RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPRC5C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051043

Ensembl transcript IDs: ENSMUST00000021071.14, ENSMUST00000053361.12, ENSMUST00000122967.3, ENSMUST00000133245.2, ENSMUST00000136785.2, ENSMUST00000142262.2, ENSMUST00000152314.2, ENSMUST00000177952.8

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCTGGTGGCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCACCTGGCTGTTGGCGGTGGCCCGTGG +
Preference number: 1 (lower is better)
Translates to: HLVALDHVHVFGPQG*VGTAHHLAVGGGPW
Trigger: CCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 90 bp GGTGGCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGCTGTTGGCGGTGGCCCGTGGGAGGA +
Preference number: 1 (lower is better)
Translates to: GGSGPCTCLRPAGLS*HCPSPGCWRWPVGG
Trigger: TCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 90 bp CAGCCACTGGTGTCAGCAGCTTGCAGGCCTGAAAATGGCCCTCTCTaGCCTGGGTGGCCATCGGGTGCCTCCGGTGCATGTCCTAAGGCC +
Preference number: 1 (lower is better)
Translates to: QPLVSAACRPENGPL*PGWPSGASGACPKA
Trigger: GGCCTTAGGACATGCACCGGAGGCACCCGATGGCCACCCAGGTCAGAGAGGGCCATTTTCAGGCCTGCAAGCTGCTGACACCAGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 90 bp TGGCACTGCCCATCACCTGGCTGTTGGCGGTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAGACGGGCCTTTGTGCATCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: WHCPSPGCWRWPVGG*RRMHLQTGLCASGP
Trigger: TGGCCCTGATGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 90 bp TACATGTCTTCGGCCCGCAGGGTTGAGTTGGCACTGCCCATCACCTaGCTGTTGGCGGTGGCCCGTGGGAGGATGACGTCGTATGCACCT +
Preference number: 1 (lower is better)
Translates to: YMSSARRVELALPIT*LLAVARGRMTSYAP
Trigger: AGGTGCATACGACGTCATCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 90 bp TACCATGACACCATCTCAGCCACTGGTGTCAGCAGCTTGCAGGCCTaGAAATGGCCCTCTCTGACCTGGGTGGCCATCGGGTGCCTCCGG +
Preference number: 1 (lower is better)
Translates to: YHDTISATGVSSLQA*KWPSLTWVAIGCLR
Trigger: CCGGAGGCACCCGATGGCCACCCAGGTCAGAGAGGGCCATTTTCAGGCCTGCAAGCTGCTGACACCAGTGGCTGAGATGGTGTCATGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 90 bp CTGGTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTaGTCAGATGGATGCAGAGCATTGAGGGATCCAGATGAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: LVPPSSKDRWESCWP*SDGCRALRDPDEVW
Trigger: CCACACCTCATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 90 bp ATAAGCTACCCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATaGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCCC +
Preference number: 1 (lower is better)
Translates to: ISYPEPVRREGSHRA*APWWSLTQTRSQGP
Trigger: GGGCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGGGTAGCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 90 bp TGGCCTCTGGTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTaGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATGAG +
Preference number: 1 (lower is better)
Translates to: WPLVPPSSKDRWESC*PCSDGCRALRDPDE
Trigger: CTCATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 90 bp CCAGGAGCCTCCAATCACTCCTCAGCTTCAGGTGCAGGCAGGCCTTaGGCTATAAACACAGCCACACCCACCACAGGCTACACACCTAGG +
Preference number: 1 (lower is better)
Translates to: PGASNHSSASGAGRP*AINTATPTTGYTPR
Trigger: CCTAGGTGTGTAGCCTGTGGTGGGTGTGGCTGTGTTTATAGCCCAAGGCCTGCCTGCACCTGAAGCTGAGGAGTGATTGGAGGCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp ATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTaGTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCT +
Preference number: 1 (lower is better)
Translates to: IPRSRLSPLFQIGGL*SLPVPRTGGKAAGP
Trigger: AGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 90 bp CAGGCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTaGCCTCTGGTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGC +
Preference number: 1 (lower is better)
Translates to: QAYPKVPTQSTVSNW*PLVPPSSKDRWESC
Trigger: GCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR TCA 90 bp AAGAGCTTCCTCAGATGGGACCAGTGTAACTGCCATCTTCAATGGTaGTGGGCAGTGGGGAGGACAGAACAGGCCGACTGGTCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: KSFLRWDQCNCHLQW*WAVGRTEQADWSCP
Trigger: AGGGCAGGACCAGTCGGCCTGTTCTGTCCTCCCCACTGCCCATCACCATTGAAGATGGCAGTTACACTGGTCCCATCTGAGGAAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 90 bp AGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATaGAGAGCATTGAGGGATCCAGATGAGGTGTGGTCCAGGGAAGAG +
Preference number: 1 (lower is better)
Translates to: SSKDRWESCWPCSDG*RALRDPDEVWSREE
Trigger: CTCTTCCCTGGACCACACCTCATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 90 bp CATGCTGACGGGACACCAACATGGCCAAGAAGGTCCGTCACACACTaGACATTCACAGCGAGACAGCAACCTGGAGAACCACATGGGAAC +
Preference number: 1 (lower is better)
Translates to: HADGTPTWPRRSVTH*TFTARQQPGEPHGN
Trigger: GTTCCCATGTGGTTCTCCAGGTTGCTGTCTCGCTGTGAATGTCCAGTGTGTGACGGACCTTCTTGGCCATGTTGGTGTCCCGTCAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 90 bp CTTACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTaGGCTCAATGGAGGCTTATAGGTGTCACCGGAGAGCGTAGGCAT +
Preference number: 1 (lower is better)
Translates to: LTPHRGAGSSLRHPL*AQWRLIGVTGERRH
Trigger: ATGCCTACGCTCTCCGGTGACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR TCA 90 bp CAGTCGGACACAGGAAAGGTTCAACTCACCCTGAGAATGCAGCCCTaGATTCCACCCACATGTCCTAAGGGAACTCCCAGACCCCACGTA +
Preference number: 1 (lower is better)
Translates to: QSDTGKVQLTLRMQP*IPPTCPKGTPRPHV
Trigger: TACGTGGGGTCTGGGAGTTCCCTTAGGACATGTGGGTGGAATTCAGGGCTGCATTCTCAGGGTGAGTTGAACCTTTCCTGTGTCCGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp CACGTAGGGATTTCTAAAGACCTGAGAGATCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCTCTGGACCATGTACATGTCTTCGGC +
Preference number: 1 (lower is better)
Translates to: HVGISKDLRDLAVFW*RGHLVALDHVHVFG
Trigger: GCCGAAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCCCTACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 90 bp CAGCGAGACAGCAACCTGGAGAACCACATGGGAACACAGACACTGTaGCCTGAGGGATGTGTTAAGGCAGGAGATGGGAGTCAACAGTTC +
Preference number: 1 (lower is better)
Translates to: QRDSNLENHMGTQTL*PEGCVKAGDGSQQF
Trigger: GAACTGTTGACTCCCATCTCCTGCCTTAACACATCCCTCAGGTCACAGTGTCTGTGTTCCCATGTGGTTCTCCAGGTTGCTGTCTCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 90 bp CCCCACGTATGTCCTGGTAGCCCAAGCAGGTGCTTCCAGAACCTGTaGGATCCAGGTAATTCAGCAATATCCACATCTGCACCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: PHVCPGSPSRCFQNL*DPGNSAISTSAPVP
Trigger: TGGGACAGGTGCAGATGTGGATATTGCTGAATTACCTGGATCTCACAGGTTCTGGAAGCACCTGCTTGGGCTACCAGGACATACGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 90 bp TGTGTTAAGGCAGGAGATGGGAGTCAACAGTTCACTCCCTGTAGCTaGAGTTTCTTGGATACCAGGAGGTTGGGATGGGCAAGGGACAGG +
Preference number: 1 (lower is better)
Translates to: CVKAGDGSQQFTPCS*SFLDTRRLGWARDR
Trigger: CCTGTCCCTTGCCCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTGACTCCCATCTCCTGCCTTAACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp AAGCAGAACGCTATTTGGATAGAGTTAGATCACCAGAGGTGGCCCTaGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTG +
Preference number: 1 (lower is better)
Translates to: KQNAIWIELDHQRWP*HETGQAPGLHKYWV
Trigger: CACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTCTATCCAAATAGCGTTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 90 bp AACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTaGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATA +
Preference number: 1 (lower is better)
Translates to: NSSLPVAAVSWIPGG*DGQGTGGPMSTSHI
Trigger: TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 90 bp CACACACTGGACATTCACAGCGAGACAGCAACCTGGAGAACCACATaGGAACACAGACACTGTGACCTGAGGGATGTGTTAAGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: HTLDIHSETATWRTT*EHRHCDLRDVLRQE
Trigger: CTCCTGCCTTAACACATCCCTCAGGTCACAGTGTCTGTGTTCCCATGTGGTTCTCCAGGTTGCTGTCTCGCTGTGAATGTCCAGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp AAGAAGGTCCGTCACACACTGGACATTCACAGCGAGACAGCAACCTaGAGAACCACATGGGAACACAGACACTGTGACCTGAGGGATGTG +
Preference number: 1 (lower is better)
Translates to: KKVRHTLDIHSETAT*RTTWEHRHCDLRDV
Trigger: CACATCCCTCAGGTCACAGTGTCTGTGTTCCCATGTGGTTCTCCAGGTTGCTGTCTCGCTGTGAATGTCCAGTGTGTGACGGACCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp CCACACGTAGGGATTTCTAAAGACCTGAGAGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTGGCTCTGGACCATGTACATGTCTTC +
Preference number: 1 (lower is better)
Translates to: PHVGISKDLRDLAVF*WRGHLVALDHVHVF
Trigger: GAAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCCCTACGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 90 bp CAAAGAATGATGTTCTGGAGATCTCGAGTCCAGGGTCTGGTACCATaGCACCATCTCAGCCACTGGTGTCAGCAGCTTGCAGGCCTGAAA +
Preference number: 1 (lower is better)
Translates to: QRMMFWRSRVQGLVP*HHLSHWCQQLAGLK
Trigger: TTTCAGGCCTGCAAGCTGCTGACACCAGTGGCTGAGATGGTGTCATGGTACCAGACCCTGGACTCGAGATCTCCAGAACATCATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 90 bp ACACGACCCACTGAAGGTATAGTAGACTCCATCCAGATTCAAAGGTaGTGGGACCTGAGACCCTCAGGTCATGAGAAACAGCCTGCCCAA +
Preference number: 1 (lower is better)
Translates to: TRPTEGIVDSIQIQR*WDLRPSGHEKQPAQ
Trigger: TTGGGCAGGCTGTTTCTCATGACCTGAGGGTCTCAGGTCCCAGCACCTTTGAATCTGGATGGAGTCTACTATACCTTCAGTGGGTCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp CGACCCACTGAAGGTATAGTAGACTCCATCCAGATTCAAAGGTGCTaGGACCTGAGACCCTCAGGTCATGAGAAACAGCCTGCCCAAACT +
Preference number: 1 (lower is better)
Translates to: RPTEGIVDSIQIQRC*DLRPSGHEKQPAQT
Trigger: AGTTTGGGCAGGCTGTTTCTCATGACCTGAGGGTCTCAGGTCCCAGCACCTTTGAATCTGGATGGAGTCTACTATACCTTCAGTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp TGGGAATCCACTCATCTTTACCTCTACCTTGGCACTAAGCAGGACTaGGCTGAGGGCCAAGTTAGCACACTTGGGGGAAAGGGTATAGAA +
Preference number: 1 (lower is better)
Translates to: WESTHLYLYLGTKQD*AEGQVSTLGGKGIE
Trigger: TTCTATACCCTTTCCCCCAAGTGTGCTAACTTGGCCCTCAGCCCAGTCCTGCTTAGTGCCAAGGTAGAGGTAAAGATGAGTGGATTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 90 bp AACCTTTCATCCAATGATAAAAGGCACAGGTTGCTGGGGATGGCATaGGAACTAGGCATGGAGTGCCTGGCTATCCTGGGAATCCACTCA +
Preference number: 1 (lower is better)
Translates to: NLSSNDKRHRLLGMA*ELGMECLAILGIHS
Trigger: TGAGTGGATTCCCAGGATAGCCAGGCACTCCATGCCTAGTTCTCATGCCATCCCCAGCAACCTGTGCCTTTTATCATTGGATGAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 90 bp CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCTTCTaGCTCCCAAGTGAAAAATGTACTTCTCCACTGGAACTGGAACTA +
Preference number: 1 (lower is better)
Translates to: LCRPGWPRTQKSACF*LPSEKCTSPLELEL
Trigger: TAGTTCCAGTTCCAGTGGAGAAGTACATTTTTCACTTGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 90 bp GCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTATaGTCCTACTCTGTGGGAACCTTTCATCCAATGATAAAAGGCACA +
Preference number: 1 (lower is better)
Translates to: ASSVSRGQEEYHLEV*SYSVGTFHPMIKGT
Trigger: TGTGCCTTTTATCATTGGATGAAAGGTTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CAA 90 bp TGGTGGCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTTGAGTaGGCACTGCCCATCACCTGGCTGTTGGCGGTGGCCCGTGGGAGG +
Preference number: 2 (lower is better)
Translates to: WWLWTMYMSSARRVE*ALPITWLLAVARGR
Trigger: CCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CAA 90 bp CCACCTGGTGGCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCACCTGGCTGTTGGCGGTGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: PPGGSGPCTCLRPAG*SWHCPSPGCWRWPV
Trigger: CACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACCAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR-3UTR CCA 90 bp CTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGGGGCGCACTGCCCATCACCTaGCTGTTGGCGGTGGCCCGT +
Preference number: 2 (lower is better)
Translates to: LGGRGPHGHPTKHQQIRGALPIT*LLAVAR
Trigger: ACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGC...GCCCCTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR-3UTR CCA 90 bp TGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGACCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGC +
Preference number: 2 (lower is better)
Translates to: WPWHETGQAPGLHKYWVGPAGLS*HCPSPG
Trigger: GCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGG...TCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR-3UTR CCA 90 bp CCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGAACAGGGCAGGCGCCTaGACTCCACAAATACTGGGT +
Preference number: 2 (lower is better)
Translates to: PWHETGQAPGLHKYWVGGNRAGA*TPQILG
Trigger: ACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTT...CCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR-3UTR GCA 90 bp CCAGGAGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATAGAAAGCTGCTGGCCCTaGTCAGATGGATGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: PGGWDGQGTGGPMSTSHIESCWP*SDGCRA
Trigger: TGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTC...TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR CCA 90 bp ATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATTCCACAAATACTGGGTaGGAGGGGCCCTCATGGACA +
Preference number: 2 (lower is better)
Translates to: ITRGGPGMKQGRRLDSTNSTNTG*EGPSWT
Trigger: TGTCCATGAGGGCCCCTCCCACCCAGTATTTGTGGA...ATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR-3UTR CCA 90 bp CCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCCTGGCCCTGCTCAGATaGATGCAGAGCATTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PKVPTQSTVSNWWPLVPPLALLR*MQSIEG
Trigger: TCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAG...GGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR GCA 90 bp TCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: SQRSRIQPKASSLSSMEAGLSWH*PSPGCW
Trigger: CCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCC...AGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR-3UTR CCA 90 bp GCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCAGTTCCAAGGACAGGTaGGAAAGCTGCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: AYPKVPTQSTVSNWWPLVSSKDR*ESCWPC
Trigger: GCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACT...GACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR CCA 90 bp CTGGCCACAGCTGCTGCCTTAGTCCCACACGTAGGGATTTCTAAAGACCTGAGACTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: LATAAALVPHVGISKDLRLAVFW*RGHLVA
Trigger: AGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAG...TCTCAGGTCTTTAGAAATCCCTACGTGTGGGACTAAGGCAGCAGCTGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CAA 90 bp GGTGCCTCCGGTGCATGTCCTAAGGCCAAGGACTCTCCTCTAATGTaGAAAGCAGCAGATCATGTCCATGTGTCCCAAGGACGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GASGACPKAKDSPLM*KAADHVHVSQGRLL
Trigger: CAGCAGCCGTCCTTGGGACACATGGACATGATCTGCTGCTTTCAACATTAGAGGAGAGTCCTTGGCCTTAGGACATGCACCGGAGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp AGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAAGGTGGGAAAGCTGCTaGCCCTGCTCAGATGGATGC +
Preference number: 2 (lower is better)
Translates to: RLGWARDRWPYEHQSHISRWESC*PCSDGC
Trigger: GCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCT...TGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR CCA 90 bp CCCTATGAGCACCAGTCACATATTTCAGGCCTATCCCAAGGTCCCGACTCAGTCAGTTCCAAGGACAGGTaGGAAAGCTGCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: PYEHQSHISGLSQGPDSVSSKDR*ESCWPC
Trigger: GCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACT...GACTGAGTCGGGACCTTGGGATAGGCCTGAAATATGTGACTGGTGCTCATAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CAA 90 bp GGAGTGCCTGGCTATCCTGGGAATCCACTCATCTTTACCTCTACCTaGGCACTAAGCAGGACTGGGCTGAGGGCCAAGTTAGCACACTTG +
Preference number: 2 (lower is better)
Translates to: GVPGYPGNPLIFTST*ALSRTGLRAKLAHL
Trigger: CAAGTGTGCTAACTTGGCCCTCAGCCCAGTCCTGCTTAGTGCCAAGGTAGAGGTAAAGATGAGTGGATTCCCAGGATAGCCAGGCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR GCA 90 bp GGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGCCTATCCCAAGGTCCCCTGCTCAGATGGATaGAGAGCATTGAGGGATCCA +
Preference number: 2 (lower is better)
Translates to: GTGGPMSTSHIFQAYPKVPCSDG*RALRDP
Trigger: TGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGG...GACCTTGGGATAGGCCTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR CCA 90 bp GGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCACTGTTTCAAATTGGTaGCCTCTGGTCCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: GPDSVHCFKLVASGPSQFTVSNW*PLVPPS
Trigger: ACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGT...GAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR TCA 90 bp TCAGGCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTATTGAGGGATCCAGATaGGGTGTGGTCCAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SGLSQGPDSVHCFKLVASIEGSR*GVVQGR
Trigger: TCTTCCCTGGACCACACCTCATCTGGATCCCTCAAT...AGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR TCA 90 bp AGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAATTGAGGGATCCAGATaGGGTGTGGTCCAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: RLGWARDRWPYEHQSHISIEGSR*GVVQGR
Trigger: TCTTCCCTGGACCACACCTCATCTGGATCCCTCAAT...TGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR TCA 90 bp CTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCATGGATGCAGAGCATTaGGGGATCCAGATGAGGTGT +
Preference number: 2 (lower is better)
Translates to: LSQGPDSVHCFKLVASGPMDAEH*GIQMRC
Trigger: ACACCTCATCTGGATCCCTCAATGCTCTGCATCCAT...GGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CAA 90 bp AGCTTGGATCAAGCCTGGACCTACTTGATGTCTCCCACTCAAGGCTaGTGTATGATACAGAGCTGTTCATTTGGAGGCCCCCAACCCTCC +
Preference number: 2 (lower is better)
Translates to: SLDQAWTYLMSPTQG*CMIQSCSFGGPQPS
Trigger: GGAGGGTTGGGGGCCTCCAAATGAACAGCTCTGTATCATACACAAGCCTTGAGTGGGAGACATCAAGTAGGTCCAGGCTTGATCCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR GCA 90 bp CTTACTGCGGCAGATCTTGGGGCTCTAGATCAAGAACAGTGTGAGGTGCATGGACCCTGCTCAGATGGATaGAGAGCATTGAGGGATCCA +
Preference number: 2 (lower is better)
Translates to: LTAADLGALDQEQCEVHGPCSDG*RALRDP
Trigger: TGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGG...TCCATGCACCTCACACTGTTCTTGATCTAGAGCCCCAAGATCTGCCGCAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp GAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTAGGTCCGTCACACACTaGACATTCACAGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: EGPSILSQQRARGVSFGGRSVTH*TFTARQ
Trigger: CTGTCTCGCTGTGAATGTCCAGTGTGTGACGGACCT...ACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGAACAGAACAGGCCGACTaGTCCTGCCCTGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRTEQAD*SCPGEG
Trigger: CCCCTCACCAGGGCAGGACCAGTCGGCCTGTTCTGT...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR TCA 90 bp CCTTGTGGAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTATGGATGCAGAGCATTaGGGGATCCAGATGAGGTGT +
Preference number: 2 (lower is better)
Translates to: PCGRTKHPQSAEGKRSIIMDAEH*GIQMRC
Trigger: ACACCTCATCTGGATCCCTCAATGCTCTGCATCCAT...AATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTCCACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp CTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGAGTCCAGGGCTGGCCCTGCTCAGATaGATGCAGAGCATTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LVPKSRTKNDVLEISSPGLALLR*MQSIEG
Trigger: TCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAG...CCCTGGACTCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp AGTCAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGAACTGTTTCAAATTGGTaGCCTCTGGTCCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: SQQFTPCSCSFLDTRRLGTVSNW*PLVPPS
Trigger: ACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGT...TCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR TCA 90 bp TCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTATGGTCCTACTCTGTGGGAATGCTTCCAGAACCTGTaGGATCCAGGTAATTCAGCA +
Preference number: 2 (lower is better)
Translates to: SAEGKRSIIWRYGPTLWECFQNL*DPGNSA
Trigger: TGCTGAATTACCTGGATCTCACAGGTTCTGGAAGCA...TTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp TGTTCTGGAGATCTCGAGTCCAGGGTCTGGTACCATGACACCATCTCAGCCACTACAACTTCTGTTGTGTaGCTTGTCTCCAAAGACTCA +
Preference number: 2 (lower is better)
Translates to: CSGDLESRVWYHDTISATTTSVV*LVSKDS
Trigger: TGAGTCTTTGGAGACAAGCCACACAACAGAAGTTGT...AGTGGCTGAGATGGTGTCATGGTACCAGACCCTGGACTCGAGATCTCCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CAA 90 bp AAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTaGGAGGTATGGTCCTACTCTGTGGGAACCTTTCATCCAATGATA +
Preference number: 2 (lower is better)
Translates to: KDQASSVSRGQEEYH*EVWSYSVGTFHPMI
Trigger: TATCATTGGATGAAAGGTTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGACAGATTCAAAGGTGCTaGGACCTGAGACCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRQIQRC*DLRPSG
Trigger: ACCTGAGGGTCTCAGGTCCCAGCACCTTTGAATCTG...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR GCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGATTCACTCCCTGTAGCTaGAGTTTCTTGGATACCAGG +
Preference number: 2 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRFTPCS*SFLDTR
Trigger: CCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAA...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 72 bp TGTACATGTCTTCGGCCCGCAGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGGCGGTGGCCCGTGGGA +
Preference number: 3 (lower is better)
Translates to: CTCLRPAGLSWH*PSPGCWRWPVG
Trigger: TCCCACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 72 bp CCATCACCTGGCTGTTGGCGGTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAGACGGGCCTTTGTGCA +
Preference number: 3 (lower is better)
Translates to: PSPGCWRWPVGG*RRMHLQTGLCA
Trigger: TGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR GCA 72 bp TGGGCAGTGGGGAGGACAGAACAGGCCGACTGGTCCTaGCCTGGTGAGGGGACACGACCCACTGAAGGTATA +
Preference number: 3 (lower is better)
Translates to: WAVGRTEQADWS*PGEGTRPTEGI
Trigger: TATACCTTCAGTGGGTCGTGTCCCCTCACCAGGGCAGGACCAGTCGGCCTGTTCTGTCCTCCCCACTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 72 bp GCTGTTGGCGGTGGCCCGTGGGAGGATGACGTCGTATaGACCTTCAGACGGGCCTTTGTGCATCAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: AVGGGPWEDDVV*TFRRAFVHQGH
Trigger: ATGGCCCTGATGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCTCCCACGGGCCACCGCCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 72 bp AGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTaGTCCCTCACCCAAACCAGGTCCCAAGGGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RREGSHRAWAPW*SLTQTRSQGPS
Trigger: AGAGGGCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp GTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTaGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCCC +
Preference number: 3 (lower is better)
Translates to: VRREGSHRAWAP*WSLTQTRSQGP
Trigger: GGGCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR TCA 72 bp GCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCACCTGGCTGTTGGCGGT +
Preference number: 3 (lower is better)
Translates to: ALDHVHVFGPQG*VGTAHHLAVGG
Trigger: ACCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 72 bp TGGTGGCCTCTGGTCCCTCCCAGTTCCAAGGACAGGTaGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGA +
Preference number: 3 (lower is better)
Translates to: WWPLVPPSSKDR*ESCWPCSDGCR
Trigger: TCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAGAGGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 72 bp TTGCCGTCTTTTGGTGGCGTGGCCACCTGGTGGCTCTaGACCATGTACATGTCTTCGGCCCGCAGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: LPSFGGVATWWL*TMYMSSARRVE
Trigger: CTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 72 bp GAGATCTTGCCGTCTTTTGGTGGCGTGGCCACCTGGTaGCTCTGGACCATGTACATGTCTTCGGCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: EILPSFGGVATW*LWTMYMSSARR
Trigger: CCTGCGGGCCGAAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR GCA 72 bp AGGATGACGTCGTATGCACCTTCAGACGGGCCTTTGTaGATCAGGGCCATCTCGGTGGGCTGGTACACGCTG +
Preference number: 3 (lower is better)
Translates to: RMTSYAPSDGPL*IRAISVGWYTL
Trigger: CAGCGTGTACCAGCCCACCGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR CCA 72 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATaGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCC +
Preference number: 3 (lower is better)
Translates to: PEPVRREGSHRA*APWWSLTQTRS
Trigger: GGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp GCACCACTGTGGCCCACGGGCTCTTCAACTCTGATGTaGGTTCTCTGTGTGGCAGGGCTGGACAAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: APLWPTGSSTLM*VLCVAGLDKKS
Trigger: GCTCTTCTTGTCCAGCCCTGCCACACAGAGAACCCACATCAGAGTTGAAGAGCCCGTGGGCCACAGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 72 bp GACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATaGAGAGCATTGAGGGATCCAGATGAGGTGTGGTCC +
Preference number: 3 (lower is better)
Translates to: DRWESCWPCSDG*RALRDPDEVWS
Trigger: GGACCACACCTCATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR GCA 72 bp TCCTCCAGGAGCCTCCAATCACTCCTCAGCTTCAGGTaGAGGCAGGCCTTGGGCTATAAACACAGCCACACC +
Preference number: 3 (lower is better)
Translates to: SSRSLQSLLSFR*RQALGYKHSHT
Trigger: GGTGTGGCTGTGTTTATAGCCCAAGGCCTGCCTGCACCTGAAGCTGAGGAGTGATTGGAGGCTCCTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp GTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTaGCCCTGCTCAGATGGATGCAGAGCATTGAGGGAT +
Preference number: 3 (lower is better)
Translates to: VPPSSKDRWESC*PCSDGCRALRD
Trigger: ATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 72 bp CTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTaGGATGGGCAAGGGACAGGTGGCCCTATGAGCACC +
Preference number: 3 (lower is better)
Translates to: LPVAAVSWIPGG*DGQGTGGPMST
Trigger: GGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 72 bp ACCAGTGTAACTGCCATCTTCAATGGTGATGGGCAGTaGGGAGGACAGAACAGGCCGACTGGTCCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: TSVTAIFNGDGQ*GGQNRPTGPAL
Trigger: CAGGGCAGGACCAGTCGGCCTGTTCTGTCCTCCCCACTGCCCATCACCATTGAAGATGGCAGTTACACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 72 bp CTCAGATGGGACCAGTGTAACTGCCATCTTCAATGGTaGTGGGCAGTGGGGAGGACAGAACAGGCCGACTGG +
Preference number: 3 (lower is better)
Translates to: LRWDQCNCHLQW*WAVGRTEQADW
Trigger: CCAGTCGGCCTGTTCTGTCCTCCCCACTGCCCATCACCATTGAAGATGGCAGTTACACTGGTCCCATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp TCCAATCACTCCTCAGCTTCAGGTGCAGGCAGGCCTTaGGCTATAAACACAGCCACACCCACCACAGGCTAC +
Preference number: 3 (lower is better)
Translates to: SNHSSASGAGRP*AINTATPTTGY
Trigger: GTAGCCTGTGGTGGGTGTGGCTGTGTTTATAGCCCAAGGCCTGCCTGCACCTGAAGCTGAGGAGTGATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CAA 90 bp CCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCGTCCACTGTTTCAAATaGGTGGCCTCTGGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PIPRSRLSPLFQIGGLWSVHCFK*VASGPS
Trigger: GGAGGGACCAGAGGCCACCAATTTGAAACAGTGGAC...GGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR TCA 72 bp CACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTaGGCTCAATGGAGGCTTATAGGTGTCACCGGAGAG +
Preference number: 3 (lower is better)
Translates to: HRGAGSSLRHPL*AQWRLIGVTGE
Trigger: CTCTCCGGTGACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp CAGAACGCTATTTGGATAGAGTTAGATCACCAGAGGTaGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTC +
Preference number: 3 (lower is better)
Translates to: QNAIWIELDHQR*PWHETGQAPGL
Trigger: GAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTCTATCCAAATAGCGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp TATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTaGTGGCCTCTGGTCCCTCCCAGTTCCAAGGACAGG +
Preference number: 3 (lower is better)
Translates to: YPKVPTQSTVSN*WPLVPPSSKDR
Trigger: CCTGTCCTTGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CCA 72 bp GGGACACCAACATGGCCAAGAAGGTCCGTCACACACTaGACATTCACAGCGAGACAGCAACCTGGAGAACCA +
Preference number: 3 (lower is better)
Translates to: GTPTWPRRSVTH*TFTARQQPGEP
Trigger: TGGTTCTCCAGGTTGCTGTCTCGCTGTGAATGTCCAGTGTGTGACGGACCTTCTTGGCCATGTTGGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CAA 90 bp TCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCAGATGGATGCAGAGCATaGAGGGATCCAGATGAGGTG +
Preference number: 3 (lower is better)
Translates to: SRLSPLFQIGGLWSLPVPDGCRA*RDPDEV
Trigger: CACCTCATCTGGATCCCTCAATGCTCTGCATCCATC...TGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR-3UTR CAA 90 bp CCTATGAGCACCAGTCACATATTTCAGGCCTATCCCAAGGTCCCGACTCAGTCCGTCCACTGTTTCAAATaGGTGGCCTCTGGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PMSTSHIFQAYPKVPTQSVHCFK*VASGPS
Trigger: GGAGGGACCAGAGGCCACCAATTTGAAACAGTGGAC...GGACTGAGTCGGGACCTTGGGATAGGCCTGAAATATGTGACTGGTGCTCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR TCA 72 bp CCCACCAGTCGGACACAGGAAAGGTTCAACTCACCCTaGGAATGCAGCCCTGAATTCCACCCACATGTCCTA +
Preference number: 3 (lower is better)
Translates to: PTSRTQERFNSP*ECSPEFHPHVL
Trigger: TAGGACATGTGGGTGGAATTCAGGGCTGCATTCTCAGGGTGAGTTGAACCTTTCCTGTGTCCGACTGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 72 bp ATGTTCTGGAGATCTCGAGTCCAGGGTCTGGTACCATaGCACCATCTCAGCCACTGGTGTCAGCAGCTTGCA +
Preference number: 3 (lower is better)
Translates to: MFWRSRVQGLVP*HHLSHWCQQLA
Trigger: TGCAAGCTGCTGACACCAGTGGCTGAGATGGTGTCATGGTACCAGACCCTGGACTCGAGATCTCCAGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp GCTATTTGGATAGAGTTAGATCACCAGAGGTGGCCCTaGCATGAAACAGGGCAGGCGCCTGGACTCCACAAA +
Preference number: 3 (lower is better)
Translates to: AIWIELDHQRWP*HETGQAPGLHK
Trigger: TTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTCTATCCAAATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp GGAGTCAACAGTTCACTCCCTGTAGCTGCAGTTTCTTaGATACCAGGAGGTTGGGATGGGCAAGGGACAGGT +
Preference number: 3 (lower is better)
Translates to: GVNSSLPVAAVS*IPGGWDGQGTG
Trigger: ACCTGTCCCTTGCCCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp CGTCACACACTGGACATTCACAGCGAGACAGCAACCTaGAGAACCACATGGGAACACAGACACTGTGACCTG +
Preference number: 3 (lower is better)
Translates to: RHTLDIHSETAT*RTTWEHRHCDL
Trigger: CAGGTCACAGTGTCTGTGTTCCCATGTGGTTCTCCAGGTTGCTGTCTCGCTGTGAATGTCCAGTGTGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp GGGATTTCTAAAGACCTGAGAGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTGGCTCTGGACCATGTA +
Preference number: 3 (lower is better)
Translates to: GISKDLRDLAVF*WRGHLVALDHV
Trigger: TACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR-3UTR CAA 90 bp CGGTTCCCTTGTGGAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTAAGGGACAACTTCTGTaGTGTGGCTTGTCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: RFPCGRTKHPQSAEGKRSKGQLL*CGLSPK
Trigger: CTTTGGAGACAAGCCACACAACAGAAGTTGTCCCTT...ACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTCCACAAGGGAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 72 bp AGCAACCTGGAGAACCACATGGGAACACAGACACTGTaGCCTGAGGGATGTGTTAAGGCAGGAGATGGGAGT +
Preference number: 3 (lower is better)
Translates to: SNLENHMGTQTL*PEGCVKAGDGS
Trigger: ACTCCCATCTCCTGCCTTAACACATCCCTCAGGTCACAGTGTCTGTGTTCCCATGTGGTTCTCCAGGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp ACTCATCTTTACCTCTACCTTGGCACTAAGCAGGACTaGGCTGAGGGCCAAGTTAGCACACTTGGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: THLYLYLGTKQD*AEGQVSTLGGK
Trigger: CTTTCCCCCAAGTGTGCTAACTTGGCCCTCAGCCCAGTCCTGCTTAGTGCCAAGGTAGAGGTAAAGATGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CAA 90 bp TCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTATGGTCCTACTCTGTGGGAAGATGGATGCAGAGCATaGAGGGATCCAGATGAGGTG +
Preference number: 3 (lower is better)
Translates to: SAEGKRSIIWRYGPTLWEDGCRA*RDPDEV
Trigger: CACCTCATCTGGATCCCTCAATGCTCTGCATCCATC...TTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CAA 90 bp GAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTTGTAGCTGCAGTTTCTaGGATACCAGGAGGTTGGGA +
Preference number: 3 (lower is better)
Translates to: EGPSILSQQRARGVSFGGCSCSF*DTRRLG
Trigger: TCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACA...ACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 72 bp CCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCTTCTaGCTCCCAAGTGAAAAATGTACTTCTCCACTGGAA +
Preference number: 3 (lower is better)
Translates to: PGWPRTQKSACF*LPSEKCTSPLE
Trigger: TTCCAGTGGAGAAGTACATTTTTCACTTGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp CATAGAACCAGCCACCATCCCAAGCAGAACGCTATTTaGATAGAGTTAGATCACCAGAGGTGGCCCTGGCAT +
Preference number: 3 (lower is better)
Translates to: HRTSHHPKQNAI*IELDHQRWPWH
Trigger: ATGCCAGGGCCACCTCTGGTGATCTAACTCTATCCAAATAGCGTTCTGCTTGGGATGGTGGCTGGTTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
3UTR CCA 72 bp ATTTCTAAAGACCTGAGAGATCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCTCTGGACCATGTACAT +
Preference number: 3 (lower is better)
Translates to: ISKDLRDLAVFW*RGHLVALDHVH
Trigger: ATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCTTTAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
3UTR TCA 72 bp TGTCCTGGTAGCCCAAGCAGGTGCTTCCAGAACCTGTaGGATCCAGGTAATTCAGCAATATCCACATCTGCA +
Preference number: 3 (lower is better)
Translates to: CPGSPSRCFQNL*DPGNSAISTSA
Trigger: TGCAGATGTGGATATTGCTGAATTACCTGGATCTCACAGGTTCTGGAAGCACCTGCTTGGGCTACCAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp GAAGGTATAGTAGACTCCATCCAGATTCAAAGGTGCTaGGACCTGAGACCCTCAGGTCATGAGAAACAGCCT +
Preference number: 3 (lower is better)
Translates to: EGIVDSIQIQRC*DLRPSGHEKQP
Trigger: AGGCTGTTTCTCATGACCTGAGGGTCTCAGGTCCCAGCACCTTTGAATCTGGATGGAGTCTACTATACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp CATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTaGAGGTATGGTCCTACTCTGTGGGAACCTTTCATC +
Preference number: 3 (lower is better)
Translates to: HPQSAEGKRSII*RYGPTLWEPFI
Trigger: GATGAAAGGTTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR TCA 72 bp CCACTGGAACTGGAACTAAAAGTCGCAGGGTTGCCATaGAGGGTAACCATGACACTCCCAAATAGCCTACAT +
Preference number: 3 (lower is better)
Translates to: PLELELKVAGLP*RVTMTLPNSLH
Trigger: ATGTAGGCTATTTGGGAGTGTCATGGTTACCCTTCATGGCAACCCTGCGACTTTTAGTTCCAGTTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR GCA 72 bp ACTGAAGGTATAGTAGACTCCATCCAGATTCAAAGGTaGTGGGACCTGAGACCCTCAGGTCATGAGAAACAG +
Preference number: 3 (lower is better)
Translates to: TEGIVDSIQIQR*WDLRPSGHEKQ
Trigger: CTGTTTCTCATGACCTGAGGGTCTCAGGTCCCAGCACCTTTGAATCTGGATGGAGTCTACTATACCTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp GTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTATaGTCCTACTCTGTGGGAACCTTTCATCCAATGATA +
Preference number: 3 (lower is better)
Translates to: VSRGQEEYHLEV*SYSVGTFHPMI
Trigger: TATCATTGGATGAAAGGTTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CCA 72 bp CACACTTGGGGGAAAGGGTATAGAAGAGGCTCTGTCTaGTACCCAAAAGTAGAACAAAGAATGATGTTCTGG +
Preference number: 3 (lower is better)
Translates to: HTWGKGYRRGSV*YPKVEQRMMFW
Trigger: CCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCCTCTTCTATACCCTTTCCCCCAAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR-3UTR CAA 90 bp ATTCTGAGCAGTTACAAGGTTGAGCCTCCCTTTACATCCACTATAGGATTTAATGACTCTCCTCTAATGTaGAAAGCAGCAGATCATGTC +
Preference number: 3 (lower is better)
Translates to: ILSSYKVEPPFTSTIGFNDSPLM*KAADHV
Trigger: GACATGATCTGCTGCTTTCAACATTAGAGGAGAGTC...ATTAAATCCTATAGTGGATGTAAAGGGAGGCTCAACCTTGTAACTGCTCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp GGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGCAGCAGCGCCACGGTaGAGATCACCCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GAIEHGLPGGPSPKPGPKAAAPR*RSPSLG
Trigger: CCCGAGGCTGGGTGATCTTCACCGTGGCGCTGCTGC...CTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCGGGCAATGGCCAACGTaGGGTCATCCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGGQWPT*GHPRWG
Trigger: GCCCCACCTGGGATGACCCCACGTTGGCCATTGCCC...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCCCATCACCTGGCTGTTaGCGGTGGCCCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGPSPGC*RWPVGG
Trigger: TCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGG...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp ACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGGCCCTCATGGACGAGGGGATCCAGATCTaGGCTGCAACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TGQAPGLHKYWVGGALMDEGIQI*AATRWG
Trigger: GCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTC...GTCCATGAGGGCCCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp AAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCGTTTCCGCCAGCGCTTaGAGCGGCCACACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KGAIEHGLPGGPSPKPGPVSASA*SGHTRW
Trigger: CCACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAAC...GGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp GGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGTTTCCGCCAGCGCTTaGAGCGGCCACACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGMKQGRRLDSTNTGWEVSASA*SGHTRW
Trigger: CCACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAAC...CTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGWPVGG*RRMHLQ
Trigger: CTGAAGGTGCATACGACGTCATCCTCCCACGGGCCA...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGGAGGGGATCCAGATCTaGGCTGCAACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PWHETGQAPGLHKYWVGGEGIQI*AATRWG
Trigger: GCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTC...CCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCTGGGGTCATCCCAGGTaGGGCTATGGTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGWGHPR*GYGAAR
Trigger: ACGAGCAGCACCATAGCCCCACCTGGGATGACCCCA...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GAGTTAGATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCGGGCAATGGCCAACGTaGGGTCATCCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELDHQRWPWHETGQAPGLGQWPT*GHPRWG
Trigger: GCCCCACCTGGGATGACCCCACGTTGGCCATTGCCC...GAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGGCCATCTCGGTGGGCTaGTACACGCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PWHETGQAPGLHKYWVGGAISVG*YTLVSS
Trigger: GCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGC...CCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTGTTGGCGGTGGCCCGTaGGAGGATGACGTCGTATGC +
Preference number: 4 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGVGGGP*EDDVVC
Trigger: GCATACGACGTCATCCTCCCACGGGCCACCGCCAAC...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGGGGCGGTGGCGTGGCCACCTaGTGGCTCTGGACCATGTAC +
Preference number: 4 (lower is better)
Translates to: LGGRGPHGHPTKHQQIRGGGVAT*WLWTMY
Trigger: GTACATGGTCCAGAGCCACCAGGTGGCCACGCCACC...GCCCCTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCAACCAGGTGGGGCATaGTTCTGGGCCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGQPGGA*FWAKAP
Trigger: AGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTG...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp AAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCCAACCAGGTGGGGCATaGTTCTGGGCCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KGAIEHGLPGGPSPKPGPQPGGA*FWAKAP
Trigger: AGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTG...GGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp AGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGAGCAGGAAGAACACCTaGGTCCCCAAGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: REGSHRAWAPWWSLTQTRSRKNT*VPKRLR
Trigger: GCGGAGCCTCTTGGGGACCCAGGTGTTCTTCCTGCT...CCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGTGGGGTCATCCCAGGTaGGGCTATGGTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GGPGMKQGRRLDSTNTGWWGHPR*GYGAAR
Trigger: ACGAGCAGCACCATAGCCCCACCTGGGATGACCCCA...CCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCCAAAGGTCCAGGCATTaGCAGCGAGGGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGQRSRH*QRGQWP
Trigger: TGGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTG...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp AGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGGGCGTGGCCACCTGGTaGCTCTGGACCATGTACATG +
Preference number: 4 (lower is better)
Translates to: REGSHRAWAPWWSLTQTRGVATW*LWTMYM
Trigger: CATGTACATGGTCCAGAGCCACCAGGTGGCCACGCC...CCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGCGTCTTTTGGTGGCGTaGCCACCTGGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPGMKQGRRLDSTNTGWERLLVA*PPGGSG
Trigger: TCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACG...CTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GPGMKQGRRLDSTNTGWELAVFW*RGHLVA
Trigger: AGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAG...CTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
3UTR CAA 72 bp GGCTCTGGACCATGTACATGTCTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCACCTGGCTGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSGPCTCLRPAG*SWHCPSPGCWR
Trigger: CCGCCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAGACATGTACATGGTCCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS-3UTR TCA 90 bp CCAGGAGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: PGGWDGQGTGGPMSTSHIFGPQG*VGTAHH
Trigger: GTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAA...TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCGATCCAGATCTGGGCTaGAACCAGGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGDPDLG*NQVGHD
Trigger: ATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATC...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCAGAAGAGACCCAGGGTaGCCAGCAGGAAGAACACCT +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGRRDPG*PAGRTP
Trigger: AGGTGTTCTTCCTGCTGGGCACCCTGGGTCTCTTCT...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp AAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KGAIEHGLPGGPSPKPGPGLSWH*PSPGCW
Trigger: CCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCC...GGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAAAGCAGGAAGAACACCTaGGTCCCCAAGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: DHQRWPWHETGQAPGLHKSRKNT*VPKRLR
Trigger: GCGGAGCCTCTTGGGGACCCAGGTGTTCTTCCTGCT...TTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCAGCGGCCACACAAGGTaGGCCAGGCTCCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSSGHTR*ARLLGR
Trigger: CCTTCCTAGGAGCCTGGCCCACCTTGTGTGGCCGCT...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCAGGAGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATAAGCGGCCACACAAGGTaGGCCAGGCTCCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGGWDGQGTGGPMSTSHISGHTR*ARLLGR
Trigger: CCTTCCTAGGAGCCTGGCCCACCTTGTGTGGCCGCT...TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCTCTGCTCCTTCAGGATaGTCTCATAGCCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGSAPSG*SHSPPL
Trigger: GAGGGGTGGGCTATGAGACCATCCTGAAGGAGCAGA...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGATCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: WPWHETGQAPGLHKYWVGSGPSR*AGTRWS
Trigger: TGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGA...TCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp ATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATGTTGGCGGTGGCCCGTaGGAGGATGACGTCGTATGC +
Preference number: 4 (lower is better)
Translates to: ITRGGPGMKQGRRLDSTNVGGGP*EDDVVC
Trigger: GCATACGACGTCATCCTCCCACGGGCCACCGCCAAC...ATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSPAGLS*HCPSPG
Trigger: GCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGG...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GGPGMKQGRRLDSTNTGWDLAVF*WRGHLV
Trigger: CACCAGGTGGCCACGCCACCAAAAGACGGCAAGATC...CCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
3UTR CAA 72 bp GGGAGGATGACGTCGTATGCACCTTCAGACGGGCCTTaGTGCATCAGGGCCATCTCGGTGGGCTGGTACACG +
Preference number: 4 (lower is better)
Translates to: GRMTSYAPSDGP*CIRAISVGWYT
Trigger: CGTGTACCAGCCCACCGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS-3UTR TCA 90 bp GCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGGCCACTGGTCTCTTTGCTaGGGCTGGTTCGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: AIEHGLPGGPSPKPGPKGHWSLC*GWFVHR
Trigger: TCTATGGACGAACCAGCCTCAGCAAAGAGACCAGTG...GCCCTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGTTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWFGPQG*VGTAHH
Trigger: GTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAA...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTTGTCGTGATGATGCCTaGTCCAGCCACTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGCRDDA*SSHCLQ
Trigger: TTGGAGGCAGTGGCTGGAGCAGGCATCATCACGACA...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGAGTCCATGTTGGCGATaGCACACGGAGAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GAIEHGLPGGPSPKPGPKSPCWR*HTERSW
Trigger: CCATGACCTCTCCGTGTGCCATCGCCAACATGGACT...CTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCAGGAGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATGGGGTCATCCCAGGTaGGGCTATGGTGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PGGWDGQGTGGPMSTSHIWGHPR*GYGAAR
Trigger: ACGAGCAGCACCATAGCCCCACCTGGGATGACCCCA...TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp GAGTTAGATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCAAAGGTCCAGGCATTaGCAGCGAGGGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: ELDHQRWPWHETGQAPGLQRSRH*QRGQWP
Trigger: TGGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTG...GAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GTGGCCTCTGGTCCCTCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTGGTAGCTCTGTTCTaGGCTAGGTTTGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: VASGPSQFQGQVGKLLALLVALF*ARFGHL
Trigger: CAGGTGACCAAACCTAGCCCAGAACAGAGCTACCAG...CAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGAGGGACCAGAGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp ACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGGCCCTCATGGACCTGGTAGCTCTGTTCTaGGCTAGGTTTGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TGQAPGLHKYWVGGALMDLVALF*ARFGHL
Trigger: CAGGTGACCAAACCTAGCCCAGAACAGAGCTACCAG...GTCCATGAGGGCCCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGGGGCTCTGCTCCTTCAGGATaGTCTCATAGCCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: LGGRGPHGHPTKHQQIRGSAPSG*SHSPPL
Trigger: GAGGGGTGGGCTATGAGACCATCCTGAAGGAGCAGA...GCCCCTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCGCCATCTCGGTGGGCTaGTACACGCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPDSVHCFKLVASGPSQFAISVG*YTLVSS
Trigger: GCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGC...GAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp AGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCAGTTGGCGGTGGCCCGTaGGAGGATGACGTCGTATGC +
Preference number: 4 (lower is better)
Translates to: SSKDRWESCWPCSDGCRAVGGGP*EDDVVC
Trigger: GCATACGACGTCATCCTCCCACGGGCCACCGCCAAC...TGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGCCCATCACCTGGCTGTTaGCGGTGGCCCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGWARDRWPYEHQSHISGPSPGC*RWPVGG
Trigger: TCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGG...GCCTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTCCATCACCTGGCTGTTaGCGGTGGCCCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SQRSRIQPKASSLSSMEAPSPGC*RWPVGG
Trigger: TCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGG...AGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGCCACCTGGTGGCTCTaGACCATGTACATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GGPGMKQGRRLDSTNTGWATWWL*TMYMSS
Trigger: CGAAGACATGTACATGGTCCAGAGCCACCAGGTGGC...CCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCAGGAGGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATAGGCGTGGCCACCTGGTaGCTCTGGACCATGTACATG +
Preference number: 4 (lower is better)
Translates to: PGGWDGQGTGGPMSTSHIGVATW*LWTMYM
Trigger: CATGTACATGGTCCAGAGCCACCAGGTGGCCACGCC...TATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCCCAGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQFQGQVGKLLALLRWMQLAVFW*RGHLVA
Trigger: AGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAG...CTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp ATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ITRGGPGMKQGRRLDSTNLAVFW*RGHLVA
Trigger: AGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAG...ATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp GGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCAACCAGGTGGGGCATaGTTCTGGGCCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPDSVHCFKLVASGPSQFQPGGA*FWAKAP
Trigger: AGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTG...GAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp CCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCGTTTCCGCCAGCGCTTaGAGCGGCCACACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PIPRSRLSPLFQIGGLWSVSASA*SGHTRW
Trigger: CCACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAAC...GGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCACTGGTCTCTTTGCTaGGGCTGGTTCGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGHWSLC*GWFVHR
Trigger: TCTATGGACGAACCAGCCTCAGCAAAGAGACCAGTG...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp TCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: SQRSRIQPKASSLSSMEAFGPQG*VGTAHH
Trigger: GTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAA...AGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp CCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCTTCGGCCCGCAGGGTTaGGTTGGCACTGCCCATCAC +
Preference number: 4 (lower is better)
Translates to: PIPRSRLSPLFQIGGLWSFGPQG*VGTAHH
Trigger: GTGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAA...GGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp TGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGATGTCGTGATGATGCCTaGTCCAGCCACTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: WPWHETGQAPGLHKYWVGCRDDA*SSHCLQ
Trigger: TTGGAGGCAGTGGCTGGAGCAGGCATCATCACGACA...TCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GAAAGCAGCAGATCATGTCCATGTGTCCCAAGGACGGCTGCTGCCCAAACTGAGGAGGGGATCCAGATCTaGGCTGCAACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ESSRSCPCVPRTAAAQTEEGIQI*AATRWG
Trigger: GCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTC...CTCAGTTTGGGCAGCAGCCGTCCTTGGGACACATGGACATGATCTGCTGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp GCGGCAGATCTTGGGGCTCTAGATCAAGAACAGTGTGAGGTGCATGGAGACCGGAGCAGGAAGAACACCTaGGTCCCCAAGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AADLGALDQEQCEVHGDRSRKNT*VPKRLR
Trigger: GCGGAGCCTCTTGGGGACCCAGGTGTTCTTCCTGCT...CCGGTCTCCATGCACCTCACACTGTTCTTGATCTAGAGCCCCAAGATCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGAGCGGCCACACAAGGTaGGCCAGGCTCCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQSGHTR*ARLLGR
Trigger: CCTTCCTAGGAGCCTGGCCCACCTTGTGTGGCCGCT...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGTGGCAGCGAGGGCAATaGCCAACGTGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQWQRGQ*PTWGHP
Trigger: GGGATGACCCCACGTTGGCCATTGCCCTCGCTGCCA...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp AGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGCTGGTAGCTCTGTTCTaGGCTAGGTTTGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: REGSHRAWAPWWSLTQTRLVALF*ARFGHL
Trigger: CAGGTGACCAAACCTAGCCCAGAACAGAGCTACCAG...CCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: DHQRWPWHETGQAPGLHKWAGTR*SAAVHC
Trigger: ACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCA...TTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCGCCATCTCGGTGGGCTaGTACACGCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AYPKVPTQSTVSNWWPLVAISVG*YTLVSS
Trigger: GCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGC...GACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp GCGGCAGATCTTGGGGCTCTAGATCAAGAACAGTGTGAGGTGCATGGAGACCGGTCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AADLGALDQEQCEVHGDRSGPSR*AGTRWS
Trigger: TGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGA...CCGGTCTCCATGCACCTCACACTGTTCTTGATCTAGAGCCCCAAGATCTGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp CTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCCCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LSQGPDSVHCFKLVASGPPAGLS*HCPSPG
Trigger: GCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGG...GGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGGGCGTGGCCACCTGGTaGCTCTGGACCATGTACATG +
Preference number: 4 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWGVATW*LWTMYM
Trigger: CATGTACATGGTCCAGAGCCACCAGGTGGCCACGCC...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCGGTGGCGTGGCCACCTaGTGGCTCTGGACCATGTAC +
Preference number: 4 (lower is better)
Translates to: LSQGPDSVHCFKLVASGPGGVAT*WLWTMY
Trigger: GTACATGGTCCAGAGCCACCAGGTGGCCACGCCACC...GGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR TCA 90 bp GGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGAGGTTTGGTCACCTGTaGGACCTCAGGGATGACATA +
Preference number: 4 (lower is better)
Translates to: GGPGMKQGRRLDSTNTGWRFGHL*DLRDDI
Trigger: TATGTCATCCCTGAGGTCTCACAGGTGACCAAACCT...CCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp TGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: WESCWPCSDGCRALRDPDWPVGG*RRMHLQ
Trigger: CTGAAGGTGCATACGACGTCATCCTCCCACGGGCCA...ATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCGATCCAGATCTGGGCTaGAACCAGGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSDPDLG*NQVGHD
Trigger: ATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATC...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTCTGCCTCCAAGACAATaGCCCAGGCCCCCGAGCGGT +
Preference number: 4 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCLPPRQ*PRPPSG
Trigger: ACCGCTCGGGGGCCTGGGGCATTGTCTTGGAGGCAG...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp ATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATATGCTCTGGCCCGTCTaGTCCTTCAGGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ITRGGPGMKQGRRLDSTNMLWPV*SFRMVS
Trigger: TGAGACCATCCTGAAGGAGCAGACGGGCCAGAGCAT...ATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp CCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCATGCTCTGGCCCGTCTaGTCCTTCAGGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PKVPTQSTVSNWWPLVPPMLWPV*SFRMVS
Trigger: TGAGACCATCCTGAAGGAGCAGACGGGCCAGAGCAT...GGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp GAGTTAGATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCAGACCTGAGAGATCTTaGCGTCTTTTGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ELDHQRWPWHETGQAPGLRPERS*RLLVAW
Trigger: CCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCT...GAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CTGGCCACAGCTGCTGCCTTAGTCCCACACGTAGGGATTTCTAAAGACCTGAGAGAGGGGATCCAGATCTaGGCTGCAACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LATAAALVPHVGISKDLREGIQI*AATRWG
Trigger: GCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTC...TCTCAGGTCTTTAGAAATCCCTACGTGTGGGACTAAGGCAGCAGCTGTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS-3UTR CCA 90 bp GAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTGGGCAATGGCCAACGTaGGGTCATCCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EGPSILSQQRARGVSFGGGQWPT*GHPRWG
Trigger: GCCCCACCTGGGATGACCCCACGTTGGCCATTGCCC...ACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGTGGCAGCGAGGGCAATaGCCAACGTGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMWQRGQ*PTWGHP
Trigger: GGGATGACCCCACGTTGGCCATTGCCCTCGCTGCCA...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CCCTATGAGCACCAGTCACATATTTCAGGCCTATCCCAAGGTCCCGACTCAGTCTGGCAGCGAGGGCAATaGCCAACGTGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: PYEHQSHISGLSQGPDSVWQRGQ*PTWGHP
Trigger: GGGATGACCCCACGTTGGCCATTGCCCTCGCTGCCA...GACTGAGTCGGGACCTTGGGATAGGCCTGAAATATGTGACTGGTGCTCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp GGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCAAAGGTCCAGGCATTaGCAGCGAGGGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: GPDSVHCFKLVASGPSQFQRSRH*QRGQWP
Trigger: TGGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTG...GAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCTGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSWAGTR*SAAVHC
Trigger: ACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCA...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGCCATCTCGGTGGGCTaGTACACGCTGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMAISVG*YTLVSS
Trigger: GCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGC...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCATCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRLSPLFQIGGLWSLPVPSGPSR*AGTRWS
Trigger: TGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGA...TGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCAGGCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGTTGGCGGTGGCCCGTaGGAGGATGACGTCGTATGC +
Preference number: 4 (lower is better)
Translates to: SGLSQGPDSVHCFKLVASVGGGP*EDDVVC
Trigger: GCATACGACGTCATCCTCCCACGGGCCACCGCCAAC...AGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTGCACTGCCCATCACCTaGCTGTTGGCGGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCALPIT*LLAVAR
Trigger: ACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGC...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp CAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATGGGCACTGCCCATCACCTaGCTGTTGGCGGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: QQFTPCSCSFLDTRRLGWALPIT*LLAVAR
Trigger: ACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGC...CCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp CAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCGCCACCTGGTGGCTCTaGACCATGTACATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: QVGKLLALLRWMQSIEGSATWWL*TMYMSS
Trigger: CGAAGACATGTACATGGTCCAGAGCCACCAGGTGGC...GGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCAGGCGTGGCCACCTGGTaGCTCTGGACCATGTACATG +
Preference number: 4 (lower is better)
Translates to: SRLSPLFQIGGLWSLPVPGVATW*LWTMYM
Trigger: CATGTACATGGTCCAGAGCCACCAGGTGGCCACGCC...TGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp GGCATAAGCTACCCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTGGTGGCGTGGCCACCTaGTGGCTCTGGACCATGTAC +
Preference number: 4 (lower is better)
Translates to: GISYPEPVRREGSHRAWAGGVAT*WLWTMY
Trigger: GTACATGGTCCAGAGCCACCAGGTGGCCACGCCACC...AGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGGGTAGCTTATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATCGTCTTTTGGTGGCGTaGCCACCTGGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WESCWPCSDGCRALRDPDRLLVA*PPGGSG
Trigger: TCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACG...ATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCACGTCTTTTGGTGGCGTaGCCACCTGGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRLSPLFQIGGLWSLPVPRLLVA*PPGGSG
Trigger: TCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACG...TGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR TCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGCAACCAGGTGGGGCATaGTTCTGGGCCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMQPGGA*FWAKAP
Trigger: AGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTG...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMWPVGG*RRMHLQ
Trigger: CTGAAGGTGCATACGACGTCATCCTCCCACGGGCCA...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp GTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGAGATCCAGATCTGGGCTaGAACCAGGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: VGKLLALLRWMQSIEGSRDPDLG*NQVGHD
Trigger: ATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATC...TCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp GCGGCAGATCTTGGGGCTCTAGATCAAGAACAGTGTGAGGTGCATGGAGACCGGTGTCGTGATGATGCCTaGTCCAGCCACTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AADLGALDQEQCEVHGDRCRDDA*SSHCLQ
Trigger: TTGGAGGCAGTGGCTGGAGCAGGCATCATCACGACA...CCGGTCTCCATGCACCTCACACTGTTCTTGATCTAGAGCCCCAAGATCTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp GGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GWDGQGTGGPMSTSHIFQGLSWH*PSPGCW
Trigger: CCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCC...CTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp CCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PIPRSRLSPLFQIGGLWSGLSWH*PSPGCW
Trigger: CCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCC...GGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp CCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGACCTGAGAGATCTTaGCGTCTTTTGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PKVPTQSTVSNWWPLVPPRPERS*RLLVAW
Trigger: CCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCT...GGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCAGACCTGAGAGATCTTaGCGTCTTTTGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSRPERS*RLLVAW
Trigger: CCACGCCACCAAAAGACGGCAAGATCTCTCAGGTCT...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTAGTGTCCTGCACAAATaGAAGGCTAGCCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGSVLHK*KASHKD
Trigger: ATCCTTGTGGCTAGCCTTCCATTTGTGCAGGACACT...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000122967.3
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGTCCATGTTGGCGATaGCACACGGAGAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SKDRWESCWPCSDGCRALSPCWR*HTERSW
Trigger: CCATGACCTCTCCGTGTGCCATCGCCAACATGGACT...CAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGTCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMSGPSR*AGTRWS
Trigger: TGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGA...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GTCAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATCCATCACCTGGCTGTTaGCGGTGGCCCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNSSLPVAAVSWIPGGWDPSPGC*RWPVGG
Trigger: TCCTCCCACGGGCCACCGCCAACAGCCAGGTGATGG...ATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTCCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCPAGLS*HCPSPG
Trigger: GCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGG...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
3UTR CAA 72 bp CTCCAATCACTCCTCAGCTTCAGGTGCAGGCAGGCCTaGGGCTATAAACACAGCCACACCCACCACAGGCTA +
Preference number: 4 (lower is better)
Translates to: LQSLLSFRCRQA*GYKHSHTHHRL
Trigger: TAGCCTGTGGTGGGTGTGGCTGTGTTTATAGCCCAAGGCCTGCCTGCACCTGAAGCTGAGGAGTGATTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp ATCACCAGAGGTGGCCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATAGGTTTGGTCACCTGTaGGACCTCAGGGATGACATA +
Preference number: 4 (lower is better)
Translates to: ITRGGPGMKQGRRLDSTNRFGHL*DLRDDI
Trigger: TATGTCATCCCTGAGGTCTCACAGGTGACCAAACCT...ATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGGCCACCTCTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGATGCTCTGGCCCGTCTaGTCCTTCAGGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQMLWPV*SFRMVS
Trigger: TGAGACCATCCTGAAGGAGCAGACGGGCCAGAGCAT...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGTCTGCTCCTTCAGGATaGTCTCATAGCCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: GWDGQGTGGPMSTSHIFQSAPSG*SHSPPL
Trigger: GAGGGGTGGGCTATGAGACCATCCTGAAGGAGCAGA...CTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp TTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGCTGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: LGWARDRWPYEHQSHISGWAGTR*SAAVHC
Trigger: ACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCA...GCCTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp GGTTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGTGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: GWDGQGTGGPMSTSHIFQWAGTR*SAAVHC
Trigger: ACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCA...CTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATGCCACCTGGTGGCTCTaGACCATGTACATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WESCWPCSDGCRALRDPDATWWL*TMYMSS
Trigger: CGAAGACATGTACATGGTCCAGAGCCACCAGGTGGC...ATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTGCCACCTGGTGGCTCTaGACCATGTACATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: SQRSRIQPKASSLSSMEAATWWL*TMYMSS
Trigger: CGAAGACATGTACATGGTCCAGAGCCACCAGGTGGC...AGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTCGTCTTTTGGTGGCGTaGCCACCTGGTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCRLLVA*PPGGSG
Trigger: TCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACG...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: EGPSILSQQRARGVSFGGLAVFW*RGHLVA
Trigger: AGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAG...ACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp CCTATGAGCACCAGTCACATATTTCAGGCCTATCCCAAGGTCCCGACTCAGTCCGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: PMSTSHIFQAYPKVPTQSDLAVF*WRGHLV
Trigger: CACCAGGTGGCCACGCCACCAAAAGACGGCAAGATC...GGACTGAGTCGGGACCTTGGGATAGGCCTGAAATATGTGACTGGTGCTCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMDLAVF*WRGHLV
Trigger: CACCAGGTGGCCACGCCACCAAAAGACGGCAAGATC...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
3UTR CAA 72 bp CTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATaGGTGGCCTCTGGTCCCTCCCAGTTCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LSQGPDSVHCFK*VASGPSQFQGQ
Trigger: CTGTCCTTGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR TCA 90 bp GCCCTAAGTAGGGTAAGGGACAACTTCTGTTGTGTGGCTTGTCTCCAAAGACTCTGGCCCGTGGGAGGATaGCGTCGTATGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSRVRDNFCCVACLQRLWPVGG*RRMHLQ
Trigger: CTGAAGGTGCATACGACGTCATCCTCCCACGGGCCA...GAGTCTTTGGAGACAAGCCACACAACAGAAGTTGTCCCTTACCCTACTTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp CTGGCCACAGCTGCTGCCTTAGTCCCACACGTAGGGATTTCTAAAGACCTGAGAGATCCAGATCTGGGCTaGAACCAGGTGGGGCATGAT +
Preference number: 4 (lower is better)
Translates to: LATAAALVPHVGISKDLRDPDLG*NQVGHD
Trigger: ATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATC...TCTCAGGTCTTTAGAAATCCCTACGTGTGGGACTAAGGCAGCAGCTGTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS-3UTR GCA 90 bp GGCATAAGCTACCCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTAGAAGAGACCCAGGGTaGCCAGCAGGAAGAACACCT +
Preference number: 4 (lower is better)
Translates to: GISYPEPVRREGSHRAWARRDPG*PAGRTP
Trigger: AGGTGTTCTTCCTGCTGGGCACCCTGGGTCTCTTCT...AGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGGGTAGCTTATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp TCAGGCCTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTAGAAGAGACCCAGGGTaGCCAGCAGGAAGAACACCT +
Preference number: 4 (lower is better)
Translates to: SGLSQGPDSVHCFKLVASRRDPG*PAGRTP
Trigger: AGGTGTTCTTCCTGCTGGGCACCCTGGGTCTCTTCT...AGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTGGGTTGAGTTGGCACTaGCCATCACCTGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCGLSWH*PSPGCW
Trigger: CCAACAGCCAGGTGATGGGCAGTGCCAACTCAACCC...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp TACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGAGTCCATGTTGGCGATaGCACACGGAGAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: YSSQRSRIQPKASSLSSMSPCWR*HTERSW
Trigger: CCATGACCTCTCCGTGTGCCATCGCCAACATGGACT...CATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp GAAAGCAGCAGATCATGTCCATGTGTCCCAAGGACGGCTGCTGCCCAAACTGAGAGGTTTGGTCACCTGTaGGACCTCAGGGATGACATA +
Preference number: 4 (lower is better)
Translates to: ESSRSCPCVPRTAAAQTERFGHL*DLRDDI
Trigger: TATGTCATCCCTGAGGTCTCACAGGTGACCAAACCT...CTCAGTTTGGGCAGCAGCCGTCCTTGGGACACATGGACATGATCTGCTGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp TGTCTCCAAAGACTCACAAAGATTCACCTGATGTCCATTGTGAGACATGCTGACGCACTGCCCATCACCTaGCTGTTGGCGGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CLQRLTKIHLMSIVRHADALPIT*LLAVAR
Trigger: ACGGGCCACCGCCAACAGCCAGGTGATGGGCAGTGC...GTCAGCATGTCTCACAATGGACATCAGGTGAATCTTTGTGAGTCTTTGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CCA 90 bp CTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGAGTCCAGGGGGTGGCGTGGCCACCTaGTGGCTCTGGACCATGTAC +
Preference number: 4 (lower is better)
Translates to: LVPKSRTKNDVLEISSPGGGVAT*WLWTMY
Trigger: GTACATGGTCCAGAGCCACCAGGTGGCCACGCCACC...CCCTGGACTCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CAA 72 bp GGCTATCCTGGGAATCCACTCATCTTTACCTCTACCTaGGCACTAAGCAGGACTGGGCTGAGGGCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GYPGNPLIFTST*ALSRTGLRAKL
Trigger: TAACTTGGCCCTCAGCCCAGTCCTGCTTAGTGCCAAGGTAGAGGTAAAGATGAGTGGATTCCCAGGATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp CAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATGGCACTGGTCTCTTTGCTaGGGCTGGTTCGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: QQFTPCSCSFLDTRRLGWHWSLC*GWFVHR
Trigger: TCTATGGACGAACCAGCCTCAGCAAAGAGACCAGTG...CCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR GCA 90 bp CTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGGGGCTTCGTCCATAGAAAATaGCTTGTTCTCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: LGGRGPHGHPTKHQQIRGFVHRK*LVLHKH
Trigger: ATGTTTGTGGAGAACAAGGCATTTTCTATGGACGAA...GCCCCTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGACCCGCAGGGTTGAGTTaGCACTGCCCATCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRPAGLS*HCPSPG
Trigger: GCCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGG...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp TACCCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGGGATTTCTAAAGACCTaGGAGATCTTGCCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: YPEPVRREGSHRAWAPWWGFLKT*EILPSF
Trigger: AAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCC...CCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR TCA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGGGATTTCTAAAGACCTaGGAGATCTTGCCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWGFLKT*EILPSF
Trigger: AAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCC...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR GCA 90 bp GCCCTAAGTAGGGTAAGGGACAACTTCTGTTGTGTGGCTTGTCTCCAAAGACTCGATCCTGAGAGATCTTaGCGTCTTTTGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALSRVRDNFCCVACLQRLDPERS*RLLVAW
Trigger: CCACGCCACCAAAAGACGGCAAGATCTCTCAGGATC...GAGTCTTTGGAGACAAGCCACACAACAGAAGTTGTCCCTTACCCTACTTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CAA 72 bp CAAGCCTGGACCTACTTGATGTCTCCCACTCAAGGCTaGTGTATGATACAGAGCTGTTCATTTGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAWTYLMSPTQG*CMIQSCSFGGP
Trigger: GGGGCCTCCAAATGAACAGCTCTGTATCATACACAAGCCTTGAGTGGGAGACATCAAGTAGGTCCAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp TGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATGGATTTCTAAAGACCTaGGAGATCTTGCCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: WESCWPCSDGCRALRDPDGFLKT*EILPSF
Trigger: AAAAGACGGCAAGATCTCTCAGGTCTTTAGAAATCC...ATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152314.2
CDS-3UTR CCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGAGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRDLAVF*WRGHLV
Trigger: CACCAGGTGGCCACGCCACCAAAAGACGGCAAGATC...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
3UTR CAA 72 bp GCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTaGGAGGTATGGTCCTACTCTGTGGGAACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: ASSVSRGQEEYH*EVWSYSVGTFH
Trigger: ATGAAAGGTTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR TCA 90 bp GGCTCTGTCTGGTACCCAAAAGTAGAACAAAGAATGATGTTCTGGAGATCTCGACACTGGTCTCTTTGCTaGGGCTGGTTCGTCCATAGA +
Preference number: 4 (lower is better)
Translates to: GSVWYPKVEQRMMFWRSRHWSLC*GWFVHR
Trigger: TCTATGGACGAACCAGCCTCAGCAAAGAGACCAGTG...TCGAGATCTCCAGAACATCATTCTTTGTTCTACTTTTGGGTACCAGACAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp TCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTTCGTCCATAGAAAATaGCTTGTTCTCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: SQRSRIQPKASSLSSMEAFVHRK*LVLHKH
Trigger: ATGTTTGTGGAGAACAAGGCATTTTCTATGGACGAA...AGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
3UTR CAA 72 bp CTGCAAATGATGAGCTTGGATCAAGCCTGGACCTACTaGATGTCTCCCACTCAAGGCTTGTGTATGATACAG +
Preference number: 4 (lower is better)
Translates to: LQMMSLDQAWTY*MSPTQGLCMIQ
Trigger: CTGTATCATACACAAGCCTTGAGTGGGAGACATCAAGTAGGTCCAGGCTTGATCCAAGCTCATCATTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp CAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATGGTTCGTCCATAGAAAATaGCTTGTTCTCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: QQFTPCSCSFLDTRRLGWFVHRK*LVLHKH
Trigger: ATGTTTGTGGAGAACAAGGCATTTTCTATGGACGAA...CCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
3UTR CAA 72 bp CATTTATTAAGGGATAGTGGCCTGCAAATGATGAGCTaGGATCAAGCCTGGACCTACTTGATGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: HLLRDSGLQMMS*DQAWTYLMSPT
Trigger: AGTGGGAGACATCAAGTAGGTCCAGGCTTGATCCAAGCTCATCATTTGCAGGCCACTATCCCTTAATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR GCA 90 bp ATTCTGAGCAGTTACAAGGTTGAGCCTCCCTTTACATCCACTATAGGATTTAATTTCGTCCATAGAAAATaGCTTGTTCTCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: ILSSYKVEPPFTSTIGFNFVHRK*LVLHKH
Trigger: ATGTTTGTGGAGAACAAGGCATTTTCTATGGACGAA...ATTAAATCCTATAGTGGATGTAAAGGGAGGCTCAACCTTGTAACTGCTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp GGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGCCCATCACCTGGCTGTaGGCGGTGGCCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GAIEHGLPGGPSPKPGPKPITWL*AVARGR
Trigger: CCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGG...CTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CCTGAACCAGTAAGAAGGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCCCATCACCTGGCTGTaGGCGGTGGCCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PEPVRREGSHRAWAPWWSPITWL*AVARGR
Trigger: CCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGG...GGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCCTTCTTACTGGTTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp GGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGGCCCGCAGGGTTGAGTaGGCACTGCCCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: GAIEHGLPGGPSPKPGPKARRVE*ALPITW
Trigger: CCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGC...CTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp GGGAAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: GKGAIEHGLPGGPSPKPGLRPAG*SWHCPS
Trigger: TGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAG...ACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CCCTGGCATGAAACAGGGCAGGCGCCTGGACTCCACAAATACTGGGTGGGAGGGCTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: PWHETGQAPGLHKYWVGGLRPAG*SWHCPS
Trigger: TGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAG...CCCTCCCACCCAGTATTTGTGGAGTCCAGGCGCCTGCCCTGTTTCATGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS CCA 90 bp AGAGGACAAAGGTCCAGGCATTGGCAGCGAGGGCAATGGCCAACGTaGGGTCATCCCAGGTGGGGCTATGGTGCTGCTCGTTGCCGTAGG +
Preference number: 5 (lower is better)
Translates to: RGQRSRHWQRGQWPT*GHPRWGYGAARCRR
Trigger: CCTACGGCAACGAGCAGCACCATAGCCCCACCTGGGATGACCCCACGTTGGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp GGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCAAGACAAAGGTCCAGGCATaGGCAGCGAGGGCAATGGCC +
Preference number: 5 (lower is better)
Translates to: GAIEHGLPGGPSPKPGPKTKVQA*AARAMA
Trigger: GGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTGT...CTTGGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp AAGGGAGCCATAGAGCATGGGCTCCCTGGTGGTCCCTCACCCAAACCAGGTCCCCCTTCAGACGGGCCTTaGTGCATCAGGGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: KGAIEHGLPGGPSPKPGPPSDGP*CIRAIS
Trigger: CGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGG...GGGACCTGGTTTGGGTGAGGGACCACCAGGGAGCCCATGCTCTATGGCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp TTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGCCCCATCACCTGGCTGTaGGCGGTGGCCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LGWARDRWPYEHQSHISGPITWL*AVARGR
Trigger: CCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGG...GCCTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp CTATCCCAAGGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCCCCATCACCTGGCTGTaGGCGGTGGCCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSQGPDSVHCFKLVASGPPITWL*AVARGR
Trigger: CCTCCCACGGGCCACCGCCAACAGCCAGGTGATGGG...GGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACCTTGGGATAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGGCCCGCAGGGTTGAGTaGGCACTGCCCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWARRVE*ALPITW
Trigger: CCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGC...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CGGTTCCCTTGTGGAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTGCCCGCAGGGTTGAGTaGGCACTGCCCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: RFPCGRTKHPQSAEGKRSARRVE*ALPITW
Trigger: CCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGC...ACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTCCACAAGGGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp TCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGGCCCGCAGGGTTGAGTaGGCACTGCCCATCACCTGG +
Preference number: 5 (lower is better)
Translates to: SKDRWESCWPCSDGCRALARRVE*ALPITW
Trigger: CCAGGTGATGGGCAGTGCCAACTCAACCCTGCGGGC...CAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp CTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGGGGCAGATCTTGCCGTCTTTaGGTGGCGTGGCCACCTGGT +
Preference number: 5 (lower is better)
Translates to: LGGRGPHGHPTKHQQIRGRSCRL*VAWPPG
Trigger: ACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCT...GCCCCTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS GCA 90 bp CCGAGCGGTCACAGAGGTTGTAGTAGAGGGGATCCAGATCTGGGCTaGAACCAGGTGGGGCATGATTCTGGGCCAAGGCTCCTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: PSGHRGCSRGDPDLG*NQVGHDSGPRLLGR
Trigger: TCTTCCCAGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTCTACTACAACCTCTGTGACCGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000122967.3
ENSMUST00000133245.2
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS CCA 90 bp GAGGTCATGGTCGAGTCGGCACTGACATTGCCCAGGGGGCTAACCTaGCCACCTCCCCGTACCAGGGTGATGATAAGCCACTCGGTGTTA +
Preference number: 5 (lower is better)
Translates to: EVMVESALTLPRGLT*PPPRTRVMISHSVL
Trigger: TAACACCGAGTGGCTTATCATCACCCTGGTACGGGGAGGTGGCCAGGTTAGCCCCCTGGGCAATGTCAGTGCCGACTCGACCATGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp AGTTCCAAGGACAGGTGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCACTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: SSKDRWESCWPCSDGCRALRPAG*SWHCPS
Trigger: TGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAG...TGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCACCTGTCCTTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS CCA 90 bp ACGGGCCTTTGTGCATCAGGGCCATCTCGGTGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGTAGCCACTGTAAGGTGACACTGGTC +
Preference number: 5 (lower is better)
Translates to: TGLCASGPSRWAGTR*SAAVHCSHCKVTLV
Trigger: GACCAGTGTCACCTTACAGTGGCTACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGATGCACAAAGGCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000152314.2
ENSMUST00000177952.8
CDS CCA 90 bp CGTATGCACCTTCAGACGGGCCTTTGTGCATCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCAGCAGCTGTCCATTGTAGCCACTGT +
Preference number: 5 (lower is better)
Translates to: RMHLQTGLCASGPSR*AGTRWSAAVHCSHC
Trigger: ACAGTGGCTACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGGTGCATACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000152314.2
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGCCTTCAGACGGGCCTTaGTGCATCAGGGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWPSDGP*CIRAIS
Trigger: CGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGG...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS CCA 90 bp ACAGAGGTTGTAGTAGAGGGGATCCAGATCTGGGCTGCAACCAGGTaGGGCATGATTCTGGGCCAAGGCTCCTGGGAAGAAGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TEVVVEGIQIWAATR*GMILGQGSWEEERQ
Trigger: CTGCCTCTCTTCTTCCCAGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTCTACTACAACCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000122967.3
ENSMUST00000133245.2
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS CCA 90 bp AACACGAGGCAGAAGAGACCCAGGGTGCCCAGCAGGAAGAACACCTaGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTGCACAAATGGA +
Preference number: 5 (lower is better)
Translates to: NTRQKRPRVPSRKNT*VPKRLRFLVSCTNG
Trigger: TCCATTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGGTGTTCTTCCTGCTGGGCACCCTGGGTCTCTTCTGCCTCGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGTGTTTCCGCCAGCGCTaGAAGCGGCCACACAAGGTG +
Preference number: 5 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQCFRQR*KRPHKV
Trigger: CACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAACA...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp TTGGGATGGGCAAGGGACAGGTGGCCCTATGAGCACCAGTCACATATTTCAGGCACAAAGGTCCAGGCATaGGCAGCGAGGGCAATGGCC +
Preference number: 5 (lower is better)
Translates to: LGWARDRWPYEHQSHISGTKVQA*AARAMA
Trigger: GGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTGT...GCCTGAAATATGTGACTGGTGCTCATAGGGCCACCTGTCCCTTGCCCATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp CAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATGGCTTCGGCCCGCAGGGTaGAGTTGGCACTGCCCATCA +
Preference number: 5 (lower is better)
Translates to: QQFTPCSCSFLDTRRLGWLRPAG*SWHCPS
Trigger: TGATGGGCAGTGCCAACTCAACCCTGCGGGCCGAAG...CCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp TCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCCAAGATCTTGCCGTCTTTaGGTGGCGTGGCCACCTGGT +
Preference number: 5 (lower is better)
Translates to: SRLSPLFQIGGLWSLPVPRSCRL*VAWPPG
Trigger: ACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCT...TGGAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp CGGTTCCCTTGTGGAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATGACAAAGTCCATGTaGGCGATGGCACACGGAGAG +
Preference number: 5 (lower is better)
Translates to: RFPCGRTKHPQSAEGKRSMTKSM*AMAHGE
Trigger: CTCTCCGTGTGCCATCGCCAACATGGACTTTGTCAT...ACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTCCACAAGGGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp GAAGGACCAAGCATCCTCAGTCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTTGTTTCCGCCAGCGCTaGAAGCGGCCACACAAGGTG +
Preference number: 5 (lower is better)
Translates to: EGPSILSQQRARGVSFGGCFRQR*KRPHKV
Trigger: CACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAACA...ACCTCCAAATGATACTCCTCTTGCCCTCTGCTGACTGAGGATGCTTGGTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp AGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTACAAAGGTCCAGGCATaGGCAGCGAGGGCAATGGCC +
Preference number: 5 (lower is better)
Translates to: SRIQPKASSLSSMEAYRCTKVQA*AARAMA
Trigger: GGCCATTGCCCTCGCTGCCAATGCCTGGACCTTTGT...ACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CAACAGTTCACTCCCTGTAGCTGCAGTTTCTTGGATACCAGGAGGTTGGGATGGCCTTCAGACGGGCCTTaGTGCATCAGGGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: QQFTPCSCSFLDTRRLGWPSDGP*CIRAIS
Trigger: CGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGG...CCATCCCAACCTCCTGGTATCCAAGAAACTGCAGCTACAGGGAGTGAACTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp ATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGGAGGCTTATAGGTGTCACCGGAGATCTTGCCGTCTTTaGGTGGCGTGGCCACCTGGT +
Preference number: 5 (lower is better)
Translates to: IQPKASSLSSMEAYRCHRRSCRL*VAWPPG
Trigger: ACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCT...CCGGTGACACCTATAAGCCTCCATTGAGCTCAGAGAGGATGCCTTAGGCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS CCA 90 bp TTTATTAGTCGGGGACTGATCCTGAGAGATCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCTCTGGACCATGTACATGTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: FISRGLILRDLAVFW*RGHLVALDHVHVFG
Trigger: GCCGAAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGATCAGTCCCCGACTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGATGACAAAGTCCATGTaGGCGATGGCACACGGAGAG +
Preference number: 5 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQMTKSM*AMAHGE
Trigger: CTCTCCGTGTGCCATCGCCAACATGGACTTTGTCAT...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp CCTTACTCCTCACAGAGGAGCAGGATCCAGCCTAAGGCATCCTCTCTGAGCTCAATGACAAAGTCCATGTaGGCGATGGCACACGGAGAG +
Preference number: 5 (lower is better)
Translates to: PYSSQRSRIQPKASSLSSMTKSM*AMAHGE
Trigger: CTCTCCGTGTGCCATCGCCAACATGGACTTTGTCAT...TGAGCTCAGAGAGGATGCCTTAGGCTGGATCCTGCTCCTCTGTGAGGAGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp TCAGCAGAGGGCAAGAGGAGTATCATTTGGAGGTATGGTCCTACTCTGTGGGAACCTTCAGACGGGCCTTaGTGCATCAGGGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: SAEGKRSIIWRYGPTLWEPSDGP*CIRAIS
Trigger: CGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAGG...TTCCCACAGAGTAGGACCATACCTCCAAATGATACTCCTCTTGCCCTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS-3UTR CAA 90 bp CTTACTGCGGCAGATCTTGGGGCTCTAGATCAAGAACAGTGTGAGGTGCATGGAAGATCTTGCCGTCTTTaGGTGGCGTGGCCACCTGGT +
Preference number: 5 (lower is better)
Translates to: LTAADLGALDQEQCEVHGRSCRL*VAWPPG
Trigger: ACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCT...TCCATGCACCTCACACTGTTCTTGATCTAGAGCCCCAAGATCTGCCGCAGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS TCA 90 bp CATGTCCCCCTGGTAGCTCTGTTCTGGGCTAGGTTTGGTCACCTGTaGGACCTCAGGGATGACATAGAAGAGGACAAAGGTCCAGGCATT +
Preference number: 5 (lower is better)
Translates to: HVPLVALFWARFGHL*DLRDDIEEDKGPGI
Trigger: AATGCCTGGACCTTTGTCCTCTTCTATGTCATCCCTGAGGTCTCACAGGTGACCAAACCTAGCCCAGAACAGAGCTACCAGGGGGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp GGTCCCGACTCAGTCCACTGTTTCAAATTGGTGGCCTCTGGTCCCTCCCAGTTCTCCATAGAAAATGCCTaGTTCTCCACAAACATGCTC +
Preference number: 5 (lower is better)
Translates to: GPDSVHCFKLVASGPSQFSIENA*FSTNML
Trigger: GAGCATGTTTGTGGAGAACAAGGCATTTTCTATGGA...GAACTGGGAGGGACCAGAGGCCACCAATTTGAAACAGTGGACTGAGTCGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS-3UTR CAA 90 bp CTCACCCAAACCAGGTCCCAAGGGCCCTCTCTAAATCAACCTGCTTCCTCCTGGTCCATAGAAAATGCCTaGTTCTCCACAAACATGCTC +
Preference number: 5 (lower is better)
Translates to: LTQTRSQGPSLNQPASSWSIENA*FSTNML
Trigger: GAGCATGTTTGTGGAGAACAAGGCATTTTCTATGGA...CCAGGAGGAAGCAGGTTGATTTAGAGAGGGCCCTTGGGACCTGGTTTGGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS GCA 90 bp AGGAAGAACACCTGGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTaGACAAATGGAAGGCTAGCCACAAGGATGATGGTTAACACAAAT +
Preference number: 5 (lower is better)
Translates to: RKNTWVPKRLRFLVS*TNGRLATRMMVNTN
Trigger: ATTTGTGTTAACCATCATCCTTGTGGCTAGCCTTCCATTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGGTGTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS GCA 90 bp TGGTCTCTTTGCTGGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTaGACAAATGGAAGGCTAGCCACAAGGATGATGGTTAACACAAAT +
Preference number: 5 (lower is better)
Translates to: WSLCWVPKRLRFLVS*TNGRLATRMMVNTN
Trigger: ATTTGTGTTAACCATCATCCTTGTGGCTAGCCTTCCATTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGCAAAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS-3UTR CAA 90 bp AATACTGGGTGGGAGGGGCCCTCATGGACACCCAACCAAACATCAGCAGATCAGTCCATAGAAAATGCCTaGTTCTCCACAAACATGCTC +
Preference number: 5 (lower is better)
Translates to: NTGWEGPSWTPNQTSADQSIENA*FSTNML
Trigger: GAGCATGTTTGTGGAGAACAAGGCATTTTCTATGGA...CTGATCTGCTGATGTTTGGTTGGGTGTCCATGAGGGCCCCTCCCACCCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021071.14
ENSMUST00000177952.8
CDS-3UTR CAA 90 bp TGGGAAAGCTGCTGGCCCTGCTCAGATGGATGCAGAGCATTGAGGGATCCAGATTCCATAGAAAATGCCTaGTTCTCCACAAACATGCTC +
Preference number: 5 (lower is better)
Translates to: WESCWPCSDGCRALRDPDSIENA*FSTNML
Trigger: GAGCATGTTTGTGGAGAACAAGGCATTTTCTATGGA...ATCTGGATCCCTCAATGCTCTGCATCCATCTGAGCAGGGCCAGCAGCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053361.12
ENSMUST00000152314.2
CDS CCA 72 bp AGGTCCAGGCATTGGCAGCGAGGGCAATGGCCAACGTaGGGTCATCCCAGGTGGGGCTATGGTGCTGCTCGT +
Preference number: 6 (lower is better)
Translates to: RSRHWQRGQWPT*GHPRWGYGAAR
Trigger: ACGAGCAGCACCATAGCCCCACCTGGGATGACCCCACGTTGGCCATTGCCCTCGCTGCCAATGCCTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8
CDS CAA 90 bp TTGGCGATGGCACACGGAGAGGTCATGGTCGAGTCGGCACTGACATaGCCCAGGGGGCTAACCTGGCCACCTCCCCGTACCAGGGTGATG +
Preference number: 6 (lower is better)
Translates to: LAMAHGEVMVESALT*PRGLTWPPPRTRVM
Trigger: CATCACCCTGGTACGGGGAGGTGGCCAGGTTAGCCCCCTGGGCAATGTCAGTGCCGACTCGACCATGACCTCTCCGTGTGCCATCGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS CCA 72 bp GTCGAGTCGGCACTGACATTGCCCAGGGGGCTAACCTaGCCACCTCCCCGTACCAGGGTGATGATAAGCCAC +
Preference number: 6 (lower is better)
Translates to: VESALTLPRGLT*PPPRTRVMISH
Trigger: GTGGCTTATCATCACCCTGGTACGGGGAGGTGGCCAGGTTAGCCCCCTGGGCAATGTCAGTGCCGACTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS CCA 72 bp CAGCGAGGGCAATGGCCAACGTGGGGTCATCCCAGGTaGGGCTATGGTGCTGCTCGTTGCCGTAGGTGTACA +
Preference number: 6 (lower is better)
Translates to: QRGQWPTWGHPR*GYGAARCRRCT
Trigger: TGTACACCTACGGCAACGAGCAGCACCATAGCCCCACCTGGGATGACCCCACGTTGGCCATTGCCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8
CDS CAA 72 bp GTGAGCAACACAAAGACCCCGTGTTTCCGCCAGCGCTaGAAGCGGCCACACAAGGTGGGCCAGGCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: VSNTKTPCFRQR*KRPHKVGQAPR
Trigger: CCTAGGAGCCTGGCCCACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAACACGGGGTCTTTGTGTTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS CAA 90 bp ATGACAGTGGTGAGCAACACAAAGACCCCGTGTTTCCGCCAGCGCTaGAAGCGGCCACACAAGGTGGGCCAGGCTCCTAGGAAGGCCGTC +
Preference number: 6 (lower is better)
Translates to: MTVVSNTKTPCFRQR*KRPHKVGQAPRKAV
Trigger: GACGGCCTTCCTAGGAGCCTGGCCCACCTTGTGTGGCCGCTTCAAGCGCTGGCGGAAACACGGGGTCTTTGTGTTGCTCACCACTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS TCA 72 bp AGGGGATCCAGATCTGGGCTGCAACCAGGTGGGGCATaGTTCTGGGCCAAGGCTCCTGGGAAGAAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: RGSRSGLQPGGA*FWAKAPGKKRG
Trigger: GCCTCTCTTCTTCCCAGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000122967.3
ENSMUST00000133245.2
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS CCA 72 bp CCACAAACATGCTCTGGCCCGTCTGCTCCTTCAGGATaGTCTCATAGCCCACCCCTCGGGTCGGGTACATGT +
Preference number: 6 (lower is better)
Translates to: PQTCSGPSAPSG*SHSPPLGSGTC
Trigger: ACATGTACCCGACCCGAGGGGTGGGCTATGAGACCATCCTGAAGGAGCAGACGGGCCAGAGCATGTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8
CDS CCA 72 bp CTTCAGACGGGCCTTTGTGCATCAGGGCCATCTCGGTaGGCTGGTACACGCTGGTCAGCAGCTGTCCATTGT +
Preference number: 6 (lower is better)
Translates to: LQTGLCASGPSR*AGTRWSAAVHC
Trigger: ACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGATGCACAAAGGCCCGTCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000152314.2
ENSMUST00000177952.8
CDS TCA 72 bp AGCCTCGGGGCCCATGGTTCTTCCGGGTTAGGAAGTTaGGGGAAAGGACGTGAGCTACCAGACAGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLGAHGSSGLGS*GKGRELPDRRS
Trigger: GCTTCTCCTGTCTGGTAGCTCACGTCCTTTCCCTCAACTTCCTAACCCGGAAGAACCATGGGCCCCGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000177952.8
CDS CCA 72 bp GTAGTAGAGGGGATCCAGATCTGGGCTGCAACCAGGTaGGGCATGATTCTGGGCCAAGGCTCCTGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: VVEGIQIWAATR*GMILGQGSWEE
Trigger: TTCTTCCCAGGAGCCTTGGCCCAGAATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTCTACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000122967.3
ENSMUST00000133245.2
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS CCA 72 bp GCGGTCACAGAGGTTGTAGTAGAGGGGATCCAGATCTaGGCTGCAACCAGGTGGGGCATGATTCTGGGCCAA +
Preference number: 6 (lower is better)
Translates to: AVTEVVVEGIQI*AATRWGMILGQ
Trigger: TTGGCCCAGAATCATGCCCCACCTGGTTGCAGCCCAGATCTGGATCCCCTCTACTACAACCTCTGTGACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000122967.3
ENSMUST00000133245.2
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS CCA 72 bp TGTGCATCAGGGCCATCTCGGTGGGCTGGTACACGCTaGTCAGCAGCTGTCCATTGTAGCCACTGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: CASGPSRWAGTR*SAAVHCSHCKV
Trigger: CACCTTACAGTGGCTACAATGGACAGCTGCTGACCAGCGTGTACCAGCCCACCGAGATGGCCCTGATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000152314.2
ENSMUST00000177952.8
CDS CCA 72 bp CGGGGACTGATCCTGAGAGATCTTGCCGTCTTTTGGTaGCGTGGCCACCTGGTGGCTCTGGACCATGTACAT +
Preference number: 6 (lower is better)
Translates to: RGLILRDLAVFW*RGHLVALDHVH
Trigger: ATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGATCAGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS CCA 72 bp AGTCGGGGACTGATCCTGAGAGATCTTGCCGTCTTTTaGTGGCGTGGCCACCTGGTGGCTCTGGACCATGTA +
Preference number: 6 (lower is better)
Translates to: SRGLILRDLAVF*WRGHLVALDHV
Trigger: TACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGATCAGTCCCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS GCA 72 bp ACCTGGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTaGACAAATGGAAGGCTAGCCACAAGGATGATGGTT +
Preference number: 6 (lower is better)
Translates to: TWVPKRLRFLVS*TNGRLATRMMV
Trigger: AACCATCATCCTTGTGGCTAGCCTTCCATTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000136785.2
ENSMUST00000142262.2
ENSMUST00000177952.8
CDS GCA 72 bp TGCTGGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTaGACAAATGGAAGGCTAGCCACAAGGATGATGGTT +
Preference number: 6 (lower is better)
Translates to: CWVPKRLRFLVS*TNGRLATRMMV
Trigger: AACCATCATCCTTGTGGCTAGCCTTCCATTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS CCA 72 bp ACTGATCCTGAGAGATCTTGCCGTCTTTTGGTGGCGTaGCCACCTGGTGGCTCTGGACCATGTACATGTCTT +
Preference number: 6 (lower is better)
Translates to: TDPERSCRLLVA*PPGGSGPCTCL
Trigger: AAGACATGTACATGGTCCAGAGCCACCAGGTGGCCACGCCACCAAAAGACGGCAAGATCTCTCAGGATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053361.12
CDS CAA 90 bp TCAGCAGCTGTCCATTGTAGCCACTGTAAGGTGACACTGGTCTCTTaGCTGGGTCCCCAAGAGGCTCCGCTTCTTAGTGTCCTGCACAAA +
Preference number: 6 (lower is better)
Translates to: SAAVHCSHCKVTLVS*LGPQEAPLLSVLHK
Trigger: TTTGTGCAGGACACTAAGAAGCGGAGCCTCTTGGGGACCCAGCAAAGAGACCAGTGTCACCTTACAGTGGCTACAATGGACAGCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122967.3
CDS TCA 72 bp CTGGTAGCTCTGTTCTGGGCTAGGTTTGGTCACCTGTaGGACCTCAGGGATGACATAGAAGAGGACAAAGGT +
Preference number: 6 (lower is better)
Translates to: LVALFWARFGHL*DLRDDIEEDKG
Trigger: ACCTTTGTCCTCTTCTATGTCATCCCTGAGGTCTCACAGGTGACCAAACCTAGCCCAGAACAGAGCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021071.14
ENSMUST00000053361.12
ENSMUST00000177952.8