Pregenerated sensors for GPR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046922Ensembl transcript IDs: ENSMUST00000061796.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTaGCACCTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAA | + |
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Preference number: 1 (lower is better) Translates to: FTFSPFAPAESDLHH*HLKSSSAGTLTLTK Trigger: TTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR GCA 90 bp | GCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTaGTCCAGCAGAGTCAGATTTGCACCACTGACACCTCAAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ASLSESVRCVHVQSL*SSRVRFAPLTPQEF Trigger: GAACTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR GCA 90 bp | GTATATGTAAAATGCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTaGGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCA | + |
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Preference number: 1 (lower is better) Translates to: VYVKCQQASLSESVR*VHVQSLCSSRVRFA Trigger: TGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTACATATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR TCA 90 bp | ACATGTATACACTGTATATGTAAAATGCCAACAAGCCTCTTTGTCTaGGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCTCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: TCIHCICKMPTSLFV*VSSLRSRSVPLLQQ Trigger: CTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTACATATACAGTGTATACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR CCA 90 bp | CTTGACAAATGTGATGTACGATTGAGTATACAACCACATTTTGTTTaGTTTTCACAGAACAGGAAGCTCCAGGTCCTGAACACCTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LDKCDVRLSIQPHFV*FSQNRKLQVLNTSE Trigger: TTCTGAGGTGTTCAGGACCTGGAGCTTCCTGTTCTGTGAAAACCAAACAAAATGTGGTTGTATACTCAATCGTACATCACATTTGTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTCATCAGCAGGCACCTTaGCGCTCACCAAAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: ANKPLCLSQFVAFTFSPFHQQAP*RSPKAG Trigger: GCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCTGATG...AAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCTCAAGAGACGCTCACCAAAGGCTaGCATGTTGGGTTTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VQSLCSSRVRFAPLTPQETLTKG*HVGFVV Trigger: CACCACAAACCCAACATGCCAGCCTTTGGTGAGCGT...CTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCTCAAGAGCAAAGGCTGGCATGTTaGGTTTGTGGTGTTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VQSLCSSRVRFAPLTPQEQRLAC*VCGVCE Trigger: CTCACAAACACCACAAACCCAACATGCCAGCCTTTG...CTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR TCA 90 bp | TTCACAGAACAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTTGGGTTTGTGGTGTTTGTaGGGGAACACGAGGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FTEQEAPGPEHLRRYKDLGLWCL*GNTRSP Trigger: AGGGCTCCTCGTGTTCCCTCACAAACACCACAAACC...CAAATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTGTTCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR GCA 90 bp | ATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGCAACACTGTCTTGGCCAGCAGAGTCAGATTTaGACCACTGACACCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IHLRLPFSCSWGWQHCLGQQSQI*TTDTSR Trigger: TCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTG...GCCAAGACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGCAACACTGTCAACCACATTTTGTTTaGTTTTCACAGAACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TKIHLRLPFSCSWGWQHCQPHFV*FSQNRK Trigger: CTTCCTGTTCTGTGAAAACCAAACAAAATGTGGTTG...ACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTATTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR CAA 90 bp | TTAAGCAGTATTGGAATGTCTTCACTTGACAAATGTGATGTACGATaGAGTATACAACCACATTTTGTTTGGTTTTCACAGAACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSSIGMSSLDKCDVR*SIQPHFVWFSQNRK Trigger: CTTCCTGTTCTGTGAAAACCAAACAAAATGTGGTTGTATACTCAATCGTACATCACATTTGTCAAGTGAAGACATTCCAATACTGCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR CCA 72 bp | AGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTaGGTTTGTGGTGTTTGTGAGGGAACACGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SRHLDAHQRLAC*VCGVCEGTRGA Trigger: GGCTCCTCGTGTTCCCTCACAAACACCACAAACCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR TCA 72 bp | ACCACTGACACCTCAAGAGTTCATCAGCAGGCACCTTaGCGCTCACCAAAGGCTGGCATGTTGGGTTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TTDTSRVHQQAP*RSPKAGMLGLW Trigger: CCACAAACCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAGGTGTCAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR TCA 72 bp | AGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTaGCACCTCAAGAGTTCATCAGCAGGCACCTTGACG | + |
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Preference number: 3 (lower is better) Translates to: SPFAPAESDLHH*HLKSSSAGTLT Trigger: CGTCAAGGTGCCTGCTGATGAACTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR GCA 72 bp | TCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTaGTCCAGCAGAGTCAGATTTGCACCACTGACACCT | + |
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Preference number: 3 (lower is better) Translates to: SESVRCVHVQSL*SSRVRFAPLTP Trigger: AGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR GCA 72 bp | AAATGCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTaGGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: KCQQASLSESVR*VHVQSLCSSRV Trigger: GACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCACAGAACAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTTCACGTTCAGTCCCTTaGCTCCAGCAGAGTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: FSQNRKLQVLNTSEDTKISRSVP*LQQSQI Trigger: AATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGA...AATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTGTTCTGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR CCA 72 bp | ACAAAAATACATCTTAGACTCCCTTTCTCCTGCTCTTaGGGATGGCAACACTGTCTTGGCATTTCAGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TKIHLRLPFSCS*GWQHCLGISAA Trigger: AGCTGCTGAAATGCCAAGACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTATTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CAA 90 bp | ATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGCAACACTGTCTTGGCACAACCACATTTTGTTaGGTTTTCACAGAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: IHLRLPFSCSWGWQHCLGTTTFC*VFTEQE Trigger: TTCCTGTTCTGTGAAAACCAAACAAAATGTGGTTGT...GCCAAGACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR TCA 72 bp | CACTGTATATGTAAAATGCCAACAAGCCTCTTTGTCTaGGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: HCICKMPTSLFV*VSSLRSRSVPL Trigger: CAAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTACATATACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR-3UTR CAA 90 bp | GATGTACGATTGAGTATACAACCACATTTTGTTTGGTTTTCACAGAACAGGAAGTGCCAACAAGCCTCTTaGTCTGAGTCAGTTCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: DVRLSIQPHFVWFSQNRKCQQAS*SESVRC Trigger: GCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCA...CTTCCTGTTCTGTGAAAACCAAACAAAATGTGGTTGTATACTCAATCGTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | CTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTGGGTTCGCCGGTGTCCGGTaGCCCTGCTGCTGTAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LKSSSAGTLTLTKGWHVGFAGVR*PCCCSR Trigger: GCGGCTACAGCAGCAGGGGCACCGGACACCGGCGAA...CCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR TCA 90 bp | CGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCCGGGAGTGGACGCGATaGGCGCCACCACCAGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: RSRSVPLLQQSQICTTDTREWTR*APPPAH Trigger: ATGCGCTGGTGGTGGCGCTCATCGCGTCCACTCCCG...GGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR TCA 90 bp | CTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTGGGGGCCCTGCTGGCAGCTaGGAAGACAGCTCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LKSSSAGTLTLTKGWHVGGPAGS*EDSSSD Trigger: GTCACTGGAGCTGTCTTCTCAGCTGCCAGCAGGGCC...CCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | GTAAAATGCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGGCCGCCTCCCAGCGCTaGGGATGCTGCTGGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKCQQASLSESVRCVHVQAASQR*GCCWGS Trigger: GGACCCCCAGCAGCATCCGCAGCGCTGGGAGGCGGC...CTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCGATCTGGTGGGCGTaGCGCCAGACCACCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ANKPLCLSQFVAFTFSPFAIWWA*RQTTWQ Trigger: CTGCCAGGTGGTCTGGCGCCACGCCCACCAGATCGC...AAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTGGGTTTGTGGTGTTTGTTGCAAAGCGATCTGGTaGGCGTGGCGCCAGACCACC | + |
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Preference number: 4 (lower is better) Translates to: SRHLDAHQRLACWVCGVCCKAIW*AWRQTT Trigger: GGTGGTCTGGCGCCACGCCCACCAGATCGCTTTGCA...ACAAACACCACAAACCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCTCAAGAGAGAAGACAGCTCCAGTaGCCCGTTAGGTCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VQSLCSSRVRFAPLTPQERRQLQ*PVRSAA Trigger: GGCGGCGGACCTAACGGGTCACTGGAGCTGTCTTCT...CTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GCACCACTGACACCTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAAGGGGGACACTGTCCAGGTaGCTGCTAGCAAGAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: APLTPQEFISRHLDAHQRGTLSR*LLARGA Trigger: TGCACCTCTTGCTAGCAGCCACCTGGACAGTGTCCC...CCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAGGTGTCAGTGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGAGAGCAACGCCACATaGCTGCGTGTCAGGGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ANKPLCLSQFVAFTFSPFESNAT*LRVRGR Trigger: GCGCCCCCTGACACGCAGCCATGTGGCGTTGCTCTC...AAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | CGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCCGAAGGGCAGCCAGCTaGCCCCAAAAGTGCCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: RSRSVPLLQQSQICTTDTRRAAS*PQKCLA Trigger: TGCTAGGCACTTTTGGGGCCAGCTGGCTGCCCTTCG...GGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCACTGACACCTCAAGAGTGGCGCCAGACCACCTaGCAGATGCGCACGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: VQSLCSSRVRFAPLTPQEWRQTT*QMRTYK Trigger: CTTGTACGTGCGCATCTGCCAGGTGGTCTGGCGCCA...CTCTTGAGGTGTCAGTGGTGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | AGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTGGGTTTGTGGTGTTTGTCCACCACACAATAGATaGCGAAGGGCAGCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRHLDAHQRLACWVCGVCPPHNR*RRAASW Trigger: CCAGCTGGCTGCCCTTCGCCATCTATTGTGTGGTGG...ACAAACACCACAAACCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCTCACTGGGGGACCTaGAGCGGAAGGGCACTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVRCVHVQSLCSSRVRFAPHWGT*SGRALW Trigger: CCAAAGTGCCCTTCCGCTCCAGGTCCCCCAGTGAGG...TGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | GTAAAATGCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGGCTGCTAGCAAGAGGTaGACGCCCAACAGGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VKCQQASLSESVRCVHVQAASKR*TPNRVR Trigger: CCGGACCCTGTTGGGCGTGCACCTCTTGCTAGCAGC...CTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCACCAACAGGTCAGCAGTaGCCAGACTACCCACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SVRCVHVQSLCSSRVRFAPTGQQ*PDYPRA Trigger: TGCTCGTGGGTAGTCTGGCCACTGCTGACCTGTTGG...TGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GCACCACTGACACCTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAAGGAGCGGAAGGGCACTTTaGATTGGAAACAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: APLTPQEFISRHLDAHQRSGRAL*IGNSHR Trigger: TCTGTGGCTGTTTCCAATCCAAAGTGCCCTTCCGCT...CCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAGGTGTCAGTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR TCA 90 bp | ATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGCAACACTGTCTTGGCACACGAAGTGTAAGATaGGGCCACAGCCCGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: IHLRLPFSCSWGWQHCLGTRSVR*GHSPPT Trigger: TGTTGGCGGGCTGTGGCCTCATCTTACACTTCGTGT...GCCAAGACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | TCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCAGCTAGGCAATGCTGTTaGAAAGCGATCTGGTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SVRCVHVQSLCSSRVRFAARQCC*KAIWWA Trigger: CGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGC...TGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | ACAAAAATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGCAACACTGTTCCCGAGGGCCCTGCTaGCAGCTGAGAAGACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TKIHLRLPFSCSWGWQHCSRGPC*QLRRQL Trigger: GAGCTGTCTTCTCAGCTGCCAGCAGGGCCCTCGGGA...ACAGTGTTGCCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTATTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | TTTTCACAGAACAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTCCACGAGCACAAACATaGGCGTGCGCAGCGCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FSQNRKLQVLNTSEDTKIPRAQT*ACAARE Trigger: CTCCCGCGCTGCGCACGCCCATGTTTGTGCTCGTGG...AATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTGTTCTGTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | CTCAAGAGTTCATCAGCAGGCACCTTGACGCTCACCAAAGGCTGGCATGTTGGGAAGGGCACTTTGGATTaGAAACAGCCACAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LKSSSAGTLTLTKGWHVGKGTLD*KQPQNR Trigger: CCTGTTCTGTGGCTGTTTCCAATCCAAAGTGCCCTT...CCCAACATGCCAGCCTTTGGTGAGCGTCAAGGTGCCTGCTGATGAACTCTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR TCA 90 bp | TTTTCACAGAACAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTCCAGGAAGCCCACCATaGGCAGGCTCACAGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FSQNRKLQVLNTSEDTKIPGSPP*AGSQSP Trigger: CGGAGACTGTGAGCCTGCTCATGGTGGGCTTCCTGG...AATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTGTTCTGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | GCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGTCCCTTTTGGCATAAGTGTAGATaGCCGGGTCCTCTTGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: ANKPLCLSQFVAFTFSPFWHKCR*PGPLGY Trigger: GTAGCCAAGAGGACCCGGCCATCTACACTTATGCCA...AAAGGGACTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CCA 90 bp | TCACATACAACAAAAATACATCTTAGACTCCCTTTCTCCTGCTCTTGGGGATGGAGCCACAAGGCACGCTaGATCTCCTGGTTGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SHTTKIHLRLPFSCSWGWSHKAR*ISWLRK Trigger: CTTCCGCAACCAGGAGATCCAGCGTGCCTTGTGGCT...CCATCCCCAAGAGCAGGAGAAAGGGAGTCTAAGATGTATTTTTGTTGTATGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | GGAATGTCTTCACTTGACAAATGTGATGTACGATTGAGTATACAACCACATTTTGCACAAACATGGGCGTaGGCAGCGCGGGAGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: GMSSLDKCDVRLSIQPHFAQTWA*AAREWT Trigger: CGTCCACTCCCGCGCTGCGCACGCCCATGTTTGTGC...AAAATGTGGTTGTATACTCAATCGTACATCACATTTGTCAAGTGAAGACATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | GTAAAATGCCAACAAGCCTCTTTGTCTGAGTCAGTTCGTTGCGTTCACGTTCAGATGCGCACGTACAAGTaGAGCATGATGCCAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: VKCQQASLSESVRCVHVQMRTYK*SMMPKT Trigger: GGTCTTTGGCATCATGCTGCACTTGTACGTGCGCAT...CTGAACGTGAACGCAACGAACTGACTCAGACAAAGAGGCTTGTTGGCATTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTTGTATATATATAGACCACCTGGCAGATaGGCACGTACAAGTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QEAPGPEHLRRYKDLYIYRPPGR*ARTSAA Trigger: TGCTGCACTTGTACGTGCGCATCTGCCAGGTGGTCT...ATATATATACAAATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| 3UTR CAA 72 bp | ATTGGAATGTCTTCACTTGACAAATGTGATGTACGATaGAGTATACAACCACATTTTGTTTGGTTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: IGMSSLDKCDVR*SIQPHFVWFSQ Trigger: CTGTGAAAACCAAACAAAATGTGGTTGTATACTCAATCGTACATCACATTTGTCAAGTGAAGACATTCCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 90 bp | CAGCGCTGCGGATGCTGCTGGGGGTCCCCATTCGCCGGTGTCCGGTaGCCCTGCTGCTGTAGCCGCAGCTGCCGCTCCCTCGGCCGCTAC | + |
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Preference number: 5 (lower is better) Translates to: QRCGCCWGSPFAGVR*PCCCSRSCRSLGRY Trigger: GTAGCGGCCGAGGGAGCGGCAGCTGCGGCTACAGCAGCAGGGGCACCGGACACCGGCGAATGGGGACCCCCAGCAGCATCCGCAGCGCTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 90 bp | TGCCCCTGCTGCTGTAGCCGCAGCTGCCGCTCCCTCGGCCGCTACTaGCACCACTTGGGACTCGTTGAGCGCGGCGGCGCTAGCGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: CPCCCSRSCRSLGRY*HHLGLVERGGASVH Trigger: ATGAACGCTAGCGCCGCCGCGCTCAACGAGTCCCAAGTGGTGGCAGTAGCGGCCGAGGGAGCGGCAGCTGCGGCTACAGCAGCAGGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 90 bp | TCCCCATTCGCCGGTGTCCGGTGCCCCTGCTGCTGTAGCCGCAGCTaGCGCTCCCTCGGCCGCTACTGCCACCACTTGGGACTCGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SPFAGVRCPCCCSRS*RSLGRYCHHLGLVE Trigger: CTCAACGAGTCCCAAGTGGTGGCAGTAGCGGCCGAGGGAGCGGCAGCTGCGGCTACAGCAGCAGGGGCACCGGACACCGGCGAATGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 90 bp | GGATTCACTGCCGAAAGCAGTAGTCCCGAGGGCCCTGCTGGCAGCTaGGAAGACAGCTCCAGTGACCCGTTAGGTCCGCCGCCGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GFTAESSSPEGPAGS*EDSSSDPLGPPPPP Trigger: GGGAGGCGGCGGCGGACCTAACGGGTCACTGGAGCTGTCTTCTCAGCTGCCAGCAGGGCCCTCGGGACTACTGCTTTCGGCAGTGAATCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 90 bp | CCACGAGCACAAACATGGGCGTGCGCAGCGCGGGAGTGGACGCGATaGGCGCCACCACCAGCGCATTTTCGCCTGCGATCACAGTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: PRAQTWACAAREWTR*APPPAHFRLRSQFP Trigger: CGGGAACTGTGATCGCAGGCGAAAATGCGCTGGTGGTGGCGCTCATCGCGTCCACTCCCGCGCTGCGCACGCCCATGTTTGTGCTCGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | AGCCTAGAACAGGCAGCAACCCCAACCCGAGGGACACTGTCCAGGTaGCTGCTAGCAAGAGGTGCACGCCCAACAGGGTCCGGCGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: SLEQAATPTRGTLSR*LLARGARPTGSGAS Trigger: ACTCGCGCCGGACCCTGTTGGGCGTGCACCTCTTGCTAGCAGCCACCTGGACAGTGTCCCTCGGGTTGGGGTTGCTGCCTGTTCTAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 90 bp | CCCACTCCCTTTCTGGTGGCTGCTAAGTGGGGCGGTGCTAGGCAATaGTGTTGCAAAGCGATCTGGTGGGCGTGGCGCCAGACCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PTPFLVAAKWGGARQ*CCKAIWWAWRQTTW Trigger: CCAGGTGGTCTGGCGCCACGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAAGGGAGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | TGGGGCGGTGCTAGGCAATGCTGTTGCAAAGCGATCTGGTGGGCGTaGCGCCAGACCACCTGGCAGATGCGCACGTACAAGTGCAGCATG | + |
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Preference number: 5 (lower is better) Translates to: WGGARQCCCKAIWWA*RQTTWQMRTYKCSM Trigger: CATGCTGCACTTGTACGTGCGCATCTGCCAGGTGGTCTGGCGCCACGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGCACCGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | ATGATGCCAAAGACCACGAAGAAGGAAGTAGAGAGCAACGCCACATaGCTGCGTGTCAGGGGGCGCACCACGCTGCAGGACGTGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: MMPKTTKKEVESNAT*LRVRGRTTLQDVRS Trigger: CGACCGCACGTCCTGCAGCGTGGTGCGCCCCCTGACACGCAGCCATGTGGCGTTGCTCTCTACTTCCTTCTTCGTGGTCTTTGGCATCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | AGCACCACGGCCAAAGTTCCCACTCCCTTTCTGGTGGCTGCTAAGTaGGGCGGTGCTAGGCAATGCTGTTGCAAAGCGATCTGGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: STTAKVPTPFLVAAK*GGARQCCCKAIWWA Trigger: CGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAAGGGAGTGGGAACTTTGGCCGTGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | AAGTGTAGATGGCCGGGTCCTCTTGGCTACCCACCACACAATAGATaGCGAAGGGCAGCCAGCTGGCCCCAAAAGTGCCTAGCACCACGG | + |
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Preference number: 5 (lower is better) Translates to: KCRWPGPLGYPPHNR*RRAASWPQKCLAPR Trigger: CCGTGGTGCTAGGCACTTTTGGGGCCAGCTGGCTGCCCTTCGCCATCTATTGTGTGGTGGGTAGCCAAGAGGACCCGGCCATCTACACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 90 bp | TCACAGTCTCCGAGGGCACCACGTACTGGAACACGAAGTGTAAGATaGGGCCACAGCCCGCCAACAGGTCAGCAGTGGCCAGACTACCCA | + |
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Preference number: 5 (lower is better) Translates to: SQSPRAPRTGTRSVR*GHSPPTGQQWPDYP Trigger: TGGGTAGTCTGGCCACTGCTGACCTGTTGGCGGGCTGTGGCCTCATCTTACACTTCGTGTTCCAGTACGTGGTGCCCTCGGAGACTGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | AAGCCCACCATGAGCAGGCTCACAGTCTCCGAGGGCACCACGTACTaGAACACGAAGTGTAAGATGAGGCCACAGCCCGCCAACAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KPTMSRLTVSEGTTY*NTKCKMRPQPANRS Trigger: TGACCTGTTGGCGGGCTGTGGCCTCATCTTACACTTCGTGTTCCAGTACGTGGTGCCCTCGGAGACTGTGAGCCTGCTCATGGTGGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 90 bp | CAAAAGTGCCTAGCACCACGGCCAAAGTTCCCACTCCCTTTCTGGTaGCTGCTAAGTGGGGCGGTGCTAGGCAATGCTGTTGCAAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: QKCLAPRPKFPLPFW*LLSGAVLGNAVAKR Trigger: TCGCTTTGCAACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAAGGGAGTGGGAACTTTGGCCGTGGTGCTAGGCACTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CAA 90 bp | TCAGTTCGTTGCGTTCACGTTCAGTCCCTTTGCTCCAGCAGAGTCAGATTTGCAGATGGCCGGGTCCTCTaGGCTACCCACCACACAATA | + |
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Preference number: 5 (lower is better) Translates to: SVRCVHVQSLCSSRVRFADGRVL*ATHHTI Trigger: TATTGTGTGGTGGGTAGCCAAGAGGACCCGGCCATC...TGCAAATCTGACTCTGCTGGAGCAAAGGGACTGAACGTGAACGCAACGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCTCCAGGTCCTGAACACCTCAGAAGATACAAAGATTTGTATATATATGAGCGGAAGGGCACTTaGGATTGGAAACAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: QEAPGPEHLRRYKDLYIYERKGT*DWKQPQ Trigger: CTGTGGCTGTTTCCAATCCAAAGTGCCCTTCCGCTC...ATATATATACAAATCTTTGTATCTTCTGAGGTGTTCAGGACCTGGAGCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | GTTAGGTCCGCCGCCGCCTCCCAGCGCTGCGGATGCTaGTGGGGGTCCCCATTCGCCGGTGTCCGGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: VRSAAASQRCGC*WGSPFAGVRCP Trigger: GGGGCACCGGACACCGGCGAATGGGGACCCCCAGCAGCATCCGCAGCGCTGGGAGGCGGCGGCGGACCTAAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | CCCGTTAGGTCCGCCGCCGCCTCCCAGCGCTGCGGATaGTGCTGGGGGTCCCCATTCGCCGGTGTCCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PVRSAAASQRCG*CWGSPFAGVRC Trigger: GCACCGGACACCGGCGAATGGGGACCCCCAGCAGCATCCGCAGCGCTGGGAGGCGGCGGCGGACCTAACGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | GCCGGTGTCCGGTGCCCCTGCTGCTGTAGCCGCAGCTaGCGCTCCCTCGGCCGCTACTGCCACCACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: AGVRCPCCCSRS*RSLGRYCHHLG Trigger: TCCCAAGTGGTGGCAGTAGCGGCCGAGGGAGCGGCAGCTGCGGCTACAGCAGCAGGGGCACCGGACACCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | GGATGCTGCTGGGGGTCCCCATTCGCCGGTGTCCGGTaGCCCTGCTGCTGTAGCCGCAGCTGCCGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GCCWGSPFAGVR*PCCCSRSCRSL Trigger: GAGGGAGCGGCAGCTGCGGCTACAGCAGCAGGGGCACCGGACACCGGCGAATGGGGACCCCCAGCAGCATCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 72 bp | CGAGGGCCCTGCTGGCAGCTGAGAAGACAGCTCCAGTaGCCCGTTAGGTCCGCCGCCGCCTCCCAGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGPCWQLRRQLQ*PVRSAAASQRC Trigger: GCAGCGCTGGGAGGCGGCGGCGGACCTAACGGGTCACTGGAGCTGTCTTCTCAGCTGCCAGCAGGGCCCTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | GGCTGCGTGTCAGGGGGCGCACCACGCTGCAGGACGTaGGGTCGGCCAAGCAGTTCCAGCCTAGAACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GCVSGGAPRCRT*GRPSSSSLEQA Trigger: TGCCTGTTCTAGGCTGGAACTGCTTGGCCGACCGCACGTCCTGCAGCGTGGTGCGCCCCCTGACACGCAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | ACGCCACATGGCTGCGTGTCAGGGGGCGCACCACGCTaGAGGACGTGCGGTCGGCCAAGCAGTTCCAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: TPHGCVSGGAPR*RTCGRPSSSSL Trigger: TAGGCTGGAACTGCTTGGCCGACCGCACGTCCTGCAGCGTGGTGCGCCCCCTGACACGCAGCCATGTGGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 72 bp | CAAACATGGGCGTGCGCAGCGCGGGAGTGGACGCGATaGGCGCCACCACCAGCGCATTTTCGCCTGCGATCA | + |
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Preference number: 6 (lower is better) Translates to: QTWACAAREWTR*APPPAHFRLRS Trigger: TGATCGCAGGCGAAAATGCGCTGGTGGTGGCGCTCATCGCGTCCACTCCCGCGCTGCGCACGCCCATGTTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | CAGGCAGCAACCCCAACCCGAGGGACACTGTCCAGGTaGCTGCTAGCAAGAGGTGCACGCCCAACAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QAATPTRGTLSR*LLARGARPTGS Trigger: GGACCCTGTTGGGCGTGCACCTCTTGCTAGCAGCCACCTGGACAGTGTCCCTCGGGTTGGGGTTGCTGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 72 bp | CTGAGGCGGCAAAGGACGCCACCAGGAAGCCCACCATaGGCAGGCTCACAGTCTCCGAGGGCACCACGTACT | + |
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Preference number: 6 (lower is better) Translates to: LRRQRTPPGSPP*AGSQSPRAPRT Trigger: AGTACGTGGTGCCCTCGGAGACTGTGAGCCTGCTCATGGTGGGCTTCCTGGTGGCGTCCTTTGCCGCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | GGACGCGATGAGCGCCACCACCAGCGCATTTTCGCCTaGGATCACAGTTCCCGACACGCACAGCAGCACATC | + |
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Preference number: 6 (lower is better) Translates to: GRDERHHQRIFA*DHSSRHAQQHI Trigger: GATGTGCTGCTGTGCGTGTCGGGAACTGTGATCGCAGGCGAAAATGCGCTGGTGGTGGCGCTCATCGCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CAA 90 bp | GGTGGCAGGCAACAGGGTGGCATAAGTGTAGATGGCCGGGTCCTCTaGGCTACCCACCACACAATAGATGGCGAAGGGCAGCCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGRQQGGISVDGRVL*ATHHTIDGEGQPAG Trigger: GCCAGCTGGCTGCCCTTCGCCATCTATTGTGTGGTGGGTAGCCAAGAGGACCCGGCCATCTACACTTATGCCACCCTGTTGCCTGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS GCA 72 bp | TTTCTGGTGGCTGCTAAGTGGGGCGGTGCTAGGCAATaGTGTTGCAAAGCGATCTGGTGGGCGTGGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLVAAKWGGARQ*CCKAIWWAWRQ Trigger: CTGGCGCCACGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | AAGACCACGAAGAAGGAAGTAGAGAGCAACGCCACATaGCTGCGTGTCAGGGGGCGCACCACGCTGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: KTTKKEVESNAT*LRVRGRTTLQD Trigger: GTCCTGCAGCGTGGTGCGCCCCCTGACACGCAGCCATGTGGCGTTGCTCTCTACTTCCTTCTTCGTGGTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | GCTAGGCAATGCTGTTGCAAAGCGATCTGGTGGGCGTaGCGCCAGACCACCTGGCAGATGCGCACGTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARQCCCKAIWWA*RQTTWQMRTYK Trigger: CTTGTACGTGCGCATCTGCCAGGTGGTCTGGCGCCACGCCCACCAGATCGCTTTGCAACAGCATTGCCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS TCA 72 bp | GGTGCACGCCCAACAGGGTCCGGCGCGAGTAGTAGGTaGGCGCGTTGTACAAAGACAGGTAACGGTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: GARPTGSGASSR*ARCTKTGNGQL Trigger: CAGTTGACCGTTACCTGTCTTTGTACAACGCGCTCACCTACTACTCGCGCCGGACCCTGTTGGGCGTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | ATGAGCAGGCTCACAGTCTCCGAGGGCACCACGTACTaGAACACGAAGTGTAAGATGAGGCCACAGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: MSRLTVSEGTTY*NTKCKMRPQPA Trigger: GGCGGGCTGTGGCCTCATCTTACACTTCGTGTTCCAGTACGTGGTGCCCTCGGAGACTGTGAGCCTGCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | CTAGCACCACGGCCAAAGTTCCCACTCCCTTTCTGGTaGCTGCTAAGTGGGGCGGTGCTAGGCAATGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAPRPKFPLPFW*LLSGAVLGNAV Trigger: AACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAAGGGAGTGGGAACTTTGGCCGTGGTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | GCCAAAGTTCCCACTCCCTTTCTGGTGGCTGCTAAGTaGGGCGGTGCTAGGCAATGCTGTTGCAAAGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: AKVPTPFLVAAK*GGARQCCCKAI Trigger: GATCGCTTTGCAACAGCATTGCCTAGCACCGCCCCACTTAGCAGCCACCAGAAAGGGAGTGGGAACTTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CAA 72 bp | CAACAGGGTGGCATAAGTGTAGATGGCCGGGTCCTCTaGGCTACCCACCACACAATAGATGGCGAAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQGGISVDGRVL*ATHHTIDGEGQ Trigger: CTGCCCTTCGCCATCTATTGTGTGGTGGGTAGCCAAGAGGACCCGGCCATCTACACTTATGCCACCCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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| CDS CCA 72 bp | TATAGGTGGCAGGCAACAGGGTGGCATAAGTGTAGATaGCCGGGTCCTCTTGGCTACCCACCACACAATAGA | + |
|
Preference number: 6 (lower is better) Translates to: YRWQATGWHKCR*PGPLGYPPHNR Trigger: TCTATTGTGTGGTGGGTAGCCAAGAGGACCCGGCCATCTACACTTATGCCACCCTGTTGCCTGCCACCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061796.8 |
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