Pregenerated sensors for GPR85 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048216Ensembl transcript IDs: ENSMUST00000060442.14, ENSMUST00000115491.2, ENSMUST00000115492.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCATGCACTTCCCGATGAGCAGCCAGGACCAGTTACTGATTCATTaGCTCTTGACTACTGCTCCACTGCTAAAGAAGATGAAGGATACT | + |
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Preference number: 1 (lower is better) Translates to: SMHFPMSSQDQLLIH*LLTTAPLLKKMKDT Trigger: AGTATCCTTCATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCCTGGCTGCTCATCGGGAAGTGCATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR GCA 90 bp | GCGCCCCTGACAGCTGACATACAGTATAAACACATATCAACTGTCTaGTTCTTAGACCCCACTAGAATGGGCAGCACACCTCAGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: APLTADIQYKHISTV*FLDPTRMGSTPQKK Trigger: TTTCTTCTGAGGTGTGCTGCCCATTCTAGTGGGGTCTAAGAAGCAGACAGTTGATATGTGTTTATACTGTATGTCAGCTGTCAGGGGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR CCA 90 bp | ACAATAAATGCTTCACAAGTTATGCCAGATGTCATACGAAGGCTGTaGGCGCCCCTGACAGCTGACATACAGTATAAACACATATCAACT | + |
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Preference number: 1 (lower is better) Translates to: TINASQVMPDVIRRL*APLTADIQYKHIST Trigger: AGTTGATATGTGTTTATACTGTATGTCAGCTGTCAGGGGCGCCCACAGCCTTCGTATGACATCTGGCATAACTTGTGAAGCATTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR TCA 90 bp | CACGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTaGTTCCATTCATGTTGCCTCCCAGAGAGATATCTAGCATTTGTA | + |
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Preference number: 1 (lower is better) Translates to: HVFILHFSNCSSLVS*FHSCCLPERYLAFV Trigger: TACAAATGCTAGATATCTCTCTGGGAGGCAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR CAA 90 bp | TTCCATGCACTTCCCGATGAGCAGCCAGGACCAGTTACTGATTCATaGCCTCTTGACTACTGCTCCACTGCTAAAGAAGATGAAGGATAC | + |
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Preference number: 2 (lower is better) Translates to: FHALPDEQPGPVTDS*PLDYCSTAKEDEGY Trigger: GTATCCTTCATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCCTGGCTGCTCATCGGGAAGTGCATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR GCA 90 bp | AACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCTACAGGCCACAATTaGTTAGCAGAGAGGGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: NLGQWFCPFLITNLRQQSATGHN*LAERVS Trigger: ACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGC...TGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAGCTACAGGCCACAATTaGTTAGCAGAGAGGGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: PFLITNLRQQSAGSLRDLATGHN*LAERVS Trigger: ACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGC...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAATCCTTGTCACTGCTaGTTCCCATCCTTGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PFLITNLRQQSAGSLRDLNPCHC*FPSLVF Trigger: GAAAACCAAGGATGGGAATCAGCAGTGACAAGGATT...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAAGACTGCAGAATGTTaGCCAAATCCTTGTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: PFLITNLRQQSAGSLRDLKTAEC*PNPCHC Trigger: GCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTT...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAAATCCTTGTCACTGCTaGTTCCCATCCTTGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KKLRAVVLSFLNYKPSPANPCHC*FPSLVF Trigger: GAAAACCAAGGATGGGAATCAGCAGTGACAAGGATT...TGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR GCA 90 bp | CATACAATAAATGCTTCACAAGTTATGCCAGATGTCATACGAAGGCTGTGGGCGTATACTGCTTTGGAATaGTCCCCCAAACTTACAAGG | + |
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Preference number: 2 (lower is better) Translates to: HTINASQVMPDVIRRLWAYTALE*SPKLTR Trigger: CCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTATA...CGCCCACAGCCTTCGTATGACATCTGGCATAACTTGTGAAGCATTTATTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCGCTGATTCCCATCCTTaGTTTTCTTCTCCAGACATG | + |
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Preference number: 2 (lower is better) Translates to: QHLALILSTCYFRYLVFTADSHP*FSSPDM Trigger: CATGTCTGGAGAAGAAAACCAAGGATGGGAATCAGC...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAAATAGCTGATTCCCATCCTTaGTTTTCTTCTCCAGACATG | + |
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Preference number: 2 (lower is better) Translates to: LNYKPSPAVSRITPRFKIADSHP*FSSPDM Trigger: CATGTCTGGAGAAGAAAACCAAGGATGGGAATCAGC...TATTTTAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR CAA 90 bp | ACACGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTaGATTCCATTCATGTTGCCTCCCAGAGAGATATCTAGCATTTGT | + |
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Preference number: 2 (lower is better) Translates to: TRVYSAFFELLISGQ*IPFMLPPREISSIC Trigger: ACAAATGCTAGATATCTCTCTGGGAGGCAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR CAA 90 bp | GCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCATGTaGCCTCCCAGAGAGATATCTAGCATTTGTAAAATAGAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: AFFELLISGQLIPFM*PPREISSICKIETN Trigger: GTTTGTTTCTATTTTACAAATGCTAGATATCTCTCTGGGAGGCAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR CCA 90 bp | TATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCATGTTGAGAAACTTAGGGCAGTaGTTCTGTCCTTTCTTAATT | + |
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Preference number: 2 (lower is better) Translates to: YSAFFELLISGQLIPFMLRNLGQ*FCPFLI Trigger: AATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCT...CAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGCTGATACTTAGCACCTaGTACTTTCGTTATCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKLILST*YFRYLV Trigger: CACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAG...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR CCA 72 bp | GCTTCACAAGTTATGCCAGATGTCATACGAAGGCTGTaGGCGCCCCTGACAGCTGACATACAGTATAAACAC | + |
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Preference number: 3 (lower is better) Translates to: ASQVMPDVIRRL*APLTADIQYKH Trigger: GTGTTTATACTGTATGTCAGCTGTCAGGGGCGCCCACAGCCTTCGTATGACATCTGGCATAACTTGTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR CAA 90 bp | GGACCAGTTACTGATTCATTGCCTCTTGACTACTGCTCCACTGCTAAAGAAGATAAAGACTGCAGAATGTaGCCCAAATCCTTGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: GPVTDSLPLDYCSTAKEDKDCRM*PKSLSL Trigger: CAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTT...ATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR GCA 72 bp | ACAGCTGACATACAGTATAAACACATATCAACTGTCTaGTTCTTAGACCCCACTAGAATGGGCAGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: TADIQYKHISTV*FLDPTRMGSTP Trigger: AGGTGTGCTGCCCATTCTAGTGGGGTCTAAGAAGCAGACAGTTGATATGTGTTTATACTGTATGTCAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR TCA 72 bp | ATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTaGTTCCATTCATGTTGCCTCCCAGAGAGATATCTA | + |
|
Preference number: 3 (lower is better) Translates to: ILHFSNCSSLVS*FHSCCLPERYL Trigger: TAGATATCTCTCTGGGAGGCAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| 3UTR-3UTR CAA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTAAAGACTGCAGAATGTaGCCCAAATCCTTGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFKDCRM*PKSLSL Trigger: CAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTT...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR-3UTR CAA 90 bp | CCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAAAGACTGCAGAATGTaGCCCAAATCCTTGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: PIIHGTSFKNYSTVKSPSKDCRM*PKSLSL Trigger: CAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTT...ACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: DMATGHNCLAERVSVSQGAQQGG*CGTPSK Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR TCA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: DMATGHNCLAERVSVSQGKEGLC*NSASAP Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCCAATTGGCAGCTGCCTaGCCGCTAGCTCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QHLALILSTCYFRYLVFTQLAAA*PLAPGP Trigger: TGGCCCTGGAGCTAGCGGCCAGGCAGCTGCCAATTG...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | AAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCACAATTGGCAGCTGCCTaGCCGCTAGCTCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KKLRAVVLSFLNYKPSPAQLAAA*PLAPGP Trigger: TGGCCCTGGAGCTAGCGGCCAGGCAGCTGCCAATTG...TGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLAQQGG*CGTPSK Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR TCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCAAAGAAGGGTTGTGCTaGAACAGCGCCTCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTKEGLC*NSASAP Trigger: GGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTT...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCGCCCAGCAAGGTGGGTaGTGTGGGACCCCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QHLALILSTCYFRYLVFTAQQGG*CGTPSK Trigger: TTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGC...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR TCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGTGCAGACAAAGGGATTaGTTCCTGCTTGGGCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWCRQRD*FLLGRN Trigger: GTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCA...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTCAATTGGCAGCTGCCTaGCCGCTAGCTCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFQLAAA*PLAPGP Trigger: TGGCCCTGGAGCTAGCGGCCAGGCAGCTGCCAATTG...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCGGATTGATTCCTGCTTaGGCGAAACTCATCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: DMATGHNCLAERVSVSQGGLIPA*AKLIQT Trigger: TGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCC...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGGCCTCAGCTCCCTGTTaGAGAAAATGCAGACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWASAPC*RKCRQR Trigger: CCTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGC...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| 3UTR CAA 72 bp | CTTCCCGATGAGCAGCCAGGACCAGTTACTGATTCATaGCCTCTTGACTACTGCTCCACTGCTAAAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LPDEQPGPVTDS*PLDYCSTAKED Trigger: ATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCCTGGCTGCTCATCGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR TCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTATATTCGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLYSHFA*CPARWV Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCGAATA...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR TCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCTGCAGACAAAGGGATTaGTTCCTGCTTGGGCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTCRQRD*FLLGRN Trigger: GTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCA...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCAGAGGCGAGAGATTTTaGAAAATGTTGTCGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: DMATGHNCLAERVSVSQGRGERF*KMLSAA Trigger: TGCAGCCGACAACATTTTGCAAAATCTCTCGCCTCT...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGGGAAGGCAATCACTTTaGAAGTCAGAGTCCCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWGRQSL*KSESRK Trigger: CTTACGGGACTCTGACTTGCAAAGTGATTGCCTTCC...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGGTTCTGACTCACTGCTaGTACAAACTGGACTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWVLTHC*YKLDWL Trigger: AAGCCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAAC...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAGTTCTGACTCACTaGTGCTACAAACTGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTPVLTH*CYKLDW Trigger: CCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAACTGG...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | CGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: RVYSAFFELLISGQLIPFARWVV*DPFQIL Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...GAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGGGATTGATTCCTGCTTaGGCGAAACTCATCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWGLIPA*AKLIQT Trigger: TGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCC...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR TCA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGAACAAATTGCAGATCTaGGGATGTCTGAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QRLQNVAQILVTADSHPWNKLQI*GCLSST Trigger: TGTGCTGCTCAGACATCCTCAGATCTGCAATTTGTT...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATCCAGTTCTGACTCACTaGTGCTACAAACTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GELLQRLQNVAQILVTADPVLTH*CYKLDW Trigger: CCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAACTGG...ATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTACCAGTTCTGACTCACTaGTGCTACAAACTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLPVLTH*CYKLDW Trigger: CCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAACTGG...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | GGACCAGTTACTGATTCATTGCCTCTTGACTACTGCTCCACTGCTAAAGAAGATGTGGTATTCGCATTTTaGCTGATGCCCAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVTDSLPLDYCSTAKEDVVFAF*LMPSKV Trigger: CACCTTGCTGGGCATCAGGCAAAATGCGAATACCAC...ATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAGCATGAAGGCAGTGTaGAAACAGGACAAAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLSMKAV*KQDKTP Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCCTTCATGCT...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFARWVV*DPFQIL Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR TCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCAACAAATTGCAGATCTaGGGATGTCTGAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTNKLQI*GCLSST Trigger: TGTGCTGCTCAGACATCCTCAGATCTGCAATTTGTT...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTATGTTGGAAGGTGCATTaGTCCTCCTCCCTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLCWKVH*SSSLMK Trigger: CTTCATTAGGGAGGAGGATCAATGCACCTTCCAACA...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCTTCCATACAATAAATGCTTCACAAGTTATGCCAGATGTCATACGAAGGTATTCGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAFHTINASQVMPDVIRRYSHFA*CPARWV Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCGAATA...CCTTCGTATGACATCTGGCATAACTTGTGAAGCATTTATTGTATGGAAGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCAAAATGTTGTCGGCTaGATGGCTATAGTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTQNVVG*MAIVRH Trigger: ATGGCGAACTATAGCCATGCAGCCGACAACATTTTG...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATGGAAGGCAATCACTTTaGAAGTCAGAGTCCCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GELLQRLQNVAQILVTADGRQSL*KSESRK Trigger: CTTACGGGACTCTGACTTGCAAAGTGATTGCCTTCC...ATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCGTGGTATTCGCATTTTaGCTGATGCCCAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHLALILSTCYFRYLVFTVVFAF*LMPSKV Trigger: CACCTTGCTGGGCATCAGGCAAAATGCGAATACCAC...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAATAATTCATAGCATGAAGGCAGTGTaGAAACAGGACAAAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLPQTYKACLKWCTPIIHSMKAV*KQDKTP Trigger: GGGGGTTTTGTCCTGTTTCCACACTGCCTTCATGCT...ATGAATTATTGGGGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAATAATTCATGGAAGGCAATCACTTTaGAAGTCAGAGTCCCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLPQTYKACLKWCTPIIHGRQSL*KSESRK Trigger: CTTACGGGACTCTGACTTGCAAAGTGATTGCCTTCC...ATGAATTATTGGGGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCACCCACAGAAAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAACAGAGTCCACACCATaGAGATCACAGCCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: CSPTERNLGQWFCPFLITTESTP*RSQPNT Trigger: CGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGT...TGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTTTCTGTGGGTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGTTCTGACTCACTGCTaGTACAAACTGGACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGELLQRLQNVAQILVTAVLTHC*YKLDWL Trigger: AAGCCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAAC...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTVTWIF*SKEGLC Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCACTGCTGCTACAAACTaGACTGGCTTCATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCFGMLPQTYKACLKWCTTAATN*TGFIFL Trigger: AAGGAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGGCAAGGTGGGTGGTGTaGGACCCCTTCCAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKARWVV*DPFQIL Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGC...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGGATTGATTCCTGCTTaGGCGAAACTCATCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IGELLQRLQNVAQILVTAGLIPA*AKLIQT Trigger: TGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCC...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAATAATTCATAACAAATTGCAGATCTaGGGATGTCTGAGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: MLPQTYKACLKWCTPIIHNKLQI*GCLSST Trigger: TGTGCTGCTCAGACATCCTCAGATCTGCAATTTGTT...ATGAATTATTGGGGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTCAAAATGTTGTCGGCTaGATGGCTATAGTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGELLQRLQNVAQILVTAQNVVG*MAIVRH Trigger: ATGGCGAACTATAGCCATGCAGCCGACAACATTTTG...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | CGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCGTTCTGACTCACTGCTaGTACAAACTGGACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVYSAFFELLISGQLIPFVLTHC*YKLDWL Trigger: AAGCCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAAC...GAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR GCA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTTACTACAGGCCCTCGTaGAAAAACTCTCCAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGELLQRLQNVAQILVTAYYRPS*KNSPIA Trigger: TGCTATTGGAGAGTTTTTGCACGAGGGCCTGTAGTA...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | AACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAGTCAACTGCTGCTACAAACTaGACTGGCTTCATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLGQWFCPFLITNLRQQSTAATN*TGFIFL Trigger: AAGGAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...TGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | TATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCATGTTGGCCTCAGCTCCCTGTTaGAGAAAATGCAGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSAFFELLISGQLIPFMLASAPC*RKCRQR Trigger: CCTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGC...CAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR TCA 90 bp | ATTATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTTGTTGGAAGGTGCATTaGTCCTCCTCCCTAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIGELLQRLQNVAQILVTCWKVH*SSSLMK Trigger: CTTCATTAGGGAGGAGGATCAATGCACCTTCCAACA...AGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTATTCGCATTTTGCCTaGTGCCCAGCAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKYSHFA*CPARWV Trigger: CACCCACCTTGCTGGGCATCAGGCAAAATGCGAATA...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | CTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAAATAAAAGGGATTGATTCCTaGTTGGGCGAAACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNYKPSPAVSRITPRFKIKGIDS*LGETHP Trigger: TGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTT...TATTTTAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCCTTTCACTAGCAAAATaGAGATCAGAAGGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHLALILSTCYFRYLVFTLSLAK*RSEGCP Trigger: TGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAG...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCACTTTCACTAGCAAAATaGAGATCAGAAGGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKLRAVVLSFLNYKPSPALSLAK*RSEGCP Trigger: TGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAG...TGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAATAATTCATACTGCTGCTACAAACTaGACTGGCTTCATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLPQTYKACLKWCTPIIHTAATN*TGFIFL Trigger: AAGGAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGT...ATGAATTATTGGGGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLITNLRQQSAGSLRDLVPLVT*IFCSKE Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR CCA 90 bp | AACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLGQWFCPFLITNLRQQSVPLVT*IFCSKE Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...TGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| 3UTR CAA 72 bp | TATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTaGATTCCATTCATGTTGCCTCCCAGAGAGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: YSAFFELLISGQ*IPFMLPPREIS Trigger: AGATATCTCTCTGGGAGGCAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR TCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTGCAGACAAAGGGATTaGTTCCTGCTTGGGCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKCRQRD*FLLGRN Trigger: GTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCA...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCAAAATGTTGTCGGCTaGATGGCTATAGTTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCLFCIFRTAHLWSVDSIQNVVG*MAIVRH Trigger: ATGGCGAACTATAGCCATGCAGCCGACAACATTTTG...AATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR GCA 90 bp | ATTATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTAGAGGCGAGAGATTTTaGAAAATGTTGTCGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIGELLQRLQNVAQILVTRGERF*KMLSAA Trigger: TGCAGCCGACAACATTTTGCAAAATCTCTCGCCTCT...AGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGACAGAGTCCACACCATaGAGATCACAGCCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKTESTP*RSQPNT Trigger: CGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGT...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGGTGGTATTCGCATTTTaGCTGATGCCCAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKVVFAF*LMPSKV Trigger: CACCTTGCTGGGCATCAGGCAAAATGCGAATACCAC...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
||
| CDS-3UTR GCA 90 bp | TATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCATGTTGTACTACAGGCCCTCGTaGAAAAACTCTCCAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSAFFELLISGQLIPFMLYYRPS*KNSPIA Trigger: TGCTATTGGAGAGTTTTTGCACGAGGGCCTGTAGTA...CAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
||
| CDS-3UTR GCA 90 bp | ATTATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTAAAGGGATTGATTCCTaGTTGGGCGAAACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIGELLQRLQNVAQILVTKGIDS*LGETHP Trigger: TGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTT...AGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | TGTTCACCCACAGAAAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSPTERNLGQWFCPFLITVTWIF*SKEGLC Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...TGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTTTCTGTGGGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | TGTTCACCCACAGAAAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACACTTTCACTAGCAAAATaGAGATCAGAAGGTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CSPTERNLGQWFCPFLITLSLAK*RSEGCP Trigger: TGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAG...TGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTTTCTGTGGGTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGGCCTCAGCTCCCTGTTaGAGAAAATGCAGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKASAPC*RKCRQR Trigger: CCTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGC...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CCA 90 bp | AAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAGTTCCCTTGGTAACCTaGATTTTCTGCAGTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKLRAVVLSFLNYKPSPAVPLVT*IFCSKE Trigger: TTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAAC...TGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | CCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTTACTACAGGCCCTCGTaGAAAAACTCTCCAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PIIHGTSFKNYSTVKSPSYYRPS*KNSPIA Trigger: TGCTATTGGAGAGTTTTTGCACGAGGGCCTGTAGTA...ACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | CCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAAAGGGATTGATTCCTaGTTGGGCGAAACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIIHGTSFKNYSTVKSPSKGIDS*LGETHP Trigger: TGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTT...ACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR GCA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTGTAACCTGGATTTTCTaGAGTAAAGAAGGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFVTWIF*SKEGLC Trigger: GCACAACCCTTCTTTACTGCAGAAAATCCAGGTTAC...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS TCA 90 bp | CCAAGACCAATAGCCGCCTTCTGCCTGTGGTATTCGCATTTTGCCTaGTGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTCCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRPIAAFCLWYSHFA*CPARWVVWDPFQIL Trigger: CAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCGAATACCACAGGCAGAAGGCGGCTATTGGTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS GCA 90 bp | TCATCCAAGACCAATAGCCGCCTTCTGCCTGTGGTATTCGCATTTTaGCTGATGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSKTNSRLLPVVFAF*LMPSKVGGVGPLPN Trigger: ATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCGAATACCACAGGCAGAAGGCGGCTATTGGTCTTGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCATGGAGATCAGAAGGTaGCCCACAACGCTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DMATGHNCLAERVSVSQGMEIRR*PTTLTP Trigger: AGGAGTCAGCGTTGTGGGCAACCTTCTGATCTCCAT...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCATGGAGATCAGAAGGTaGCCCACAACGCTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YCFGMLPQTYKACLKWCTMEIRR*PTTLTP Trigger: AGGAGTCAGCGTTGTGGGCAACCTTCTGATCTCCAT...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: DMATGHNCLAERVSVSQGKRSAS*YRSGDG Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | TACTGCTTTGGAATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCGGGATTGATTCCTGCTaGGGCGAAACTCATCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YCFGMLPQTYKACLKWCTGIDSC*GETHPD Trigger: GTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCC...GGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GACATGGCTACAGGCCACAATTGCTTAGCAGAGAGGGTTAGTGTTTCACAAGGCCACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DMATGHNCLAERVSVSQGHSKVP*VTWIFC Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...GCCTTGTGAAACACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | ATGCTCCCCCAAACTTACAAGGCGTGTTTAAAGTGGTGTACCCCAATAATTCATCCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLPQTYKACLKWCTPIIHPEGAV*EGALIL Trigger: GAGGATCAATGCACCTTCCAACACCGCTCCTTCAGG...ATGAATTATTGGGGTACACCACTTTAAACACGCCTTGTAAGTTTGGGGGAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | AAGAAACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCACCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KKLRAVVLSFLNYKPSPAPEGAV*EGALIL Trigger: GAGGATCAATGCACCTTCCAACACCGCTCCTTCAGG...TGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATTCCCATCCTTGGCACAGTAAGGTTCCCTaGGTAACCTGGATTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLQNVAQILVTADSHPWHSKVP*VTWIFC Trigger: GCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTG...CCAAGGATGGGAATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | CCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTATGTGGTATTCGCATTTaGCCTGATGCCCAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFLITNLRQQSAGSLRDLCGIRI*PDAQQG Trigger: ACCTTGCTGGGCATCAGGCAAAATGCGAATACCACA...TAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGGGATTGATTCCTGCTaGGGCGAAACTCATCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IGELLQRLQNVAQILVTAGIDSC*GETHPD Trigger: GTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCC...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | CAGCATTTAGCACTGATACTTAGCACCTGCTACTTTCGTTATCTAGTGTTCACCCGCCTCAGCTCCCTGTaGGAGAAAATGCAGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QHLALILSTCYFRYLVFTRLSSL*EKMQTK Trigger: CTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGCG...GGTGAACACTAGATAACGAAAGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | TGTGCCTTCCATACAATAAATGCTTCACAAGTTATGCCAGATGTCATACGAAGGATGGAGATCAGAAGGTaGCCCACAACGCTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CAFHTINASQVMPDVIRRMEIRR*PTTLTP Trigger: AGGAGTCAGCGTTGTGGGCAACCTTCTGATCTCCAT...CCTTCGTATGACATCTGGCATAACTTGTGAAGCATTTATTGTATGGAAGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CAA 90 bp | GGACCAGTTACTGATTCATTGCCTCTTGACTACTGCTCCACTGCTAAAGAAGATAAAAGGTCAGCCTCTTaGTATAGAAGCGGTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPVTDSLPLDYCSTAKEDKRSAS*YRSGDG Trigger: CCCATCACCGCTTCTATACAAAGAGGCTGACCTTTT...ATCTTCTTTAGCAGTGGAGCAGTAGTCAAGAGGCAATGAATCAGTAACTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CAA 90 bp | AACTTAGGGCAGTGGTTCTGTCCTTTCTTAATTACAAACCTTCGCCAGCAGTCAGTGTTGGAAGGTGCATaGATCCTCCTCCCTAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLGQWFCPFLITNLRQQSVLEGA*ILLPNE Trigger: TTCATTAGGGAGGAGGATCAATGCACCTTCCAACAC...TGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTGATGTGTTGGAAGGTGCATaGATCCTCCTCCCTAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GELLQRLQNVAQILVTADVLEGA*ILLPNE Trigger: TTCATTAGGGAGGAGGATCAATGCACCTTCCAACAC...ATCAGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTCCTGAAGGAGCGGTGTaGGAAGGTGCATTGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFPEGAV*EGALIL Trigger: GAGGATCAATGCACCTTCCAACACCGCTCCTTCAGG...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | ATAGGTGAACTATTGCAAAGACTGCAGAATGTTGCCCAAATCCTTGTCACTGCTTGTGGTATTCGCATTTaGCCTGATGCCCAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IGELLQRLQNVAQILVTACGIRI*PDAQQG Trigger: ACCTTGCTGGGCATCAGGCAAAATGCGAATACCACA...AGCAGTGACAAGGATTTGGGCAACATTCTGCAGTCTTTGCAATAGTTCACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | CTTAATTACAAACCTTCGCCAGCAGTCAGCAGGATCACTCCGAGATTTAAAATACGCCTCAGCTCCCTGTaGGAGAAAATGCAGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNYKPSPAVSRITPRFKIRLSSL*EKMQTK Trigger: CTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGCG...TATTTTAAATCTCGGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGGTTTTCTTCTCCAGACATGGCTACAGGCCACAATTGCTTAGCAGAGAGCAGGTGGAGCCATTTTaGACAGAGTTGAATACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLVFFSRHGYRPQLLSREQVEPF*TELNTN Trigger: ATTTGTATTCAACTCTGTCAAAAATGGCTCCACCTG...CTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTCTGGAGAAGAAAACCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | TATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCATGTTGGGGATTGATTCCTGCTaGGGCGAAACTCATCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YSAFFELLISGQLIPFMLGIDSC*GETHPD Trigger: GTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCC...CAACATGAATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CAA 90 bp | ACGTGTTTATTCTGCATTTTTCGAACTGCTCATCTCTGGTCAGTTGATTCCATTCGCCTCAGCTCCCTGTaGGAGAAAATGCAGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TCLFCIFRTAHLWSVDSIRLSSL*EKMQTK Trigger: CTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGCG...AATGGAATCAACTGACCAGAGATGAGCAGTTCGAAAAATGCAGAATAAACACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CAA 90 bp | TGTGCCTTCCATACAATAAATGCTTCACAAGTTATGCCAGATGTCATACGAAGGGTGTTGGAAGGTGCATaGATCCTCCTCCCTAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: CAFHTINASQVMPDVIRRVLEGA*ILLPNE Trigger: TTCATTAGGGAGGAGGATCAATGCACCTTCCAACAC...CCTTCGTATGACATCTGGCATAACTTGTGAAGCATTTATTGTATGGAAGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060442.14 |
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| CDS-3UTR CAA 90 bp | TGGTGTACCCCAATAATTCATGGCACATCTTTTAAGAATTACAGTACTGTTAAGTGTGGTATTCGCATTTaGCCTGATGCCCAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WCTPIIHGTSFKNYSTVKCGIRI*PDAQQG Trigger: ACCTTGCTGGGCATCAGGCAAAATGCGAATACCACA...CTTAACAGTACTGTAATTCTTAAAAGATGTGCCATGAATTATTGGGGTACACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS-3UTR CAA 90 bp | GGCACATCTTTTAAGAATTACAGTACTGTTAAGTCCCCCAGTAGTGTAGTCTTTCAGGTGGAGCCATTTTaGACAGAGTTGAATACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTSFKNYSTVKSPSSVVFQVEPF*TELNTN Trigger: ATTTGTATTCAACTCTGTCAAAAATGGCTCCACCTG...AAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAGATGTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS TCA 72 bp | ATAGCCGCCTTCTGCCTGTGGTATTCGCATTTTGCCTaGTGCCCAGCAAGGTGGGTGGTGTGGGACCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IAAFCLWYSHFA*CPARWVVWDPF Trigger: GAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCGAATACCACAGGCAGAAGGCGGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS GCA 72 bp | ACCAATAGCCGCCTTCTGCCTGTGGTATTCGCATTTTaGCTGATGCCCAGCAAGGTGGGTGGTGTGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: TNSRLLPVVFAF*LMPSKVGGVGP Trigger: GGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCGAATACCACAGGCAGAAGGCGGCTATTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS GCA 72 bp | GGAAACAGGACAAAACCCCCAGGAAGGCAATCACTTTaGAAGTCAGAGTCCCGTAAGTCCAGGTGGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GNRTKPPGRQSL*KSESRKSRWSH Trigger: ATGGCTCCACCTGGACTTACGGGACTCTGACTTGCAAAGTGATTGCCTTCCTGGGGGTTTTGTCCTGTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS CAA 72 bp | ATCGTTAGCCCTGAAGGAGCGGTGTTGGAAGGTGCATaGATCCTCCTCCCTAATGAAGGAGTAGGTGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: IVSPEGAVLEGA*ILLPNEGVGAY Trigger: GTAGGCACCTACTCCTTCATTAGGGAGGAGGATCAATGCACCTTCCAACACCGCTCCTTCAGGGCTAACGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS CCA 72 bp | TTGGAGAAAATGCAGACAAAGGGATTGATTCCTGCTTaGGCGAAACTCATCCAGACAGCGGCTGTTAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LEKMQTKGLIPA*AKLIQTAAVRN Trigger: ATTTCTAACAGCCGCTGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCATTTTCTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS CAA 90 bp | CTATGCAAGGTCTTATCTTTCACTAGCAAAATGGAGATCAGAAGGTaGCCCACAACGCTGACTCCTATTATGAAACCCAGGGAAGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LCKVLSFTSKMEIRR*PTTLTPIMKPREVS Trigger: ACTGACTTCCCTGGGTTTCATAATAGGAGTCAGCGTTGTGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAGATAAGACCTTGCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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| CDS CAA 72 bp | GTCTTATCTTTCACTAGCAAAATGGAGATCAGAAGGTaGCCCACAACGCTGACTCCTATTATGAAACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSFTSKMEIRR*PTTLTPIMKPR Trigger: CCTGGGTTTCATAATAGGAGTCAGCGTTGTGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAGATAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060442.14 ENSMUST00000115491.2 ENSMUST00000115492.2 |
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