGTaGCCCACCTTCCCAGTAGAG +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEVGLML*PTFPVE
Trigger: CTCTACTGGGAAGGTGGGGCACAGCATTAGACCCAC...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCACTGCTCCATCCTCCTaGGCCTTAAGAAGCCCTTGG +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLTAPSS*ALRSPW
Trigger: CCAAGGGCTTCTTAAGGCCCAGGAGGATGGAGCAGT...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp TGGTCCCAGAAGACAGAGGGAAAAACCTGCCAGGACACGGAGCCCTaGGACTCTAGGGTTCATGCCTCAGAGGACAGAATTTACCAGATC +
Preference number: 2 (lower is better)
Translates to: WSQKTEGKTCQDTEP*DSRVHASEDRIYQI
Trigger: GATCTGGTAAATTCTGTCCTCTGAGGCATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGTCTTCTGGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAAGAGTCCCAGGGGAGTaGCAGCAAAGGTCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGRVPGE*QQRSVG
Trigger: TCCCACAGACCTTTGCTGTCACTCCCCTGGGACTCT...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGGCAAGACATCTGCTGTaGCATCCGGAAAGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEARHLL*HPESGV
Trigger: TACCCCACTTTCCGGATGTCACAGCAGATGTCTTGC...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGTATCTGGAAAGAACTTaGCTCTTTGATCTCCTTGTT +
Preference number: 2 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVYLERT*LFDLLV
Trigger: AACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATA...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCAAAAGGTGAGTCCCGGTaGCATGGAGTCTCCACTGTG +
Preference number: 2 (lower is better)
Translates to: PEALPLHSLLELQSYRNSKGESR*HGVSTV
Trigger: CACAGTGGAGACTCCATGCCACCGGGACTCACCTTT...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGTGCAGGGCAGGCTTTTaGAAACCCCCTCCAAGGATA +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLECRAGF*KPPPRI
Trigger: TATCCTTGGAGGGGGTTTCCAAAAGCCTGCCCTGCA...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCGCCCCCTTTCTGCCATaGCCTGTCAAAGCTCTAATC +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLAPFLP*PVKALI
Trigger: GATTAGAGCTTTGACAGGCCATGGCAGAAAGGGGGC...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTGCCAAAGCTAAAATATaGCTTCAATCCCATTTCAGA +
Preference number: 2 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCAKAKI*LQSHFR
Trigger: TCTGAAATGGGATTGAAGCCATATTTTAGCTTTGGC...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACTACCCCCAAGGACCTaGAGCTTCCAAGCCTGCACA +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGLPPRT*SFQACT
Trigger: TGTGCAGGCTTGGAAGCTCCAGGTCCTTGGGGGTAG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GAGCCCAGTTCCGCACAGGAAAGGCACAAAGGTAGGATGGTGTGCTaGTACTCACCCTACAAGGAGGCTCAAACCACACCCAAACCTAAT +
Preference number: 2 (lower is better)
Translates to: EPSSAQERHKGRMVC*YSPYKEAQTTPKPN
Trigger: ATTAGGTTTGGGTGTGGTTTGAGCCTCCTTGTAGGGTGAGTACAAGCACACCATCCTACCTTTGTGCCTTTCCTGTGCGGAACTGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp CGGACTCTGAAACAAGGAATCAGAGCCCACATGGCAAAAGAGAGTTaGCTTCTGAGGACAGGAAGGTGTCACAGCACAAGCCACAGCCGA +
Preference number: 2 (lower is better)
Translates to: RTLKQGIRAHMAKES*LLRTGRCHSTSHSR
Trigger: TCGGCTGTGGCTTGTGCTGTGACACCTTCCTGTCCTCAGAAGCAAACTCTCTTTTGCCATGTGGGCTCTGATTCCTTGTTTCAGAGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp TCTAATGCTGTGCCCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTGGTTTTACGTGGGTTATaGAACTTCATTCTCACAAGC +
Preference number: 2 (lower is better)
Translates to: SNAVPHLPSRGRLATLLVVLRGL*NFILTS
Trigger: GCTTGTGAGAATGAAGTTTCATAACCCACGTAAAAC...CACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGGGCACAGCATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGTCCAGAAAGATGCTGTaGAGTGAAAAGTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLESRKML*SEKSPA
Trigger: GGCTGGGGACTTTTCACTTCACAGCATCTTTCTGGA...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGGCCCCCAGTGATGTGGTGTaGACTGTGGGGGAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LSQSNTSRTLTYKMSSMAPSDVV*TVGEEL
Trigger: CAGCTCCTCCCCCACAGTGCACACCACATCACTGGG...GGCCATGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACCAGACCTCCCTCCTTaGTGCACTGACTCTGGCTAT +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGPDLPP*CTDSGY
Trigger: ATAGCCAGAGTCAGTGCAGCAAGGAGGGAGGTCTGG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCCCTAGGCCAGTGACTTaGGACCACATTCCTATTCCT +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLPRPVT*DHIPIP
Trigger: AGGAATAGGAATGTGGTCGCAAGTCACTGGCCTAGG...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGGCCTGGGCAGTGTGTaGACCACAGGCCATATGGAC +
Preference number: 2 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLGLGSV*TTGHMD
Trigger: GTCCATATGGCCTGTGGTCCACACACTGCCCAGGCC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp TCCCTGTCCACATTTCAGAGCCCAGAATGGATAGAGAAGTGGCTCTaGGGATTCAAGCCCTTAAAAGACAGCCCAGCTGCATGGAACCAC +
Preference number: 2 (lower is better)
Translates to: SLSTFQSPEWIEKWL*GFKPLKDSPAAWNH
Trigger: GTGGTTCCATGCAGCTGGGCTGTCTTTTAAGGGCTTGAATCCCAAGAGCCACTTCTCTATCCATTCTGGGCTCTGAAATGTGGACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGATGAGCCCCAAGAGATaGCCCTCTGAAAAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEMSPKR*PSEKVK
Trigger: TTTGACCTTTTCAGAGGGTCATCTCTTGGGGCTCAT...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGGCCGGGTCTTCAGCAGACTaGTCCATCCTCCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LSQSNTSRTLTYKMSSMAGSSAD*SILLGL
Trigger: AAGGCCCAGGAGGATGGAGCAGTCTGCTGAAGACCC...GGCCATGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CTTGGCTCTAGGAGCAATGGTTTCAGAGGTTCCCAGCCAGAAGGCACGTGTCCTTTTCAGAGCCCAGAATaGATAGAGAAGTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: LGSRSNGFRGSQPEGTCPFQSPE*IEKWLL
Trigger: CAAGAGCCACTTCTCTATCCATTCTGGGCTCTGAAA...AGGACACGTGCCTTCTGGCTGGGAACCTCTGAAACCATTGCTCCTAGAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp CCAGCCAGAGATCTAGATCAGAAATCTATAAGACAGTCAATGACCTaGTTCAACCCCTGGCCAGAGCACAGGCACTTGCCTTGGGTCACA +
Preference number: 2 (lower is better)
Translates to: PARDLDQKSIRQSMT*FNPWPEHRHLPWVT
Trigger: TGTGACCCAAGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAAGGTCATTGACTGTCTTATAGATTTCTGATCTAGATCTCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGATTAGCTCTTTGTGTGTaGCCACAGCACCCACACCAA +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGLALCV*PQHPHQ
Trigger: TTGGTGTGGGTGCTGTGGTCACACACAAAGAGCTAA...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCTTTGATCCACTGACATaGCATTTCTGCTCCAAGCCA +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLFDPLT*HFCSKP
Trigger: TGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAA...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAGGAACTTTAAGGGAATaGCATGTGGACTGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGGTLRE*HVDCGG
Trigger: GCCACCACAGTCCACATGGCATTCCCTTAAAGTTCC...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAGTGACATCCGGAAAGTaGGGTAAAGAGGAGGAACCT +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGVTSGK*GKEEEP
Trigger: AGGTTCCTCCTCTTTACCCCACTTTCCGGATGTCAC...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGGCCGTAGACAGAAGGGGGTaGTCCCAGAAGACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LSQSNTSRTLTYKMSSMAVDRRG*SQKTEG
Trigger: TCCCTCTGTCTTCTGGGACCACCCCCTTCTGTCTAC...GGCCATGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAAGTTCCCAGACACTCTaGGCTTTCTCCCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGSSQTL*AFSLFL
Trigger: GAGAAAGAGGGAGAAAGCCCAGAGTGTCTGGGAACT...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGTCCCCAGCTACACTaGGCTGGCCCAGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPCPQLH*AGPGVC
Trigger: ACACACACCTGGGCCAGCTCAGTGTAGCTGGGGACA...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCTTCACTTCTGTGCAGTaGAAAATCCCTGTCCACATT +
Preference number: 2 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLFTSVQ*KIPVHI
Trigger: AATGTGGACAGGGATTTTGCACTGCACAGAAGTGAA...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAACTGTGGGGGAGGGCTaGCAAGGAGGCAGGACAAGA +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPTVGEG*QGGRTR
Trigger: TCTTGTCCTGCCTCCTTGGCAGCCCTCCCCCACAGT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGGTGCCCACACTTCATaGGCAGAGGATGTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLGAHTS*AEDVSH
Trigger: GTGAGAAACATCCTCTGCCCATGAAGTGTGGGCACC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTTGGAGCTTCCAAGCCTaGACACTCAAGAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLWSFQA*TLKSMR
Trigger: TCTCATGCTCTTGAGTGTGCAGGCTTGGAAGCTCCA...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCACCAGAGGAAAAGGCCTaGGCAGTGTGTGGACCACAG +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPPEEKA*AVCGPQ
Trigger: CTGTGGTCCACACACTGCCCAGGCCTTTTCCTCTGG...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp AGAGGCCAAGCTTCACCTTTAATCAAGATCACTAGTGTGGCAGAATaGCTTCTAAACAGTATCCAGAGGAAAAGGCCTGGGCAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: RGQASPLIKITSVAE*LLNSIQRKRPGQCV
Trigger: CACACACTGCCCAGGCCTTTTCCTCTGGATACTGTTTAGAAGCAATTCTGCCACACTAGTGATCTTGATTAAAGGTGAAGCTTGGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GCCCCTAAAGATGGCAGAGCAGATATCTGGAAAGAACTTGACTCTTaGATCTCCTTGTTGAGCCATAGAATCAACCCTGGAACCAGAGAC +
Preference number: 2 (lower is better)
Translates to: APKDGRADIWKELDS*ISLLSHRINPGTRD
Trigger: GTCTCTGGTTCCAGGGTTGATTCTATGGCTCAACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATATCTGCTCTGCCATCTTTAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACCTTTCATTCCATATTaGACTACACCTCAGAGCTCA +
Preference number: 2 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGPFIPY*TTPQSS
Trigger: TGAGCTCTGAGGTGTAGTTCAATATGGAATGAAAGG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp CTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGGCCAAAGAGGTTCCTTTCTaGCCCTCAAGATCACCTTCC +
Preference number: 2 (lower is better)
Translates to: LSQSNTSRTLTYKMSSMAKEVPF*PSRSPS
Trigger: GGAAGGTGATCTTGAGGGTCAGAAAGGAACCTCTTT...GGCCATGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGGAGCCAGCCTATCTTaGCTTCTTTCTTTGATCCAC +
Preference number: 2 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLGASLS*LLSLIH
Trigger: GTGGATCAAAGAAAGAAGGCAAGATAGGCTGGCTCC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GGCAGAGCAGATATCTGGAAAGAACTTGACTCTTTGATCTCCTTGTaGAGCCATAGAATCAACCCTGGAACCAGAGACCTCCTGAATTCT +
Preference number: 2 (lower is better)
Translates to: GRADIWKELDSLISL*SHRINPGTRDLLNS
Trigger: AGAATTCAGGAGGTCTCTGGTTCCAGGGTTGATTCTATGGCTCAACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATATCTGCTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GATGGCAGAGCAGATATCTGGAAAGAACTTGACTCTTTGATCTCCTaGTTGAGCCATAGAATCAACCCTGGAACCAGAGACCTCCTGAAT +
Preference number: 2 (lower is better)
Translates to: DGRADIWKELDSLIS*LSHRINPGTRDLLN
Trigger: ATTCAGGAGGTCTCTGGTTCCAGGGTTGATTCTATGGCTCAACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATATCTGCTCTGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp TCTAAAGGACAGACATTAAAGAGGTTCCTTTCTGACCCTCAAGATCACCTTCCAAAAACTGGGCCTGGATaGGGCTCTGAAGAAGGAACT +
Preference number: 2 (lower is better)
Translates to: SKGQTLKRFLSDPQDHLPKTGPG*GSEEGT
Trigger: AGTTCCTTCTTCAGAGCCTCATCCAGGCCCAGTTTT...TGGAAGGTGATCTTGAGGGTCAGAAAGGAACCTCTTTAATGTCTGTCCTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAAGCCTCCATCTATTCTaGAGAAGAGGGTCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPSLHLF*RRGSWD
Trigger: GTCCCAGGACCCTCTTCTTCAGAATAGATGGAGGCT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGACAGCAAAGGTCTGTaGGACAGACAAAACAAAAGG +
Preference number: 2 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLDSKGL*DRQNKR
Trigger: CCTTTTGTTTTGTCTGTCCCACAGACCTTTGCTGTC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR TCA 90 bp ACAGAATTTACCAGATCAAAGGAAGCAAGACTAGCCATGCCCAATGCCCCCTTTCTTGCCTTCTTTCTTTaGTCCACTGACATGCCATTT +
Preference number: 2 (lower is better)
Translates to: TEFTRSKEARLAMPNAPFLAFFL*STDMPF
Trigger: AAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAG...AAAGGGGGCATTGGGCATGGCTAGTCTTGCTTCCTTTGATCTGGTAAATTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAACCTGTCTAAGGATCTaGCCAGAAGCTGTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPTCLRI*PEAVLQ
Trigger: TTGCAAAACAGCTTCTGGGCAGATCCTTAGACAGGT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAGTGAGAAGACACATATaGAAACTTCAAGCCCTACAG +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPVRRHI*KLQALQ
Trigger: CTGTAGGGCTTGAAGTTTCCATATGTGTCTTCTCAC...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 90 bp GAGAGGTTTGAGTTTGGCATTTCCTCCAACCAAGCTGGACTTTTATaGCATCTCTTTGATGATGTCTGTAGACGTTTGATTTCTACAGTT +
Preference number: 2 (lower is better)
Translates to: ERFEFGISSNQAGLL*HLFDDVCRRLISTV
Trigger: AACTGTAGAAATCAAACGTCTACAGACATCATCAAAGAGATGCAATAAAAGTCCAGCTTGGTTGGAGGAAATGCCAAACTCAAACCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR GCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCACTTTTTCCAGAAAGATaGTGTGAAGTGAAAAGTCCC +
Preference number: 2 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPLFPER*CEVKSP
Trigger: GGGACTTTTCACTTCACAGCATCTTTCTGGAAAAAG...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTCAGGACACGGAGCCCTaGGACTCTAGGGTTCATGCC +
Preference number: 3 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCQDTEP*DSRVHA
Trigger: GGCATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTG...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGCTTCCAAGCCTGCACACTCAAGAGCATGAGAGCCTaGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTC +
Preference number: 3 (lower is better)
Translates to: SFQACTLKSMRA*GLLSTPGKPEL
Trigger: GAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCTCTTGAGTGTGCAGGCTTGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp ACAAGCCACAGCCGACTCGATGCACAGCACAAGCTGTaGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCG +
Preference number: 3 (lower is better)
Translates to: TSHSRLDAQHKL*ATVRSRKCGHP
Trigger: CGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTGTGCTGTGCATCGAGTCGGCTGTGGCTTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CCCACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTaGTGGTTTGGAGCAGCTGCAGCTTTGGCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: PTFPVEGVWPPF*WFGAAAALAGK
Trigger: CTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGGATCTCCTCCTCTGCTaGGCTCTAGGAGCAATGGTT +
Preference number: 3 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVDLLLC*ALGAMV
Trigger: AACCATTGCTCCTAGAGCCAAGCAGAGGAGGAGATC...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGGATGTCCTTGCTGACTaGTGCCTGCCTCAGCAATGC +
Preference number: 3 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVDVLAD*CLPQQC
Trigger: GCATTGCTGAGGCAGGCACAAGTCAGCAAGGACATC...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp GTGTTGTCCGATCTCCCCCAGCAGGCCGTGGGCTACTaGACTGGCTCTGCCTTCTCTAGCTTTGTCGTCTCT +
Preference number: 3 (lower is better)
Translates to: VLSDLPQQAVGY*TGSAFSSFVVS
Trigger: AGAGACGACAAAGCTAGAGAAGGCAGAGCCAGTGCAGTAGCCCACGGCCTGCTGGGGGAGATCGGACAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTCACCCTTCTGGTGGTTaGGAGCAGCTGCAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: DSHPAPHVGREARVPAHIHPSGG*EQLQLW
Trigger: CCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTG...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCTTCCCTTTCCAGCTTaGGTTTACCTGAAGACATGC +
Preference number: 3 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVLPFPA*VYLKTC
Trigger: GCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp GCAGACTCAGTTAGTTCTCCCTGTCCCCAGCTACACTaGGCTGGCCCAGGTGTGTGTCGCAGGCTAACACCA +
Preference number: 3 (lower is better)
Translates to: ADSVSSPCPQLH*AGPGVCRRLTP
Trigger: TGGTGTTAGCCTGCGACACACACCTGGGCCAGCTCAGTGTAGCTGGGGACAGGGAGAACTAACTGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp CATTTGGGGACAGGTGGGCACTTATTCTCTACTTCCTaGGGCAGGGAGCCTGGCACAGTGACCTGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: HLGTGGHLFSTS*GREPGTVTCRA
Trigger: TGCCCTGCAGGTCACTGTGCCAGGCTCCCTGCCTCAGGAAGTAGAGAATAAGTGCCCACCTGTCCCCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp ACCTTCCCAGTAGAGGGCGTCTGGCCACCCTTCTGGTaGTTTGGAGCAGCTGCAGCTTTGGCTGGAAAGTCA +
Preference number: 3 (lower is better)
Translates to: TFPVEGVWPPFW*FGAAAALAGKS
Trigger: TGACTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGTGGCCAGACGCCCTCTACTGGGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp AGTGGGGTAAAGAGGAGGAACCTCGACAAGGTCAGGTaGCGAGTACAAACTGGGGCAATCCCACCACCTGGG +
Preference number: 3 (lower is better)
Translates to: SGVKRRNLDKVR*RVQTGAIPPPG
Trigger: CCCAGGTGGTGGGATTGCCCCAGTTTGTACTCGTCACCTGACCTTGTCGAGGTTCCTCCTCTTTACCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp CCTAAGACAGCACCTGAGATGCCGTGTGACCTGGAGTaGCAAGGGGAATGCTTGTCTGGACAGTCACCCTGC +
Preference number: 3 (lower is better)
Translates to: PKTAPEMPCDLE*QGECLSGQSPC
Trigger: GCAGGGTGACTGTCCAGACAAGCATTCCCCTTGTCACTCCAGGTCACACGGCATCTCAGGTGCTGTCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp AGAAGGGGGTGGTCCCAGAAGACAGAGGGAAAAACCTaGCAGGACACGGAGCCCTTGGACTCTAGGGTTCAT +
Preference number: 3 (lower is better)
Translates to: RRGWSQKTEGKT*QDTEPLDSRVH
Trigger: ATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGTCTTCTGGGACCACCCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CCTAGGGCTCACTACAGAAGCCTACCCCCAAGGACCTaGAGCTTCCAAGCCTGCACACTCAAGAGCATGAGA +
Preference number: 3 (lower is better)
Translates to: PRAHYRSLPPRT*SFQACTLKSMR
Trigger: TCTCATGCTCTTGAGTGTGCAGGCTTGGAAGCTCCAGGTCCTTGGGGGTAGGCTTCTGTAGTGAGCCCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACAAATCCCTCTCCCATaGCCCCCTCCCCTTCTCCGC +
Preference number: 3 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGQIPLP*PPPLLR
Trigger: GCGGAGAAGGGGAGGGGGCAATGGGAGAGGGATTTG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp TGGGCAGTGTGTGGACCACAGGCCATATGGACTAGGTaGTGGGCAGATGCAGGCACAAATGCATCTGCCTGT +
Preference number: 3 (lower is better)
Translates to: WAVCGPQAIWTR*WADAGTNASAC
Trigger: ACAGGCAGATGCATTTGTGCCTGCATCTGCCCATCACCTAGTCCATATGGCCTGTGGTCCACACACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp AAGGGAGCCCAGGAAAGATGGGCTGCAGGATATGTTTaGAGAGCTCATGTTACAGGGCCCAGACCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: KGAQERWAAGYV*RAHVTGPRPPS
Trigger: GGAGGGAGGTCTGGGCCCTGTAACATGAGCTCTTCAAACATATCCTGCAGCCCATCTTTCCTGGGCTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp GTGATGGGCAGATGCAGGCACAAATGCATCTGCCTGTaGGTACACAGCACTCCCTTTGGGACAGATCCTAGG +
Preference number: 3 (lower is better)
Translates to: VMGRCRHKCICL*VHSTPFGTDPR
Trigger: CCTAGGATCTGTCCCAAAGGGAGTGCTGTGTACCCACAGGCAGATGCATTTGTGCCTGCATCTGCCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TGCTGCACTGACTCTGGCTATCTGCAAAGGAGAGGGTaGCCCATGACTCAGCACGAATTCTGCAGAGTCACC +
Preference number: 3 (lower is better)
Translates to: CCTDSGYLQRRG*PMTQHEFCRVT
Trigger: GGTGACTCTGCAGAATTCGTGCTGAGTCATGGGCCACCCTCTCCTTTGCAGATAGCCAGAGTCAGTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TTTGTCGTCTCTGGATCCTCTACCCATGCTCCAGATTaGACCGGAGTCCCCCAGGAAGGGAGTAAGTGTTCG +
Preference number: 3 (lower is better)
Translates to: FVVSGSSTHAPD*TGVPQEGSKCS
Trigger: CGAACACTTACTCCCTTCCTGGGGGACTCCGGTCCAATCTGGAGCATGGGTAGAGGATCCAGAGACGACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CTTGGCTCTAGGAGCAATGGTTTCAGAGGTTCCCAGCCAGAAGGCACGTGTCCTAGACAGTCAATGACCTaGTTCAACCCCTGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: LGSRSNGFRGSQPEGTCPRQSMT*FNPWPE
Trigger: CTCTGGCCAGGGGTTGAACAAGGTCATTGACTGTCT...AGGACACGTGCCTTCTGGCTGGGAACCTCTGAAACCATTGCTCCTAGAGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp ACAAGCCCGAGCAAGGCTGGTATTCAAGTTAAAAGGTaGGTCCCGGTGGCATGGAGTCTCCACTGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: TSPSKAGIQVKR*VPVAWSLHCAC
Trigger: ACAGGCACAGTGGAGACTCCATGCCACCGGGACTCACCTTTTAACTTGAATACCAGCCTTGCTCGGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp GATAGGACCAAGGCCAGACAGGCCCCTGACATAAACTaGAGGAGGCTCCAGGGACAAGGATATTGGGACAGT +
Preference number: 3 (lower is better)
Translates to: DRTKARQAPDIN*RRLQGQGYWDS
Trigger: ACTGTCCCAATATCCTTGTCCCTGGAGCCTCCTTCAGTTTATGTCAGGGGCCTGTCTGGCCTTGGTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp CATCCGGTACCCCTGTGTGTGAGCTCAGTTCCCAGGTaGGAGAGCCTGACACTAGGAAGTCCTTTACTCACA +
Preference number: 3 (lower is better)
Translates to: HPVPLCVSSVPR*ESLTLGSPLLT
Trigger: TGTGAGTAAAGGACTTCCTAGTGTCAGGCTCTCTCACCTGGGAACTGAGCTCACACACAGGGGTACCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp TCCCAACACAAGGGACAGGCAGCATGGCCCGGACTCTaGAACAAGGAATCAGAGCCCACATGGCAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: SQHKGQAAWPGL*NKESEPTWQKR
Trigger: TCTCTTTTGCCATGTGGGCTCTGATTCCTTGTTTCAGAGTCCGGGCCATGCTGCCTGTCCCTTGTGTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CAGACTGCTCCATCCTCCTGGGCCTTAAGAAGCCCTTaGGTAATAAAACCAGACGGAAAGACTCTGGGTCCC +
Preference number: 3 (lower is better)
Translates to: QTAPSSWALRSP*VIKPDGKTLGP
Trigger: GGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCTTCTTAAGGCCCAGGAGGATGGAGCAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp GGAGTCTGGGGTCTTCAGCAGACTGCTCCATCCTCCTaGGCCTTAAGAAGCCCTTGGGTAATAAAACCAGAC +
Preference number: 3 (lower is better)
Translates to: GVWGLQQTAPSS*ALRSPWVIKPD
Trigger: GTCTGGTTTTATTACCCAAGGGCTTCTTAAGGCCCAGGAGGATGGAGCAGTCTGCTGAAGACCCCAGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACTGCAGGGCAGGCTTTaGGAAACCCCCTCCAAGGAT +
Preference number: 3 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGLQGRL*ETPSKD
Trigger: ATCCTTGGAGGGGGTTTCCAAAAGCCTGCCCTGCAG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGAGGCGCTCTTAGCTCTTaGTGTGTGACCACAGCACCC +
Preference number: 3 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGGALSS*CVTTAP
Trigger: GGGTGCTGTGGTCACACACAAAGAGCTAAGAGCGCC...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp AGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTaGGAGTCACCAGAGAAAAGACCTCGCCCAGACAGC +
Preference number: 3 (lower is better)
Translates to: RDSQSRTQYCTA*ESPEKRPRPDS
Trigger: GCTGTCTGGGCGAGGTCTTTTCTCTGGTGACTCTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp AGGACAGAAAAGGTGACACGACATGTACCCAGCTCTTaGAGTAAGAGTCTGACGCCCATCGGCCTCGGTTTT +
Preference number: 3 (lower is better)
Translates to: RTEKVTRHVPSS*SKSLTPIGLGF
Trigger: AAAACCGAGGCCGATGGGCGTCAGACTCTTACTGCAAGAGCTGGGTACATGTCGTGTCACCTTTTCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGACAGAGGGAAAAACCTGCCAGGACACGGAGCCCTTaGACTCTAGGGTTCATGCCTCAGAGGACAGAATTT +
Preference number: 3 (lower is better)
Translates to: RQREKPARTRSP*TLGFMPQRTEF
Trigger: AAATTCTGTCCTCTGAGGCATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TCAGATTCCACAGGGGCCCTGCCCTGCCTGACAAGTTaGATGAGAACTCATGAAGGACTAGCCATAGCTTCA +
Preference number: 3 (lower is better)
Translates to: SDSTGALPCLTS*MRTHEGLAIAS
Trigger: TGAAGCTATGGCTAGTCCTTCATGAGTTCTCATCCAACTTGTCAGGCAGGGCAGGGCCCCTGTGGAATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGCCCAGTTCCGCACAGGAAAGGCACAAAGGTAGGATaGTGTGCTTGTACTCACCCTACAAGGAGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: SPVPHRKGTKVG*CACTHPTRRLK
Trigger: TTTGAGCCTCCTTGTAGGGTGAGTACAAGCACACCATCCTACCTTTGTGCCTTTCCTGTGCGGAACTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACCAGGGACAAGGATATaGGGACAGTGGCGAGACAAC +
Preference number: 3 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGPGTRI*GQWRDN
Trigger: GTTGTCTCGCCACTGTCCCAATATCCTTGTCCCTGG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCAGGCCTTAAGAAGCCCTaGGGTAATAAAACCAGACGG +
Preference number: 3 (lower is better)
Translates to: PEALPLHSLLELQSYRNSGLKKP*GNKTRR
Trigger: CCGTCTGGTTTTATTACCCAAGGGCTTCTTAAGGCC...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACAGAATTTACCAGATCAAAGGAAGCAAGACTAGCCATGCCCAATGCCCCCTTTTGCAGCAGCAGGACCTaGCTGACAGGGCAGATAAGC +
Preference number: 3 (lower is better)
Translates to: TEFTRSKEARLAMPNAPFCSSRT*LTGQIS
Trigger: GCTTATCTGCCCTGTCAGCAAGGTCCTGCTGCTGCA...AAAGGGGGCATTGGGCATGGCTAGTCTTGCTTCCTTTGATCTGGTAAATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp GGAGCCAGCCTATCTTGCCTTCTTTCTTTGATCCACTaGCATGCCATTTCTGCTCCAAGCCAAAGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GASLSCLLSLIH*HAISAPSQRPL
Trigger: CAGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAGATAGGCTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp TCCAAGGATACAAGCAGCCCTTCTGTAATGGTCAGGTaGCCACACTTCATGGGCAGAGGATGTTTCTCACAG +
Preference number: 3 (lower is better)
Translates to: SKDTSSPSVMVR*PHFMGRGCFSQ
Trigger: CTGTGAGAAACATCCTCTGCCCATGAAGTGTGGGCACCTGACCATTACAGAAGGGCTGCTTGTATCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp AGTTCCGCACAGGAAAGGCACAAAGGTAGGATGGTGTaGTTGTACTCACCCTACAAGGAGGCTCAAACCACA +
Preference number: 3 (lower is better)
Translates to: SSAQERHKGRMV*LYSPYKEAQTT
Trigger: TGTGGTTTGAGCCTCCTTGTAGGGTGAGTACAAGCACACCATCCTACCTTTGTGCCTTTCCTGTGCGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp ACTCGAAGTCAAGAGATCCTAAGACAGCACCTGAGATaGCGTGTGACCTGGAGTGACAAGGGGAATGCTTGT +
Preference number: 3 (lower is better)
Translates to: TRSQEILRQHLR*RVTWSDKGNAC
Trigger: ACAAGCATTCCCCTTGTCACTCCAGGTCACACGGCATCTCAGGTGCTGTCTTAGGATCTCTTGACTTCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp ACTTGTCTCTCCCAGAAGCCCCTCCCTCAGTGCAGATaGCTGCCGAATGTTTATTACACGGCAACTGTAGAA +
Preference number: 3 (lower is better)
Translates to: TCLSQKPLPQCR*LPNVYYTATVE
Trigger: TTCTACAGTTGCCGTGTAATAAACATTCGGCAGGCATCTGCACTGAGGGAGGGGCTTCTGGGAGAGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TTGGGATTCAAGCCCTTAAAAGACAGCCCAGCTGCATaGAACCACAAGCCCGAGCAAGGCTGGTATTCAAGT +
Preference number: 3 (lower is better)
Translates to: LGFKPLKDSPAA*NHKPEQGWYSS
Trigger: ACTTGAATACCAGCCTTGCTCGGGCTTGTGGTTCCATGCAGCTGGGCTGTCTTTTAAGGGCTTGAATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TTGTTCAACCCCTGGCCAGAGCACAGGCACTTGCCTTaGGTCACACAACTATTCAGACATGCCATGTCTGTA +
Preference number: 3 (lower is better)
Translates to: LFNPWPEHRHLP*VTQLFRHAMSV
Trigger: TACAGACATGGCATGTCTGAATAGTTGTGTGACCCAAGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGAAATCTCCTGACCCAGTCTCTAGTCCTGACTAACTaGATAGGAGCCCAGTTCCGCACAGGAAAGGCACAA +
Preference number: 3 (lower is better)
Translates to: RNLLTQSLVLTN*IGAQFRTGKAQ
Trigger: TTGTGCCTTTCCTGTGCGGAACTGGGCTCCTATCCAGTTAGTCAGGACTAGAGACTGGGTCAGGAGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGGGGACTCAAGACCCTGGACCTGGTAATCAGGCAGTaGCTAAGAAACAACTGTGCAAGCATGCCAAAAGAC +
Preference number: 3 (lower is better)
Translates to: RGLKTLDLVIRQ*LRNNCASMPKD
Trigger: GTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGGTCCAGGGTCTTGAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp ACCCTTCTGGTGGTTTGGAGCAGCTGCAGCTTTGGCTaGAAAGTCAACCTCTACCCTTCACTTGATCTTAGC +
Preference number: 3 (lower is better)
Translates to: TLLVVWSSCSFG*KVNLYPSLDLS
Trigger: GCTAAGATCAAGTGAAGGGTAGAGGTTGACTTTCCAGCCAAAGCTGCAGCTGCTCCAAACCACCAGAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGTGCCCAGAAGCTGTTTaGCAAACTTGGCCTTTTAGT +
Preference number: 3 (lower is better)
Translates to: RDQSPETVSHVPNTAQLECPEAV*QTWPFS
Trigger: ACTAAAAGGCCAAGTTTGCAAAACAGCTTCTGGGCA...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp TGGGAAAGGCATAGTACCAGTAAGACTACCCTACTATaGGGCTTCTTGCCTGGAGCCAGCCTATCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: WERHSTSKTTLL*GFLPGASLSCL
Trigger: AAGGCAAGATAGGCTGGCTCCAGGCAAGAAGCCTCATAGTAGGGTAGTCTTACTGGTACTATGCCTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp CACGTGTCCTATTCAGGGCACAAAACTGGGCCTGGATaGGGCTCTGAAGAAGGAACTTTAAGGGAATGCCAT +
Preference number: 3 (lower is better)
Translates to: HVSYSGHKTGPG*GSEEGTLRECH
Trigger: ATGGCATTCCCTTAAAGTTCCTTCTTCAGAGCCTCATCCAGGCCCAGTTTTGTGCCCTGAATAGGACACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp GAATTCTGCAGAGTCACCGCTCAAGGACAGAAAAGGTaGCACGACATGTACCCAGCTCTTGCAGTAAGAGTC +
Preference number: 3 (lower is better)
Translates to: EFCRVTAQGQKR*HDMYPALAVRV
Trigger: GACTCTTACTGCAAGAGCTGGGTACATGTCGTGTCACCTTTTCTGTCCTTGAGCGGTGACTCTGCAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp ACATCTCCAATAAAGCAGGATGTCCTTGCTGACTTGTaGCTGCCTCAGCAATGCTCAGCACTATTCCTAGGC +
Preference number: 3 (lower is better)
Translates to: TSPIKQDVLADL*LPQQCSALFLG
Trigger: GCCTAGGAATAGTGCTGAGCATTGCTGAGGCAGGCACAAGTCAGCAAGGACATCCTGCTTTATTGGAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CACTCTTTCAAGCACTGTAATACATTTGGGGACAGGTaGGCACTTATTCTCTACTTCCTGAGGCAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: HSFKHCNTFGDR*ALILYFLRQGA
Trigger: GGCTCCCTGCCTCAGGAAGTAGAGAATAAGTGCCCACCTGTCCCCAAATGTATTACAGTGCTTGAAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp AGAATTGCTTCTAAACAGTATCCAGAGGAAAAGGCCTaGGCAGTGTGTGGACCACAGGCCATATGGACTAGG +
Preference number: 3 (lower is better)
Translates to: RIASKQYPEEKA*AVCGPQAIWTR
Trigger: CCTAGTCCATATGGCCTGTGGTCCACACACTGCCCAGGCCTTTTCCTCTGGATACTGTTTAGAAGCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CATCTAGAACAGTGTGTCAATCAGAAGCAGCTAAGATaGGGAAGGGACACTGGGCAGTGGAGTGAATCCTGT +
Preference number: 3 (lower is better)
Translates to: HLEQCVNQKQLR*GRDTGQWSESC
Trigger: ACAGGATTCACTCCACTGCCCAGTGTCCCTTCCCCATCTTAGCTGCTTCTGATTGACACACTGTTCTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp ACAGAGGCTCCTTGCTTCAGAACTAGGAGGCAGATGTaGGCAGCTGGTATCAAAATCAGAAATCTCCTGACC +
Preference number: 3 (lower is better)
Translates to: TEAPCFRTRRQM*AAGIKIRNLLT
Trigger: GGTCAGGAGATTTCTGATTTTGATACCAGCTGCCCACATCTGCCTCCTAGTTCTGAAGCAAGGAGCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp TCTTGCCTGGAGCCAGCCTATCTTGCCTTCTTTCTTTaGTCCACTGACATGCCATTTCTGCTCCAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: SCLEPAYLAFFL*STDMPFLLQAK
Trigger: TTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAGATAGGCTGGCTCCAGGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp CAAACACACAGCAAACAAGACGGCCTTCGGCAGGACTaGTACTCTCTGGCACATCCATATAATGGGATACAG +
Preference number: 3 (lower is better)
Translates to: QTHSKQDGLRQD*YSLAHPYNGIQ
Trigger: CTGTATCCCATTATATGGATGTGCCAGAGAGTATCAGTCCTGCCGAAGGCCGTCTTGTTTGCTGTGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp ATTGAACTACACCTCAGAGCTCATCAGCTAGATCTCTaGAAGACATCTGCTGTGACATCCGGAAAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: IELHLRAHQLDL*KTSAVTSGKWG
Trigger: ACCCCACTTTCCGGATGTCACAGCAGATGTCTTGCAGAGATCTAGCTGATGAGCTCTGAGGTGTAGTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp GCAAGACTAGCCATGCCCAATGCCCCCTTTCTGCCATaGCCTGTCAAAGCTCTAATCTCTCAACTTGTATTT +
Preference number: 3 (lower is better)
Translates to: ARLAMPNAPFLP*PVKALISQLVF
Trigger: AAATACAAGTTGAGAGATTAGAGCTTTGACAGGCCATGGCAGAAAGGGGGCATTGGGCATGGCTAGTCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TACCAGTATTCTCTGGTCTCTTCTGTCAAACATGCCTaGAATGGGGACAGTCCTGACGATCCACACCTTTTC +
Preference number: 3 (lower is better)
Translates to: YQYSLVSSVKHA*NGDSPDDPHLF
Trigger: GAAAAGGTGTGGATCGTCAGGACTGTCCCCATTCCAGGCATGTTTGACAGAAGAGACCAGAGAATACTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp ACCCTGCTAACTTCCCTTTCCAGCTTTGGTTTACCTGAAGACATGCTACGGGGACTCAAGACTTATAGTTaGCCTGCCATTTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: TLLTSLSSFGLPEDMLRGLKTYS*PAIFPF
Trigger: GAAGGGGAAAATGGCAGGCAAACTATAAGTCTTGAG...TCCCCGTAGCATGTCTTCAGGTAAACCAAAGCTGGAAAGGGAAGTTAGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTTGGAGCCAGCCTATCTaGCCTTCTTTCTTTGATCCA +
Preference number: 3 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLWSQPI*PSFFDP
Trigger: TGGATCAAAGAAAGAAGGCAAGATAGGCTGGCTCCA...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp TGGTCTAGCCCAGGCTCTAAGCCTTTCATTCCATATTaGACTACACCTCAGAGCTCATCAGCTAGATCTCTG +
Preference number: 3 (lower is better)
Translates to: WSSPGSKPFIPY*TTPQSSSARSL
Trigger: CAGAGATCTAGCTGATGAGCTCTGAGGTGTAGTTCAATATGGAATGAAAGGCTTAGAGCCTGGGCTAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp CAGCCTATCTTGCCTTCTTTCTTTGATCCACTGACATaGCATTTCTGCTCCAAGCCAAAGGCCTCTGTTACA +
Preference number: 3 (lower is better)
Translates to: QPILPSFFDPLT*HFCSKPKASVT
Trigger: TGTAACAGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAAGATAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp CATTTCAGAGCTGAAGAAGTTGCAGGTCTTCAGGGCTaGTGTCTAGCCCAAGACTTTATGAACACCAATGTG +
Preference number: 3 (lower is better)
Translates to: HFRAEEVAGLQG*CLAQDFMNTNV
Trigger: CACATTGGTGTTCATAAAGTCTTGGGCTAGACACCAGCCCTGAAGACCTGCAACTTCTTCAGCTCTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp ACAAGGCAAGAATCATGGCTATCTTCACATTATAGGTaGAGGGACCAAAGCCCAGAGACAGTCAGTCACGTA +
Preference number: 3 (lower is better)
Translates to: TRQESWLSSHYR*RDQSPETVSHV
Trigger: TACGTGACTGACTGTCTCTGGGCTTTGGTCCCTCCACCTATAATGTGAAGATAGCCATGATTCTTGCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGCCTTTCATTCCATATaGAACTACACCTCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLAFHSI*NYTSEL
Trigger: GAGCTCTGAGGTGTAGTTCAATATGGAATGAAAGGC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp TTGCCTTCTTTCTTTGATCCACTGACATGCCATTTCTaGTCCAAGCCAAAGGCCTCTGTTACAGTTTCCCTA +
Preference number: 3 (lower is better)
Translates to: LPSFFDPLTCHF*SKPKASVTVSL
Trigger: TAGGGAAACTGTAACAGAGGCCTTTGGCTTGGAGCAGAAATGGCATGTCAGTGGATCAAAGAAAGAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTACTAGTGTGGCAGAATaGCTTCTAAACAGTATCCAG +
Preference number: 3 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLTSVAE*LLNSIQ
Trigger: CTGGATACTGTTTAGAAGCAATTCTGCCACACTAGT...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR GCA 72 bp TACTTTCACAGGAAAGAAATCGGGATTTCACTTCTGTaGAGTGCAAAATCCCTGTCCACATTTCAGAGCCCA +
Preference number: 3 (lower is better)
Translates to: YFHRKEIGISLL*SAKSLSTFQSP
Trigger: TGGGCTCTGAAATGTGGACAGGGATTTTGCACTGCACAGAAGTGAAATCCCGATTTCTTTCCTGTGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR-3UTR CAA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAGGCTGCAGGATATGTTaGAAGAGCTCATGTTACAGG +
Preference number: 3 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPGCRIC*KSSCYR
Trigger: CCTGTAACATGAGCTCTTCAAACATATCCTGCAGCC...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp GTCAAAACCACAGATGTCATAAAGAGTCCACTAGTTTaGCCAGGCCAGAAGACACGAGATCAACATTATATT +
Preference number: 3 (lower is better)
Translates to: VKTTDVIKSPLV*PGQKTRDQHYI
Trigger: AATATAATGTTGATCTCGTGTCTTCTGGCCTGGCCAAACTAGTGGACTCTTTATGACATCTGTGGTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR TCA 72 bp AAGCTTAGTAGCACGCAGTCGATGCAGGTGTGGAAATaGACATTTTCAAGCATTGCAGATAAAAATCTTTTT +
Preference number: 3 (lower is better)
Translates to: KLSSTQSMQVWK*TFSSIADKNLF
Trigger: AAAAAGATTTTTATCTGCAATGCTTGAAAATGTTCATTTCCACACCTGCATCGACTGCGTGCTACTAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CCA 72 bp TATGAAACTTCATTCTCACAAGCCAAAGCTAAAATATaGCTTCAATCCCATTTCAGAGCTGAAGAAGTTGCA +
Preference number: 3 (lower is better)
Translates to: YETSFSQAKAKI*LQSHFRAEEVA
Trigger: TGCAACTTCTTCAGCTCTGAAATGGGATTGAAGCCATATTTTAGCTTTGGCTTGTGAGAATGAAGTTTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTCCGGCCTCACCCTGCTaGGCCCGCCATACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCPASPC*ARHTVL
Trigger: CAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGG...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp GACGGAAAGACTCTGGGTCCCTCTCCCCACCCAAATCTACTGGTCCCCACAGCCGCACAGCTGCCACGCTaGGGGCCCGTAGGCGACACA +
Preference number: 4 (lower is better)
Translates to: DGKTLGPSPHPNLLVPTAAQLPR*GPVGDT
Trigger: TGTGTCGCCTACGGGCCCCCAGCGTGGCAGCTGTGC...GGCTGTGGGGACCAGTAGATTTGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCTGGCAGGCAGGGCATaGCAGCAGCTACCAGCTACA +
Preference number: 4 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVLAGRA*QQLPAT
Trigger: TGTAGCTGGTAGCTGCTGCCATGCCCTGCCTGCCAG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGAGGCGCTTCCAGGGATaGGCTGGTAGCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVRRFQG*AGSHSL
Trigger: AAGGCTGTGGCTACCAGCCCATCCCTGGAAGCGCCT...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTCAGCCTGTGATGCAGTaGTTGCAGTCTGCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCQPVMQ*LQSARA
Trigger: AGCACGCGCAGACTGCAAGCACTGCATCACAGGCTG...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGAGCCAAATCGGTGGCTaGGGTCATGGTCCACACATC +
Preference number: 4 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVSQIGG*GHGPHI
Trigger: GATGTGTGGACCATGACCTCAGCCACCGATTTGGCT...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCTCCGCAGTGACTGCATaGCCGCCCGCAGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLSAVTA*PPAEGP
Trigger: GGGGCCCTCTGCGGGCGGTCATGCAGTCACTGCGGA...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp GACGGAAAGACTCTGGGTCCCTCTCCCCACCCAAATCTACTGGTCCCCACAGCCCGAAGCTCTGGCTTCTaGTCCCGGCCTTCACACAGC +
Preference number: 4 (lower is better)
Translates to: DGKTLGPSPHPNLLVPTARSSGF*SRPSHS
Trigger: GCTGTGTGAAGGCCGGGAGCAGAAGCCAGAGCTTCG...GGCTGTGGGGACCAGTAGATTTGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTTGCTGCTGGCACTCTTaGGAAGCTCTGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCCCWHS*EALASA
Trigger: AGCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCA...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCGGTGGCTGAGGTCATaGTCCACACATCTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVRWLRS*STHLWS
Trigger: GGACCAAAGATGTGTGGACCATGACCTCAGCCACCG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGCATGAGAGCCTGGGGCCTGCTGTCCACCCCGGGAAAGCCCGAACTCTGCTGTACACATTACCAACAGTaGTGCTCCTCCAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SMRAWGLLSTPGKPELCCTHYQQ*CSSSGL
Trigger: GAGGCCACTGGAGGAGCAGCACTGTTGGTAATGTGT...ACAGCAGAGTTCGGGCTTTCCCGGGGTGGACAGCAGGCCCCAGGCTCTCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTTGGGAAAGGCCAGGATaGCTCTGGCAGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: DSHPAPHVGREARVPAHIWERPG*LWQAGH
Trigger: ATGCCCTGCCTGCCAGAGGCATCCTGGCCTTTCCCA...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp GACGGAAAGACTCTGGGTCCCTCTCCCCACCCAAATCTACTGGTCCCCACAGCCCTGGCTGGTGCCTGCTaGAGCTGCTCAAACTGCATC +
Preference number: 4 (lower is better)
Translates to: DGKTLGPSPHPNLLVPTALAGAC*SCSNCI
Trigger: GATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAG...GGCTGTGGGGACCAGTAGATTTGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGCCCTTGGGTAATAAAACCAGACGGAAAGACTCTGGGTCCCTCTCCCCACCCAGGTGCAAAGCAGAGCTaGCGGAGGCAGAGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPWVIKPDGKTLGPSPHPGAKQS*RRQSVA
Trigger: TGCCACGCTCTGCCTCCGGCAGCTCTGCTTTGCACC...TGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp GACAGTCACCCTGCCCCTCATGTAGGCAGAGAAGCCAGGGTGCCAGCTCACATTACTCTTGCGAAGCTCTaGCTTCTGCTCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DSHPAPHVGREARVPAHITLAKL*LLLPAF
Trigger: GAAGGCCGGGAGCAGAAGCCAGAGCTTCGCAAGAGT...AATGTGAGCTGGCACCCTGGCTTCTCTGCCTACATGAGGGGCAGGGTGACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp AGCCCTTGGGTAATAAAACCAGACGGAAAGACTCTGGGTCCCTCTCCCCACCCAAGCCCTGTGGACAGGTaGGCTGCCAAGGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SPWVIKPDGKTLGPSPHPSPVDR*AAKGRT
Trigger: TGTTCTGCCCTTGGCAGCTCACCTGTCCACAGGGCT...TGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp GACGGAAAGACTCTGGGTCCCTCTCCCCACCCAAATCTACTGGTCCCCACAGCCTGCAGCTGCTCAAACTaGATCTCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DGKTLGPSPHPNLLVPTACSCSN*ISRCFW
Trigger: CCAGAAGCACCTGGAGATGCAGTTTGAGCAGCTGCA...GGCTGTGGGGACCAGTAGATTTGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CCCTCAACATGCTGGCCTAAGTCAACCACTGTGAGCATCTCTCCTCCTCTTCTCTGGACGGGGACTCTGTaGTTCCCGGGCACCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PSTCWPKSTTVSISPPLLWTGTL*FPGTWF
Trigger: GAACCAGGTGCCCGGGAACCACAGAGTCCCCGTCCA...GAGAAGAGGAGGAGAGATGCTCACAGTGGTTGACTTAGGCCAGCATGTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGCCCTTGGGTAATAAAACCAGACGGAAAGACTCTGGGTCCCTCTCCCCACCCACTGACGCCACCAGCTTaGGAAAGGCCAGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: SPWVIKPDGKTLGPSPHPLTPPA*ERPGCL
Trigger: GAGGCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAG...TGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp CTTGGCTCTAGGAGCAATGGTTTCAGAGGTTCCCAGCCAGAAGGCACGTGTCCTTCACTGGCTGGTGCCTaGTGCAGCTGCTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LGSRSNGFRGSQPEGTCPSLAGA*CSCSNC
Trigger: GCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGA...AGGACACGTGCCTTCTGGCTGGGAACCTCTGAAACCATTGCTCCTAGAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCAGGGTGGACACAACAGTaGGGGTGCCCAGAAATCCCC +
Preference number: 4 (lower is better)
Translates to: PEALPLHSLLELQSYRNSGWTQQ*GCPEIP
Trigger: GGGGATTTCTGGGCACCCTCACTGTTGTGTCCACCC...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGCCAGACAACTTACAGTaGAATTTCATCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVPDNLQ*NFIPHW
Trigger: CCAGTGTGGGATGAAATTCCACTGTAAGTTGTCTGG...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp CCGTGGGCTACTGCACTGGCTCTGCCTTCTCTAGCTTaGTCGTCTCTGGATCCTCTACCCATGCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: PWATALALPSLA*SSLDPLPMLQI
Trigger: AATCTGGAGCATGGGTAGAGGATCCAGAGACGACAAAGCTAGAGAAGGCAGAGCCAGTGCAGTAGCCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp ATCGGGATTTCACTTCTGTGCAGTGCAAAATCCCTGTCCACATTTCAGAGCCCAGTTGGCACCCACACCTaGCTCTCCCCCAACGTGCAG +
Preference number: 4 (lower is better)
Translates to: IGISLLCSAKSLSTFQSPVGTHT*LSPNVQ
Trigger: CTGCACGTTGGGGGAGAGTCAGGTGTGGGTGCCAAC...TGGGCTCTGAAATGTGGACAGGGATTTTGCACTGCACAGAAGTGAAATCCCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGGGACCAAAGCCCAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTTGAGATCCCACACTGGGCCTaGAACCCAGACTCACTGACT +
Preference number: 4 (lower is better)
Translates to: RDQSPETVSHVPNTAQLEIPHWA*NPDSLT
Trigger: AGTCAGTGAGTCTGGGTTGCAGGCCCAGTGTGGGAT...CTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTGGGCTTTGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CGAGCAAGGCTGGTATTCAAGTTAAAAGGTGAGTCCCGGTGGCATGGAGTCTCCCAGAACAGCTCAGACTaGGCTTCTGAACGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RARLVFKLKGESRWHGVSQNSSD*ASERRH
Trigger: ATGGCGGCGTTCAGAAGCCCAGTCTGAGCTGTTCTG...GGAGACTCCATGCCACCGGGACTCACCTTTTAACTTGAATACCAGCCTTGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp ACAGAATTTACCAGATCAAAGGAAGCAAGACTAGCCATGCCCAATGCCCCCTTTGGGGTCTGGCCTCCTTaGCCAGCAACACTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TEFTRSKEARLAMPNAPFGVWPP*PATLPG
Trigger: GCCTGGCAGTGTTGCTGGCCAAGGAGGCCAGACCCC...AAAGGGGGCATTGGGCATGGCTAGTCTTGCTTCCTTTGATCTGGTAAATTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp ATCGGGATTTCACTTCTGTGCAGTGCAAAATCCCTGTCCACATTTCAGAGCCCAAGGGGTGCAGGGGTCTaGCCTCCTTGGCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: IGISLLCSAKSLSTFQSPRGAGV*PPWPAT
Trigger: TGTTGCTGGCCAAGGAGGCCAGACCCCTGCACCCCT...TGGGCTCTGAAATGTGGACAGGGATTTTGCACTGCACAGAAGTGAAATCCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp ACAGAATTTACCAGATCAAAGGAAGCAAGACTAGCCATGCCCAATGCCCCCTTTAGGCCAGGATGCCTCTaGCAGGCAGGGCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: TEFTRSKEARLAMPNAPFRPGCL*QAGHGS
Trigger: GCTGCCATGCCCTGCCTGCCAGAGGCATCCTGGCCT...AAAGGGGGCATTGGGCATGGCTAGTCTTGCTTCCTTTGATCTGGTAAATTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp TTAGCATCTTCACCTTTCCCTGGCGCTCTTAGCTCTTaGTGTGTGACCACAGCACCCACACCAACCCCATGC +
Preference number: 4 (lower is better)
Translates to: LASSPFPGALSS*CVTTAPTPTPC
Trigger: GCATGGGGTTGGTGTGGGTGCTGTGGTCACACACAAAGAGCTAAGAGCGCCAGGGAAAGGTGAAGATGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp AAAGGGAGCCCAGGAAAGATGGGCTGCAGGATATGTTaGAAGAGCTCATGTTACAGGGCCCAGACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KGSPGKMGCRIC*KSSCYRAQTSL
Trigger: GAGGGAGGTCTGGGCCCTGTAACATGAGCTCTTCAAACATATCCTGCAGCCCATCTTTCCTGGGCTCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp TCCGCACAGGAAAGGCACAAAGGTAGGATGGTGTGCTaGTACTCACCCTACAAGGAGGCTCAAACCACACCC +
Preference number: 4 (lower is better)
Translates to: SAQERHKGRMVC*YSPYKEAQTTP
Trigger: GGGTGTGGTTTGAGCCTCCTTGTAGGGTGAGTACAAGCACACCATCCTACCTTTGTGCCTTTCCTGTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCACCCCAACGTGCAGGCTaGTTTAGAAGTCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: PEALPLHSLLELQSYRNSPQRAG*FRSPIL
Trigger: GAGGATGGGACTTCTAAATCAGCCTGCACGTTGGGG...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCACATTACCAACAGTGCTaGTCCTCCAGTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PEALPLHSLLELQSYRNSHYQQC*SSSGLQ
Trigger: CTGGAGGCCACTGGAGGAGCAGCACTGTTGGTAATG...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp CGAGCAAGGCTGGTATTCAAGTTAAAAGGTGAGTCCCGGTGGCATGGAGTCTCCAACTGCATCTCCAGGTaGTTCTGGATGGCAATGCCG +
Preference number: 4 (lower is better)
Translates to: RARLVFKLKGESRWHGVSNCISR*FWMAMP
Trigger: CGGCATTGCCATCCAGAAGCACCTGGAGATGCAGTT...GGAGACTCCATGCCACCGGGACTCACCTTTTAACTTGAATACCAGCCTTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CGAGCAAGGCTGGTATTCAAGTTAAAAGGTGAGTCCCGGTGGCATGGAGTCTCCTGGTCCACACATCTTTaGTCCTGGAGCCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: RARLVFKLKGESRWHGVSWSTHL*SWSQTL
Trigger: CAGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCA...GGAGACTCCATGCCACCGGGACTCACCTTTTAACTTGAATACCAGCCTTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp CTTGTTCAACCCCTGGCCAGAGCACAGGCACTTGCCTaGGGTCACACAACTATTCAGACATGCCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVQPLARAQALA*GHTTIQTCHVC
Trigger: ACAGACATGGCATGTCTGAATAGTTGTGTGACCCAAGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp ATGACCTTGTTCAACCCCTGGCCAGAGCACAGGCACTaGCCTTGGGTCACACAACTATTCAGACATGCCATG +
Preference number: 4 (lower is better)
Translates to: MTLFNPWPEHRH*PWVTQLFRHAM
Trigger: CATGGCATGTCTGAATAGTTGTGTGACCCAAGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAAGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp AAGACAGAGGGAAAAACCTGCCAGGACACGGAGCCCTaGGACTCTAGGGTTCATGCCTCAGAGGACAGAATT +
Preference number: 4 (lower is better)
Translates to: KTEGKTCQDTEP*DSRVHASEDRI
Trigger: AATTCTGTCCTCTGAGGCATGAACCCTAGAGTCCAAGGGCTCCGTGTCCTGGCAGGTTTTTCCCTCTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp CAGAGACAGTCAGTCACGTACCCAATACTGCACAGCTaGAGAGTCACCAGAGAAAAGACCTCGCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: QRQSVTYPILHS*RVTREKTSPRQ
Trigger: CTGTCTGGGCGAGGTCTTTTCTCTGGTGACTCTCAAGCTGTGCAGTATTGGGTACGTGACTGACTGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTACAGGCTGTCCTCACTaGCTGGTGCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLTGCPH*LVPAAA
Trigger: AGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGT...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp CCTGGTAATCAGGCAGTGGCTAAGAAACAACTGTGCAAGCATGCCAAAAGACTTGCTTCTGGATGGCAATaGCGAGCACCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGNQAVAKKQLCKHAKRLASGWQ*RAPQGP
Trigger: TGGACCCTGAGGTGCTCGGCATTGCCATCCAGAAGC...AAGTCTTTTGGCATGCTTGCACAGTTGTTTCTTAGCCACTGCCTGATTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAGCCGGAGGCAGAGCGTaGCAGGAAGTGGTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPAGGRA*QEVVGG
Trigger: GCCACCTACCACTTCCTGCCACGCTCTGCCTCCGGC...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAGTCACTCTGCAGGGGTaGAGGGGTCTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPVTLQG*RGLASL
Trigger: CAAGGAGGCCAGACCCCTGCACCCCTGCAGAGTGAC...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAGCTGTCCTCACTGGCTaGTGCCTGCTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPAVLTG*CLLQLL
Trigger: GAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGC...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp TCTAAAGGACAGACATTAAAGAGGTTCCTTTCTGACCCTCAAGATCACCTTCCAGGTGCCTGCTGCAGCTaGTCAAACTGCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKGQTLKRFLSDPQDHLPGACCS*SNCISR
Trigger: CCTGGAGATGCAGTTTGAGCAGCTGCAGCAGGCACC...TGGAAGGTGATCTTGAGGGTCAGAAAGGAACCTCTTTAATGTCTGTCCTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp ACATTTCAGAGCCCAGAATGGATAGAGAAGTGGCTCTaGGGATTCAAGCCCTTAAAAGACAGCCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TFQSPEWIEKWL*GFKPLKDSPAA
Trigger: TGCAGCTGGGCTGTCTTTTAAGGGCTTGAATCCCAAGAGCCACTTCTCTATCCATTCTGGGCTCTGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp AAACAAGGAATCAGAGCCCACATGGCAAAAGAGAGTTaGCTTCTGAGGACAGGAAGGTGTCACAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: KQGIRAHMAKES*LLRTGRCHSTS
Trigger: GCTTGTGCTGTGACACCTTCCTGTCCTCAGAAGCAAACTCTCTTTTGCCATGTGGGCTCTGATTCCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAAAGCTGGAAGAACTCTaGGACAGGGCCTGTGGACGG +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPKLEEL*DRACGR
Trigger: CCGTCCACAGGCCCTGTCTCAGAGTTCTTCCAGCTT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp TCTAAAGGACAGACATTAAAGAGGTTCCTTTCTGACCCTCAAGATCACCTTCCACCAGAGCCAAATCGGTaGCTGAGGTCATGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SKGQTLKRFLSDPQDHLPPEPNR*LRSWST
Trigger: TGTGGACCATGACCTCAGCCACCGATTTGGCTCTGG...TGGAAGGTGATCTTGAGGGTCAGAAAGGAACCTCTTTAATGTCTGTCCTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR GCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAACACCTCCCATGTCATaGCCTCGGCATCCCATCGTA +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPTPPMS*PRHPIV
Trigger: TACGATGGGATGCCGAGGGCATGACATGGGAGGTGT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCATGTACCAAGTCTGAGTaGCTCCTCTGCACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPCTKSE*LLCTAA
Trigger: GGCAGCTGTGCAGAGGAGCCACTCAGACTTGGTACA...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp GATCTAGATCAGAAATCTATAAGACAGTCAATGACCTaGTTCAACCCCTGGCCAGAGCACAGGCACTTGCCT +
Preference number: 4 (lower is better)
Translates to: DLDQKSIRQSMT*FNPWPEHRHLP
Trigger: AGGCAAGTGCCTGTGCTCTGGCCAGGGGTTGAACAAGGTCATTGACTGTCTTATAGATTTCTGATCTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR TCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCAACTATGTACCAAGTCTaGGTGGCTCCTCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPTMYQV*VAPLHS
Trigger: GCTGTGCAGAGGAGCCACTCAGACTTGGTACATAGT...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp AAAACATCTCCAATAAAGCAGGATGTCCTTGCTGACTaGTGCCTGCCTCAGCAATGCTCAGCACTATTCCTA +
Preference number: 4 (lower is better)
Translates to: KTSPIKQDVLAD*CLPQQCSALFL
Trigger: TAGGAATAGTGCTGAGCATTGCTGAGGCAGGCACAAGTCAGCAAGGACATCCTGCTTTATTGGAGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CCA 90 bp AGAAACTCTCCCAAAGTAACACATCCAGGACGCTTACATACAAAATGTCATCCACTTCACACAGCAAGCTaGAAGAACTCTGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: RNSPKVTHPGRLHTKCHPLHTAS*KNSETG
Trigger: CCCTGTCTCAGAGTTCTTCCAGCTTGCTGTGTGAAG...TGGATGACATTTTGTATGTAAGCGTCCTGGATGTGTTACTTTGGGAGAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp GCTTCACCTTTAATCAAGATCACTAGTGTGGCAGAATaGCTTCTAAACAGTATCCAGAGGAAAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASPLIKITSVAE*LLNSIQRKRPG
Trigger: CCCAGGCCTTTTCCTCTGGATACTGTTTAGAAGCAATTCTGCCACACTAGTGATCTTGATTAAAGGTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp GATATCTGGAAAGAACTTGACTCTTTGATCTCCTTGTaGAGCCATAGAATCAACCCTGGAACCAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: DIWKELDSLISL*SHRINPGTRDL
Trigger: GAGGTCTCTGGTTCCAGGGTTGATTCTATGGCTCAACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp GATGGCAGAGCAGATATCTGGAAAGAACTTGACTCTTaGATCTCCTTGTTGAGCCATAGAATCAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: DGRADIWKELDS*ISLLSHRINPG
Trigger: TCCAGGGTTGATTCTATGGCTCAACAAGGAGATCAAAGAGTCAAGTTCTTTCCAGATATCTGCTCTGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp AGATCTACCTGTCTAAGGATCTGCCCAGAAGCTGTTTaGCAAACTTGGCCTTTTAGTGTGTGTCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RSTCLRICPEAV*QTWPFSVCPKK
Trigger: TTTCTTTGGACACACACTAAAAGGCCAAGTTTGCAAAACAGCTTCTGGGCAGATCCTTAGACAGGTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp GAGTTTGGCATTTCCTCCAACCAAGCTGGACTTTTATaGCATCTCTTTGATGATGTCTGTAGACGTTTGATT +
Preference number: 4 (lower is better)
Translates to: EFGISSNQAGLL*HLFDDVCRRLI
Trigger: AATCAAACGTCTACAGACATCATCAAAGAGATGCAATAAAAGTCCAGCTTGGTTGGAGGAAATGCCAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
3UTR CAA 72 bp CTTTTATTGCATCTCTTTGATGATGTCTGTAGACGTTaGATTTCTACAGTTCAAACACACAGCAAACAAGAC +
Preference number: 4 (lower is better)
Translates to: LLLHLFDDVCRR*ISTVQTHSKQD
Trigger: GTCTTGTTTGCTGTGTGTTTGAACTGTAGAAATCAAACGTCTACAGACATCATCAAAGAGATGCAATAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp GGAGCCGCTCCAGAGCAGCCACAGCAGCTGGGTCTCCGCAGTGACTaGATGACCGCCCGCAGAGGGCCCCTCCGGCCCTCCGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: GAAPEQPQQLGLRSD*MTARRGPLRPSADR
Trigger: CCTGTCTGCGGAGGGCCGGAGGGGCCCTCTGCGGGCGGTCATGCAGTCACTGCGGAGACCCAGCTGCTGTGGCTGCTCTGGAGCGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 90 bp TTCTGGAGCCGCTCCAGAGCAGCCACAGCAGCTGGGTCTCCGCAGTaGCTGCATGACCGCCCGCAGAGGGCCCCTCCGGCCCTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: FWSRSRAATAAGSPQ*LHDRPQRAPPALRR
Trigger: TCTGCGGAGGGCCGGAGGGGCCCTCTGCGGGCGGTCATGCAGTCACTGCGGAGACCCAGCTGCTGTGGCTGCTCTGGAGCGGCTCCAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp GCAGTCTGCGCGTGCTCTGGGATCTCAGTCTGGCACGCCTCCTCCTaGAGGATCCGGGGACTAGAACCGGCCTCACCCTGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: AVCACSGISVWHASS*RIRGLEPASPCWAR
Trigger: GCGGGCCCAGCAGGGTGAGGCCGGTTCTAGTCCCCGGATCCTGCAGGAGGAGGCGTGCCAGACTGAGATCCCAGAGCACGCGCAGACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 90 bp CTCAGGCGCTTCCAGGGATGGGCTGGTAGCCACAGCCTTGCAGGCTaGCGCGGGAGCTGCCTGAACCCCGGCATCCTGAGCCGATGCCAC +
Preference number: 5 (lower is better)
Translates to: LRRFQGWAGSHSLAG*RGSCLNPGILSRCH
Trigger: GTGGCATCGGCTCAGGATGCCGGGGTTCAGGCAGCTCCCGCGGCAGCCTGCAAGGCTGTGGCTACCAGCCCATCCCTGGAAGCGCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp CAGGGATGGGCTGGTAGCCACAGCCTTGCAGGCTGCCGCGGGAGCTaGCTGAACCCCGGCATCCTGAGCCGATGCCACACCCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: QGWAGSHSLAGCRGS*LNPGILSRCHTQSQ
Trigger: TTGGCTCTGGGTGTGGCATCGGCTCAGGATGCCGGGGTTCAGGCAGCTCCCGCGGCAGCCTGCAAGGCTGTGGCTACCAGCCCATCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp CCCGCAGAGGGCCCCTCCGGCCCTCCGCAGACAGGCTGTCCTCACTaGCTGGTGCCTGCTGCAGCTGCTCAAACTGCATCTCCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: PAEGPSGPPQTGCPH*LVPAAAAQTASPGA
Trigger: AGCACCTGGAGATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGTCTGCGGAGGGCCGGAGGGGCCCTCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp GCCTCCTCCTGCAGGATCCGGGGACTAGAACCGGCCTCACCCTGCTaGGCCCGCCATACAGTGCTGCTGGCACTCTTGCGAAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: ASSCRIRGLEPASPC*ARHTVLLALLRSSG
Trigger: GCCAGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGGTTCTAGTCCCCGGATCCTGCAGGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS-3UTR CAA 90 bp CAAGCTGTGGGCCACGGTGAGGAGCAGGAAGTGTGGCCATCCGGTACCCCTGTGCTGGTAGCCACAGCCTaGCAGGCTGCCGCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QAVGHGEEQEVWPSGTPVLVATA*QAAAGA
Trigger: AGCTCCCGCGGCAGCCTGCAAGGCTGTGGCTACCAG...CACAGGGGTACCGGATGGCCACACTTCCTGCTCCTCACCGTGGCCCACAGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp CACGCCTCCTCCTGCAGGATCCGGGGACTAGAACCGGCCTCACCCTaGTGGGCCCGCCATACAGTGCTGCTGGCACTCTTGCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: HASSCRIRGLEPASP*WARHTVLLALLRSS
Trigger: AGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGGTTCTAGTCCCCGGATCCTGCAGGAGGAGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 90 bp TGGCCTCCAGCCCCAGCCTGTGATGCAGTGCTTGCAGTCTGCGCGTaGTCTGGGATCTCAGTCTGGCACGCCTCCTCCTGCAGGATCCGG +
Preference number: 5 (lower is better)
Translates to: WPPAPACDAVLAVCA*SGISVWHASSCRIR
Trigger: CCGGATCCTGCAGGAGGAGGCGTGCCAGACTGAGATCCCAGAGCACGCGCAGACTGCAAGCACTGCATCACAGGCTGGGGCTGGAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 90 bp CTCCAGTGGCCTCCAGCCCCAGCCTGTGATGCAGTGCTTGCAGTCTaGGCGTGCTCTGGGATCTCAGTCTGGCACGCCTCCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LQWPPAPACDAVLAV*ACSGISVWHASSCR
Trigger: CCTGCAGGAGGAGGCGTGCCAGACTGAGATCCCAGAGCACGCGCAGACTGCAAGCACTGCATCACAGGCTGGGGCTGGAGGCCACTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 90 bp CAGAGGGCCCCTCCGGCCCTCCGCAGACAGGCTGTCCTCACTGGCTaGTGCCTGCTGCAGCTGCTCAAACTGCATCTCCAGGTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QRAPPALRRQAVLTG*CLLQLLKLHLQVLL
Trigger: CAGAAGCACCTGGAGATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGTCTGCGGAGGGCCGGAGGGGCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp GCAGCAGCTACCAGCTACAGCCTCCCCCAGGGTGCAAAGCAGAGCTaGCGGAGGCAGAGCGTGGCAGGAAGTGGTAGGTGGCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: AAATSYSLPQGAKQS*RRQSVAGSGRWLSS
Trigger: ACTGGACAGCCACCTACCACTTCCTGCCACGCTCTGCCTCCGGCAGCTCTGCTTTGCACCCTGGGGGAGGCTGTAGCTGGTAGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp AGGGCCCCTCCGGCCCTCCGCAGACAGGCTGTCCTCACTGGCTGGTaGCTGCTGCAGCTGCTCAAACTGCATCTCCAGGTGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: RAPPALRRQAVLTGW*LLQLLKLHLQVLLD
Trigger: ATCCAGAAGCACCTGGAGATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGTCTGCGGAGGGCCGGAGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp CCGGCCTTCACACAGCAAGCTGGAAGAACTCTGAGACAGGGCCTGTaGACGGGGACTCTGTGGTTCCCGGGCACCTGGTTCAGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PAFTQQAGRTLRQGL*TGTLWFPGTWFRVA
Trigger: AGCCACCCTGAACCAGGTGCCCGGGAACCACAGAGTCCCCGTCCACAGGCCCTGTCTCAGAGTTCTTCCAGCTTGCTGTGTGAAGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS-3UTR CAA 90 bp CTGTCTACCCAGATGGGCCTTCCACCAGCCATGGGAGCTTCACTCCCCAGGGTGGTGCTGCTGGCACTCTaGCGAAGCTCTGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSTQMGLPPAMGASLPRVVLLAL*RSSGFC
Trigger: GCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCAC...CACCCTGGGGAGTGAAGCTCCCATGGCTGGTGGAAGGCCCATCTGGGTAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 90 bp TTGGCCAGCAACACTGCCAGGCTGCAACTGAGCCCTGTGGACAGGTaGGCTGCCAAGGGCAGAACAGCTCAGACTGGGCTTCTGAACGCC +
Preference number: 5 (lower is better)
Translates to: LASNTARLQLSPVDR*AAKGRTAQTGLLNA
Trigger: GGCGTTCAGAAGCCCAGTCTGAGCTGTTCTGCCCTTGGCAGCTCACCTGTCCACAGGGCTCAGTTGCAGCCTGGCAGTGTTGCTGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp CAGCAACACTGCCAGGCTGCAACTGAGCCCTGTGGACAGGTGAGCTaGCAAGGGCAGAACAGCTCAGACTGGGCTTCTGAACGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: QQHCQAATEPCGQVS*QGQNSSDWASERRH
Trigger: ATGGCGGCGTTCAGAAGCCCAGTCTGAGCTGTTCTGCCCTTGGCAGCTCACCTGTCCACAGGGCTCAGTTGCAGCCTGGCAGTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp CTGCTGGGCCCGCCATACAGTGCTGCTGGCACTCTTGCGAAGCTCTaGCTTCTGCTCCCGGCCTTCACACAGCAAGCTGGAAGAACTCTG +
Preference number: 5 (lower is better)
Translates to: LLGPPYSAAGTLAKL*LLLPAFTQQAGRTL
Trigger: CAGAGTTCTTCCAGCTTGCTGTGTGAAGGCCGGGAGCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 90 bp GAGCCCTGTGGACAGGTGAGCTGCCAAGGGCAGAACAGCTCAGACTaGGCTTCTGAACGCCGCCATGACCCCGGGTCTGGGTACTATGTA +
Preference number: 5 (lower is better)
Translates to: EPCGQVSCQGQNSSD*ASERRHDPGSGYYV
Trigger: TACATAGTACCCAGACCCGGGGTCATGGCGGCGTTCAGAAGCCCAGTCTGAGCTGTTCTGCCCTTGGCAGCTCACCTGTCCACAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 90 bp CCCGGCATCCTGAGCCGATGCCACACCCAGAGCCAAATCGGTGGCTaGGGTCATGGTCCACACATCTTTGGTCCTGGAGCCAGACTCTGT +
Preference number: 5 (lower is better)
Translates to: PGILSRCHTQSQIGG*GHGPHIFGPGARLC
Trigger: ACAGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGTGGCATCGGCTCAGGATGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 90 bp CGAGCACCTCAGGGTCCACAGAGGCTCCATACACCTCCCATGTCATaGCCTCGGCATCCCATCGTACATCCCTCACAGGTGACGATGCCT +
Preference number: 5 (lower is better)
Translates to: RAPQGPQRLHTPPMS*PRHPIVHPSQVTMP
Trigger: AGGCATCGTCACCTGTGAGGGATGTACGATGGGATGCCGAGGGCATGACATGGGAGGTGTATGGAGCCTCTGTGGACCCTGAGGTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp CCTGAGCCGATGCCACACCCAGAGCCAAATCGGTGGCTGAGGTCATaGTCCACACATCTTTGGTCCTGGAGCCAGACTCTGTGGCTAGCC +
Preference number: 5 (lower is better)
Translates to: PEPMPHPEPNRWLRS*STHLWSWSQTLWLA
Trigger: GGCTAGCCACAGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGTGGCATCGGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp GAACCCCGGCATCCTGAGCCGATGCCACACCCAGAGCCAAATCGGTaGCTGAGGTCATGGTCCACACATCTTTGGTCCTGGAGCCAGACT +
Preference number: 5 (lower is better)
Translates to: EPRHPEPMPHPEPNR*LRSWSTHLWSWSQT
Trigger: AGTCTGGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGTGGCATCGGCTCAGGATGCCGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp TCTTGCGAAGCTCTGGCTTCTGCTCCCGGCCTTCACACAGCAAGCTaGAAGAACTCTGAGACAGGGCCTGTGGACGGGGACTCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SCEALASAPGLHTAS*KNSETGPVDGDSVV
Trigger: AACCACAGAGTCCCCGTCCACAGGCCCTGTCTCAGAGTTCTTCCAGCTTGCTGTGTGAAGGCCGGGAGCAGAAGCCAGAGCTTCGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS TCA 90 bp TACAGTGGAATTTCATCCCACACTGGGCCTGCAACCCAGACTCACTaGCTGACGCCACCAGCTTGGGAAAGGCCAGGATGCCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: YSGISSHTGPATQTH*LTPPAWERPGCLWQ
Trigger: CTGCCAGAGGCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAGTCAGTGAGTCTGGGTTGCAGGCCCAGTGTGGGATGAAATTCCACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 90 bp TGGCAGGAAGTGGTAGGTGGCTGTCCAGTCGCTTTGGGCTCACCCTaGGGACCTCGGAGGAGACCAGTTGCATCTTCTAGTTCTACGGTT +
Preference number: 5 (lower is better)
Translates to: WQEVVGGCPVALGSP*GPRRRPVASSSSTV
Trigger: AACCGTAGAACTAGAAGATGCAACTGGTCTCCTCCGAGGTCCCCAGGGTGAGCCCAAAGCGACTGGACAGCCACCTACCACTTCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CAA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCACCTGTGATGCAGTGCTaGCAGTCTGCGCGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PEALPLHSLLELQSYRNSPVMQC*QSARAL
Trigger: CAGAGCACGCGCAGACTGCAAGCACTGCATCACAGG...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CAA 90 bp CCGGAAGCGCTCCCCTTACACAGCCTATTAGAGCTTCAATCCTACAGGAACTCAACTGACGCCACCAGCTaGGGAAAGGCCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: PEALPLHSLLELQSYRNSTDATS*GKARMP
Trigger: AGGCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAGT...TGAGTTCCTGTAGGATTGAAGCTCTAATAGGCTGTGTAAGGGGAGCGCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS-3UTR CAA 90 bp AGCCCTTGGGTAATAAAACCAGACGGAAAGACTCTGGGTCCCTCTCCCCACCCAATGGTCCACACATCTTaGGTCCTGGAGCCAGACTCT +
Preference number: 5 (lower is better)
Translates to: SPWVIKPDGKTLGPSPHPMVHTS*VLEPDS
Trigger: AGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCAT...TGGGTGGGGAGAGGGACCCAGAGTCTTTCCGTCTGGTTTTATTACCCAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 90 bp AGGAGACCAGTTGCATCTTCTAGTTCTACGGTTGGCACCCACACCTaGCTCTCCCCCAACGTGCAGGCTGATTTAGAAGTCCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: RRPVASSSSTVGTHT*LSPNVQADLEVPSS
Trigger: AGAGGATGGGACTTCTAAATCAGCCTGCACGTTGGGGGAGAGTCAGGTGTGGGTGCCAACCGTAGAACTAGAAGATGCAACTGGTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 72 bp CGCTCCAGAGCAGCCACAGCAGCTGGGTCTCCGCAGTaGCTGCATGACCGCCCGCAGAGGGCCCCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: RSRAATAAGSPQ*LHDRPQRAPPA
Trigger: GGCCGGAGGGGCCCTCTGCGGGCGGTCATGCAGTCACTGCGGAGACCCAGCTGCTGTGGCTGCTCTGGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 72 bp CCAGAGCAGCCACAGCAGCTGGGTCTCCGCAGTGACTaGATGACCGCCCGCAGAGGGCCCCTCCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PEQPQQLGLRSD*MTARRGPLRPS
Trigger: GGAGGGCCGGAGGGGCCCTCTGCGGGCGGTCATGCAGTCACTGCGGAGACCCAGCTGCTGTGGCTGCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 72 bp GCTGGTAGCCACAGCCTTGCAGGCTGCCGCGGGAGCTaGCTGAACCCCGGCATCCTGAGCCGATGCCACACC +
Preference number: 6 (lower is better)
Translates to: AGSHSLAGCRGS*LNPGILSRCHT
Trigger: GGTGTGGCATCGGCTCAGGATGCCGGGGTTCAGGCAGCTCCCGCGGCAGCCTGCAAGGCTGTGGCTACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp CGGCCTCACCCTGCTGGGCCCGCCATACAGTGCTGCTaGCACTCTTGCGAAGCTCTGGCTTCTGCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: RPHPAGPAIQCC*HSCEALASAPG
Trigger: GCCGGGAGCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 72 bp GCGTGCTCTGGGATCTCAGTCTGGCACGCCTCCTCCTaGAGGATCCGGGGACTAGAACCGGCCTCACCCTGC +
Preference number: 6 (lower is better)
Translates to: ACSGISVWHASS*RIRGLEPASPC
Trigger: GCAGGGTGAGGCCGGTTCTAGTCCCCGGATCCTGCAGGAGGAGGCGTGCCAGACTGAGATCCCAGAGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 72 bp GGCCCCTCCGGCCCTCCGCAGACAGGCTGTCCTCACTaGCTGGTGCCTGCTGCAGCTGCTCAAACTGCATCT +
Preference number: 6 (lower is better)
Translates to: GPSGPPQTGCPH*LVPAAAAQTAS
Trigger: AGATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGTCTGCGGAGGGCCGGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CAA 90 bp CCGGCCTCACCCTGCTGGGCCCGCCATACAGTGCTGCTGGCACTCTaGCGAAGCTCTGGCTTCTGCTCCCGGCCTTCACACAGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: PASPCWARHTVLLAL*RSSGFCSRPSHSKL
Trigger: CAGCTTGCTGTGTGAAGGCCGGGAGCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 72 bp AACCGGCCTCACCCTGCTGGGCCCGCCATACAGTGCTaGTGGCACTCTTGCGAAGCTCTGGCTTCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: NRPHPAGPAIQC*WHSCEALASAP
Trigger: GGGAGCAGAAGCCAGAGCTTCGCAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 72 bp TCCTGCAGGATCCGGGGACTAGAACCGGCCTCACCCTaGTGGGCCCGCCATACAGTGCTGCTGGCACTCTTG +
Preference number: 6 (lower is better)
Translates to: SCRIRGLEPASP*WARHTVLLALL
Trigger: CAAGAGTGCCAGCAGCACTGTATGGCGGGCCCAGCAGGGTGAGGCCGGTTCTAGTCCCCGGATCCTGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS GCA 72 bp CCTCCAGCCCCAGCCTGTGATGCAGTGCTTGCAGTCTaGGCGTGCTCTGGGATCTCAGTCTGGCACGCCTCC +
Preference number: 6 (lower is better)
Translates to: PPAPACDAVLAV*ACSGISVWHAS
Trigger: GGAGGCGTGCCAGACTGAGATCCCAGAGCACGCGCAGACTGCAAGCACTGCATCACAGGCTGGGGCTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 72 bp CCAAGTCTGAGTGGCTCCTCTGCACAGCTGCCACGCTaGGGGCCCGTAGGCGACACAGATCACCGATGCCCA +
Preference number: 6 (lower is better)
Translates to: PSLSGSSAQLPR*GPVGDTDHRCP
Trigger: TGGGCATCGGTGATCTGTGTCGCCTACGGGCCCCCAGCGTGGCAGCTGTGCAGAGGAGCCACTCAGACTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 72 bp GGACAGGTGAGCTGCCAAGGGCAGAACAGCTCAGACTaGGCTTCTGAACGCCGCCATGACCCCGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GQVSCQGQNSSD*ASERRHDPGSG
Trigger: CCCAGACCCGGGGTCATGGCGGCGTTCAGAAGCCCAGTCTGAGCTGTTCTGCCCTTGGCAGCTCACCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp CCCAGGGTGCAAAGCAGAGCTGCCGGAGGCAGAGCGTaGCAGGAAGTGGTAGGTGGCTGTCCAGTCGCTTTG +
Preference number: 6 (lower is better)
Translates to: PRVQSRAAGGRA*QEVVGGCPVAL
Trigger: CAAAGCGACTGGACAGCCACCTACCACTTCCTGCCACGCTCTGCCTCCGGCAGCTCTGCTTTGCACCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp CTGACGCCACCAGCTTGGGAAAGGCCAGGATGCCTCTaGCAGGCAGGGCATGGCAGCAGCTACCAGCTACAG +
Preference number: 6 (lower is better)
Translates to: LTPPAWERPGCL*QAGHGSSYQLQ
Trigger: CTGTAGCTGGTAGCTGCTGCCATGCCCTGCCTGCCAGAGGCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CAA 72 bp GCGTGGCAGGAAGTGGTAGGTGGCTGTCCAGTCGCTTaGGGCTCACCCTGGGGACCTCGGAGGAGACCAGTT +
Preference number: 6 (lower is better)
Translates to: AWQEVVGGCPVA*GSPWGPRRRPV
Trigger: AACTGGTCTCCTCCGAGGTCCCCAGGGTGAGCCCAAAGCGACTGGACAGCCACCTACCACTTCCTGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 72 bp GTCTGGGTACTATGTACCAAGTCTGAGTGGCTCCTCTaGACAGCTGCCACGCTGGGGGCCCGTAGGCGACAC +
Preference number: 6 (lower is better)
Translates to: VWVLCTKSEWLL*TAATLGARRRH
Trigger: GTGTCGCCTACGGGCCCCCAGCGTGGCAGCTGTGCAGAGGAGCCACTCAGACTTGGTACATAGTACCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CCA 72 bp GCTCTGGCTTCTGCTCCCGGCCTTCACACAGCAAGCTaGAAGAACTCTGAGACAGGGCCTGTGGACGGGGAC +
Preference number: 6 (lower is better)
Translates to: ALASAPGLHTAS*KNSETGPVDGD
Trigger: GTCCCCGTCCACAGGCCCTGTCTCAGAGTTCTTCCAGCTTGCTGTGTGAAGGCCGGGAGCAGAAGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS TCA 72 bp CATCCCACACTGGGCCTGCAACCCAGACTCACTGACTaGCGCCACCAGCTTGGGAAAGGCCAGGATGCCTCT +
Preference number: 6 (lower is better)
Translates to: HPTLGLQPRLTD*RHQLGKGQDAS
Trigger: AGAGGCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAGTCAGTGAGTCTGGGTTGCAGGCCCAGTGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp AGAACTCTGAGACAGGGCCTGTGGACGGGGACTCTGTaGTTCCCGGGCACCTGGTTCAGGGTGGCTAGAACT +
Preference number: 6 (lower is better)
Translates to: RTLRQGLWTGTL*FPGTWFRVART
Trigger: AGTTCTAGCCACCCTGAACCAGGTGCCCGGGAACCACAGAGTCCCCGTCCACAGGCCCTGTCTCAGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226511.2
ENSMUST00000226613.2
CDS CAA 90 bp GTCCAGTCGCTTTGGGCTCACCCTGGGGACCTCGGAGGAGACCAGTaGCATCTTCTAGTTCTACGGTTGGCACCCACACCTGACTCTCCC +
Preference number: 6 (lower is better)
Translates to: VQSLWAHPGDLGGDQ*HLLVLRLAPTPDSP
Trigger: GGGAGAGTCAGGTGTGGGTGCCAACCGTAGAACTAGAAGATGCAACTGGTCTCCTCCGAGGTCCCCAGGGTGAGCCCAAAGCGACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 72 bp AACACTGCCAGGCTGCAACTGAGCCCTGTGGACAGGTaGGCTGCCAAGGGCAGAACAGCTCAGACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: NTARLQLSPVDR*AAKGRTAQTGL
Trigger: AAGCCCAGTCTGAGCTGTTCTGCCCTTGGCAGCTCACCTGTCCACAGGGCTCAGTTGCAGCCTGGCAGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 72 bp CTGAGCCGATGCCACACCCAGAGCCAAATCGGTGGCTaGGGTCATGGTCCACACATCTTTGGTCCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: LSRCHTQSQIGG*GHGPHIFGPGA
Trigger: GGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGTGGCATCGGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 72 bp GATTTAGAAGTCCCATCCTCTGGAGCTGAGTCACTCTaGAGGGGTGCAGGGGTCTGGCCTCCTTGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: DLEVPSSGAESL*RGAGVWPPWPA
Trigger: TGCTGGCCAAGGAGGCCAGACCCCTGCACCCCTGCAGAGTGACTCAGCTCCAGAGGATGGGACTTCTAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS GCA 72 bp GACAGGCTGTCCTCACTGGCTGGTGCCTGCTGCAGCTaGTCAAACTGCATCTCCAGGTGCTTCTGGATGGCA +
Preference number: 6 (lower is better)
Translates to: DRLSSLAGACCS*SNCISRCFWMA
Trigger: TGCCATCCAGAAGCACCTGGAGATGCAGTTTGAGCAGCTGCAGCAGGCACCAGCCAGTGAGGACAGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp GTGGTAGGTGGCTGTCCAGTCGCTTTGGGCTCACCCTaGGGACCTCGGAGGAGACCAGTTGCATCTTCTAGT +
Preference number: 6 (lower is better)
Translates to: VVGGCPVALGSP*GPRRRPVASSS
Trigger: ACTAGAAGATGCAACTGGTCTCCTCCGAGGTCCCCAGGGTGAGCCCAAAGCGACTGGACAGCCACCTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CAA 90 bp ACACCCAGAGCCAAATCGGTGGCTGAGGTCATGGTCCACACATCTTaGGTCCTGGAGCCAGACTCTGTGGCTAGCCCTGTAGGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: TPRAKSVAEVMVHTS*VLEPDSVASPVGPQ
Trigger: TTGGGGGCCTACAGGGCTAGCCACAGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 72 bp ATTTCATCCCACACTGGGCCTGCAACCCAGACTCACTaGCTGACGCCACCAGCTTGGGAAAGGCCAGGATGC +
Preference number: 6 (lower is better)
Translates to: ISSHTGPATQTH*LTPPAWERPGC
Trigger: GCATCCTGGCCTTTCCCAAGCTGGTGGCGTCAGTCAGTGAGTCTGGGTTGCAGGCCCAGTGTGGGATGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp CATCCTGAGCCGATGCCACACCCAGAGCCAAATCGGTaGCTGAGGTCATGGTCCACACATCTTTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: HPEPMPHPEPNR*LRSWSTHLWSW
Trigger: CCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGCTCTGGGTGTGGCATCGGCTCAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CAA 72 bp CTTTGGGCTCACCCTGGGGACCTCGGAGGAGACCAGTaGCATCTTCTAGTTCTACGGTTGGCACCCACACCT +
Preference number: 6 (lower is better)
Translates to: LWAHPGDLGGDQ*HLLVLRLAPTP
Trigger: AGGTGTGGGTGCCAACCGTAGAACTAGAAGATGCAACTGGTCTCCTCCGAGGTCCCCAGGGTGAGCCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CCA 72 bp CCCCCAGACAACTTACAGTGGAATTTCATCCCACACTaGGCCTGCAACCCAGACTCACTGACTGACGCCACC +
Preference number: 6 (lower is better)
Translates to: PPDNLQWNFIPH*ACNPDSLTDAT
Trigger: GGTGGCGTCAGTCAGTGAGTCTGGGTTGCAGGCCCAGTGTGGGATGAAATTCCACTGTAAGTTGTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS CAA 72 bp GCCAAATCGGTGGCTGAGGTCATGGTCCACACATCTTaGGTCCTGGAGCCAGACTCTGTGGCTAGCCCTGTA +
Preference number: 6 (lower is better)
Translates to: AKSVAEVMVHTS*VLEPDSVASPV
Trigger: TACAGGGCTAGCCACAGAGTCTGGCTCCAGGACCAAAGATGTGTGGACCATGACCTCAGCCACCGATTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2
CDS TCA 72 bp GTTGCATCTTCTAGTTCTACGGTTGGCACCCACACCTaGCTCTCCCCCAACGTGCAGGCTGATTTAGAAGTC +
Preference number: 6 (lower is better)
Translates to: VASSSSTVGTHT*LSPNVQADLEV
Trigger: GACTTCTAAATCAGCCTGCACGTTGGGGGAGAGTCAGGTGTGGGTGCCAACCGTAGAACTAGAAGATGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226613.2