Pregenerated sensors for GPR68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047415Ensembl transcript IDs: ENSMUST00000053668.10, ENSMUST00000110065.8, ENSMUST00000110066.8
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTaGAAATCTCCTGGAAGTGACGATGCCGACTCCCTCCCATCTGCA | + |
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Preference number: 1 (lower is better) Translates to: RRVLPSSPHPRPAAL*KSPGSDDADSLPSA Trigger: TGCAGATGGGAGGGAGTCGGCATCGTCACTTCCAGGAGATTTGCAAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CCA 90 bp | ATGCCGACTCCCTCCCATCTGCAGCCCAGGCGGCCACCAAGAACATaGGAGGAGACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: MPTPSHLQPRRPPRT*EETGLIHTVSSAQA Trigger: AGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGTCTCCTCCCATGTTCTTGGTGGCCGCCTGGGCTGCAGATGGGAGGGAGTCGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR TCA 90 bp | AGGGGCCAGAGGGACCTGGCTGTGGCCCAAACCATGGTTCCTTCCTaGGGAGAGAGGCACCCGTACATGGTAAAGTGGGAGACAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: RGQRDLAVAQTMVPS*GERHPYMVKWETAT Trigger: GGTGGCTGTCTCCCACTTTACCATGTACGGGTGCCTCTCTCCTCAGGAAGGAACCATGGTTTGGGCCACAGCCAGGTCCCTCTGGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR TCA 90 bp | CCTGTGTCACACAAGACCATAGCACACTTGGGCTGGTATCGTCTGTaGCAACAGGGGCACTGGAAGGCTTGGCAGGTGACCACGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PVSHKTIAHLGWYRL*QQGHWKAWQVTTQG Trigger: ACCCTGCGTGGTCACCTGCCAAGCCTTCCAGTGCCCCTGTTGTCACAGACGATACCAGCCCAAGTGTGCTATGGTCTTGTGTGACACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CCA 90 bp | ACACTTAGACTAGACGGACACAAAAAGCTAATTAGGGCTGGGCAGTaGTGGCGCACGCCTTTAATCCTAACACTTGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TLRLDGHKKLIRAGQ*WRTPLILTLGRQRQ Trigger: CTGCCTCTGCCTCCCAAGTGTTAGGATTAAAGGCGTGCGCCACCACTGCCCAGCCCTAATTAGCTTTTTGTGTCCGTCTAGTCTAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CCA 90 bp | AAATACTGTGGGATGAGGAGGCACAGAACACTTAGCTATCACCATTaGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: KYCGMRRHRTLSYHH*PVRTEAGEGVGLSG Trigger: GCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCAATGGTGATAGCTAAGTGTTCTGTGCCTCCTCATCCCACAGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTACCATGGTTCCTTCCTaGGGAGAGAGGCACCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFTMVPS*GERHPY Trigger: GTACGGGTGCCTCTCTCCTCAGGAAGGAACCATGGT...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CAA 90 bp | ACACTTGGGCTGGTATCGTCTGTGACAACAGGGGCACTGGAAGGCTaGGCAGGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLGLVSSVTTGALEG*AGDHAGSYPPLRTP Trigger: TGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACCTGCCAAGCCTTCCAGTGCCCCTGTTGTCACAGACGATACCAGCCCAAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTAGAGGGACCTGGCTGTaGCCCAAACCATGGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFRGTWL*PKPWFL Trigger: AAGGAACCATGGTTTGGGCCACAGCCAGGTCCCTCT...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTCGGCCACCAAGAACATaGGAGGAGACAGGGCTCATT | + |
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Preference number: 2 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFRPPRT*EETGLI Trigger: AATGAGCCCTGTCTCCTCCCATGTTCTTGGTGGCCG...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCAACCATGGTTCCTTCCTaGGGAGAGAGGCACCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPTMVPS*GERHPY Trigger: GTACGGGTGCCTCTCTCCTCAGGAAGGAACCATGGT...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACATCCGCACCCCAGGCCTaGTGCTCTTTGCAAATCTCC | + |
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Preference number: 2 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTSAPQA*CSLQIS Trigger: GGAGATTTGCAAAGAGCAGCAGGCCTGGGGTGCGGA...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCAAGAGGGACCTGGCTGTaGCCCAAACCATGGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPRGTWL*PKPWFL Trigger: AAGGAACCATGGTTTGGGCCACAGCCAGGTCCCTCT...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACACGGCCACCAAGAACATaGGAGGAGACAGGGCTCATT | + |
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Preference number: 2 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTRPPRT*EETGLI Trigger: AATGAGCCCTGTCTCCTCCCATGTTCTTGGTGGCCG...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCAGGTGTAGGTCTTTCTaGCATGCAGCCATCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIRCRSF*HAAISA Trigger: GGCAGAGATGGCTGCATGCCAGAAAGACCTACACCT...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTACCATGGTTCCTTCCTaGGGAGAGAGGCACCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: SQKLLDALWCMGRRVGITTMVPS*GERHPY Trigger: GTACGGGTGCCTCTCTCCTCAGGAAGGAACCATGGT...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGCCTGGTCTACAGAGTaGGTTCCAAGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SQKLLDALWCMGRRVGITAWSTE*VPRQPG Trigger: CCCTGGCTGTCTTGGAACTCACTCTGTAGACCAGGC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTTCCGCACCCCAGGCCTaGTGCTCTTTGCAAATCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQKLLDALWCMGRRVGITSAPQA*CSLQIS Trigger: GGAGATTTGCAAAGAGCAGCAGGCCTGGGGTGCGGA...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGGGCTGGTATCGTCTGTaGCAACAGGGGCACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMGWYRL*QQGHWK Trigger: CTTCCAGTGCCCCTGTTGTCACAGACGATACCAGCC...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCATCTCCTATACCAAAATaGAGCTTAAGCCAAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPSPIPK*SLSQTC Trigger: ACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGA...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCATTAGTATCAATGTCTTaGCATACAGTTGCCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPLVSMS*HTVAMD Trigger: GTCCATGGCAACTGTATGCCAAGACATTGATACTAA...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAGCCTGGTCTACAGAGTaGGTTCCAAGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LHKPTSQSNTGILGIREKAWSTE*VPRQPG Trigger: CCCTGGCTGTCTTGGAACTCACTCTGTAGACCAGGC...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTGGTTTCTTCCCTGACTaGCTCTCTGCTGTTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: TLCARNLAKDAVLGLSLLGFFPD*LSAVIP Trigger: AGGGATAACAGCAGAGAGGCAGTCAGGGAAGAAACC...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAATCCCTGGGGTTTCTTTaGCATCAGCCCTTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LHKPTSQSNTGILGIREKSLGFL*HQPLGV Trigger: CACCCCCAAGGGCTGATGGCAAAGAAACCCCAGGGA...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CAA 90 bp | CCAAGACAGCCAGGGCTACACAGAGAAACCCTGTGTGCCAGGAACTaGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTATTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PRQPGLHRETLCARN*AKDAVLGLSLLIKL Trigger: AAGCTTAATAAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGCTGGGGTTTCTTCCCTaGCTGCCTCTCTGCTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMLGFLP*LPLCCY Trigger: ATAACAGCAGAGAGGCAGTCAGGGAAGAAACCCCAG...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGGTTTCTTCCCTGACTaGCTCTCTGCTGTTATCCCT | + |
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Preference number: 2 (lower is better) Translates to: SQKLLDALWCMGRRVGITGFFPD*LSAVIP Trigger: AGGGATAACAGCAGAGAGGCAGTCAGGGAAGAAACC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGCTGGATGCTCTATGGTaGATGGGGAGAAGGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMLDALW*MGRRVG Trigger: TCCTACCCTTCTCCCCATGCACCATAGAGCATCCAG...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAAGAGGGACCTGGCTGTaGCCCAAACCATGGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LWCMGRRVGITDNRYMILRGTWL*PKPWFL Trigger: AAGGAACCATGGTTTGGGCCACAGCCAGGTCCCTCT...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGATAAGTTCTGTAAAGTaGGACGTGCCTGATGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMISSVK*DVPDAG Trigger: CCCAGCATCAGGCACGTCTCACTTTACAGAACTTAT...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR GCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAAGGCCTGCTGCTCTTTaGAAATCTCCTGGAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LWCMGRRVGITDNRYMILRPAAL*KSPGSD Trigger: GTCACTTCCAGGAGATTTGCAAAGAGCAGCAGGCCT...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTATTTAATCCTAACACTTaGGAGGCAGAGGCAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: LWCMGRRVGITDNRYMILFNPNT*EAEAGG Trigger: TCCGCCTGCCTCTGCCTCCCAAGTGTTAGGATTAAA...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CAA 90 bp | AATACAAAAATACAGCACTCCTTAGTAAGGGGAGCTGGGCTTAGCTaGCTCCAGTCCAAGCCAGTGAGAATCCAGAATTTCAGGTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: NTKIQHSLVRGAGLS*LQSKPVRIQNFRSN Trigger: GTTTGACCTGAAATTCTGGATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGAGTGCTGTATTTTTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR TCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAATAAGTTCTGTAAAGTaGGACGTGCCTGATGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LHKPTSQSNTGILGIREKISSVK*DVPDAG Trigger: CCCAGCATCAGGCACGTCTCACTTTACAGAACTTAT...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CCA 72 bp | AGGACACGGAGCAGGTTTCCAGGGGCCAGAGGGACCTaGCTGTGGCCCAAACCATGGTTCCTTCCTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RTRSRFPGARGT*LWPKPWFLPEE Trigger: CTCCTCAGGAAGGAACCATGGTTTGGGCCACAGCCAGGTCCCTCTGGCCCCTGGAAACCTGCTCCGTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR GCA 72 bp | CTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTaGAAATCTCCTGGAAGTGACGATGCCGACTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LPSSPHPRPAAL*KSPGSDDADSL Trigger: GAGGGAGTCGGCATCGTCACTTCCAGGAGATTTGCAAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCGGGGCACTGGAAGGCTaGGCAGGTGACCACGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIGALEG*AGDHAG Trigger: CCCTGCGTGGTCACCTGCCAAGCCTTCCAGTGCCCC...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR TCA 72 bp | AGGGACCTGGCTGTGGCCCAAACCATGGTTCCTTCCTaGGGAGAGAGGCACCCGTACATGGTAAAGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RDLAVAQTMVPS*GERHPYMVKWE Trigger: CTCCCACTTTACCATGTACGGGTGCCTCTCTCCTCAGGAAGGAACCATGGTTTGGGCCACAGCCAGGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGGGGCACTGGAAGGCTaGGCAGGTGACCACGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SQKLLDALWCMGRRVGITGALEG*AGDHAG Trigger: CCCTGCGTGGTCACCTGCCAAGCCTTCCAGTGCCCC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR TCA 72 bp | CACAAGACCATAGCACACTTGGGCTGGTATCGTCTGTaGCAACAGGGGCACTGGAAGGCTTGGCAGGTGACC | + |
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Preference number: 3 (lower is better) Translates to: HKTIAHLGWYRL*QQGHWKAWQVT Trigger: GGTCACCTGCCAAGCCTTCCAGTGCCCCTGTTGTCACAGACGATACCAGCCCAAGTGTGCTATGGTCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTCTTTGCCATCAGCCCTaGGGGGTGGGGCCCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SQKLLDALWCMGRRVGITLCHQP*GVGPCS Trigger: GGAACAGGGCCCCACCCCCAAGGGCTGATGGCAAAG...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCATCCCTGGGGTTTCTTaGCCATCAGCCCTTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIIPGVS*PSALGG Trigger: ACCCCCAAGGGCTGATGGCAAAGAAACCCCAGGGAT...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CCA 72 bp | GGGATGAGGAGGCACAGAACACTTAGCTATCACCATTaGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GMRRHRTLSYHH*PVRTEAGEGVG Trigger: ACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCAATGGTGATAGCTAAGTGTTCTGTGCCTCCTCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CCA 72 bp | GACGGACACAAAAAGCTAATTAGGGCTGGGCAGTGGTaGCGCACGCCTTTAATCCTAACACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DGHKKLIRAGQW*RTPLILTLGRQ Trigger: CTGCCTCCCAAGTGTTAGGATTAAAGGCGTGCGCCACCACTGCCCAGCCCTAATTAGCTTTTTGTGTCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTACTTTGCCATCAGCCCTaGGGGGTGGGGCCCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWCMGRRVGITDNRYMILLCHQP*GVGPCS Trigger: GGAACAGGGCCCCACCCCCAAGGGCTGATGGCAAAG...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR TCA 72 bp | GCCCTGTTCCATAAGTTCTGTAAAGTGAGACGTGCCTaGTGCTGGGGTTTCTTCCCTGACTGCCTCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALFHKFCKVRRA*CWGFFPDCLSA Trigger: AGCAGAGAGGCAGTCAGGGAAGAAACCCCAGCATCAGGCACGTCTCACTTTACAGAACTTATGGAACAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CCA 72 bp | CTAGACGGACACAAAAAGCTAATTAGGGCTGGGCAGTaGTGGCGCACGCCTTTAATCCTAACACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LDGHKKLIRAGQ*WRTPLILTLGR Trigger: CCTCCCAAGTGTTAGGATTAAAGGCGTGCGCCACCACTGCCCAGCCCTAATTAGCTTTTTGTGTCCGTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCCTGTGTGCCAGGAACTaGGCTAAGGACGCAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLVRGAGLSLLQSKPVRILCARN*AKDAVL Trigger: TAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAG...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR TCA 72 bp | GGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTaGGAATCCAGAATTTCAGGTCAAACAGGGGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GELGLACSSPSQ*ESRISGQTGEI Trigger: TATTTCCCCTGTTTGACCTGAAATTCTGGATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR GCA 72 bp | ACTGTCACTGTCACACTCCTCTCAAAAGCTGCTGGATaGTCTATGGTGCATGGGGAGAAGGGTAGGAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: TVTVTLLSKAAG*SMVHGEKGRNY Trigger: GTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGAGGAGTGTGACAGTGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CCA 72 bp | CTGTCACACTCCTCTCAAAAGCTGCTGGATGCTCTATaGTGCATGGGGAGAAGGGTAGGAATTACTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSHSSQKLLDAL*CMGRRVGITDN Trigger: GTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGAGGAGTGTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAACTGTGTGCCAGGAACTaGGCTAAGGACGCAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LHKPTSQSNTGILGIREKLCARN*AKDAVL Trigger: TAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAG...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR TCA 72 bp | CAGAATTTCAGGTCAAACAGGGGAAATACTGTGGGATaGGGAGGCACAGAACACTTAGCTATCACCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QNFRSNRGNTVG*GGTEHLAITIG Trigger: GCCAATGGTGATAGCTAAGTGTTCTGTGCCTCCTCATCCCACAGTATTTCCCCTGTTTGACCTGAAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CCA 72 bp | CTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTaGTCACGAGACATGATTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSYTKMQLKPNL*SRDMIVCVCVC Trigger: ACACACACACACACACACAATCATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTTCTGTGTGCCGTGGCTaGGGCGCACAGCCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFSVCRG*GAQPAG Trigger: TCCTGCGGGCTGTGCGCCGCAGCCACGGCACACAGA...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTTGCGGCTCTTCTGTGTaGCGTGGCTGCGGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFCGSSV*RGCGAQ Trigger: CTGTGCGCCGCAGCCACGGCACACAGAAGAGCCGCA...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTAGGGTGCGGAACTGGTaGAAGCGGAAGGGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFRVRNW*KRKGWA Trigger: GGCCCACCCCTTCCGCTTCCACCAGTTCCGCACCCT...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTGGGGCTAGTGTCTGGTaGATGGTGTGGTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFGASVW*MVWSMG Trigger: CCCCATCGACCACACCATCCACCAGACACTAGCCCC...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTGGAAGCGGTAGTAGTTaGTGCTACGCTGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFGSGSS*CYAARP Trigger: AGGCCTGGCAGCGTAGCATCAACTACTACCGCTTCC...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTGCACAGCCCGCAGGATaGCCTGGTAGGAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLIHTVSSAQAQDTEQVAQPAG*PGRRPA Trigger: TGCTGGCCTCCTACCAGGGCATCCTGCGGGCTGTGC...AACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTGCGGCTCTTCTGTGTaGCGTGGCTGCGGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLIHTVSSAQAQDTEQVCGSSV*RGCGAQ Trigger: CTGTGCGCCGCAGCCACGGCACACAGAAGAGCCGCA...AACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTTGTGAGTGGTCTCACTaGCAAAGCAGTACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFCEWSH*QSSTAP Trigger: CGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACA...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTCGGCTGCCTTCAGGGTaGGGAACTGGTGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLIHTVSSAQAQDTEQVRLPSG*GTGGSG Trigger: TCCGCTTCCACCAGTTCCGCACCCTGAAGGCAGCCG...AACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCAGGACAGGCAGTTGGCTaGGAAGCCCACCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPGQAVG*EAHHQH Trigger: GTGCTGGTGGTGGGCTTCCCAGCCAACTGCCTGTCC...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGGACCAGTCGTCGTGCTaGAGCACGTACTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQDQSSC*STYCSQ Trigger: CTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTC...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCTCTGTGTGCCGTGGCTaGGGCGCACAGCCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRISVCRG*GAQPAG Trigger: TCCTGCGGGCTGTGCGCCGCAGCCACGGCACACAGA...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTGGGGCTAGTGTCTGGTaGATGGTGTGGTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGLIHTVSSAQAQDTEQVGASVW*MVWSMG Trigger: CCCCATCGACCACACCATCCACCAGACACTAGCCCC...AACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGAGAGGGACAGGCAGTTaGCTGGGAAGCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQRGTGS*LGSPPP Trigger: TGGTGGTGGGCTTCCCAGCCAACTGCCTGTCCCTCT...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTCAGCCAGAAGGGAAGTaGACAGATATAGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFQPEGK*TDIEQV Trigger: GACCTGTTCTATATCTGTTCACTTCCCTTCTGGCTG...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGGGAAGCGGTAGTAGTTaGTGCTACGCTGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQGSGSS*CYAARP Trigger: AGGCCTGGCAGCGTAGCATCAACTACTACCGCTTCC...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGCGGGCTAGGTCCCTGTaGGTGGTCTCACTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQRARSL*VVSLTK Trigger: CTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCG...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGGCTCATTCCGGGCCTTaGTCTGCAAGTACCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQAHSGP*SASTRS Trigger: ACTTCGGGTACTTGCAGATCAAGGCCCGGAATGAGC...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRILSTSR*IWSLRL Trigger: GAGCCGCAAGGACCAGATTCAGCGGCTGGTGCTCAG...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGGCTGAATCTGGTCCTTaGGGCTCTTCTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQAESGP*GSSVCR Trigger: ACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGC...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGCTAGTGTCTGGTGGATaGTGTGGTCGATGGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQLVSGG*CGRWGK Trigger: CTTGCCCCATCGACCACACCATCCACCAGACACTAG...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCGGACAGGCAGTTGGCTaGGAAGCCCACCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIGQAVG*EAHHQH Trigger: GTGCTGGTGGTGGGCTTCCCAGCCAACTGCCTGTCC...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTGTCTGGAAGGCTGAGTaGAGCTTGGTTAACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFVWKAE*SLVNNS Trigger: TGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGAC...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTAAGGACCGAGGCTGGGGAAGGTGTAGGTCTTTCTGGCATGCAGCCATGTGAGTGGTCTCACTaGCAAAGCAGTACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: WPVRTEAGEGVGLSGMQPCEWSH*QSSTAP Trigger: CGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACA...TGGCTGCATGCCAGAAAGACCTACACCTTCCCCAGCCTCGGTCCTTACAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCACTGACACCCACGGCTaGCTTCAGGGTGCGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRITDTHG*LQGAEL Trigger: CAGTTCCGCACCCTGAAGGCAGCCGTGGGTGTCAGT...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTGCACAGCCCGCAGGATaGCCTGGTAGGAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLAQPAG*PGRRPA Trigger: TGCTGGCCTCCTACCAGGGCATCCTGCGGGCTGTGC...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGCTGAATCTGGTCCTTaGGGCTCTTCTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTAESGP*GSSVCR Trigger: ACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLLSTSR*IWSLRL Trigger: GAGCCGCAAGGACCAGATTCAGCGGCTGGTGCTCAG...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCCGGGCTAGGTCCCTGTaGGTGGTCTCACTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIRARSL*VVSLTK Trigger: CTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCG...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGTCTCATAGAGGAGGATaGCACACACCTGGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQSHRGG*HTPGRI Trigger: TATCCTGCCAGGTGTGTGGCATCCTCCTCTATGAGA...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTCAGCCAGAAGGGAAGTaGACAGATATAGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLIHTVSSAQAQDTEQVQPEGK*TDIEQV Trigger: GACCTGTTCTATATCTGTTCACTTCCCTTCTGGCTG...AACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTCGGCTGCCTTCAGGGTaGGGAACTGGTGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITRLPSG*GTGGSG Trigger: TCCGCTTCCACCAGTTCCGCACCCTGAAGGCAGCCG...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGGCACAGCCCGCAGGATaGCCTGGTAGGAGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMAQPAG*PGRRPA Trigger: TGCTGGCCTCCTACCAGGGCATCCTGCGGGCTGTGC...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAATCTGTGTGCCGTGGCTaGGGCGCACAGCCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHKPTSQSNTGILGIREKSVCRG*GAQPAG Trigger: TCCTGCGGGCTGTGCGCCGCAGCCACGGCACACAGA...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGGACAGGCAGTTGGCTaGGAAGCCCACCACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITGQAVG*EAHHQH Trigger: GTGCTGGTGGTGGGCTTCCCAGCCAACTGCCTGTCC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCACACAGTCAGCAGTGCCCAGGCTCAGGACACGGAGCAGGTTTCCAGAGAGGAAGCCCACGCTaGTGTAAATGTTCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHSHSQQCPGSGHGAGFQRGSPR*CKCSHR Trigger: TCTATGAGAACATTTACATCAGCGTGGGCTTCCTCT...CTGGAAACCTGCTCCGTGTCCTGAGCCTGGGCACTGCTGACTGTGTGAATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTATGCGGCTCTTCTGTGTaGCGTGGCTGCGGCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILCGSSV*RGCGAQ Trigger: CTGTGCGCCGCAGCCACGGCACACAGAAGAGCCGCA...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGGGGCTAGTGTCTGGTaGATGGTGTGGTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITGASVW*MVWSMG Trigger: CCCCATCGACCACACCATCCACCAGACACTAGCCCC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAAGGGTGCGGAACTGGTaGAAGCGGAAGGGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILRVRNW*KRKGWA Trigger: GGCCCACCCCTTCCGCTTCCACCAGTTCCGCACCCT...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAAGGGTGCGGAACTGGTaGAAGCGGAAGGGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHKPTSQSNTGILGIREKRVRNW*KRKGWA Trigger: GGCCCACCCCTTCCGCTTCCACCAGTTCCGCACCCT...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTCGGGCTAGGTCCCTGTaGGTGGTCTCACTGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITRARSL*VVSLTK Trigger: CTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCG...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTACGGCTGCCTTCAGGGTaGGGAACTGGTGGAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILRLPSG*GTGGSG Trigger: TCCGCTTCCACCAGTTCCGCACCCTGAAGGCAGCCG...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAAGGCTGAGTGGAGCTTaGTTAACAATTCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTRLSGA*LTIQVP Trigger: AGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCT...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAGTCTGGAAGGCTGAGTaGAGCTTGGTTAACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTVWKAE*SLVNNS Trigger: TGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGAC...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCCAGCCAGAAGGGAAGTaGACAGATATAGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIQPEGK*TDIEQV Trigger: GACCTGTTCTATATCTGTTCACTTCCCTTCTGGCTG...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAGACCAGTCGTCGTGCTaGAGCACGTACTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHKPTSQSNTGILGIREKDQSSC*STYCSQ Trigger: CTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTC...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAGACCAGTCGTCGTGCTaGAGCACGTACTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILDQSSC*STYCSQ Trigger: CTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTC...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTTGTGAGTGGTCTCACTaGCAAAGCAGTACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLCEWSH*QSSTAP Trigger: CGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACA...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAACTGACACCCACGGCTaGCTTCAGGGTGCGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHKPTSQSNTGILGIREKTDTHG*LQGAEL Trigger: CAGTTCCGCACCCTGAAGGCAGCCGTGGGTGTCAGT...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR GCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGCTGAATCTGGTCCTTaGGGCTCTTCTGTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITAESGP*GSSVCR Trigger: ACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTGGATGGTGTGGTCGATaGGGCAAGATAGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLGWCGR*GKIVRS Trigger: ACTCCTCACTATCTTGCCCCATCGACCACACCATCC...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTGTCTGGTGGATGGTGTaGTCGATGGGGCAAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLVWWMV*SMGQDS Trigger: ACTATCTTGCCCCATCGACCACACCATCCACCAGAC...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAAGAGGGACAGGCAGTTaGCTGGGAAGCCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILRGTGS*LGSPPP Trigger: TGGTGGTGGGCTTCCCAGCCAACTGCCTGTCCCTCT...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CAA 72 bp | CCAGGGCTACACAGAGAAACCCTGTGTGCCAGGAACTaGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRETLCARN*AKDAVLGLSLL Trigger: AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGTTTCTCTGTGTAGCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR TCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGGCTCATTCCGGGCCTTaGTCTGCAAGTACCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMAHSGP*SASTRS Trigger: ACTTCGGGTACTTGCAGATCAAGGCCCGGAATGAGC...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR TCA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCAGAGGAAGCCCACGCTaGTGTAAATGTTCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVRGAGLSLLQSKPVRIRGSPR*CKCSHR Trigger: TCTATGAGAACATTTACATCAGCGTGGGCTTCCTCT...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR TCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAGGAAGCGGTAGTAGTTaGTGCTACGCTGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILGSGSS*CYAARP Trigger: AGGCCTGGCAGCGTAGCATCAACTACTACCGCTTCC...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| 3UTR CAA 72 bp | ATACAGCACTCCTTAGTAAGGGGAGCTGGGCTTAGCTaGCTCCAGTCCAAGCCAGTGAGAATCCAGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQHSLVRGAGLS*LQSKPVRIQNF Trigger: GAAATTCTGGATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGAGTGCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTGTGTGCCAGGAACTTGGCTAAGGACGCAGTTTTAGGCCTAAGTCTTCTTAGAGGAAGCCCACGCTaGTGTAAATGTTCTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLCARNLAKDAVLGLSLLRGSPR*CKCSHR Trigger: TCTATGAGAACATTTACATCAGCGTGGGCTTCCTCT...AAGAAGACTTAGGCCTAAAACTGCGTCCTTAGCCAAGTTCCTGGCACACAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAGGATGGTGTGGTCGATaGGGCAAGATAGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILGWCGR*GKIVRS Trigger: ACTCCTCACTATCTTGCCCCATCGACCACACCATCC...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAGTCTGGTGGATGGTGTaGTCGATGGGGCAAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHKPTSQSNTGILGIREKVWWMV*SMGQDS Trigger: ACTATCTTGCCCCATCGACCACACCATCCACCAGAC...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTATCTCATAGAGGAGGATaGCACACACCTGGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILSHRGG*HTPGRI Trigger: TATCCTGCCAGGTGTGTGGCATCCTCCTCTATGAGA...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTGTCTGGAAGGCTGAGTaGAGCTTGGTTAACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQKLLDALWCMGRRVGITVWKAE*SLVNNS Trigger: TGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGAC...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGGTTAGTTCATaGCACTTAGGAACTCTGGGAAACTGTCACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVVSS*HLGTLGNCHCH Trigger: GTGACAGTGACAGTTTCCCAGAGTTCCTAAGTGCAATGAACTAACCACACACACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCTCCTATACCAAAATGCAGCTTAAGCCAAACCTGTGGTCACGAGACATGAGGCTGAGTGGAGCTTaGTTAACAATTCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSYTKMQLKPNLWSRDMRLSGA*LTIQVP Trigger: AGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCT...CATGTCTCGTGACCACAGGTTTGGCTTAAGCTGCATTTTGGTATAGGAGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGTGCATGGGGAGAAGGGTAGGAATTACTGACAACAGATACATGATCCTAAGGCTGAGTGGAGCTTaGTTAACAATTCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWCMGRRVGITDNRYMILRLSGA*LTIQVP Trigger: AGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCT...TAGGATCATGTATCTGTTGTCAGTAATTCCTACCCTTCTCCCCATGCACCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS TCA 90 bp | AGAAAGCAAGCCAGGAAGATGACCACGGTGCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTCTTCTGTGTGCCGTGGCTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RKQARKMTTVLSTSR*IWSLRLFCVPWLRR Trigger: GCGCCGCAGCCACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGCGGCTGGTGCTCAGCACCGTGGTCATCTTCCTGGCTTGCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS CCA 90 bp | GAGGGCCCTCCCACTCCCAGTGAGCTAGGGGTCTGGAAGGCTGAGTaGAGCTTGGTTAACAATTCAGGTTCCTCGCCCTGGGCCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: EGPPTPSELGVWKAE*SLVNNSGSSPWAPL Trigger: AAGTGGGGCCCAGGGCGAGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGACCCCTAGCTCACTGGGAGTGGGAGGGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS TCA 90 bp | GTAAGGACAGCTAGGCAGGCTCCTCGGAGGCGGGCTAGGTCCCTGTaGGTGGTCTCACTGACAAAGCAGTACAGCACCGGGTCAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VRTARQAPRRRARSL*VVSLTKQYSTGSAT Trigger: TGTAGCTGACCCGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCGCCTCCGAGGAGCCTGCCTAGCTGTCCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS CCA 90 bp | AACCCCACTGTGGAGGGCCCTCCCACTCCCAGTGAGCTAGGGGTCTaGAAGGCTGAGTGGAGCTTGGTTAACAATTCAGGTTCCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NPTVEGPPTPSELGV*KAEWSLVNNSGSSP Trigger: GGGCGAGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGACCCCTAGCTCACTGGGAGTGGGAGGGCCCTCCACAGTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
||
| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAAGCCAGCCTGGTCTACACTGGTCAGCAGCTCCTaGGCCCAGATGAGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TWEAEAGGFLSSKPAWSTLVSSS*AQMSTL Trigger: CAGTGTGCTCATCTGGGCCAAGGAGCTGCTGACCAG...TGTAGACCAGGCTGGCTTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR CAA 90 bp | GGTGACCACGCAGGGTCCTACCCTCCTCTCCGCACCCCAGGCCTGCTGCTCTTTACGTTGAAGATGCTCTaGGCAAACTCACAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GDHAGSYPPLRTPGLLLFTLKML*ANSQFL Trigger: GAGAAACTGTGAGTTTGCCAAGAGCATCTTCAACGT...AAAGAGCAGCAGGCCTGGGGTGCGGAGAGGAGGGTAGGACCCTGCGTGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR CAA 90 bp | TCCTTAGTAAGGGGAGCTGGGCTTAGCTTGCTCCAGTCCAAGCCAGTGAGAATCCTGGTCAGCAGCTCCTaGGCCCAGATGAGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: SLVRGAGLSLLQSKPVRILVSSS*AQMSTL Trigger: CAGTGTGCTCATCTGGGCCAAGGAGCTGCTGACCAG...GATTCTCACTGGCTTGGACTGGAGCAAGCTAAGCCCAGCTCCCCTTACTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 90 bp | CAATGGTCAGGTTACACAGGTACACTCCCAGCTCATTCCGGGCCTTaGTCTGCAAGTACCCGAAGTAGAGGGACAGGCAGTTGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: QWSGYTGTLPAHSGP*SASTRSRGTGSWLG Trigger: TCCCAGCCAACTGCCTGTCCCTCTACTTCGGGTACTTGCAGATCAAGGCCCGGAATGAGCTGGGAGTGTACCTGTGTAACCTGACCATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAAAGCTGCTGGATGCTCTATGGTGCATGGGGAGAAGGGTAGGAATTACTCTGGTCAGCAGCTCCTaGGCCCAGATGAGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: SQKLLDALWCMGRRVGITLVSSS*AQMSTL Trigger: CAGTGTGCTCATCTGGGCCAAGGAGCTGCTGACCAG...AGTAATTCCTACCCTTCTCCCCATGCACCATAGAGCATCCAGCAGCTTTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 90 bp | GGACCAGTCGTCGTGCTGAAGCACGTACTGCAGCCAGAAGGGAAGTaGACAGATATAGAACAGGTCTGCAATGGTCAGGTTACACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: GPVVVLKHVLQPEGK*TDIEQVCNGQVTQV Trigger: TACCTGTGTAACCTGACCATTGCAGACCTGTTCTATATCTGTTCACTTCCCTTCTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS-3UTR CAA 90 bp | CTACATAAACCCACCTCACAGTCCAACACAGGGATACTTGGCATAAGAGAGAAAACGTTGAAGATGCTCTaGGCAAACTCACAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LHKPTSQSNTGILGIREKTLKML*ANSQFL Trigger: GAGAAACTGTGAGTTTGCCAAGAGCATCTTCAACGT...TTTCTCTCTTATGCCAAGTATCCCTGTGTTGGACTGTGAGGTGGGTTTATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | GCTAGGCAGGCTCCTCGGAGGCGGGCTAGGTCCCTGTaGGTGGTCTCACTGACAAAGCAGTACAGCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: ARQAPRRRARSL*VVSLTKQYSTG Trigger: CCCGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCGCCTCCGAGGAGCCTGCCTAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | GCCAGGAAGATGACCACGGTGCTGAGCACCAGCCGCTaGATCTGGTCCTTGCGGCTCTTCTGTGTGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ARKMTTVLSTSR*IWSLRLFCVPW Trigger: CCACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGCGGCTGGTGCTCAGCACCGTGGTCATCTTCCTGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | CTCGGAGGCGGGCTAGGTCCCTGTGAGTGGTCTCACTaGCAAAGCAGTACAGCACCGGGTCAGCTACACAGT | + |
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Preference number: 6 (lower is better) Translates to: LGGGLGPCEWSH*QSSTAPGQLHS Trigger: ACTGTGTAGCTGACCCGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCGCCTCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS CCA 72 bp | CCCACTCCCAGTGAGCTAGGGGTCTGGAAGGCTGAGTaGAGCTTGGTTAACAATTCAGGTTCCTCGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PTPSELGVWKAE*SLVNNSGSSPW Trigger: CCAGGGCGAGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGACCCCTAGCTCACTGGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS CCA 72 bp | GTGGAGGGCCCTCCCACTCCCAGTGAGCTAGGGGTCTaGAAGGCTGAGTGGAGCTTGGTTAACAATTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VEGPPTPSELGV*KAEWSLVNNSG Trigger: ACCTGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGACCCCTAGCTCACTGGGAGTGGGAGGGCCCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | TGGCAGGATAGGTCACCATGGGACCAGTCGTCGTGCTaGAGCACGTACTGCAGCCAGAAGGGAAGTGAACAG | + |
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Preference number: 6 (lower is better) Translates to: WQDRSPWDQSSC*STYCSQKGSEQ Trigger: CTGTTCACTTCCCTTCTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTCCCATGGTGACCTATCCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | GGTTACACAGGTACACTCCCAGCTCATTCCGGGCCTTaGTCTGCAAGTACCCGAAGTAGAGGGACAGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GYTGTLPAHSGP*SASTRSRGTGS Trigger: ACTGCCTGTCCCTCTACTTCGGGTACTTGCAGATCAAGGCCCGGAATGAGCTGGGAGTGTACCTGTGTAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS CCA 72 bp | CGGTCACATAGACCACTGGGGCTAGTGTCTGGTGGATaGTGTGGTCGATGGGGCAAGATAGTGAGGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSHRPLGLVSGG*CGRWGKIVRSF Trigger: AAAACTCCTCACTATCTTGCCCCATCGACCACACCATCCACCAGACACTAGCCCCAGTGGTCTATGTGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS TCA 72 bp | GTCGTGCTGAAGCACGTACTGCAGCCAGAAGGGAAGTaGACAGATATAGAACAGGTCTGCAATGGTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VVLKHVLQPEGK*TDIEQVCNGQV Trigger: AACCTGACCATTGCAGACCTGTTCTATATCTGTTCACTTCCCTTCTGGCTGCAGTACGTGCTTCAGCACGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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| CDS CCA 72 bp | AGAAGGGAAGTGAACAGATATAGAACAGGTCTGCAATaGTCAGGTTACACAGGTACACTCCCAGCTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: RREVNRYRTGLQ*SGYTGTLPAHS Trigger: GGAATGAGCTGGGAGTGTACCTGTGTAACCTGACCATTGCAGACCTGTTCTATATCTGTTCACTTCCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053668.10 ENSMUST00000110065.8 ENSMUST00000110066.8 |
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