Pregenerated sensors for GPR87 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051431Ensembl transcript IDs: ENSMUST00000056898.5, ENSMUST00000200095.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTCCACGACCACGCGGATaGTCTGGTTGTGCTTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: IYTLLHTDSNRKGSLASSPRPRG*SGCAFA Trigger: AGCGAAAGCACAACCAGAGCATCCGCGTGGTCGTGG...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR GCA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTCGGATGCTCTGGTTGTaGTTTCGCTTCCGGCTCGAT | + |
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Preference number: 4 (lower is better) Translates to: IYTLLHTDSNRKGSLASSRMLWL*FRFRLD Trigger: ATCGAGCCGGAAGCGAAAGCACAACCAGAGCATCCG...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTCGCTTCCGGCTCGATTaGCTTATGAATTGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IYTLLHTDSNRKGSLASSRFRLD*LMNCLL Trigger: CAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCG...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTAGCTGTCCACATAGGTaGCAGCCATATGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPSCPHR*QPYATW Trigger: CCAAGTGGCATATGGCTGTCACCTATGTGGACAGCT...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTGGGATTCTGCACAAGTaGTACGGGAGGAAGCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: FIYTLLHTDSNRKGSLASGILHK*YGRKQV Trigger: TACCTGCTTCCTCCCGTATCACTTGTGCAGAATCCC...AGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR GCA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTGATCCAGGCACACGTTaGACGCAGACAAGAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: IYTLLHTDSNRKGSLASSDPGTR*TQTRKV Trigger: CACTTTTCTTGTCTGCGTGCAACGTGTGCCTGGATC...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | TTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTACTCCCAGCGGACTTTTaGGTTTCATGCAGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: LFTLFYILIPIEKAPWPLLPADF*VSCSHE Trigger: TTCATGACTGCATGAAACTCAAAAGTCCGCTGGGAG...TAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTGGCTCGATTGGCTTATaGATTGCCTGCTGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIYTLLHTDSNRKGSLASGSIGL*IACWIC Trigger: ACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCC...AGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR GCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCATGTCCCTCACTTGTaGTGTTTGCAGTGTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPHVPHL*CLQCDL Trigger: CAAGTCACACTGCAAACAGCACAAGTGAGGGACATG...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | TTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTATGCCTGCTGGATTTGTaGATGTATCTGGAGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFTLFYILIPIEKAPWPLCLLDL*MYLEMA Trigger: AGCCATCTCCAGATACATCCACAAATCCAGCAGGCA...TAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTGAGGATTTTATGTGCTaGTTCATCCAGAAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPEDFMC*FIQKPV Trigger: GACAGGCTTCTGGATGAATCAGCACATAAAATCCTC...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTGTTTTATTCCGAATGTaGAAGAAGATCCACACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPVLFRM*KKIHTA Trigger: GGCCGTGTGGATCTTCTTCCACATTCGGAATAAAAC...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | ACATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCAAAGCACTGGCAGGATaGTGGTGTCAAATTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TFIYTLLHTDSNRKGSLAKALAG*WCQICC Trigger: ACAACAAATTTGACACCATCATCCTGCCAGTGCTTT...GGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTTGCATAGAACAAAACTaGGGTGTATCTGCAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FIYTLLHTDSNRKGSLASCIEQN*GVSAED Trigger: ATCCTCTGCAGATACACCTCAGTTTTGTTCTATGCA...AGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | TTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGGATGTATCTGGAGATaGCTATGTAGCATCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: LFTLFYILIPIEKAPWPLGCIWR*LCSIQS Trigger: TGATTGGATGCTACATAGCCATCTCCAGATACATCC...TAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTGATAAAACTTTGGTaGAGGTTATGCTGTACATGC | + |
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Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPLIKLW*RLCCTC Trigger: GCATGTACAGCATAACCTTCACCAAAGTTTTATCAG...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR GCA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTTGTAGTCATAATAGATaGGCACTTCTGATCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLFTLFYILIPIEKAPWPCSHNR*ALLIFG Trigger: TCCGAAGATCAGAAGTGCGCATCTATTATGACTACA...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | TTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAATTTGTGGATGTATCTaGAGATGGCTATGTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LFTLFYILIPIEKAPWPLICGCI*RWLCSI Trigger: GATGCTACATAGCCATCTCCAGATACATCCACAAAT...TAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR TCA 90 bp | ACATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCAGTTTCATGCAGTCATaGATATTTTCCTTAGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TFIYTLLHTDSNRKGSLASFMQS*IFSLVG Trigger: GCCAACTAAGGAAAATATTCATGACTGCATGAAACT...GGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAATATTTTCCTTAGTTaGCTGCCCATTAGTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: FIYTLLHTDSNRKGSLASNIFLS*LPISQY Trigger: ATACTGACTAATGGGCAGCCAACTAAGGAAAATATT...AGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS CCA 90 bp | ACGACCACGCGGATGCTCTGGTTGTGCTTTCGCTTCCGGCTCGATTaGCTTATGAATTGCCTGCTGGATTTGTGGATGTATCTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: TTTRMLWLCFRFRLD*LMNCLLDLWMYLEM Trigger: CATCTCCAGATACATCCACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAACCAGAGCATCCGCGTGGTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 90 bp | GTTGTGCAGGGTAGAGTTCTTCCCATGTCCCTCACTTGTGCTGTTTaGAGTGTGACTTGCTTGGCTGTACAGCTCATTACCTGCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: VVQGRVLPMSLTCAV*SVTCLAVQLITCKS Trigger: ACTTTTGCAGGTAATGAGCTGTACAGCCAAGCAAGTCACACTGCAAACAGCACAAGTGAGGGACATGGGAAGAACTCTACCCTGCACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056898.5 |
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| CDS GCA 90 bp | GGTGTATCTGCAGAGGATAAACTCGAAGTACCAAGGTCCGAATCCTaGATCACGGACTATTCGGAATGGGAATGTCAGGGTCATGATGAG | + |
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Preference number: 5 (lower is better) Translates to: GVSAEDKLEVPRSES*ITDYSEWECQGHDE Trigger: CTCATCATGACCCTGACATTCCCATTCCGAATAGTCCGTGATGCAGGATTCGGACCTTGGTACTTCGAGTTTATCCTCTGCAGATACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTACGCGGATGCTCTGGTaGTGCTTTCGCTTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: IYTLLHTDSNRKGSLASSTRMLW*CFRFRL Trigger: GAGCCGGAAGCGAAAGCACAACCAGAGCATCCGCGT...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS CCA 90 bp | CTCGAAGTACCAAGGTCCGAATCCTGCATCACGGACTATTCGGAATaGGAATGTCAGGGTCATGATGAGGTCAGCTACCACTATATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LEVPRSESCITDYSE*ECQGHDEVSYHYIF Trigger: AAAAATATAGTGGTAGCTGACCTCATCATGACCCTGACATTCCCATTCCGAATAGTCCGTGATGCAGGATTCGGACCTTGGTACTTCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | TTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTCTCGCTTCCGGCTCGATaGGCTTATGAATTGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FTLFYILIPIEKAPWPLVSLPAR*AYELPA Trigger: AGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGA...GACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS GCA 90 bp | GATCCAGGCACACGTTGCACGCAGACAAGAAAAGTGTCATTTCTTTaGAATAGTAGAGGATTTTATGTGCTGATTCATCCAGAAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: DPGTRCTQTRKVSFL*NSRGFYVLIHPEAC Trigger: ACAGGCTTCTGGATGAATCAGCACATAAAATCCTCTACTATTGCAAAGAAATGACACTTTTCTTGTCTGCGTGCAACGTGTGCCTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | ACATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCGGATCCAGGCACACGTaGCACGCAGACAAGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TFIYTLLHTDSNRKGSLAGSRHT*HADKKS Trigger: ACTTTTCTTGTCTGCGTGCAACGTGTGCCTGGATCC...GGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS TCA 90 bp | ATATGCCACTTGGCTCCCAGCGGACTTTTGAGTTTCATGCAGTCATaGATATTTTCCTTAGTTGGCTGCCCATTAGTCAGTATGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: ICHLAPSGLLSFMQS*IFSLVGCPLVSMMF Trigger: AAACATCATACTGACTAATGGGCAGCCAACTAAGGAAAATATTCATGACTGCATGAAACTCAAAAGTCCGCTGGGAGCCAAGTGGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS TCA 90 bp | CCCAAGAAACACGATAGATGTATACATGTTTGCATAGAACAAAACTaGGGTGTATCTGCAGAGGATAAACTCGAAGTACCAAGGTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: PKKHDRCIHVCIEQN*GVSAEDKLEVPRSE Trigger: TTCGGACCTTGGTACTTCGAGTTTATCCTCTGCAGATACACCTCAGTTTTGTTCTATGCAAACATGTATACATCTATCGTGTTTCTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | ATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTAGTATGATGGTGTCAAATTaGTTGTGCAGGGTAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IYTLLHTDSNRKGSLASSMMVSN*LCRVEF Trigger: GAACTCTACCCTGCACAACAAATTTGACACCATCAT...ACTAGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | ACATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCAATTGCCTGCTGGATTaGTGGATGTATCTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: TFIYTLLHTDSNRKGSLANCLLD*WMYLEM Trigger: CATCTCCAGATACATCCACAAATCCAGCAGGCAATT...GGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | CATTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCGATTGGCTTATGAATaGCCTGCTGGATTTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: HLFTLFYILIPIEKAPWPRLAYE*PAGFVD Trigger: ATCCACAAATCCAGCAGGCAATTCATAAGCCAATCG...AGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTACACTCTTTTACATACTGATTCCAATAGAAAAGGCTCCCTGGCCTCTCAAACTGATAAAACTTaGGTGAAGGTTATGCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FIYTLLHTDSNRKGSLASQTDKT*VKVMLY Trigger: GTACAGCATAACCTTCACCAAAGTTTTATCAGTTTG...AGAGGCCAGGGAGCCTTTTCTATTGGAATCAGTATGTAAAAGAGTGTAAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS TCA 72 bp | CCAGCACGGCCACAAACAAACAGCTGTCCACATAGGTaGCAGCCATATGCCACTTGGCTCCCAGCGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: PARPQTNSCPHR*QPYATWLPADF Trigger: AAAGTCCGCTGGGAGCCAAGTGGCATATGGCTGTCACCTATGTGGACAGCTGTTTGTTTGTGGCCGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 72 bp | AAAAACACAGCCACGACCACGCGGATGCTCTGGTTGTaGTTTCGCTTCCGGCTCGATTGGCTTATGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: KNTATTTRMLWL*FRFRLDWLMNC Trigger: GCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAACCAGAGCATCCGCGTGGTCGTGGCTGTGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CCA 72 bp | CCAAGGTCCGAATCCTGCATCACGGACTATTCGGAATaGGAATGTCAGGGTCATGATGAGGTCAGCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: PRSESCITDYSE*ECQGHDEVSYH Trigger: GTGGTAGCTGACCTCATCATGACCCTGACATTCCCATTCCGAATAGTCCGTGATGCAGGATTCGGACCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CAA 90 bp | CACGACCACGCGGATGCTCTGGTTGTGCTTTCGCTTCCGGCTCGATaGGCTTATGAATTGCCTGCTGGATTTGTGGATGTATCTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: HDHADALVVLSLPAR*AYELPAGFVDVSGD Trigger: ATCTCCAGATACATCCACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAACCAGAGCATCCGCGTGGTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 72 bp | GCAGAGGATAAACTCGAAGTACCAAGGTCCGAATCCTaGATCACGGACTATTCGGAATGGGAATGTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: AEDKLEVPRSES*ITDYSEWECQG Trigger: ACCCTGACATTCCCATTCCGAATAGTCCGTGATGCAGGATTCGGACCTTGGTACTTCGAGTTTATCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CCA 72 bp | CGGATGCTCTGGTTGTGCTTTCGCTTCCGGCTCGATTaGCTTATGAATTGCCTGCTGGATTTGTGGATGTAT | + |
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Preference number: 6 (lower is better) Translates to: RMLWLCFRFRLD*LMNCLLDLWMY Trigger: ATACATCCACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAACCAGAGCATCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CAA 90 bp | GATGCTCTGGTTGTGCTTTCGCTTCCGGCTCGATTGGCTTATGAATaGCCTGCTGGATTTGTGGATGTATCTGGAGATGGCTATGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: DALVVLSLPARLAYE*PAGFVDVSGDGYVA Trigger: TGCTACATAGCCATCTCCAGATACATCCACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAACCAGAGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS TCA 72 bp | TGCGCACTTCTGATCTTCGGACGCTTTGCAGCGACCTaGTGCTTTCGCTCCTGGTTCTTATGTTTGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: CALLIFGRFAAT*CFRSWFLCLIS Trigger: AGAAATCAAACATAAGAACCAGGAGCGAAAGCATCAGGTCGCTGCAAAGCGTCCGAAGATCAGAAGTGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 72 bp | TTGTGCTTTCGCTTCCGGCTCGATTGGCTTATGAATTaGCTGCTGGATTTGTGGATGTATCTGGAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: LCFRFRLDWLMN*LLDLWMYLEMA Trigger: AGCCATCTCCAGATACATCCACAAATCCAGCAGGCAATTCATAAGCCAATCGAGCCGGAAGCGAAAGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS TCA 72 bp | TTCTTCCCATGTCCCTCACTTGTGCTGTTTGCAGTGTaGCTTGCTTGGCTGTACAGCTCATTACCTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: FFPCPSLVLFAV*LAWLYSSLPAK Trigger: TTTTGCAGGTAATGAGCTGTACAGCCAAGCAAGTCACACTGCAAACAGCACAAGTGAGGGACATGGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056898.5 |
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| CDS TCA 72 bp | TTCTTCCCATGTCCCTCACTTGTGCTGTTTGCAGTGTaGCTTGCTTGGCTGTACAGCTCATTACCTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: FFPCPSLVLFAV*LAWLYSSLPGN Trigger: ATTACCAGGTAATGAGCTGTACAGCCAAGCAAGTCACACTGCAAACAGCACAAGTGAGGGACATGGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200095.2 |
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| CDS TCA 72 bp | TTACACATCAGTGTAGTCATAATAGATGCGCACTTCTaGTCTTCGGACGCTTTGCAGCGACCTGATGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LHISVVIIDAHF*SSDALQRPDAF Trigger: GAAAGCATCAGGTCGCTGCAAAGCGTCCGAAGATCAGAAGTGCGCATCTATTATGACTACACTGATGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS TCA 72 bp | TTGGCTCCCAGCGGACTTTTGAGTTTCATGCAGTCATaGATATTTTCCTTAGTTGGCTGCCCATTAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LAPSGLLSFMQS*IFSLVGCPLVS Trigger: ACTGACTAATGGGCAGCCAACTAAGGAAAATATTCATGACTGCATGAAACTCAAAAGTCCGCTGGGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 72 bp | TGCAGTGTGACTTGCTTGGCTGTACAGCTCATTACCTaGAAAAGTAGAAACATTCACATTAGGGACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CSVTCLAVQLIT*KSRNIHIRDSH Trigger: ATGGCTGTCCCTAATGTGAATGTTTCTACTTTTGCAGGTAATGAGCTGTACAGCCAAGCAAGTCACACTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056898.5 |
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| CDS CCA 72 bp | TTCCTTAGTTGGCTGCCCATTAGTCAGTATGATGTTTaGCAAGGACAGAATAGCCATGATCACCCAAACACA | + |
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Preference number: 6 (lower is better) Translates to: FLSWLPISQYDV*QGQNSHDHPNT Trigger: TGTGTTTGGGTGATCATGGCTATTCTGTCCTTGCCAAACATCATACTGACTAATGGGCAGCCAACTAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CAA 90 bp | AAGGACAGAATAGCCATGATCACCCAAACACAAACTGATAAAACTTaGGTGAAGGTTATGCTGTACATGCGAGAGTCACCAAAGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: KDRIAMITQTQTDKT*VKVMLYMRESPKGF Trigger: AAAGCCCTTTGGTGACTCTCGCATGTACAGCATAACCTTCACCAAAGTTTTATCAGTTTGTGTTTGGGTGATCATGGCTATTCTGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS CAA 72 bp | ATAGCCATGATCACCCAAACACAAACTGATAAAACTTaGGTGAAGGTTATGCTGTACATGCGAGAGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: IAMITQTQTDKT*VKVMLYMRESP Trigger: TGGTGACTCTCGCATGTACAGCATAACCTTCACCAAAGTTTTATCAGTTTGTGTTTGGGTGATCATGGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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| CDS GCA 72 bp | ACACGTTGCACGCAGACAAGAAAAGTGTCATTTCTTTaGAATAGTAGAGGATTTTATGTGCTGATTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: TRCTQTRKVSFL*NSRGFYVLIHP Trigger: TGGATGAATCAGCACATAAAATCCTCTACTATTGCAAAGAAATGACACTTTTCTTGTCTGCGTGCAACGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056898.5 ENSMUST00000200095.2 |
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