Pregenerated sensors for GPR61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046793Ensembl transcript IDs: ENSMUST00000062028.8, ENSMUST00000116284.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTaGGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: DISWTMETPPFPCPT*VSCTRMSRGLEVGH Trigger: GTGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 90 bp | CCAGAGACCCTAGCCCAGACCCCAGCCAGCCGCAAAAGCAGTCCTTaGAATCATAAACCAGTCCCAAGCTTTATTTCCCTCCTGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: PETLAQTPASRKSSP*NHKPVPSFISLLVS Trigger: GGACACCAGGAGGGAAATAAAGCTTGGGACTGGTTTATGATTTCAAGGACTGCTTTTGCGGCTGGCTGGGGTCTGGGCTAGGGTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 90 bp | AGTCCAAGGCTTTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTaGCCCAGGAAACACCAAGCAAAAGCTAAGTCCAGAGACCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: SPRLFATCPSCRFWA*PRKHQAKAKSRDPS Trigger: GCTAGGGTCTCTGGACTTAGCTTTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAAAGCCTTGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 90 bp | GCATCCTGCCTCCTGCTCATCTCTGCTGAGGTCAGGACCCACACTTaGTTTCATATGTGCAGGAAAGAGAATAGGAGAGAGTTGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: ASCLLLISAEVRTHT*FHMCRKENRRELQS Trigger: ACTCTGCAACTCTCTCCTATTCTCTTTCCTGCACATATGAAATCAAGTGTGGGTCCTGACCTCAGCAGAGATGAGCAGGAGGCAGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 90 bp | ACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCCCAATTCTCTaGTCTCTCTCCAACCTAGGGCTGCAGGTAGGAGACAGATTTAAG | + |
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Preference number: 1 (lower is better) Translates to: TAPIVLINKQQGPIL*SLSNLGLQVGDRFK Trigger: CTTAAATCTGTCTCCTACCTGCAGCCCTAGGTTGGAGAGAGAGCAGAGAATTGGGCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 90 bp | ATAGGAGAGAGTTGCAGAGTTGTTCTGTCTTCTCCTCCACTACCCTaGTTGCAATTTTTCCTTGCTGCTGGCCAAATCCAATTCACCCCT | + |
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Preference number: 1 (lower is better) Translates to: IGESCRVVLSSPPLP*LQFFLAAGQIQFTP Trigger: AGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGAACAACTCTGCAACTCTCTCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 90 bp | TGTTCTGTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTTGCTaGTGGCCAAATCCAATTCACCCCTACAGGTCTTCTCACTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: CSVFSSTTLIAIFPC*WPNPIHPYRSSHSR Trigger: TCTAGAGTGAGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 90 bp | AGTTGTTCTGTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTTaGTGCTGGCCAAATCCAATTCACCCCTACAGGTCTTCTCACTCT | + |
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Preference number: 1 (lower is better) Translates to: SCSVFSSTTLIAIFP*CWPNPIHPYRSSHS Trigger: AGAGTGAGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGAACAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CCA 90 bp | TCTGTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTTGCTGCTaGCCAAATCCAATTCACCCCTACAGGTCTTCTCACTCTAGACAT | + |
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Preference number: 1 (lower is better) Translates to: SVFSSTTLIAIFPCC*PNPIHPYRSSHSRH Trigger: ATGTCTAGAGTGAGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 90 bp | TTGCTTACACTCCCCACACTTTCCGCATCTGCATGGAGTCTCTTATaGATCAACTTCAATATATTCTCAAAAGTCAGAACCATAGATATA | + |
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Preference number: 1 (lower is better) Translates to: LLTLPTLSASAWSLL*INFNIFSKVRTIDI Trigger: TATATCTATGGTTCTGACTTTTGAGAATATATTGAAGTTGATGCATAAGAGACTCCATGCAGATGCGGAAAGTGTGGGGAGTGTAAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CAA 90 bp | GGAACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTaGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GTGRHFMDNGNPTLP*PDLSLLYPNVQGAG Trigger: TCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR CAA 90 bp | TTCCCTCCCCCAATAGTCAAAGATCCCAGCCAAGTCCAAGGCTTTTaGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FPPPIVKDPSQVQGF*PHVHPVDSGPDPGN Trigger: GTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAAAGCCTTGGACTTGGCTGGGATCTTTGACTATTGGGGGAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCTTGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGCAATTTTTCCTTGCTaGTGGCCAAATCCAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: LPLPDLSLLYPNVQGAGSAIFPC*WPNPIH Trigger: GTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGC...ACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR GCA 90 bp | TACAAATATCTGGTCGAGTTAGCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACAGGGCATCCTGCCTCCTaGTCATCTCTGCTGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YKYLVELACEVLEGRGGTGHPAS*SSLLRS Trigger: TGACCTCAGCAGAGATGAGCAGGAGGCAGGATGCCC...TGTGCCACCTCTGCCTTCAAGGACTTCACAGGCTAACTCGACCAGATATTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAATATCTGGTCGAGTTAGCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACATTCCCTTGCCCGACCTaGGTCTCTTGTACCCGAATG | + |
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Preference number: 2 (lower is better) Translates to: YKYLVELACEVLEGRGGTFPCPT*VSCTRM Trigger: CATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAA...TGTGCCACCTCTGCCTTCAAGGACTTCACAGGCTAACTCGACCAGATATTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR TCA 90 bp | CAACGTCTCACCATACCCAGGTTCCCTCCCCCAATAGTCAAAGATCCCAGCCAACGCAAAAGCAGTCCTTaGAATCATAAACCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QRLTIPRFPPPIVKDPSQRKSSP*NHKPVP Trigger: TGGGACTGGTTTATGATTTCAAGGACTGCTTTTGCG...TTGGCTGGGATCTTTGACTATTGGGGGAGGGAACCTGGGTATGGTGAGACGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCACCCTTTTCTCTCATCAACGTCTCACCATACCCAGGTTCCCTCCCCCACGCAAAAGCAGTCCTTaGAATCATAAACCAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FVTLFSHQRLTIPRFPPPRKSSP*NHKPVP Trigger: TGGGACTGGTTTATGATTTCAAGGACTGCTTTTGCG...TGGGGGAGGGAACCTGGGTATGGTGAGACGTTGATGAGAGAAAAGGGTGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR CAA 90 bp | GAGTTGTTCTGTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTaGCTGCTGGCCAAATCCAATTCACCCCTACAGGTCTTCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: ELFCLLLHYPDCNFS*LLAKSNSPLQVFSL Trigger: GAGTGAGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGAACAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAATGTCGATTCTGGGCCTaGCCCAGGAAACACCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ANFESNDGEQGDISWTMECRFWA*PRKHQA Trigger: TGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACA...TTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAATTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR CAA 90 bp | TCTCTCTCCAACCTAGGGCTGCAGGTAGGAGACAGATTTAAGTCTTaGTCACAGAAGCTAATTTTGAGAGCAATGATGGGGAACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLSNLGLQVGDRFKS*SQKLILRAMMGNRE Trigger: CTCCCTGTTCCCCATCATTGCTCTCAAAATTAGCTTCTGTGACAAAGACTTAAATCTGTCTCCTACCTGCAGCCCTAGGTTGGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCAAAGTCCAAGGCTTTTTaGCACATGTCCATCCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: FESNDGEQGDISWTMETPKSKAF*HMSILS Trigger: CGACAGGATGGACATGTGGCAAAAAGCCTTGGACTT...TGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGAAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGTCTCCTCCACTACCCTaGTTGCAATTTTTCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: EGKPVQLAINPFPLKIPLSPPLP*LQFFLA Trigger: AGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGA...CAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTTCCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCAAGTCCAAGGCTTTTTaGCACATGTCCATCCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: ILRAMMGNRETFHGQWKPKSKAF*HMSILS Trigger: CGACAGGATGGACATGTGGCAAAAAGCCTTGGACTT...GGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGCATCTGCATGGAGTCTCTTATGCATCAACTTCAATATATTCTCAAAAGTCCAAGGCCCAATTCTCTaGTCTCTCTCCAACCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SASAWSLLCINFNIFSKVQGPIL*SLSNLG Trigger: CCCTAGGTTGGAGAGAGAGCAGAGAATTGGGCCTTG...GACTTTTGAGAATATATTGAAGTTGATGCATAAGAGACTCCATGCAGATGCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATACCATTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGTGTCGATTCTGGGCCTaGCCCAGGAAACACCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KIPLLILTNTAPIVLINKCRFWA*PRKHQA Trigger: TGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACA...CTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR CAA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATaGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAG | + |
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Preference number: 2 (lower is better) Translates to: KPVQLAINPFPLKIP*LILTNTAPIVLINK Trigger: CTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR GCA 72 bp | TGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTaGCATGAGGAGATAGATCGGGGAGGCCAGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CTRMSRGLEVGH*HEEIDRGGQSW Trigger: CCAGGACTGGCCTCCCCGATCTATCTCCTCATGGCAGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR TCA 72 bp | TGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTaGGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: WTMETPPFPCPT*VSCTRMSRGLE Trigger: TTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR GCA 72 bp | TGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTaGCATGAGGAGATAGATCGGGGAGGCCAGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: CTRMSRGLEVGH*HEEIDRGGQSF Trigger: AAAGGACTGGCCTCCCCGATCTATCTCCTCATGGCAGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116284.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCTTGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTCAAGTCCAAGGCTTTTaGCCACATGTCCATCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LPLPDLSLLYPNVQGAGSQVQGF*PHVHPV Trigger: GACAGGATGGACATGTGGCAAAAAGCCTTGGACTTG...ACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR-3UTR CAA 90 bp | AACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTGGGGAGGCCAGTCCTTaGTCACCCTTTTCTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: NRETFHGQWKPHPSLARPGEASP*SPFSLI Trigger: GATGAGAGAAAAGGGTGACAAAGGACTGGCCTCCCC...AGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116284.2 |
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| 3UTR GCA 72 bp | CTAGTTACTCAAAAGACAAGGAGGGAAAGGGCATCCTaGCTCCTGCTCATCTCTGCTGAGGTCAGGACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LVTQKTRRERAS*LLLISAEVRTH Trigger: GTGGGTCCTGACCTCAGCAGAGATGAGCAGGAGGCAGGATGCCCTTTCCCTCCTTGTCTTTTGAGTAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CCA 72 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATaGACAATGGAAACCCCACCCTTCCCTTGCCCGACC | + |
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Preference number: 3 (lower is better) Translates to: FESNDGEQGDIS*TMETPPFPCPT Trigger: GGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 72 bp | CTAGCCCAGACCCCAGCCAGCCGCAAAAGCAGTCCTTaGAATCATAAACCAGTCCCAAGCTTTATTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LAQTPASRKSSP*NHKPVPSFISL Trigger: GAGGGAAATAAAGCTTGGGACTGGTTTATGATTTCAAGGACTGCTTTTGCGGCTGGCTGGGGTCTGGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 72 bp | CTCCACCCCAACCCACTTTCCCCCTTTCATGTTGAGTaGGCCAGAAATTTGTTCAGCTATAGCCCACATCCC | + |
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Preference number: 3 (lower is better) Translates to: LHPNPLSPFHVE*ARNLFSYSPHP Trigger: GGGATGTGGGCTATAGCTGAACAAATTTCTGGCTCACTCAACATGAAAGGGGGAAAGTGGGTTGGGGTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR TCA 72 bp | CTCCTGCTCATCTCTGCTGAGGTCAGGACCCACACTTaGTTTCATATGTGCAGGAAAGAGAATAGGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLLISAEVRTHT*FHMCRKENRRE Trigger: CTCTCTCCTATTCTCTTTCCTGCACATATGAAATCAAGTGTGGGTCCTGACCTCAGCAGAGATGAGCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 72 bp | GTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTTaGTGCTGGCCAAATCCAATTCACCCCTACAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: VFSSTTLIAIFP*CWPNPIHPYRS Trigger: AGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 72 bp | ATAGTCTTAATCAATAAGCAGCAAGGCCCAATTCTCTaGTCTCTCTCCAACCTAGGGCTGCAGGTAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: IVLINKQQGPIL*SLSNLGLQVGD Trigger: GTCTCCTACCTGCAGCCCTAGGTTGGAGAGAGAGCAGAGAATTGGGCCTTGCTGCTTATTGATTAAGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| 3UTR CCA 72 bp | TCCTCCACTACCCTGATTGCAATTTTTCCTTGCTGCTaGCCAAATCCAATTCACCCCTACAGGTCTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SSTTLIAIFPCC*PNPIHPYRSSH Trigger: GTGAGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR-3UTR CAA 90 bp | CATATGTGCAGGAAAGAGAATAGGAGAGAGTTGCAGAGTTGTTCTGTCTTCTCCGGCTTTCCCTCACCTTaGTCACCCTTTTCTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: HMCRKENRRELQSCSVFSGFPSP*SPFSLI Trigger: GATGAGAGAAAAGGGTGACAAAGGTGAGGGAAAGCC...GGAGAAGACAGAACAACTCTGCAACTCTCTCCTATTCTCTTTCCTGCACATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 72 bp | TTCTCCTCCACTACCCTGATTGCAATTTTTCCTTGCTaGTGGCCAAATCCAATTCACCCCTACAGGTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: FSSTTLIAIFPC*WPNPIHPYRSS Trigger: AGAAGACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CCA 72 bp | AGGTGGCACATCATATGTGTATGCCCCGGGGGATGTTaGTGTTCAGCTATTCATGCATTGAATAGAACCGAA | + |
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Preference number: 3 (lower is better) Translates to: RWHIICVCPGGC*CSAIHALNRTE Trigger: TTCGGTTCTATTCAATGCATGAATAGCTGAACACCAACATCCCCCGGGGCATACACATATGATGTGCCACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR TCA 72 bp | AGTTGCAGAGTTGTTCTGTCTTCTCCTCCACTACCCTaGTTGCAATTTTTCCTTGCTGCTGGCCAAATCCAA | + |
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Preference number: 3 (lower is better) Translates to: SCRVVLSSPPLP*LQFFLAAGQIQ Trigger: TTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACAGAACAACTCTGCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CCA 72 bp | CATGAAACACTTGCCGAGATGGCAAATGAGAAGATGTaGGCCGCTTTCTTACCTTGTCTCAGAGTAAGCATT | + |
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Preference number: 3 (lower is better) Translates to: HETLAEMANEKM*AAFLPCLRVSI Trigger: AATGCTTACTCTGAGACAAGGTAAGAAAGCGGCCCACATCTTCTCATTTGCCATCTCGGCAAGTGTTTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR GCA 72 bp | CTCCCCACACTTTCCGCATCTGCATGGAGTCTCTTATaGATCAACTTCAATATATTCTCAAAAGTCAGAACC | + |
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Preference number: 3 (lower is better) Translates to: LPTLSASAWSLL*INFNIFSKVRT Trigger: GGTTCTGACTTTTGAGAATATATTGAAGTTGATGCATAAGAGACTCCATGCAGATGCGGAAAGTGTGGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| 3UTR CCA 72 bp | GTTTTGCTTACACTCCCCACACTTTCCGCATCTGCATaGAGTCTCTTATGCATCAACTTCAATATATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VLLTLPTLSASA*SLLCINFNIFS Trigger: TGAGAATATATTGAAGTTGATGCATAAGAGACTCCATGCAGATGCGGAAAGTGTGGGGAGTGTAAGCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
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| CDS-3UTR GCA 90 bp | GCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTAGAGACTCAGAGCGTTaGCGGGGCGTCTCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPESLVPECPGGWKWVTRDSER*RGVSIH Trigger: GTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCT...AGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTGGCAGTAGAGGGACCTaGGGTTTGAAGGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARPESLVPECPGGWKWVTGSRGT*GLKGPS Trigger: GGAAGGGCCCTTCAAACCCCAGGTCCCTCTACTGCC...AGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| 3UTR CAA 72 bp | GGAAACCCCACCCTTCCCTTGCCCGACCTGAGTCTCTaGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNPTLPLPDLSL*YPNVQGAGSGS Trigger: TGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCTTGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTCTCCACCTGTCCTGCTaGAATGGGCTGTGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLPDLSLLYPNVQGAGSLHLSC*NGLCAQ Trigger: CTGAGCGCACAGCCCATTTCAGCAGGACAGGTGGAG...ACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAAGCGGCCCGTGTTGCATaGCAGCCACGCGAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CHMSILSILGLTQETPSKAARVA*QPREPL Trigger: GAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGC...TTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | CAACGTCTCACCATACCCAGGTTCCCTCCCCCAATAGTCAAAGATCCCAGCCAAACGTCCGGTGTGGGGTaGTCTGGTGAGCCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLTIPRFPPPIVKDPSQTSGVG*SGEPRS Trigger: GCTCCGGGGCTCACCAGACCACCCCACACCGGACGT...TTGGCTGGGATCTTTGACTATTGGGGGAGGGAACCTGGGTATGGTGAGACGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCTGTGGGGTGGTCTGGTaGGCCCCGGAGCTGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FCHMSILSILGLTQETPSCGVVW*APELVT Trigger: GGTTACCAGCTCCGGGGCTCACCAGACCACCCCACA...GCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCGCGGCCCGTGTTGCATaGCAGCCACGCGAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AMMGNRETFHGQWKPHPSAARVA*QPREPL Trigger: GAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGC...GGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCGCGTCTCCATCCACGTaGGCAGCGGCCCGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCHMSILSILGLTQETPSASPST*AAARVA Trigger: TGCAACACGGGCCGCTGCCCACGTGGATGGAGACGC...GCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | CAACGTCTCACCATACCCAGGTTCCCTCCCCCAATAGTCAAAGATCCCAGCCAAGCGTCTCCATCCACGTaGGCAGCGGCCCGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLTIPRFPPPIVKDPSQASPST*AAARVA Trigger: TGCAACACGGGCCGCTGCCCACGTGGATGGAGACGC...TTGGCTGGGATCTTTGACTATTGGGGGAGGGAACCTGGGTATGGTGAGACGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAACCCAAACGTCCGGTGTaGGGTGGTCTGGTGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CHMSILSILGLTQETPSKPKRPV*GGLVSP Trigger: GGGGCTCACCAGACCACCCCACACCGGACGTTTGGG...TTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACATCATATGTGTATGCCCCGGGGCCAGCCCTAGTGTCATaGGCACCTCGTAGCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ACEVLEGRGGTSYVYAPGPALVS*APRSAL Trigger: CAATGCGCTACGAGGTGCGCATGACACTAGGGCTGG...CCCCGGGGCATACACATATGATGTGCCACCTCTGCCTTCAAGGACTTCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR GCA 90 bp | TACAAATATCTGGTCGAGTTAGCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACAGGCAGCGGCCCGTGTTaGATGGCAGCCACGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKYLVELACEVLEGRGGTGSGPC*MAATRA Trigger: GGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCC...TGTGCCACCTCTGCCTTCAAGGACTTCACAGGCTAACTCGACCAGATATTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR TCA 90 bp | TGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAACTCCACCTGTCCTGCTaGAATGGGCTGTGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHMSILSILGLTQETPSKLHLSC*NGLCAQ Trigger: CTGAGCGCACAGCCCATTTCAGCAGGACAGGTGGAG...TTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCACAGGAGGACCACTGCTaGCTTCCCACCCCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: AFCHMSILSILGLTQETPQEDHC*LPTPKR Trigger: ACGTTTGGGGGTGGGAAGGCAGCAGTGGTCCTCCTG...TGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCACCCTTTTCTCTCATCAACGTCTCACCATACCCAGGTTCCCTCCCCCAAGAGACTCAGAGCGTTaGCGGGGCGTCTCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVTLFSHQRLTIPRFPPPRDSER*RGVSIH Trigger: GTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCT...TGGGGGAGGGAACCTGGGTATGGTGAGACGTTGATGAGAGAAAAGGGTGACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCAACGTCCGGTGTGGGGTaGTCTGGTGAGCCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FESNDGEQGDISWTMETPTSGVG*SGEPRS Trigger: GCTCCGGGGCTCACCAGACCACCCCACACCGGACGT...TGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCCCTGTCCTGCTGAAATaGGCTGTGCGCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCHMSILSILGLTQETPSPVLLK*AVRSGQ Trigger: TTGCCCTGAGCGCACAGCCCATTTCAGCAGGACAGG...GCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | GACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTGCCAGTCTCCTCAGCAATCTaGCCTGGGATTCGAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLSLLYPNVQGAGSGSLPVSSAI*PGIRKS Trigger: TGACTTTCGAATCCCAGGCCAGATTGCTGAGGAGAC...TGGCAGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTGAGTTTCCTGATGACTaGGGGATGGGTGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRETFHGQWKPHPSLARPEFPDD*GMGEDS Trigger: GGAGTCCTCACCCATCCCCCAGTCATCAGGAAACTC...AGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | CATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTGAGTCTCTTGCTGGCACAGAAGCCATaGCTAGGGCCTTTACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HFMDNGNPTLPLPDLSLLLAQKP*LGPLPT Trigger: TGTGGGTAAAGGCCCTAGCCATGGCTTCTGTGCCAG...CAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAAGGATGGCCAGGCTaGCAAAGCAAACGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCHMSILSILGLTQETPSKGWPG*QSKRSG Trigger: TCCTGAGCGTTTGCTTTGTCAGCCTGGCCATCCTTT...GCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATAGGCAGCGGCCCGTGTTaGATGGCAGCCACGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVQLAINPFPLKIPLLIGSGPC*MAATRA Trigger: GGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCC...TATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTGAGTTCTCAGAGGTCCCCTaGAGGAACTGCAGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RETFHGQWKPHPSLARPEFSEVP*RNCRKF Trigger: GAATTTCCTGCAGTTCCTCCAGGGGACCTCTGAGAA...CTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| 3UTR CAA 72 bp | AGACATTTCATGGACAATGGAAACCCCACCCTTCCCTaGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHFMDNGNPTLP*PDLSLLYPNVQ Trigger: CTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTAATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGGCATGGCAAGCGGCATaGGGGTCAGGGCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLILRAMMGNRETFHGQWAWQAA*GSGQPA Trigger: TGCTGGCTGCCCTGACCCTCATGCCGCTTGCCATGC...CCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAATTAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCTGTGGGGTGGTCTGGTaGGCCCCGGAGCTGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLILTNTAPIVLINKQQGCGVVW*APELVT Trigger: GGTTACCAGCTCCGGGGCTCACCAGACCACCCCACA...GCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCACAGGAGGACCACTGCTaGCTTCCCACCCCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: FESNDGEQGDISWTMETPQEDHC*LPTPKR Trigger: ACGTTTGGGGGTGGGAAGGCAGCAGTGGTCCTCCTG...TGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGGAAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGAGCCAGGAGGACCACTaGTGCCTTCCCACCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGKPVQLAINPFPLKIPLSQEDH*CLPTPK Trigger: TTTGGGGGTGGGAAGGCAGCAGTGGTCCTCCTGGCT...CAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTTCCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCCCCAAACGTCCGGTGTaGGGTGGTCTGGTGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLILTNTAPIVLINKQQGPKRPV*GGLVSP Trigger: GGGGCTCACCAGACCACCCCACACCGGACGTTTGGG...GCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | GCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCGATCCAACAGGAGCATaGAGAAGAGGGCCACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: AMMGNRETFHGQWKPHPSDPTGA*RRGPQI Trigger: AATCTGTGGCCCTCTTCTTCATGCTCCTGTTGGATC...GGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | ATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCCCAATTGCATGGCAAGCGGCATaGGGGTCAGGGCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILTNTAPIVLINKQQGPIAWQAA*GSGQPA Trigger: TGCTGGCTGCCCTGACCCTCATGCCGCTTGCCATGC...AATTGGGCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTCACCCTTTTCTCTCATCAACGTCTCACCATACCCAGGTTCCCTCCCCCACCTCTGGAGCTGCCTTaGAGAAGCAGACAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FVTLFSHQRLTIPRFPPPPLELP*RSRQTV Trigger: AACAGTTTGTCTGCTTCTTCAAGGCAGCTCCAGAGG...TGGGGGAGGGAACCTGGGTATGGTGAGACGTTGATGAGAGAAAAGGGTGACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | CATATGTGCAGGAAAGAGAATAGGAGAGAGTTGCAGAGTTGTTCTGTCTTCTCCAGCCAGGAGGACCACTaGTGCCTTCCCACCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HMCRKENRRELQSCSVFSSQEDH*CLPTPK Trigger: TTTGGGGGTGGGAAGGCAGCAGTGGTCCTCCTGGCT...GGAGAAGACAGAACAACTCTGCAACTCTCTCCTATTCTCTTTCCTGCACATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCATCCCCAAAGAGGGCGTaGTCAAAGAGGGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FESNDGEQGDISWTMETPSPKRA*SKRAEL Trigger: CAGCTCTGCCCTCTTTGACCACGCCCTCTTTGGGGA...TGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTTTGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCACACCTCGTAGCGCATTaGGTGGACCACATAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFCHMSILSILGLTQETPHLVAH*VDHIIV Trigger: TACTATTATGTGGTCCACCCAATGCGCTACGAGGTG...TGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTCTCAGCAATCTGGCCTaGGATTCGAAAGTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRETFHGQWKPHPSLARPLSNLA*DSKVNN Trigger: GTTGTTGACTTTCGAATCCCAGGCCAGATTGCTGAG...AGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| 3UTR CAA 72 bp | CCAATAGTCAAAGATCCCAGCCAAGTCCAAGGCTTTTaGCCACATGTCCATCCTGTCGATTCTGGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PIVKDPSQVQGF*PHVHPVDSGPD Trigger: GTCAGGCCCAGAATCGACAGGATGGACATGTGGCAAAAAGCCTTGGACTTGGCTGGGATCTTTGACTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTAGCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACATCATATGTGTATGCCGTCCCCTGGAGGAACTaGAGGAAATTCTCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ELACEVLEGRGGTSYVYAVPWRN*RKFSSM Trigger: CATTGAGGAGAATTTCCTGCAGTTCCTCCAGGGGAC...GGCATACACATATGATGTGCCACCTCTGCCTTCAAGGACTTCACAGGCTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAGGCAGTAGAGGGACCTaGGGTTTGAAGGGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANFESNDGEQGDISWTMEGSRGT*GLKGPS Trigger: GGAAGGGCCCTTCAAACCCCAGGTCCCTCTACTGCC...TTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAATTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | GCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCACCTCGTAGCGCATTaGGTGGACCACATAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AMMGNRETFHGQWKPHPSHLVAH*VDHIIV Trigger: TACTATTATGTGGTCCACCCAATGCGCTACGAGGTG...GGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCCTGTCCTGCTGAAATaGGCTGTGCGCTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILRAMMGNRETFHGQWKPPVLLK*AVRSGQ Trigger: TTGCCCTGAGCGCACAGCCCATTTCAGCAGGACAGG...GGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | ATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACTAACCAACACAGCCCCTCCAGCCCTAGTGTCATaGGCACCTCGTAGCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: INPFPLKIPLLILTNTAPPALVS*APRSAL Trigger: CAATGCGCTACGAGGTGCGCATGACACTAGGGCTGG...AGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTTCAGCGGAAAGGGATTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| 3UTR CAA 72 bp | TGTCTTCTCCTCCACTACCCTGATTGCAATTTTTCCTaGCTGCTGGCCAAATCCAATTCACCCCTACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLHYPDCNFS*LLAKSNSPLQV Trigger: GACCTGTAGGGGTGAATTGGATTTGGCCAGCAGCAAGGAAAAATTGCAATCAGGGTAGTGGAGGAGAAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| 3UTR CAA 72 bp | AACTACTCCACCCCAACCCACTTTCCCCCTTTCATGTaGAGTGAGCCAGAAATTTGTTCAGCTATAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYSTPTHFPPFM*SEPEICSAIAH Trigger: GTGGGCTATAGCTGAACAAATTTCTGGCTCACTCAACATGAAAGGGGGAAAGTGGGTTGGGGTGGAGTAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | ATTTACCTGGCCTTTCTGTATCCAGCCACGTTACCAATTCAAAGGCTAACACCCGATCCAACAGGAGCATaGAGAAGAGGGCCACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: IYLAFLYPATLPIQRLTPDPTGA*RRGPQI Trigger: AATCTGTGGCCCTCTTCTTCATGCTCCTGTTGGATC...GGGTGTTAGCCTTTGAATTGGTAACGTGGCTGGATACAGAAAGGCCAGGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCGCTGAAAATACCATTGCTGATACTAACCAACACAGCCCCTATAGTCTTCTGCTCCAGGAACTCTaGGGTCTCCTCAGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAENTIADTNQHSPYSLLLQEL*GLLSNL Trigger: CAGATTGCTGAGGAGACCTCAGAGTTCCTGGAGCAG...AAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTTCAGCGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCGAGTTTCCTGATGACTaGGGGATGGGTGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLILTNTAPIVLINKQQGEFPDD*GMGEDS Trigger: GGAGTCCTCACCCATCCCCCAGTCATCAGGAAACTC...GCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTCCCCCTTTCATGTTGAGTGAGCCAGAAATTTGTTCAGCTATAGCCCACGTCTCCTCAGCAATCTaGCCTGGGATTCGAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPPFMLSEPEICSAIAHVSSAI*PGIRKS Trigger: TGACTTTCGAATCCCAGGCCAGATTGCTGAGGAGAC...GTGGGCTATAGCTGAACAAATTTCTGGCTCACTCAACATGAAAGGGGGAAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | ATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCCCAATTCTGCTCCAGGAACTCTaGGGTCTCCTCAGCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTNTAPIVLINKQQGPILLQEL*GLLSNL Trigger: CAGATTGCTGAGGAGACCTCAGAGTTCCTGGAGCAG...AATTGGGCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACTGGCACAGAAGCCATaGCTAGGGCCTTTACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KPVQLAINPFPLKIPLLILAQKP*LGPLPT Trigger: TGTGGGTAAAGGCCCTAGCCATGGCTTCTGTGCCAG...TATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCTTCTCAGAGGTCCCCTaGAGGAACTGCAGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILRAMMGNRETFHGQWKPFSEVP*RNCRKF Trigger: GAATTTCCTGCAGTTCCTCCAGGGGACCTCTGAGAA...GGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAACCCCACCACTCGAAACATGCTaGAGTAGACCACAAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FESNDGEQGDISWTMETPPLETC*SRPQRS Trigger: TGATCTTTGTGGTCTACTGCAGCATGTTTCGAGTGG...TGGGGTTTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | GTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACTAACCGTCCCCTGGAGGAACTaGAGGAAATTCTCCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VQLAINPFPLKIPLLILTVPWRN*RKFSSM Trigger: CATTGAGGAGAATTTCCTGCAGTTCCTCCAGGGGAC...GGTTAGTATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | ATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCCCAATTATGTCGCTGGTGAGTTaGTGCTCCAGGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTNTAPIVLINKQQGPIMSLVS*CSRNSE Trigger: CTCAGAGTTCCTGGAGCAGCAACTCACCAGCGACAT...AATTGGGCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACCTCTGGAGCTGCCTTaGAGAAGCAGACAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPVQLAINPFPLKIPLLIPLELP*RSRQTV Trigger: AACAGTTTGTCTGCTTCTTCAAGGCAGCTCCAGAGG...TATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | ATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACTAACCAACACAGCCCCTGAGCCACTCGAAACATaGTGCAGTAGACCACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: INPFPLKIPLLILTNTAPEPLET*CSRPQR Trigger: TCTTTGTGGTCTACTGCAGCATGTTTCGAGTGGCTC...AGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTTCAGCGGAAAGGGATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR GCA 90 bp | TCCGCATCTGCATGGAGTCTCTTATGCATCAACTTCAATATATTCTCAAAAGTCATGTCGCTGGTGAGTTaGTGCTCCAGGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SASAWSLLCINFNIFSKVMSLVS*CSRNSE Trigger: CTCAGAGTTCCTGGAGCAGCAACTCACCAGCGACAT...GACTTTTGAGAATATATTGAAGTTGATGCATAAGAGACTCCATGCAGATGCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAACCACTCGAAACATGCTaGAGTAGACCACAAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ANFESNDGEQGDISWTMEPLETC*SRPQRS Trigger: TGATCTTTGTGGTCTACTGCAGCATGTTTCGAGTGG...TTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAATTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATACTCAGCAATCTGGCCTaGGATTCGAAAGTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPVQLAINPFPLKIPLLILSNLA*DSKVNN Trigger: GTTGTTGACTTTCGAATCCCAGGCCAGATTGCTGAG...TATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| 3UTR CAA 72 bp | GAGGCCAGTCCTGGAAAGAAAAGATTGGCAGTATTATaGATCAGAGTAATTTACCTGGCCTTTCTGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EASPGKKRLAVL*IRVIYLAFLYP Trigger: TGGATACAGAAAGGCCAGGTAAATTACTCTGATCAATAATACTGCCAATCTTTTCTTTCCAGGACTGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| 3UTR CAA 72 bp | CAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATaGCTGATACTAACCAACACAGCCCCTATAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLAINPFPLKIP*LILTNTAPIVL Trigger: TAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 90 bp | GTTGCCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTTGCATaGCAGCCACGCGAGCCACTCGAAACATGCTGCAGTAGACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VAGASPSTWAAARVA*QPREPLETCCSRPQ Trigger: TTGTGGTCTACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 90 bp | AGCCAGGAGGACCACTGCTGCCTTCCCACCCCCAAACGTCCGGTGTaGGGTGGTCTGGTGAGCCCCGGAGCTGGTAACCATAGTAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SQEDHCCLPTPKRPV*GGLVSPGAGNHSRA Trigger: CGCTCTACTATGGTTACCAGCTCCGGGGCTCACCAGACCACCCCACACCGGACGTTTGGGGGTGGGAAGGCAGCAGTGGTCCTCCTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGACATTTCATGGACAATGGAAACCCCACCCTTCCCTTGCCCGACCTGAGGGGCAGCGGCCCGTGTaGCATGGCAGCCACGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RETFHGQWKPHPSLARPEGQRPV*HGSHAS Trigger: GCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCC...CTCAGGTCGGGCAAGGGAAGGGTGGGGTTTCCATTGTCCATGAAATGTCTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 90 bp | GAGCTGGTAACCATAGTAGAGCGGCTACTGAGAGACTCAGAGCGTTaGCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ELVTIVERLLRDSER*RGVSIHVGSGPCCM Trigger: CATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTCAGTAGCCGCTCTACTATGGTTACCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS TCA 90 bp | AATCCCAACTCTGGGACCCCGCTGGCAGTAGAGGGACCTGGGGTTTaGAGGGCCCTTCCCAAAGTGGACGAGTTTCCTGATGACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NPNSGTPLAVEGPGV*RALPKVDEFPDDWG Trigger: CCCCCAGTCATCAGGAAACTCGTCCACTTTGGGAAGGGCCCTTCAAACCCCAGGTCCCTCTACTGCCAGCGGGGTCCCAGAGTTGGGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 90 bp | TTACCCACACGCCCACCAGCACGGAGGCCACCAGCCCTAGTGTCATaGGCACCTCGTAGCGCATTGGGTGGACCACATAATAGTAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTRPPARRPPALVS*APRSALGGPHNSSA Trigger: AGCGCTACTATTATGTGGTCCACCCAATGCGCTACGAGGTGCGCATGACACTAGGGCTGGTGGCCTCCGTGCTGGTGGGCGTGTGGGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | CGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTGGGTCACTGCCGGCACTATGGCTCCATaGGAGAGAACAGCCGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RPESLVPECPGGWKWVTAGTMAP*ERTAGV Trigger: AACCCCGGCTGTTCTCTCCAATGGAGCCATAGTGCC...GGCAGTGACCCACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 90 bp | GGTAGGGGCCGAGAAACCCAGTTCTCAGAGGTCCCCTGGAGGAACTaGAGGAAATTCTCCTCAATGGAGCCCTCACGACTAGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGRETQFSEVPWRN*RKFSSMEPSRLGSL Trigger: GAGGCTGCCTAGTCGTGAGGGCTCCATTGAGGAGAATTTCCTGCAGTTCCTCCAGGGGACCTCTGAGAACTGGGTTTCTCGGCCCCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 90 bp | GCAGCGGCCCGTGTTGCATGGCAGCCACGCGAGCCACTCGAAACATaGTGCAGTAGACCACAAAGATCAGGATCAAGGGCAGCAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAARVAWQPREPLET*CSRPQRSGSRAARS Trigger: ACTTCTTGCTGCCCTTGATCCTGATCTTTGTGGTCTACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 90 bp | AATGGAGCCCTCACGACTAGGCAGCCTCAGCTCCTCCTCTGGAGCTaGCTTGAAGAAGCAGACAAACTGTTTGCTAAGCTCGCCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NGALTTRQPQLLLWS*LEEADKLFAKLAPD Trigger: ATCCGGGGCGAGCTTAGCAAACAGTTTGTCTGCTTCTTCAAGGCAGCTCCAGAGGAGGAGCTGAGGCTGCCTAGTCGTGAGGGCTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 90 bp | CTGGTGAGTTGCTGCTCCAGGAACTCTGAGGTCTCCTCAGCAATCTaGCCTGGGATTCGAAAGTCAACAACAGGGGGTGGCTCCCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVSCCSRNSEVSSAI*PGIRKSTTGGGSRL Trigger: TAAGCGGGAGCCACCCCCTGTTGTTGACTTTCGAATCCCAGGCCAGATTGCTGAGGAGACCTCAGAGTTCCTGGAGCAGCAACTCACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTGCCCGACCTGAGTCTCTTGTACCCGAATGTCCAGGGGGCTGGAAGTAAGCAGACAAACTGTTaGCTAAGCTCGCCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPLPDLSLLYPNVQGAGSKQTNC*LSSPRI Trigger: GATCCGGGGCGAGCTTAGCAAACAGTTTGTCTGCTT...ACTTCCAGCCCCCTGGACATTCGGGTACAAGAGACTCAGGTCGGGCAAGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAAAGAGGGACCTGGGGTTaGAAGGGCCCTTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CHMSILSILGLTQETPSKRGTWG*KGPSQS Trigger: ACTTTGGGAAGGGCCCTTCAAACCCCAGGTCCCTCT...TTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | GCTAATTTTGAGAGCAATGATGGGGAACAGGGAGACATTTCATGGACAATGGAAGGGCAGCGGCCCGTGTaGCATGGCAGCCACGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANFESNDGEQGDISWTMEGQRPV*HGSHAS Trigger: GCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCC...TTCCATTGTCCATGAAATGTCTCCCTGTTCCCCATCATTGCTCTCAAAATTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | TACAAATATCTGGTCGAGTTAGCCTGTGAAGTCCTTGAAGGCAGAGGTGGCACAGAGAGACTCAGAGCGTaGCCGGGGCGTCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YKYLVELACEVLEGRGGTERLRA*PGRLHP Trigger: TGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTC...TGTGCCACCTCTGCCTTCAAGGACTTCACAGGCTAACTCGACCAGATATTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062028.8 |
||
| CDS TCA 90 bp | GTCGGACATGATGATGTCGCTGGTGAGTTGCTGCTCCAGGAACTCTaGGGTCTCCTCAGCAATCTGGCCTGGGATTCGAAAGTCAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGHDDVAGELLLQEL*GLLSNLAWDSKVNN Trigger: GTTGTTGACTTTCGAATCCCAGGCCAGATTGCTGAGGAGACCTCAGAGTTCCTGGAGCAGCAACTCACCAGCGACATCATCATGTCCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 90 bp | AGCGGCATGAGGGTCAGGGCAGCCAGCAGGTCCACCAGACAAAGATaGAAGACAAAAACAAATTTTCGGAGGGCGGGTGTCTTGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: SGMRVRAASRSTRQR*KTKTNFRRAGVLAI Trigger: TATTGCCAAGACACCCGCCCTCCGAAAATTTGTTTTTGTCTTCCATCTTTGTCTGGTGGACCTGCTGGCTGCCCTGACCCTCATGCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | TCTCACCATACCCAGGTTCCCTCCCCCAATAGTCAAAGATCCCAGCCAAGTCCAGCACCTCGTAGCGCATaGGGTGGACCACATAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHHTQVPSPNSQRSQPSPAPRSA*GGPHNS Trigger: ACTATTATGTGGTCCACCCAATGCGCTACGAGGTGC...TGGACTTGGCTGGGATCTTTGACTATTGGGGGAGGGAACCTGGGTATGGTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACATGTCCATCCTGTCGATTCTGGGCCTGACCCAGGAAACACCAAGCAAAAAGCAGACAAACTGTTaGCTAAGCTCGCCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CHMSILSILGLTQETPSKKQTNC*LSSPRI Trigger: GATCCGGGGCGAGCTTAGCAAACAGTTTGTCTGCTT...TTTGCTTGGTGTTTCCTGGGTCAGGCCCAGAATCGACAGGATGGACATGTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 90 bp | AGTAGCCAATCCAGGTTACCACGTTCTCCACCTGTCCTGCTGAAATaGGCTGTGCGCTCAGGGCAACATAGAGATGGAAAGAGAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQSRLPRSPPVLLK*AVRSGQHRDGKRSR Trigger: CCTACTTCTCTTTCCATCTCTATGTTGCCCTGAGCGCACAGCCCATTTCAGCAGGACAGGTGGAGAACGTGGTAACCTGGATTGGCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS TCA 90 bp | GCAAAAGTAGCCAATCCAGGTTACCACGTTCTCCACCTGTCCTGCTaGAATGGGCTGTGCGCTCAGGGCAACATAGAGATGGAAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKVANPGYHVLHLSC*NGLCAQGNIEMERE Trigger: TTCTCTTTCCATCTCTATGTTGCCCTGAGCGCACAGCCCATTTCAGCAGGACAGGTGGAGAACGTGGTAACCTGGATTGGCTACTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | AAACCTGTCCAGCTTGCAATTAATCCCTTTCCGCTGAAAATACCATTGCTGATAAGAGGGACCTGGGGTTaGAAGGGCCCTTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KPVQLAINPFPLKIPLLIRGTWG*KGPSQS Trigger: ACTTTGGGAAGGGCCCTTCAAACCCCAGGTCCCTCT...TATCAGCAATGGTATTTTCAGCGGAAAGGGATTAATTGCAAGCTGGACAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGCAGCAAGGCGCACCTCGTAGCGCATaGGGTGGACCACATAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLILTNTAPIVLINKQQGAPRSA*GGPHNS Trigger: ACTATTATGTGGTCCACCCAATGCGCTACGAGGTGC...GCCTTGCTGCTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS-3UTR CAA 90 bp | AAAATACCATTGCTGATACTAACCAACACAGCCCCTATAGTCTTAATCAATAAGGAGAGACTCAGAGCGTaGCCGGGGCGTCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KIPLLILTNTAPIVLINKERLRA*PGRLHP Trigger: TGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTC...CTTATTGATTAAGACTATAGGGGCTGTGTTGGTTAGTATCAGCAATGGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CCA 72 bp | GAGACTCAGAGCGTTGCCGGGGCGTCTCCATCCACGTaGGCAGCGGCCCGTGTTGCATGGCAGCCACGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ETQSVAGASPST*AAARVAWQPRE Trigger: CTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS GCA 72 bp | CGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTTaGATGGCAGCCACGCGAGCCACTCGAAACATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGVSIHVGSGPC*MAATRATRNML Trigger: CAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
||
| CDS CAA 72 bp | CCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTaGCATGGCAGCCACGCGAGCCACTCGAAACATGCT | + |
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Preference number: 6 (lower is better) Translates to: PGRLHPRGQRPV*HGSHASHSKHA Trigger: AGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CAA 90 bp | AGAGCGTTGCCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTaGCATGGCAGCCACGCGAGCCACTCGAAACATGCTGCAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: RALPGRLHPRGQRPV*HGSHASHSKHAAVD Trigger: GTCTACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS GCA 72 bp | ACCATAGTAGAGCGGCTACTGAGAGACTCAGAGCGTTaGCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TIVERLLRDSER*RGVSIHVGSGP Trigger: CGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTCAGTAGCCGCTCTACTATGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CCA 72 bp | GCGTCTCCATCCACGTGGGCAGCGGCCCGTGTTGCATaGCAGCCACGCGAGCCACTCGAAACATGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASPSTWAAARVA*QPREPLETCCS Trigger: ACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CCA 72 bp | GACCACTGCTGCCTTCCCACCCCCAAACGTCCGGTGTaGGGTGGTCTGGTGAGCCCCGGAGCTGGTAACCAT | + |
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Preference number: 6 (lower is better) Translates to: DHCCLPTPKRPV*GGLVSPGAGNH Trigger: ATGGTTACCAGCTCCGGGGCTCACCAGACCACCCCACACCGGACGTTTGGGGGTGGGAAGGCAGCAGTGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CAA 72 bp | AACCATAGTAGAGCGGCTACTGAGAGACTCAGAGCGTaGCCGGGGCGTCTCCATCCACGTGGGCAGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NHSRAATERLRA*PGRLHPRGQRP Trigger: GGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTCAGTAGCCGCTCTACTATGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CAA 90 bp | GGAGCTGGTAACCATAGTAGAGCGGCTACTGAGAGACTCAGAGCGTaGCCGGGGCGTCTCCATCCACGTGGGCAGCGGCCCGTGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: GAGNHSRAATERLRA*PGRLHPRGQRPVLH Trigger: ATGCAACACGGGCCGCTGCCCACGTGGATGGAGACGCCCCGGCAACGCTCTGAGTCTCTCAGTAGCCGCTCTACTATGGTTACCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS GCA 72 bp | CGCCCACCAGCACGGAGGCCACCAGCCCTAGTGTCATaGGCACCTCGTAGCGCATTGGGTGGACCACATAAT | + |
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Preference number: 6 (lower is better) Translates to: RPPARRPPALVS*APRSALGGPHN Trigger: ATTATGTGGTCCACCCAATGCGCTACGAGGTGCGCATGACACTAGGGCTGGTGGCCTCCGTGCTGGTGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS GCA 72 bp | GTTGCATGGCAGCCACGCGAGCCACTCGAAACATGCTaGAGTAGACCACAAAGATCAGGATCAAGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VAWQPREPLETC*SRPQRSGSRAA Trigger: TGCTGCCCTTGATCCTGATCTTTGTGGTCTACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS GCA 72 bp | CGTGTTGCATGGCAGCCACGCGAGCCACTCGAAACATaGTGCAGTAGACCACAAAGATCAGGATCAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RVAWQPREPLET*CSRPQRSGSRA Trigger: TGCCCTTGATCCTGATCTTTGTGGTCTACTGCAGCATGTTTCGAGTGGCTCGCGTGGCTGCCATGCAACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CAA 72 bp | CACCACAAAAAGCTGGCAGTAGGCACTATGGCTCCATaGGAGAGAACAGCCGGGGTTAACACTGGGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: HHKKLAVGTMAP*ERTAGVNTGSS Trigger: GGAGCTCCCAGTGTTAACCCCGGCTGTTCTCTCCAATGGAGCCATAGTGCCTACTGCCAGCTTTTTGTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CAA 90 bp | AGCAAAGACCACCACAAAAAGCTGGCAGTAGGCACTATGGCTCCATaGGAGAGAACAGCCGGGGTTAACACTGGGAGCTCCTTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SKDHHKKLAVGTMAP*ERTAGVNTGSSFLP Trigger: TGGGAGGAAGGAGCTCCCAGTGTTAACCCCGGCTGTTCTCTCCAATGGAGCCATAGTGCCTACTGCCAGCTTTTTGTGGTGGTCTTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS TCA 72 bp | GATGATGTCGCTGGTGAGTTGCTGCTCCAGGAACTCTaGGGTCTCCTCAGCAATCTGGCCTGGGATTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: DDVAGELLLQEL*GLLSNLAWDSK Trigger: TTTCGAATCCCAGGCCAGATTGCTGAGGAGACCTCAGAGTTCCTGGAGCAGCAACTCACCAGCGACATCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS GCA 72 bp | CTCACGACTAGGCAGCCTCAGCTCCTCCTCTGGAGCTaGCTTGAAGAAGCAGACAAACTGTTTGCTAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LTTRQPQLLLWS*LEEADKLFAKL Trigger: GAGCTTAGCAAACAGTTTGTCTGCTTCTTCAAGGCAGCTCCAGAGGAGGAGCTGAGGCTGCCTAGTCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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| CDS CCA 72 bp | AGGGTCAGGGCAGCCAGCAGGTCCACCAGACAAAGATaGAAGACAAAAACAAATTTTCGGAGGGCGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RVRAASRSTRQR*KTKTNFRRAGV Trigger: GACACCCGCCCTCCGAAAATTTGTTTTTGTCTTCCATCTTTGTCTGGTGGACCTGCTGGCTGCCCTGACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062028.8 ENSMUST00000116284.2 |
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