Pregenerated sensors for GPR89 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028096Ensembl transcript IDs: ENSMUST00000029738.14
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAGTGAGTGGTGGCCCTGCTTCCCTGGGGTAGTCCCCAGCCAGTaGCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSEWWPCFPGVVPSQ*LMPMLPSDTGWPTC Trigger: GCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCACTGGCTGGGGACTACCCCAGGGAAGCAGGGCCACCACTCACTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | CTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTaGCGACCCCGTCAGACCTCCTCTGGACCATCTGTCCCCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: LPLEGPGTASPRNEP*RPRQTSSGPSVPQT Trigger: AGTCTGGGGGACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | CCTCTCCTCCTCACTGCACAGCCTCAGATCCATGCGGCTCCCTGCTaGATGCTGCGGGTTTTCTTCTTGTGCCTCAGTCGAAGTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: PLLLTAQPQIHAAPC*MLRVFFLCLSRSDS Trigger: GGAGTCACTTCGACTGAGGCACAAGAAGAAAACCCGCAGCATTCAGCAGGGAGCCGCATGGATCTGAGGCTGTGCAGTGAGGAGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | ATCCTAAGATGGGGGCGTGATGCCTTCAGCCCAGCACATGTTCAGTaGAGTGCTTTGCCAGTGTGGCTGAGCCCAGTGGAGTTCAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: ILRWGRDAFSPAHVQ*SALPVWLSPVEFRV Trigger: CACCCTGAACTCCACTGGGCTCAGCCACACTGGCAAAGCACTGCACTGAACATGTGCTGGGCTGAAGGCATCACGCCCCCATCTTAGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | GGCTCAGAGCCCACAGAGGACGCGGAGGGTCACAAGCCCAAGCTCTaGAGGCTGCTTAAAGAGGACGATAGCTACGGCTTTCACCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: GSEPTEDAEGHKPKL*RLLKEDDSYGFHLN Trigger: ATTCAGGTGAAAGCCGTAGCTATCGTCCTCTTTAAGCAGCCTGCAGAGCTTGGGCTTGTGACCCTCCGCGTCCTCTGTGGGCTCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | CTGCTGACAAGGCTGGGCTGGAGAATGAGGACGTCATCATCGAAGTaGACGGGGAGAACGTGCAAGAGGAACCCTACGACAGAGTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LLTRLGWRMRTSSSK*TGRTCKRNPTTEWW Trigger: CCACCACTCTGTCGTAGGGTTCCTCTTGCACGTTCTCCCCGTTCACTTCGATGATGACGTCCTCATTCTCCAGCCCAGCCTTGTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | AAAGGAGCGCAGTTAACAAGTGTTGAGGCTGTTCAGGAGGGAAGCTaGCCGGCACGCCTTCTTCCATGCTTGGAACCGACTCAGAACCTC | + |
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Preference number: 1 (lower is better) Translates to: KGAQLTSVEAVQEGS*PARLLPCLEPTQNL Trigger: GAGGTTCTGAGTCGGTTCCAAGCATGGAAGAAGGCGTGCCGGGCAGCTTCCCTCCTGAACAGCCTCAACACTTGTTAACTGCGCTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 90 bp | CAGAACAGAACTCGCAGCTCTGCCTGTGTAAAGAGCTGTAGGCTCTaGTCTCCCCACTGTGTCTCCTTTCCTGAAGTTGGCAGGGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QNRTRSSACVKSCRL*SPHCVSFPEVGRES Trigger: AGACTCCCTGCCAACTTCAGGAAAGGAGACACAGTGGGGAGACCAGAGCCTACAGCTCTTTACACAGGCAGAGCTGCGAGTTCTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 90 bp | AGAGCAATGAGACCACCCTGTAGCTTCCAAGTTGGGATCCTAAGATaGGGGCGTGATGCCTTCAGCCCAGCACATGTTCAGTGCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RAMRPPCSFQVGILR*GRDAFSPAHVQCSA Trigger: AGCACTGCACTGAACATGTGCTGGGCTGAAGGCATCACGCCCCCATCTTAGGATCCCAACTTGGAAGCTACAGGGTGGTCTCATTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | AGCACAGCCTCGCACTCTTCGTCTAACTCTGAAGACACGGAGATGTaGAGAGAACAAATGATGCTTCCTCTTGAGGGCCCAGGAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: STASHSSSNSEDTEM*REQMMLPLEGPGTA Trigger: GGCAGTTCCTGGGCCCTCAAGAGGAAGCATCATTTGTTCTCTTCACATCTCCGTGTCTTCAGAGTTAGACGAAGAGTGCGAGGCTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | ACTCTTCGTCTAACTCTGAAGACACGGAGATGTGAAGAGAACAAATaGTGCTTCCTCTTGAGGGCCCAGGAACTGCCTCTCCGAGGAATG | + |
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Preference number: 1 (lower is better) Translates to: TLRLTLKTRRCEENK*CFLLRAQELPLRGM Trigger: CATTCCTCGGAGAGGCAGTTCCTGGGCCCTCAAGAGGAAGCATCATTTGTTCTCTTCACATCTCCGTGTCTTCAGAGTTAGACGAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | ACAGGGTGGCCAACCTGCCAGGGTTTTGTGACAAAGGAGGCATTATaGGGACAAATTTATTGTCTTCTTAGAAATGTGGCCTCACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: TGWPTCQGFVTKEAL*GQIYCLLRNVASLW Trigger: CCACAGTGAGGCCACATTTCTAAGAAGACAATAAATTTGTCCTCATAATGCCTCCTTTGTCACAAAACCCTGGCAGGTTGGCCACCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 90 bp | GCTCAACTTAGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTaGTATCTTCCAAAGTGCAACTTTTCACTTCTGTTGATGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: AQLSQRRDQVQGLSM*YLPKCNFSLLLMRP Trigger: AGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTAAGTTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 90 bp | CTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTGTaGCAAAGGAGGCATTATGAGGACAAATTTATTGTCTTCTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: LCFPVTQGGQPARVL*QRRHYEDKFIVFLE Trigger: TTCTAAGAAGACAATAAATTTGTCCTCATAATGCCTCCTTTGTCACAAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 90 bp | CAAAGGAGGCATTATGAGGACAAATTTATTGTCTTCTTAGAAATGTaGCCTCACTGTGGAGCCCAGGCTGGTGTAGAACTTGCAATCCTC | + |
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Preference number: 1 (lower is better) Translates to: QRRHYEDKFIVFLEM*PHCGAQAGVELAIL Trigger: GAGGATTGCAAGTTCTACACCAGCCTGGGCTCCACAGTGAGGCCACATTTCTAAGAAGACAATAAATTTGTCCTCATAATGCCTCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | ACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAGCCCAAAACATaGAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: TNISCFLICFQKPKT*KIHTVVLVIKGGFQ Trigger: CTGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 90 bp | CGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTTaGTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: RIVSLFHTNISCFLI*FQKPKTCKIHTVVL Trigger: TAAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATGGAACAAAGACACTATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGGAGACCTCTTCCTTCTaGAGGCTTGAGCACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PLRGMSPADPVRPPLDHLETSSF*RLEHLG Trigger: TCCCAGGTGCTCAAGCCTGCAGAAGGAAGAGGTCTC...CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CAA 90 bp | TGGGGGCGTGATGCCTTCAGCCCAGCACATGTTCAGTGCAGTGCTTaGCCAGTGTGGCTGAGCCCAGTGGAGTTCAGGGTGTATAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: WGRDAFSPAHVQCSA*PVWLSPVEFRVYRP Trigger: TGGCCTATACACCCTGAACTCCACTGGGCTCAGCCACACTGGCAAAGCACTGCACTGAACATGTGCTGGGCTGAAGGCATCACGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTGTCTACCTCCAGCGCTaGGGCAGAGGGAAAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: CLMPMLPSDTGWPTCQGFVYLQR*GRGKAN Trigger: GTTGGCTTTCCCTCTGCCTCAGCGCTGGAGGTAGAC...AAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTGCTGTGCTGGACAAGTaGCCCCAAGGCCAGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CLMPMLPSDTGWPTCQGFAVLDK*PQGQSV Trigger: AACACTCTGGCCTTGGGGTCACTTGTCCAGCACAGC...AAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTCCCTCTCCTCCTCACTaGACAGCCTCAGATCCATGC | + |
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Preference number: 2 (lower is better) Translates to: CLMPMLPSDTGWPTCQGFPSPPH*TASDPC Trigger: GCATGGATCTGAGGCTGTGCAGTGAGGAGGAGAGGG...AAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | GACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCACGTCACTCTGTTGGTCCATGCGGCTCCCTGCTaGATGCTGCGGGTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: DRVVERIKSSGKHVTLLVHAAPC*MLRVFF Trigger: GAAGAAAACCCGCAGCATTCAGCAGGGAGCCGCATG...GACCAACAGAGTGACGTGCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTGCAGGCTTGAGCACCTaGGATGATTCACTGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: CLMPMLPSDTGWPTCQGFAGLST*DDSLSM Trigger: CATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGC...AAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | CCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTCCGCCTCTGAGAAAAAGACCGAGTGAGTaGTGGCCCTGCTTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PQVSVTLTVVTLGSPPLRKRPSE*WPCFPG Trigger: CCCAGGGAAGCAGGGCCACCACTCACTCGGTCTTTT...TCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTGCAGGCTGCTTAAAGAGGACGATAGCTACGGCTTTCACCTGAATGCCAGGTGCCTGGCTCTCTaGCTTAAGGCATGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: KLCRLLKEDDSYGFHLNARCLAL*LKACQL Trigger: GAGCTGGCATGCCTTAAGTCAGAGAGCCAGGCACCT...GGCATTCAGGTGAAAGCCGTAGCTATCGTCCTCTTTAAGCAGCCTGCAGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | CCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTCCGCCTCTGAGAAGTGCTTTGCCAGTGTaGCTGAGCCCAGTGGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PQVSVTLTVVTLGSPPLRSALPV*LSPVEF Trigger: GAACTCCACTGGGCTCAGCCACACTGGCAAAGCACT...TCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTCCGCCTCTGAGACTCCCTGCTGAATGCTaGGGGTTTTCTTCTTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PQVSVTLTVVTLGSPPLRLPAEC*GFSSCA Trigger: GGCACAAGAAGAAAACCCGCAGCATTCAGCAGGGAG...TCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTCCGCCTCTGAGAAGTGCCTCATGCCTATaGTTCCCAGTGACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PQVSVTLTVVTLGSPPLRSASCL*FPVTQG Trigger: ACCCTGTGTCACTGGGAAGCATAGGCATGAGGCACT...TCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGAGACCGAGTGAGTGGTaGCCCTGCTTCCCTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKRPSEW*PCFPGV Trigger: TACCCCAGGGAAGCAGGGCCACCACTCACTCGGTCT...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTGCAGGCTGCTTAAAGAGGACGATAGCTACGGCTTTCACCTGAATGCCCGGGGTAAAGTTGGGTaGGGGGAGAGATGCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KLCRLLKEDDSYGFHLNARGKVG*GERCIS Trigger: TGAAATGCATCTCTCCCCTCACCCAACTTTACCCCG...GGCATTCAGGTGAAAGCCGTAGCTATCGTCCTCTTTAAGCAGCCTGCAGAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGGGTATCCTCATGCTCTaGCCCTCTCCTCCTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKGILML*PSPPHC Trigger: GCAGTGAGGAGGAGAGGGCCAGAGCATGAGGATACC...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGAGGAACCCTACGACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCCACTCTGTTGGTCTGTaGAAAGATGGCCTACAGCTA | + |
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Preference number: 2 (lower is better) Translates to: CKRNPTTEWWRESRAAGSHSVGL*KDGLQL Trigger: TAGCTGTAGGCCATCTTTCCACAGACCAACAGAGTG...GCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTCGTAGGGTTCCTCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTACCCGAGCCAGCCACTaGTGGATTAGCACGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: LARGGTRFRVFLCGIFQSTRASH*WISTEH Trigger: ATGTTCCGTGCTAATCCAGCAGTGGCTGGCTCGGGT...ACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCAGAGGAGGGACCAGGTTCAGGGTCTTTCTATGTGGTATCTTCCAAAGTGAGGAAGTAGGCGTGTaGCTGAGGCAGAACAGAACT | + |
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Preference number: 2 (lower is better) Translates to: LARGGTRFRVFLCGIFQSEEVGV*LRQNRT Trigger: AGTTCTGTTCTGCCTCAGGCACACGCCTACTTCCTC...ACTTTGGAAGATACCACATAGAAAGACCCTGAACCTGGTCCCTCCTCTGGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCATGCCTATGCTTCCCAGTGACACAGGGTGGCCAACCTGCCAGGGTTTTGCTGCTACTGCAGGTTaGTTATTTAAGCTCAACTTA | + |
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Preference number: 2 (lower is better) Translates to: CLMPMLPSDTGWPTCQGFAATAG*LFKLNL Trigger: TAAGTTGAGCTTAAATAAGCAACCTGCAGTAGCAGC...AAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGCTCTTTCCTGCTGCAGTAAACCCTTGTCTTTTTCCTTTGCACAGACTAACACCAAGCTGTGCTaGACAAGTGACCCCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLALSCCSKPLSFSFAQTNTKLC*TSDPKA Trigger: GGCCTTGGGGTCACTTGTCCAGCACAGCTTGGTGTT...AGTCTGTGCAAAGGAAAAAGACAAGGGTTTACTGCAGCAGGAAAGAGCAAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCACGTCACTCTGTTGGTCGTAAAATCTATCTGTTaGCTATCACCCCTTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: DRVVERIKSSGKHVTLLVVKSIC*LSPLSQ Trigger: CTGAGAAAGGGGTGATAGGCAACAGATAGATTTTAC...GACCAACAGAGTGACGTGCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGAGGAACCCTACGACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCTCATGCTTTCTCATTTaGTTCCAGAAGCCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: CKRNPTTEWWRESRAAGSSCFLI*FQKPKT Trigger: TGTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGA...GCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTCGTAGGGTTCCTCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTGTGAAGAGAACAAATaGTGCTTCCTCTTGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKCEENK*CFLLRA Trigger: GGCCCTCAAGAGGAAGCATCATTTGTTCTCTTCACA...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAACAGCCTCAGATCCATaGGGCTCCCTGCTGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: AQNMQNTHCGLSNKGRLPTASDP*GSLLNA Trigger: AGCATTCAGCAGGGAGCCGCATGGATCTGAGGCTGT...TGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | GACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCACGTCACTCTGTTGGTCTGGTATCTTCCAAAGTaGAACTTTTCACTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: DRVVERIKSSGKHVTLLVWYLPK*NFSLLL Trigger: CAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCA...GACCAACAGAGTGACGTGCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAAAGAGCTGTAGGCTCTaGTCTCCCCACTGTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AQNMQNTHCGLSNKGRLPKSCRL*SPHCVS Trigger: GGAGACACAGTGGGGAGACCAGAGCCTACAGCTCTT...TGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CAA 90 bp | GGTCTTTCTATGTGGTATCTTCCAAAGTGCAACTTTTCACTTCTGTaGATGAGACCTCTTCCTTCTGCAGGCTTGAGCACCTGGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: GLSMWYLPKCNFSLL*MRPLPSAGLSTWDD Trigger: ATCATCCCAGGTGCTCAAGCCTGCAGAAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTTGCACTTTGGAAGATACCACATAGAAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGGAAGACACGGAGATGTaGAGAGAACAAATGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKEDTEM*REQMML Trigger: AAGCATCATTTGTTCTCTTCACATCTCCGTGTCTTC...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGCAGAAGCCCAAAACATaGAAAATACACACTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKQKPKT*KIHTVV Trigger: GACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTG...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCTGCAGGCTGCTTAAAGAGGACGATAGCTACGGCTTTCACCTGAATGCCTGTTTAAACTGTGCCTaGCTCACAGTAAGTAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLCRLLKEDDSYGFHLNACLNCA*LTVSKN Trigger: GTTTTTACTTACTGTGAGCCAGGCACAGTTTAAACA...GGCATTCAGGTGAAAGCCGTAGCTATCGTCCTCTTTAAGCAGCCTGCAGAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTCAGTGCAAGCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTGGAAGCAAGTCAAGTaGAGATTCGGATTACATCTA | + |
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Preference number: 2 (lower is better) Translates to: FSVQATSLRDTNSGHTWKWKQVK*RFGLHL Trigger: TAGATGTAATCCGAATCTTCACTTGACTTGCTTCCA...CTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGCTTGCACTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGCTCTTTCCTGCTGCAGTAAACCCTTGTCTTTTTCCTTTGCACAGACTCAGGGTCTTTCTATGTaGTATCTTCCAAAGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLALSCCSKPLSFSFAQTQGLSM*YLPKCN Trigger: GTTGCACTTTGGAAGATACCACATAGAAAGACCCTG...AGTCTGTGCAAAGGAAAAAGACAAGGGTTTACTGCAGCAGGAAAGAGCAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTAAAAACAGAGAGAGAGGCTTAGACTCCATGTTTAGTAAGTGTCAGGAACGGGTTTTCTTCTTGTaGCTCAGTCGAAGTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VSKNRERGLDSMFSKCQERVFFL*LSRSDS Trigger: GGAGTCACTTCGACTGAGGCACAAGAAGAAAACCCG...TTCCTGACACTTACTAAACATGGAGTCTAAGCCTCTCTCTCTGTTTTTACTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CAA 90 bp | CCGAATAGTGTCTTTGTTCCATACAAACATTTCATGCTTTCTCATTaGCTTCCAGAAGCCCAAAACATGCAAAATACACACTGTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PNSVFVPYKHFMLSH*LPEAQNMQNTHCGL Trigger: AAGACCACAGTGTGTATTTTGCATGTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATGGAACAAAGACACTATTCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR TCA 90 bp | GTAAGTAAAAACAGAGAGAGAGGCTTAGACTCCATGTTTAGTAAGTGTCAGGAAGAATCAGGCCTCCTATaGAAAGTCACTATAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VSKNRERGLDSMFSKCQEESGLL*KVTIVF Trigger: GAAAACTATAGTGACTTTTCATAGGAGGCCTGATTC...TTCCTGACACTTACTAAACATGGAGTCTAAGCCTCTCTCTCTGTTTTTACTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CAA 90 bp | TTGTTTGCAACTTCCCTGTTGGCTAATAGAATCCGAATAGTGTCTTaGTTCCATACAAACATTTCATGCTTTCTCATTTGCTTCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LFATSLLANRIRIVS*FHTNISCFLICFQK Trigger: CTTCTGGAAGCAAATGAGAAAGCATGAAATGTTTGTATGGAACAAAGACACTATTCGGATTCTATTAGCCAACAGGGAAGTTGCAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | GAGGGCCCAGGAACTGCCTCTCCGAGGAATGAGCCCTaGCGACCCCGTCAGACCTCCTCTGGACCATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: EGPGTASPRNEP*RPRQTSSGPSV Trigger: GACAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGGCAGTTCCTGGGCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | TGGGGGCGTGATGCCTTCAGCCCAGCACATGTTCAGTaGAGTGCTTTGCCAGTGTGGCTGAGCCCAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: WGRDAFSPAHVQ*SALPVWLSPVE Trigger: CTCCACTGGGCTCAGCCACACTGGCAAAGCACTGCACTGAACATGTGCTGGGCTGAAGGCATCACGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | AAGTCCGCCTCTGAGAGTGCTCCTTGCCCACTGCTGTaGATGTGCACGGTGCCTGAACCCTGTAGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KSASESAPCPLL*MCTVPEPCRGE Trigger: CTCTCCCCTACAGGGTTCAGGCACCGTGCACATCCACAGCAGTGGGCAAGGAGCACTCTCAGAGGCGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | AGTCCCCAGCCAGTGCCTCATGCCTATGCTTCCCAGTaGCACAGGGTGGCCAACCTGCCAGGGTTTTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SPQPVPHAYASQ*HRVANLPGFCD Trigger: GTCACAAAACCCTGGCAGGTTGGCCACCCTGTGTCACTGGGAAGCATAGGCATGAGGCACTGGCTGGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | AAAGGGCTTGTTCCAGTTAACGTCTACCTCCAGCGCTaGGGCAGAGGGAAAGCCAACCCGAGCCAGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: KGLVPVNVYLQR*GRGKANPSQPL Trigger: CAGTGGCTGGCTCGGGTTGGCTTTCCCTCTGCCTCAGCGCTGGAGGTAGACGTTAACTGGAACAAGCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | CTCACTGCACAGCCTCAGATCCATGCGGCTCCCTGCTaGATGCTGCGGGTTTTCTTCTTGTGCCTCAGTCGA | + |
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Preference number: 3 (lower is better) Translates to: LTAQPQIHAAPC*MLRVFFLCLSR Trigger: TCGACTGAGGCACAAGAAGAAAACCCGCAGCATTCAGCAGGGAGCCGCATGGATCTGAGGCTGTGCAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | GTTCAGGAGGGAAGCTGCCCGGCACGCCTTCTTCCATaGTTGGAACCGACTCAGAACCTCTGTTCACAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VQEGSCPARLLP*LEPTQNLCSQV Trigger: TACCTGTGAACAGAGGTTCTGAGTCGGTTCCAAGCATGGAAGAAGGCGTGCCGGGCAGCTTCCCTCCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | GCCACAAGTCTCCGTGACACTAACAGTGGTCACACTTaGAAGTCCGCCTCTGAGAGTGCTCCTTGCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: ATSLRDTNSGHT*KSASESAPCPL Trigger: CAGTGGGCAAGGAGCACTCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | AGGCTGGGCTGGAGAATGAGGACGTCATCATCGAAGTaGACGGGGAGAACGTGCAAGAGGAACCCTACGACA | + |
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Preference number: 3 (lower is better) Translates to: RLGWRMRTSSSK*TGRTCKRNPTT Trigger: TGTCGTAGGGTTCCTCTTGCACGTTCTCCCCGTTCACTTCGATGATGACGTCCTCATTCTCCAGCCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | GAAGTGACTCCAGTATCTCAGGAGGAAGTAGGCGTGTaGCTGAGGCAGAACAGAACTCGCAGCTCTGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: EVTPVSQEEVGV*LRQNRTRSSAC Trigger: ACAGGCAGAGCTGCGAGTTCTGTTCTGCCTCAGGCACACGCCTACTTCCTCCTGAGATACTGGAGTCACTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | CAGTTAACAAGTGTTGAGGCTGTTCAGGAGGGAAGCTaGCCGGCACGCCTTCTTCCATGCTTGGAACCGACT | + |
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Preference number: 3 (lower is better) Translates to: QLTSVEAVQEGS*PARLLPCLEPT Trigger: AGTCGGTTCCAAGCATGGAAGAAGGCGTGCCGGGCAGCTTCCCTCCTGAACAGCCTCAACACTTGTTAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | AGACCACCCTGTAGCTTCCAAGTTGGGATCCTAAGATaGGGGCGTGATGCCTTCAGCCCAGCACATGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: RPPCSFQVGILR*GRDAFSPAHVQ Trigger: CTGAACATGTGCTGGGCTGAAGGCATCACGCCCCCATCTTAGGATCCCAACTTGGAAGCTACAGGGTGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CAA 90 bp | TGCAAGAGGAACCCTACGACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCCTTCCTTCTGCAGGCTaGAGCACCTGGGATGATTCA | + |
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Preference number: 3 (lower is better) Translates to: CKRNPTTEWWRESRAAGSLPSAG*STWDDS Trigger: TGAATCATCCCAGGTGCTCAAGCCTGCAGAAGGAAG...GCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTCGTAGGGTTCCTCTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR GCA 72 bp | GCTGAGGCAGAGGGAAAGCCAACCCGAGCCAGCCACTaGTGGATTAGCACGGAACATTCACTCTTCTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: AEAEGKPTRASH*WISTEHSLFSN Trigger: ATTAGAGAAGAGTGAATGTTCCGTGCTAATCCAGCAGTGGCTGGCTCGGGTTGGCTTTCCCTCTGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | CTTCTTAGAAATGTGGCCTCACTGTGGAGCCCAGGCTaGTGTAGAACTTGCAATCCTCTTGTCTTAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LLRNVASLWSPG*CRTCNPLVLAS Trigger: GGAGGCTAAGACAAGAGGATTGCAAGTTCTACACCAGCCTGGGCTCCACAGTGAGGCCACATTTCTAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | GCAGGCTTGAGCACCTGGGATGATTCACTGTCCATGTaGGCGCTGCTAATTAAAGAATCAAGCAGATGCCTG | + |
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Preference number: 3 (lower is better) Translates to: AGLSTWDDSLSM*ALLIKESSRCL Trigger: CAGGCATCTGCTTGATTCTTTAATTAGCAGCGCTCACATGGACAGTGAATCATCCCAGGTGCTCAAGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | TTATCAAAATCATGGAGACCACCGAAGAACCTGACCTaGTTACGCAGGACCAGTTCCTGGCTCTGTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LSKSWRPPKNLT*LRRTSSWLCAP Trigger: TGGAGCACAGAGCCAGGAACTGGTCCTGCGTAATCAGGTCAGGTTCTTCGGTGGTCTCCATGATTTTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CAA 90 bp | GACAGAGTGGTGGAGAGAATCAAGAGCAGCGGGAAGCACGTCACTCTGTTGGTCAACTTTTCACTTCTGTaGATGAGACCTCTTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: DRVVERIKSSGKHVTLLVNFSLL*MRPLPS Trigger: AGAAGGAAGAGGTCTCATCAACAGAAGTGAAAAGTT...GACCAACAGAGTGACGTGCTTCCCGCTGCTCTTGATTCTCTCCACCACTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | TCGCACTCTTCGTCTAACTCTGAAGACACGGAGATGTaGAGAGAACAAATGATGCTTCCTCTTGAGGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SHSSSNSEDTEM*REQMMLPLEGP Trigger: TGGGCCCTCAAGAGGAAGCATCATTTGTTCTCTTCACATCTCCGTGTCTTCAGAGTTAGACGAAGAGTGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | AGTCAAGTGAAGATTCGGATTACATCTAGAGGTGCCTaGCTCTCTGACTTAAGGCATGCCAGCTCTAGATCA | + |
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Preference number: 3 (lower is better) Translates to: SQVKIRITSRGA*LSDLRHASSRS Trigger: TGATCTAGAGCTGGCATGCCTTAAGTCAGAGAGCCAGGCACCTCTAGATGTAATCCGAATCTTCACTTGACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTGCTCTTTCCTGCTGCAGTAAACCCTTGTCTTTTTCCTTTGCACAGACTGGTAAAATCTATCTGTaGCCTATCACCCCTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SLALSCCSKPLSFSFAQTGKIYL*PITPFS Trigger: TGAGAAAGGGGTGATAGGCAACAGATAGATTTTACC...AGTCTGTGCAAAGGAAAAAGACAAGGGTTTACTGCAGCAGGAAAGAGCAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTGCTCTTTCCTGCTGCAGTAAACCCTTGTCTTTTTCCTTTGCACAGACTTTCATGCTTTCTCATTaGCTTCCAGAAGCCCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLALSCCSKPLSFSFAQTFMLSH*LPEAQN Trigger: GTTTTGGGCTTCTGGAAGCAAATGAGAAAGCATGAA...AGTCTGTGCAAAGGAAAAAGACAAGGGTTTACTGCAGCAGGAAAGAGCAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CCA 72 bp | CAAATTTATTGTCTTCTTAGAAATGTGGCCTCACTGTaGAGCCCAGGCTGGTGTAGAACTTGCAATCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QIYCLLRNVASL*SPGWCRTCNPL Trigger: AAGAGGATTGCAAGTTCTACACCAGCCTGGGCTCCACAGTGAGGCCACATTTCTAAGAAGACAATAAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR TCA 72 bp | CCAACCTGCCAGGGTTTTGTGACAAAGGAGGCATTATaGGGACAAATTTATTGTCTTCTTAGAAATGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PTCQGFVTKEAL*GQIYCLLRNVA Trigger: GGCCACATTTCTAAGAAGACAATAAATTTGTCCTCATAATGCCTCCTTTGTCACAAAACCCTGGCAGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| CDS-3UTR GCA 90 bp | CCTCTCCGAGGAATGAGCCCTGCCGACCCCGTCAGACCTCCTCTGGACCATCTGAGCAGGCGCTGTTTGTaGAACAGCTGGATGTTACTC | + |
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Preference number: 4 (lower is better) Translates to: PLRGMSPADPVRPPLDHLSRRCL*NSWMLL Trigger: GAGTAACATCCAGCTGTTGCACAAACAGCGCCTGCT...CAGATGGTCCAGAGGAGGTCTGACGGGGTCGGCAGGGCTCATTCCTCGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| CDS-3UTR TCA 90 bp | CCACAAGTCTCCGTGACACTAACAGTGGTCACACTTGGAAGTCCGCCTCTGAGATCTCGATGCCTCTGGTaGCAGGGTCAGTTTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PQVSVTLTVVTLGSPPLRSRCLW*QGQFSQ Trigger: TTGGGAAAACTGACCCTGTCACCAGAGGCATCGAGA...TCTCAGAGGCGGACTTCCAAGTGTGACCACTGTTAGTGTCACGGAGACTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| CDS-3UTR GCA 90 bp | AGCCTTGCTCTTTCCTGCTGCAGTAAACCCTTGTCTTTTTCCTTTGCACAGACTATGGACAAGATCCCGTaGTTTGGGCTGAGTATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLALSCCSKPLSFSFAQTMDKIP*FGLSMG Trigger: CCCCATACTCAGCCCAAAGCACGGGATCTTGTCCAT...AGTCTGTGCAAAGGAAAAAGACAAGGGTTTACTGCAGCAGGAAAGAGCAAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| CDS-3UTR GCA 90 bp | GCCCAAAACATGCAAAATACACACTGTGGTCTTAGTAATAAAGGGAGGCTTCCAGGTACTCCGGGGGCATaGTCATTCGGATCAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: AQNMQNTHCGLSNKGRLPGTPGA*SFGSAV Trigger: TACTGCTGATCCGAATGAGCATGCCCCCGGAGTACC...TGGAAGCCTCCCTTTATTACTAAGACCACAGTGTGTATTTTGCATGTTTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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| 3UTR CAA 72 bp | GATTTCCGACTTATAAAACATGGACAATGTGTACAGTaGTTTTCAGAAGTGTTTAAACTGTGCCTGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: DFRLIKHGQCVQ*FSEVFKLCLAH Trigger: GTGAGCCAGGCACAGTTTAAACACTTCTGAAAACAACTGTACACATTGTCCATGTTTTATAAGTCGGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029738.14 |
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