Pregenerated sensors for GPR88 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068696Ensembl transcript IDs: ENSMUST00000090473.7
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATCACCCTGACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATaGGAGTTTTCTCATAAGCCAGGTCAAGACAAGAACTCTAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: YHPDHWFHLGDKVPK*EFSHKPGQDKNSRE Trigger: CTCCCTAGAGTTCTTGTCTTGACCTGGCTTATGAGAAAACTCCCATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTCAGGGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR TCA 90 bp | GTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACACAGTTAATTaGGGCTATTTGGCCCCAGATTTTATGTGGATAACAGACTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: VQQSKLSLLLNYTVN*GYLAPDFMWITDWS Trigger: AGACCAGTCTGTTATCCACATAAAATCTGGGGCCAAATAGCCTCAATTAACTGTGTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR GCA 90 bp | GAGTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTaGAATCACACTCAGAGGCAAATAAATCAGTTACAAATGTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: ESFPLATIIVQNVQS*NHTQRQINQLQMWV Trigger: TACCCACATTTGTAACTGATTTATTTGCCTCTGAGTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR GCA 90 bp | GAGAACAGAGTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTaGCTGATTCCATCTTCAACAGACATGATACTAATAATAAATGTT | + |
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Preference number: 1 (lower is better) Translates to: ENRVPFEIFSFCITV*LIPSSTDMILIINV Trigger: AACATTTATTATTAGTATCATGTCTGTTGAAGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGACTCTGTTCTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR TCA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAACAAGTCCTTGCAGTCTaGGTGTCTGGATGGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKQVLAV*VSGWTH Trigger: GTGGGTCCATCCAGACACTCAGACTGCAAGGACTTG...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | ACCATTCTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACTGCAGTCTGAGTGTCTaGATGGACCCACGGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TILGPRVQQSKLSLLLNYCSLSV*MDPRVS Trigger: AGACACCCGTGGGTCCATCCAGACACTCAGACTGCA...GTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAGAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGAGTTTTCTCATAAGCCAGGTCAAGACAAGAACTCTAGGGAGCCACGGCGGTGTACACACCTGTaGTTTCACTCTTCCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: KWEFSHKPGQDKNSREPRRCTHL*FHSSRS Trigger: TGACCTGGAAGAGTGAAACCACAGGTGTGTACACCG...CCGTGGCTCCCTAGAGTTCTTGTCTTGACCTGGCTTATGAGAAAACTCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR GCA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAAATTCCCTTTGGCTCATaGACACACACACTCAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKIPFGS*THTLKA Trigger: CGCCTTGAGTGTGTGTGTGCATGAGCCAAAGGGAAT...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | CGGTATTCCCTTTGGCTCATGCACACACACACTCAAGGCGCTTCGTATATAAGAGTTCTGGTATTGCACTaGGGAGGAAGGCAAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: RYSLWLMHTHTQGASYIRVLVLH*GGRQNV Trigger: AACATTTTGCCTTCCTCCCCAGTGCAATACCAGAAC...TCTTATATACGAAGCGCCTTGAGTGTGTGTGTGCATGAGCCAAAGGGAATACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR GCA 90 bp | GTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCAATCACACAAAAGAAGGAGGCAGTaGGGCAGGTGGCTTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VIPLSNHYSTECSKLQSHKRRRQ*GRWLRK Trigger: CTTCCTAAGCCACCTGCCGCACTGCCTCCTTCTTTT...GTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAACAACGGTATTCCCTTTaGCTCATGCACACACACACT | + |
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Preference number: 2 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKQRYSL*LMHTHT Trigger: AGTGTGTGTGTGCATGAGCCAAAGGGAATACCGTTG...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CAA 90 bp | TTAGGATACTATCTACACACAGTCTCTTCATCAACGGTATTCCCTTaGGCTCATGCACACACACACTCAAGGCGCTTCGTATATAAGACG | + |
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Preference number: 2 (lower is better) Translates to: LGYYLHTVSSSTVFP*AHAHTHSRRFVYKT Trigger: CGTCTTATATACGAAGCGCCTTGAGTGTGTGTGTGCATGAGCCAAAGGGAATACCGTTGATGAAGAGACTGTGTGTAGATAGTATCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGAGTTTTCTCATAAGCCAGGTCAAGACAAGAACTCTAGGGAGCCACGGAGCAAGAAGTGTGCATaGTTCAGAATATGTGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: KWEFSHKPGQDKNSREPRSKKCA*FRICES Trigger: ACTTTCACATATTCTGAAGCATGCACACTTCTTGCT...CCGTGGCTCCCTAGAGTTCTTGTCTTGACCTGGCTTATGAGAAAACTCCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACACAGTTGGTTTGTTTCCTCACTaGCTGAGAGTCAATCTCATT | + |
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Preference number: 2 (lower is better) Translates to: LGPRVQQSKLSLLLNYTVGLFPH*LRVNLI Trigger: AATGAGATTGACTCTCAGCCAGTGAGGAAACAAACC...AACTGTGTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAATTTTATCACCCTGACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATTTTAGGGGAAGACCTTaGTTCTGGTATTGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: LNFITLTIGFIWEIKSPNFRGRP*FWYCTG Trigger: CCCAGTGCAATACCAGAACCAAGGTCTTCCCCTAAA...ATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTCAGGGTGATAAAATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTGCCTGATTCCATCTTCTAGGAGCATGCAATaGCAGCTAACATTAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: RVPFEIFSFCITVCLIPSSRSMQ*QLTLAM Trigger: CATAGCTAATGTTAGCTGCCATTGCATGCTCCTAGA...AGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACACAGTTACCATTGGTTTCATTTaGGAGATAAAGTCCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LGPRVQQSKLSLLLNYTVTIGFI*EIKSPN Trigger: ATTTGGGGACTTTATCTCCCAAATGAAACCAATGGT...AACTGTGTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | ACCATTCTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACTATCACCCTGACCATTaGTTTCATTTGGGAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: TILGPRVQQSKLSLLLNYYHPDH*FHLGDK Trigger: TTTATCTCCCAAATGAAACCAATGGTCAGGGTGATA...GTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAGAATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAATTTTATCACCCTGACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATTGTTTCCTCACTGGCTaGGAGTCAATCTCATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LNFITLTIGFIWEIKSPNCFLTG*ESISFQ Trigger: TTGAAATGAGATTGACTCTCAGCCAGTGAGGAAACA...ATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTCAGGGTGATAAAATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR TCA 90 bp | GTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCAATCACACTCCATTTCTGGTTTCTaGCCAATCCAAAACTTGACA | + |
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Preference number: 2 (lower is better) Translates to: VIPLSNHYSTECSKLQSHSISGF*PIQNLT Trigger: TGTCAAGTTTTGGATTGGTCAGAAACCAGAAATGGA...GTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CCA 90 bp | ACTACAGGAGTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGAATCAGTTACAAATGTaGGTAGCAAGAAGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TTGVIPLSNHYSTECSKLNQLQM*VARSVH Trigger: ATGCACACTTCTTGCTACCCACATTTGTAACTGATT...CAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGACTCCTGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CAA 90 bp | AACAGAAGAAATCTTCGTAAGAGAAAAATGACACATGCACACAGTTaGGTTAATGACATGACTGCCAACGTATTGTTAGTGACAAACATA | + |
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Preference number: 2 (lower is better) Translates to: NRRNLRKRKMTHAHS*VNDMTANVLLVTNI Trigger: TATGTTTGTCACTAACAATACGTTGGCAGTCATGTCATTAACCAAACTGTGTGCATGTGTCATTTTTCTCTTACGAAGATTTCTTCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CAA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAAACCTTGGTTCTGGTATaGCACTGGGGAGGAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKTLVLV*HWGGRQ Trigger: TTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGT...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CCA 72 bp | AAATGCCAGTTTACAAGTCCTTGCAGTCTGAGTGTCTaGATGGACCCACGGGTGTCTTTAAAACACAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: KCQFTSPCSLSV*MDPRVSLKHRN Trigger: GTTTCTGTGTTTTAAAGACACCCGTGGGTCCATCCAGACACTCAGACTGCAAGGACTTGTAAACTGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCATTTGGGAGATAAAGTCCCCAAATGGGAGTTTTCTCATAAGCCAGGTCCTAATGGGTATTGCTTaGTGTACCACATGCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: GFIWEIKSPNGSFLISQVLMGIA*CTTCPV Trigger: TACTGGGCATGTGGTACACAAAGCAATACCCATTAG...GACCTGGCTTATGAGAAAACTCCCATTTGGGGACTTTATCTCCCAAATGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CCA 72 bp | GACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATaGGAGTTTTCTCATAAGCCAGGTCAAGACAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: DHWFHLGDKVPK*EFSHKPGQDKN Trigger: GTTCTTGTCTTGACCTGGCTTATGAGAAAACTCCCATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR GCA 72 bp | GTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTaGCTGATTCCATCTTCAACAGACATGATACTAATA | + |
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Preference number: 3 (lower is better) Translates to: VPFEIFSFCITV*LIPSSTDMILI Trigger: TATTAGTATCATGTCTGTTGAAGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CCA 72 bp | ATCAAAGATGAAGACTGCAAACCTCAACTGATACATTaGAGAACAGAGTCCCATTCGAAATATTCTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: IKDEDCKPQLIH*RTESHSKYSPS Trigger: AGAAGGAGAATATTTCGAATGGGACTCTGTTCTCCAATGTATCAGTTGAGGTTTGCAGTCTTCATCTTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR GCA 72 bp | AAATCAGTTACAAATGTGGGTAGCAAGAAGTGTGCATaGTTCAGAATATGTGAAAGTGCTACCCAAAATAGA | + |
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Preference number: 3 (lower is better) Translates to: KSVTNVGSKKCA*FRICESATQNR Trigger: TCTATTTTGGGTAGCACTTTCACATATTCTGAAGCATGCACACTTCTTGCTACCCACATTTGTAACTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR GCA 72 bp | CCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTaGAATCACACTCAGAGGCAAATAAATCAGTTACAA | + |
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Preference number: 3 (lower is better) Translates to: PLATIIVQNVQS*NHTQRQINQLQ Trigger: TTGTAACTGATTTATTTGCCTCTGAGTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR TCA 72 bp | TTTAGGAAATCAAAGATGAAGACTGCAAACCTCAACTaGTACATTGGAGAACAGAGTCCCATTCGAAATATT | + |
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Preference number: 3 (lower is better) Translates to: FRKSKMKTANLN*YIGEQSPIRNI Trigger: AATATTTCGAATGGGACTCTGTTCTCCAATGTATCAGTTGAGGTTTGCAGTCTTCATCTTTGATTTCCTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | AAATGCCAGTTTACAAGTCCTTGCAGTCTGAGTGTCTGGATGGACCCACGGGTGGTTGCGCCTGGGACATaGCTGGCACCGCGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KCQFTSPCSLSVWMDPRVVAPGT*LAPRWR Trigger: CCGCCACCGCGGTGCCAGCCATGTCCCAGGCGCAAC...CACCCGTGGGTCCATCCAGACACTCAGACTGCAAGGACTTGTAAACTGGCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | GGGAAGACCTTGGTTCTGGTATTGCACTGGGGAGGAAGGCAAAATGTTCTCCACGGAGCAGGCGGTAGCTaGCTCCGCCACCGTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GKTLVLVLHWGGRQNVLHGAGGS*LRHRPS Trigger: ACTGGGACGGTGGCGGAGGCAGCTACCGCCTGCTCC...GTGGAGAACATTTTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGTCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | GGGAAGACCTTGGTTCTGGTATTGCACTGGGGAGGAAGGCAAAATGTTCTCCACGAGCGCCCAGGACAGTaGCAGCATGCCCACCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GKTLVLVLHWGGRQNVLHERPGQ*QHAHRV Trigger: CACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTC...GTGGAGAACATTTTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGTCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR TCA 90 bp | GGTTTCATTTGGGAGATAAAGTCCCCAAATGGGAGTTTTCTCATAAGCCAGGTCTGTAGAGCAGCGGGTTaGGCGCCGACAGGGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GFIWEIKSPNGSFLISQVCRAAG*APTGRS Trigger: GCTGCGCCCTGTCGGCGCTCAACCCGCTGCTCTACA...GACCTGGCTTATGAGAAAACTCCCATTTGGGGACTTTATCTCCCAAATGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | GGGAAGACCTTGGTTCTGGTATTGCACTGGGGAGGAAGGCAAAATGTTCTCCACCAGATCGCACGGATCTaGGGAACTCCTCGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GKTLVLVLHWGGRQNVLHQIARI*GTPRSS Trigger: GGAGGAACGAGGAGTTCCGCAGATCCGTGCGATCTG...GTGGAGAACATTTTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGTCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | AAATGCCAGTTTACAAGTCCTTGCAGTCTGAGTGTCTGGATGGACCCACGGGTGAGCGCCACGAGGCAATaGGACAGAAGGGACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: KCQFTSPCSLSVWMDPRVSATRQ*DRRDTV Trigger: CACTGTGTCCCTTCTGTCCCATTGCCTCGTGGCGCT...CACCCGTGGGTCCATCCAGACACTCAGACTGCAAGGACTTGTAAACTGGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | AAATGCCAGTTTACAAGTCCTTGCAGTCTGAGTGTCTGGATGGACCCACGGGTGAGCTGGTGCAGCAGGTaGAAGTTGAGCACGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: KCQFTSPCSLSVWMDPRVSWCSR*KLSTLT Trigger: GGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCT...CACCCGTGGGTCCATCCAGACACTCAGACTGCAAGGACTTGTAAACTGGCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR TCA 90 bp | AGAGTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTGCCTGATTCCATCTAGAGGGCGCAGACGCTaGGATCCGCGGCGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RVPFEIFSFCITVCLIPSRGRRR*DPRRSH Trigger: ATGGCTGCGCCGCGGATCTCAGCGTCTGCGCCCTCT...AGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | ACCATTCTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACACACCAGCGGCTGCGTaGCCAGCAGGAAGACGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TILGPRVQQSKLSLLLNYTPAAA*PAGRRS Trigger: GCTGCGTCTTCCTGCTGGCCACGCAGCCGCTGGTGT...GTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAGAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | CTTGGTCCAAGAGTGCAACAAAGCAAGCTGTCTTTGCTCCTGAATTACACAGTTGTACCCAGTTGCGCCTaGGACATGGCTGGCACCGCG | + |
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Preference number: 4 (lower is better) Translates to: LGPRVQQSKLSLLLNYTVVPSCA*DMAGTA Trigger: CGCGGTGCCAGCCATGTCCCAGGCGCAACTGGGTAC...AACTGTGTAATTCAGGAGCAAAGACAGCTTGCTTTGTTGCACTCTTGGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | CGGTATTCCCTTTGGCTCATGCACACACACACTCAAGGCGCTTCGTATATAAGAGCGTTGCTGGTGGTCTaGAGCTTTCGGAAGGACGAC | + |
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Preference number: 4 (lower is better) Translates to: RYSLWLMHTHTQGASYIRALLVV*SFRKDD Trigger: GTCGTCCTTCCGAAAGCTGCAGACCACCAGCAACGC...TCTTATATACGAAGCGCCTTGAGTGTGTGTGTGCATGAGCCAAAGGGAATACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | ACTACAGGAGTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCCAGCGTGCCCCCGATaGCCAGGCCCGAGTACAGGA | + |
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Preference number: 4 (lower is better) Translates to: TTGVIPLSNHYSTECSKLPACPR*PGPSTG Trigger: TCCTGTACTCGGGCCTGGCCATCGGGGGCACGCTGG...CAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGACTCCTGTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAAGGAGGGAGAAGCCACTaGCCAGGCTCACCCACACCA | + |
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Preference number: 4 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKGGRSH*PGSPTP Trigger: TGGTGTGGGTGAGCCTGGCCAGTGGCTTCTCCCTCC...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | CTGAATTTTATCACCCTGACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATAGCACAGGAGCCAGCTaGCCGCCTGCACGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LNFITLTIGFIWEIKSPNSTGAS*PPARPR Trigger: CCTGGGGCGTGCAGGCGGCCAGCTGGCTCCTGTGCT...ATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTCAGGGTGATAAAATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | AGAGTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTGCCTGATTCCATCTAGGACAGTGCCAGCATaGCCACCGTGTGGCGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: RVPFEIFSFCITVCLIPSRTVPA*PPCGAV Trigger: AACGGCGCCACACGGTGGGCATGCTGGCACTGTCCT...AGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | ACTACAGGAGTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGACCCACACCAGCGGCTaGGTGGCCAGCAGGAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: TTGVIPLSNHYSTECSKLTHTSG*VASRKT Trigger: CGTCTTCCTGCTGGCCACGCAGCCGCTGGTGTGGGT...CAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGACTCCTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | ACTACAGGAGTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCAGCACCGCCTCCTGTaGCATCCAGAGGGCGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTGVIPLSNHYSTECSKLQHRLL*HPEGAD Trigger: GTCTGCGCCCTCTGGATGCCACAGGAGGCGGTGCTG...CAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGACTCCTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR TCA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAACGCAGCCATTCACGATaGAGGCGTTGCTGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKRSHSR*RRCWWS Trigger: AGACCACCAGCAACGCCTTCATCGTGAATGGCTGCG...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CCA 90 bp | GTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCAATCACACGCGCAGCCGGGTAGCTaGTGCAGCAGGTGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIPLSNHYSTECSKLQSHAQPGS*CSRWKL Trigger: CAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGC...GTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR GCA 90 bp | CTGAATTTTATCACCCTGACCATTGGTTTCATTTGGGAGATAAAGTCCCCAAATGCACGCGGCGCACGATaGCCAGGTAGCAGTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LNFITLTIGFIWEIKSPNARGAR*PGSSAT Trigger: TGTTGCACTGCTACCTGGGCATCGTGCGCCGCGTGC...ATTTGGGGACTTTATCTCCCAAATGAAACCAATGGTCAGGGTGATAAAATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR TCA 90 bp | AGAGTCCCATTCGAAATATTCTCCTTCTGCATAACTGTCTGCCTGATTCCATCTACGACACGAGATAGATaGCCATACCGTTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVPFEIFSFCITVCLIPSTTRDR*PYRWPA Trigger: CGCTGGCCAACGGTATGGTCATCTATCTCGTGTCGT...AGATGGAATCAGGCAGACAGTTATGCAGAAGGAGAATATTTCGAATGGGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| 3UTR CAA 72 bp | TTAACTGGTTCTCTAAAAATGCCAGTTTACAAGTCCTaGCAGTCTGAGTGTCTGGATGGACCCACGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGSLKMPVYKS*QSECLDGPTGV Trigger: GACACCCGTGGGTCCATCCAGACACTCAGACTGCAAGGACTTGTAAACTGGCATTTTTAGAGAACCAGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 90 bp | GCGGCGGGGAAGGCGGCGGCGGCGGCGGCGCAGCCGGGTAGCTGGTaGAGCAGGTGGAAGTTGAGCACGCTGACCCGCTTGACGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AAGKAAAAAAQPGSW*SRWKLSTLTRLTLT Trigger: CGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGCCGCCGCCGCCGCCTTCCCCGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 90 bp | GGGTTGAGCGCCGACAGGGCGCAGCACAGGAGCCAGCTGGCCGCCTaGACGCCCCAGGGCACCGGGAGGGAGAAGCCACTGGCCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSADRAQHRSQLAA*TPQGTGREKPLARL Trigger: GAGCCTGGCCAGTGGCTTCTCCCTCCCGGTGCCCTGGGGCGTGCAGGCGGCCAGCTGGCTCCTGTGCTGCGCCCTGTCGGCGCTCAACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS TCA 90 bp | TGGCCAGCAGGAAGACGCAGCAGAGCAGCAGCACCGACAAGCCGCTaGGACGCCGCTGCGCCCGGCGAGGCTGCAGAGCGGCCGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPAGRRSRAAAPTSR*DAAAPGEAAERPAG Trigger: CCCTGCCGGCCGCTCTGCAGCCTCGCCGGGCGCAGCGGCGTCTCAGCGGCTTGTCGGTGCTGCTGCTCTGCTGCGTCTTCCTGCTGGCCA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CCA 90 bp | AAGCAGCGCTCCCGCCGCCAGGAGCGCGGGGTAGTGGACTTGCGGTaGCTCGGCTCCGGGCTTAGGAGCCCAGGGCGGGAGCAGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQRSRRQERGVVDLR*LGSGLRSPGREQQH Trigger: GTGCTGCTGCTCCCGCCCTGGGCTCCTAAGCCCGGAGCCGAGCCACCGCAAGTCCACTACCCCGCGCTCCTGGCGGCGGGAGCGCTGCTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CCA 90 bp | AAGGCGGCGGCGGCGGCGGCGCAGCCGGGTAGCTGGTGCAGCAGGTaGAAGTTGAGCACGCTGACCCGCTTGACGCTGACGCGCACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KAAAAAAQPGSWCSR*KLSTLTRLTLTRTR Trigger: CCGCGTGCGCGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGCCGCCGCCGCCGCCTT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 90 bp | GGGCGGGAGCAGCAGCACCAGACCCAAGGCGAGCGCCCAGGACAGTaGCAGCATGCCCACCGTGTGGCGCCGTTGGTAGAGCACCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GREQQHQTQGERPGQ*QHAHRVAPLVEHLV Trigger: TACCAGGTGCTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTCGCCTTGGGTCTGGTGCTGCTGCTCCCGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS TCA 90 bp | CGGATCTGCGGAACTCCTCGTTCCTCCACGTGTAGAGCAGCGGGTTaGGCGCCGACAGGGCGCAGCACAGGAGCCAGCTGGCCGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RICGTPRSSTCRAAG*APTGRSTGASWPPA Trigger: TGCAGGCGGCCAGCTGGCTCCTGTGCTGCGCCCTGTCGGCGCTCAACCCGCTGCTCTACACGTGGAGGAACGAGGAGTTCCGCAGATCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 90 bp | GCAGCAGCACCAGACCCAAGGCGAGCGCCCAGGACAGTGCCAGCATaGCCACCGTGTGGCGCCGTTGGTAGAGCACCTGGTAGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPDPRRAPRTVPA*PPCGAVGRAPGRWQ Trigger: CTGCCACCTACCAGGTGCTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTCGCCTTGGGTCTGGTGCTGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | GGGAAGACCTTGGTTCTGGTATTGCACTGGGGAGGAAGGCAAAATGTTCTCCACCACCGTGTGGCGCCGTaGGTAGAGCACCTGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKTLVLVLHWGGRQNVLHHRVAP*VEHLVG Trigger: ACCTACCAGGTGCTCTACCAACGGCGCCACACGGTG...GTGGAGAACATTTTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGTCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | GGTTTCATTTGGGAGATAAAGTCCCCAAATGGGAGTTTTCTCATAAGCCAGGTCCGCGGGGTAGTGGACTaGCGGTGGCTCGGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFIWEIKSPNGSFLISQVRGVVD*RWLGSG Trigger: CCCGGAGCCGAGCCACCGCAAGTCCACTACCCCGCG...GACCTGGCTTATGAGAAAACTCCCATTTGGGGACTTTATCTCCCAAATGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | GGGAAGACCTTGGTTCTGGTATTGCACTGGGGAGGAAGGCAAAATGTTCTCCACTGCAGCAGGTGGAAGTaGAGCACGCTGACCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKTLVLVLHWGGRQNVLHCSRWK*STLTRL Trigger: CAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCA...GTGGAGAACATTTTGCCTTCCTCCCCAGTGCAATACCAGAACCAAGGTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | AACTCACGACGGTGTACACACCTGTGGTTTCACTCTTCCAGGTCAATATACAAACGCCCGGGTACCCAGTaGCGCCTGGGACATGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSRRCTHLWFHSSRSIYKRPGTQ*RLGHGW Trigger: CCAGCCATGTCCCAGGCGCAACTGGGTACCCGGGCG...TTTGTATATTGACCTGGAAGAGTGAAACCACAGGTGTGTACACCGTCGTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | GGTAGCAAGAAGTGTGCATGCTTCAGAATATGTGAAAGTGCTACCCAAAATAGAAGCACGCTGACCCGCTaGACGCTGACGCGCACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSKKCACFRICESATQNRSTLTR*TLTRTR Trigger: CCGCGTGCGCGTCAGCGTCAAGCGGGTCAGCGTGCT...TCTATTTTGGGTAGCACTTTCACATATTCTGAAGCATGCACACTTCTTGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS-3UTR CAA 90 bp | GTCATTCCCCTTAGCAACCATTATAGTACAGAATGTTCAAAGCTGCAATCACACTTCACGATGAAGGCGTaGCTGGTGGTCTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VIPLSNHYSTECSKLQSHFTMKA*LVVCSF Trigger: AAAGCTGCAGACCACCAGCAACGCCTTCATCGTGAA...GTGTGATTGCAGCTTTGAACATTCTGTACTATAATGGTTGCTAAGGGGAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | GCCGACAGGGCGCAGCACAGGAGCCAGCTGGCCGCCTaGACGCCCCAGGGCACCGGGAGGGAGAAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ADRAQHRSQLAA*TPQGTGREKPL Trigger: CAGTGGCTTCTCCCTCCCGGTGCCCTGGGGCGTGCAGGCGGCCAGCTGGCTCCTGTGCTGCGCCCTGTCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CCA 72 bp | TCCCGCCGCCAGGAGCGCGGGGTAGTGGACTTGCGGTaGCTCGGCTCCGGGCTTAGGAGCCCAGGGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRRQERGVVDLR*LGSGLRSPGRE Trigger: CTCCCGCCCTGGGCTCCTAAGCCCGGAGCCGAGCCACCGCAAGTCCACTACCCCGCGCTCCTGGCGGCGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 72 bp | CAGCGCTCCCGCCGCCAGGAGCGCGGGGTAGTGGACTaGCGGTGGCTCGGCTCCGGGCTTAGGAGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRSRRQERGVVD*RWLGSGLRSPG Trigger: CCCTGGGCTCCTAAGCCCGGAGCCGAGCCACCGCAAGTCCACTACCCCGCGCTCCTGGCGGCGGGAGCGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 90 bp | CTGCGCAAGCAGCGCTCCCGCCGCCAGGAGCGCGGGGTAGTGGACTaGCGGTGGCTCGGCTCCGGGCTTAGGAGCCCAGGGCGGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRKQRSRRQERGVVD*RWLGSGLRSPGREQ Trigger: CTGCTCCCGCCCTGGGCTCCTAAGCCCGGAGCCGAGCCACCGCAAGTCCACTACCCCGCGCTCCTGGCGGCGGGAGCGCTGCTTGCGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 90 bp | GCGGCGGCGGCGGCGCAGCCGGGTAGCTGGTGCAGCAGGTGGAAGTaGAGCACGCTGACCCGCTTGACGCTGACGCGCACGCGGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAQPGSWCSRWK*STLTRLTLTRTRRT Trigger: CGTGCGCCGCGTGCGCGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGCCGCCGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | AAGGCGGCGGCGGCGGCGGCGCAGCCGGGTAGCTGGTaGAGCAGGTGGAAGTTGAGCACGCTGACCCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KAAAAAAQPGSW*SRWKLSTLTRL Trigger: CAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGCCGCCGCCGCCGCCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CCA 72 bp | GCGGCGGCGGCGCAGCCGGGTAGCTGGTGCAGCAGGTaGAAGTTGAGCACGCTGACCCGCTTGACGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAQPGSWCSR*KLSTLTRLTLT Trigger: CGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGCCGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 90 bp | GGCGAGCGCCCAGGACAGTGCCAGCATGCCCACCGTGTGGCGCCGTaGGTAGAGCACCTGGTAGGTGGCAGGCGCCCTGGTGATGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GERPGQCQHAHRVAP*VEHLVGGRRPGDEQ Trigger: CTGCTCATCACCAGGGCGCCTGCCACCTACCAGGTGCTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 72 bp | GCGGCGCAGCCGGGTAGCTGGTGCAGCAGGTGGAAGTaGAGCACGCTGACCCGCTTGACGCTGACGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AAQPGSWCSRWK*STLTRLTLTRT Trigger: CGTGCGCGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCAGCTACCCGGCTGCGCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | CCAGACCCAAGGCGAGCGCCCAGGACAGTGCCAGCATaGCCACCGTGTGGCGCCGTTGGTAGAGCACCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PDPRRAPRTVPA*PPCGAVGRAPG Trigger: ACCAGGTGCTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTCGCCTTGGGTCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | CAGCAGCACCAGACCCAAGGCGAGCGCCCAGGACAGTaGCAGCATGCCCACCGTGTGGCGCCGTTGGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQHQTQGERPGQ*QHAHRVAPLVE Trigger: CTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGGGCGCTCGCCTTGGGTCTGGTGCTGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | GAGAAGCCACTGGCCAGGCTCACCCACACCAGCGGCTaGGTGGCCAGCAGGAAGACGCAGCAGAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EKPLARLTHTSG*VASRKTQQSSS Trigger: GCTGCTGCTCTGCTGCGTCTTCCTGCTGGCCACGCAGCCGCTGGTGTGGGTGAGCCTGGCCAGTGGCTTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 72 bp | CCAGGACAGTGCCAGCATGCCCACCGTGTGGCGCCGTaGGTAGAGCACCTGGTAGGTGGCAGGCGCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGQCQHAHRVAP*VEHLVGGRRPG Trigger: ACCAGGGCGCCTGCCACCTACCAGGTGCTCTACCAACGGCGCCACACGGTGGGCATGCTGGCACTGTCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 72 bp | TGGTGCAGCAGGTGGAAGTTGAGCACGCTGACCCGCTaGACGCTGACGCGCACGCGGCGCACGATGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WCSRWKLSTLTR*TLTRTRRTMPR Trigger: CCTGGGCATCGTGCGCCGCGTGCGCGTCAGCGTCAAGCGGGTCAGCGTGCTCAACTTCCACCTGCTGCACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS TCA 72 bp | GGAACTCCTCGTTCCTCCACGTGTAGAGCAGCGGGTTaGGCGCCGACAGGGCGCAGCACAGGAGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTPRSSTCRAAG*APTGRSTGASW Trigger: CCAGCTGGCTCCTGTGCTGCGCCCTGTCGGCGCTCAACCCGCTGCTCTACACGTGGAGGAACGAGGAGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS GCA 72 bp | CGTCCCCGACGCCCGGCAGGACAGATCGCACGGATCTaGGGAACTCCTCGTTCCTCCACGTGTAGAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPRRPAGQIARI*GTPRSSTCRAA Trigger: CGCTGCTCTACACGTGGAGGAACGAGGAGTTCCGCAGATCCGTGCGATCTGTCCTGCCGGGCGTCGGGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS CAA 72 bp | CTGAGATCCGCGGCGCAGCCATTCACGATGAAGGCGTaGCTGGTGGTCTGCAGCTTTCGGAAGGACGACACG | + |
|
Preference number: 6 (lower is better) Translates to: LRSAAQPFTMKA*LVVCSFRKDDT Trigger: CGTGTCGTCCTTCCGAAAGCTGCAGACCACCAGCAACGCCTTCATCGTGAATGGCTGCGCCGCGGATCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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| CDS TCA 72 bp | TGGTCTGCAGCTTTCGGAAGGACGACACGAGATAGATaGCCATACCGTTGGCCAGCGTGCCCCCGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSAAFGRTTRDR*PYRWPACPRWP Trigger: TGGCCATCGGGGGCACGCTGGCCAACGGTATGGTCATCTATCTCGTGTCGTCCTTCCGAAAGCTGCAGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090473.7 |
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