Pregenerated sensors for GPR55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049608Ensembl transcript IDs: ENSMUST00000086975.7
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGCCACCAATGGGTCCCTGGAGGCCCAGCCCTGAGATGGGGCTCTaGTCCTGGTCCTCACTCCCCTACAGCCACTGCCGGTCCTTAACT | + |
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Preference number: 1 (lower is better) Translates to: SPPMGPWRPSPEMGL*SWSSLPYSHCRSLT Trigger: AGTTAAGGACCGGCAGTGGCTGTAGGGGAGTGAGGACCAGGACCAGAGCCCCATCTCAGGGCTGGGCCTCCAGGGACCCATTGGTGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | CCAATGGGTCCCTGGAGGCCCAGCCCTGAGATGGGGCTCTGGTCCTaGTCCTCACTCCCCTACAGCCACTGCCGGTCCTTAACTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PMGPWRPSPEMGLWS*SSLPYSHCRSLTLS Trigger: AGAGAGAGTTAAGGACCGGCAGTGGCTGTAGGGGAGTGAGGACCAGGACCAGAGCCCCATCTCAGGGCTGGGCCTCCAGGGACCCATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | GGGAACCTCATTTCTCAGGTCTGCATAGCCCTGAATCGCCACCAATaGGTCCCTGGAGGCCCAGCCCTGAGATGGGGCTCTGGTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: GNLISQVCIALNRHQ*VPGGPALRWGSGPG Trigger: ACCAGGACCAGAGCCCCATCTCAGGGCTGGGCCTCCAGGGACCCATTGGTGGCGATTCAGGGCTATGCAGACCTGAGAAATGAGGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 90 bp | CCATGGAGAGTGAGGCTTTCAGCTGTCGCTGGGAGCTCCTTCTCCTaGGCCAGAGGAGCCGATGAAGGTTCCCACGCTGGTTCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: PWRVRLSAVAGSSFS*ARGADEGSHAGSAV Trigger: GACAGCTGAACCAGCGTGGGAACCTTCATCGGCTCCTCTGGCTCAGGAGAAGGAGCTCCCAGCGACAGCTGAAAGCCTCACTCTCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 90 bp | TGGGACAAAACAGCATCCAAGGCTGGGAACCTCATTTCTCAGGTCTaGATAGCCCTGAATCGCCACCAATGGGTCCCTGGAGGCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: WDKTASKAGNLISQV*IALNRHQWVPGGPA Trigger: GGCTGGGCCTCCAGGGACCCATTGGTGGCGATTCAGGGCTATGCAGACCTGAGAAATGAGGTTCCCAGCCTTGGATGCTGTTTTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 90 bp | CCTGAGATGGGGCTCTGGTCCTGGTCCTCACTCCCCTACAGCCACTaGCGGTCCTTAACTCTCTCTTCCTTAACTATTCCTTCAGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PEMGLWSWSSLPYSH*RSLTLSSLTIPSGG Trigger: GCCACCTGAAGGAATAGTTAAGGAAGAGAGAGTTAAGGACCGGCAGTGGCTGTAGGGGAGTGAGGACCAGGACCAGAGCCCCATCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 90 bp | AAACCCTATCCCCACCCCCAATCTCCTGGTCCAGGGTCACCAATCTaGGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: KPYPHPQSPGPGSPI*DTAVQLQEPCPYLS Trigger: GGAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGACCCTGGACCAGGAGATTGGGGGTGGGGATAGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 90 bp | AGGTGGCTCCACACTGAACACTGCCACAGCCACCATGCCTGGAAGTaGCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTC | + |
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Preference number: 1 (lower is better) Translates to: RWLHTEHCHSHHAWK*LPFIGFQWSGSARL Trigger: GAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAGTGTGGAGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | TCCTTCAGGTGGCTCCACACTGAACACTGCCACAGCCACCATGCCTaGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SFRWLHTEHCHSHHA*KCLPFIGFQWSGSA Trigger: AGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAGTGTGGAGCCACCTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 90 bp | ACAGTGATCCTCCCCATTTCTGGTACTGCTGAGCCAACTGCCACTTaGGCCACCATTGGACTGGTGACACACACCAGGCAAGTCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TVILPISGTAEPTAT*ATIGLVTHTRQVSF Trigger: GAAGGAGACTTGCCTGGTGTGTGTCACCAGTCCAATGGTGGCTCAAGTGGCAGTTGGCTCAGCAGTACCAGAAATGGGGAGGATCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | CCACTGCCGGTCCTTAACTCTCTCTTCCTTAACTATTCCTTCAGGTaGCTCCACACTGAACACTGCCACAGCCACCATGCCTGGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: PLPVLNSLFLNYSFR*LHTEHCHSHHAWKC Trigger: GCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAGTGTGGAGCCACCTGAAGGAATAGTTAAGGAAGAGAGAGTTAAGGACCGGCAGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | AAGCCTTTGCTCTGGGTCATCTTGCCTGGCAGACACACTTGCACATaGAGGGGACCACTTGACTCTGTTGGATGGGTGAACAGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: KPLLWVILPGRHTCT*RGPLDSVGWVNSSF Trigger: AAAGGAGCTGTTCACCCATCCAACAGAGTCAAGTGGTCCCCTCCATGTGCAAGTGTGTCTGCCAGGCAAGATGACCCAGAGCAAAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 90 bp | CATGTCTCTTTCCTTCCCGGGGTATACTTTACTCCCTTGCTACTCTaGCCCTTTCCACTGTGTCCCCATTGGCTCTGTCATGTCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HVSFLPGVYFTPLLL*PFPLCPHWLCHVSC Trigger: ACAGGAGACATGACAGAGCCAATGGGGACACAGTGGAAAGGGGCAGAGTAGCAAGGGAGTAAAGTATACCCCGGGAAGGAAAGAGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 90 bp | GAGCTGAACCAAGTGAAGACCAGCTCTTCCTCATCCCCTTCATACTaGTGTAATGCACTCCTTCCTAGGCTGTCCAAGTCAGAAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: ELNQVKTSSSSSPSY*CNALLPRLSKSEGW Trigger: CCAGCCTTCTGACTTGGACAGCCTAGGAAGGAGTGCATTACACCAGTATGAAGGGGATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 90 bp | TTCCCATTCCTCTTTTCCCCTACATCTTGCCACACCTCCATCTTCTaGTCTGTGGACAGCTCCCAGATTCTAGCTACAGTTCCATCTTCC | + |
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Preference number: 1 (lower is better) Translates to: FPFLFSPTSCHTSIF*SVDSSQILATVPSS Trigger: GGAAGATGGAACTGTAGCTAGAATCTGGGAGCTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAAGAGGAATGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCTGGAGGCCCAGCCCTaGGATGGGGCTCTGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NSRSPVLTFPQFMALDFLLEAQP*DGALVL Trigger: CAGGACCAGAGCCCCATCTCAGGGCTGGGCCTCCAG...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCCTGAGCCATGGAGAGTaGGGCTTTCAGCTGTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWKCLPFIGFQWSGSARLLSHGE*GFQLSL Trigger: CAGCGACAGCTGAAAGCCTCACTCTCCATGGCTCAG...GAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CAA 90 bp | CTGAACACTGCCACAGCCACCATGCCTGGAAGTGCCTACCCTTCATaGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAGGAGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LNTATATMPGSAYPS*VSSGVEVLDSQEEA Trigger: AGCTTCCTCCTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | GTCACCAATCTGAGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCAGTTCCATCTTCCCCTaGCCCTCCCCATGTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VTNLRHSCTTPGALSLPFSSIFP*PSPCAH Trigger: ATGAGCACATGGGGAGGGGCAGGGGAAGATGGAACT...GAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAGTGCTCATCCCACCCCTaGCCTCTGACCCTGGATATT | + |
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Preference number: 2 (lower is better) Translates to: GSAYPSLVSSGVEVLDSQCSSHP*PLTLDI Trigger: AATATCCAGGGTCAGAGGCCAGGGGTGGGATGAGCA...CTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAGGCACACGAAGTCTCCTaGGATTCTTCCTGTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: GSAYPSLVSSGVEVLDSQAHEVS*DSSCPT Trigger: AGTGGGACAGGAAGAATCCCAGGAGACTTCGTGTGC...CTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | ACCCCACAATTTATCCTTCTAATTATTTTACTCTCTCCTACGGCTGAGCCATGGCCCTCCAGGAACTGGTaGGGCCCTACCACCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: TPQFILLIILLSPTAEPWPSRNW*GPTTFL Trigger: GAGGAAGGTGGTAGGGCCTCACCAGTTCCTGGAGGG...CCATGGCTCAGCCGTAGGAGAGAGTAAAATAATTAGAAGGATAAATTGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CAA 90 bp | ATACTTTACTCCCTTGCTACTCTGCCCCTTTCCACTGTGTCCCCATaGGCTCTGTCATGTCTCCTGTTTCCACACAACCTGCTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: ILYSLATLPLSTVSP*ALSCLLFPHNLLHT Trigger: TGTGTGAAGCAGGTTGTGTGGAAACAGGAGACATGACAGAGCCAATGGGGACACAGTGGAAAGGGGCAGAGTAGCAAGGGAGTAAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAGTTTTCCCCTACATCTTaGCACACCTCCATCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GSAYPSLVSSGVEVLDSQFSPTS*HTSIFC Trigger: GCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAA...CTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | GTCACCAATCTGAGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCCTCACAGGAGGAAGCTaGTCTCCCTACTTAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: VTNLRHSCTTPGALSLPFLTGGS*SPYLTF Trigger: GAAAGTTAAGTAGGGAGAGCAGCTTCCTCCTGTGAG...GAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | CAAAACAGCATCCAAGGCTGGGAACCTCATTTCTCAGGTCTGCATAGCCCTGAACACCATGCCTGGAAGTaGCTACCCTTCATTGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: QNSIQGWEPHFSGLHSPEHHAWK*LPFIGF Trigger: GAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTG...TTCAGGGCTATGCAGACCTGAGAAATGAGGTTCCCAGCCTTGGATGCTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCTATACACACACCAGGTTTTAGCTCTGGTCATCCATGGGGAAGGTGGCTATCCACTGTGTCCCCATTaGCTCTGTCATGTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LLYTHQVLALVIHGEGGYPLCPH*LCHVSC Trigger: ACAGGAGACATGACAGAGCCAATGGGGACACAGTGG...ATAGCCACCTTCCCCATGGATGACCAGAGCTAAAACCTGGTGTGTGTATAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTACAGAGAGAACACAGAGGAGGTGGTTCCAAGACCTACCCCACTCATGGTGCCTACCCTTCATTaGTTTCCAGTGGAGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SFYRENTEEVVPRPTPLMVPTLH*FPVEWK Trigger: CTTCCACTCCACTGGAAACCAATGAAGGGTAGGCAC...CATGAGTGGGGTAGGTCTTGGAACCACCTCCTCTGTGTTCTCTCTGTAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCTACTAAAGCCTTTGCTCTGGGTCATCTTGCCTGGCAGACACACTTGCACAGACTCTCCAACAGAATaGAAAGATGGGAAAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLLKPLLWVILPGRHTCTDSPTE*KDGKAE Trigger: CTCAGCTTTCCCATCTTTCCATTCTGTTGGAGAGTC...TGTGCAAGTGTGTCTGCCAGGCAAGATGACCCAGAGCAAAGGCTTTAGTAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACAATTTATCCTTCTAATTATTTTACTCTCTCCTACGGCTGAGCCATGGGCTTTCAGCTGTCGCTaGGAGCTCCTTCTCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: TPQFILLIILLSPTAEPWAFSCR*ELLLLS Trigger: GCTCAGGAGAAGGAGCTCCCAGCGACAGCTGAAAGC...CCATGGCTCAGCCGTAGGAGAGAGTAAAATAATTAGAAGGATAAATTGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCTAAAGCCTTTGCTCTaGGTCATCTTGCCTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: NSRSPVLTFPQFMALDFLLKPLL*VILPGR Trigger: TCTGCCAGGCAAGATGACCCAGAGCAAAGGCTTTAG...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | GTCACCAATCTGAGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCCCAGGAGGGTCTTTATaGGAATTTAGGACTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VTNLRHSCTTPGALSLPFPGGSL*EFRTVF Trigger: AAACACAGTCCTAAATTCTCATAAAGACCCTCCTGG...GAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTACAGAGAGAACACAGAGGAGGTGGTTCCAAGACCTACCCCACTCATGTATACTTTACTCCCTTaGTACTCTGCCCCTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SFYRENTEEVVPRPTPLMYTLLP*YSAPFH Trigger: GTGGAAAGGGGCAGAGTAGCAAGGGAGTAAAGTATA...CATGAGTGGGGTAGGTCTTGGAACCACCTCCTCTGTGTTCTCTCTGTAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGGTACTCTCCTTCCTGTCCGTCTaGCTTCCTCTTGCTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TFPQFMALDFLPSLVMVLSFLSV*LPLAPL Trigger: AAGAGGAGCAAGAGGAAGGCAGACGGACAGGAAGGA...GAGTACCATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTACAGAGAGAACACAGAGGAGGTGGTTCCAAGACCTACCCCACTCATGTGTCCAAGACAGCAATaGGACAAAACAGCATCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SFYRENTEEVVPRPTPLMCPRQQ*DKTASK Trigger: CTTGGATGCTGTTTTGTCCCATTGCTGTCTTGGACA...CATGAGTGGGGTAGGTCTTGGAACCACCTCCTCTGTGTTCTCTCTGTAAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGGTACTCAACTATTCCTTCAGGTaGCTCCACACTGAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: TFPQFMALDFLPSLVMVLNYSFR*LHTEHC Trigger: GCAGTGTTCAGTGTGGAGCCACCTGAAGGAATAGTT...GAGTACCATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGAAGCTTGCTCCATCTTaGAGACATATTTCTTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: NSRSPVLTFPQFMALDFLKLAPS*RHISSL Trigger: TAGGGAAGAAATATGTCTTCAAGATGGAGCAAGCTT...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR CCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGAGCTTCAGAAGAGACTaGAAAAATAGTACAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NSRSPVLTFPQFMALDFLSFRRD*KNSTSL Trigger: CAAGCTTGTACTATTTTTCCAGTCTCTTCTGAAGCT...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CAA 90 bp | AGAGCTTCAGAAGAGACTGGAAAAATAGTACAAGCTTGCTCCATCTaGAAGACATATTTCTTCCCTAGCCCTGAATCACCACAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: RASEETGKIVQACSI*KTYFFPSPESPQNH Trigger: GTGGTTTTGTGGTGATTCAGGGCTAGGGAAGAAATATGTCTTCAAGATGGAGCAAGCTTGTACTATTTTTCCAGTCTCTTCTGAAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR-3UTR TCA 90 bp | AGAGACTGGAAAAATAGTACAAGCTTGCTCCATCTTGAAGACATATTTCTTCCCCCCATCCAGGTGATGTaGAAAGGTTGTAGGAGTATA | + |
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Preference number: 2 (lower is better) Translates to: RDWKNSTSLLHLEDIFLPPIQVM*KGCRSI Trigger: TATACTCCTACAACCTTTTCACATCACCTGGATGGG...GGGAAGAAATATGTCTTCAAGATGGAGCAAGCTTGTACTATTTTTCCAGTCTCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 72 bp | GTGAGGCTTTCAGCTGTCGCTGGGAGCTCCTTCTCCTaGGCCAGAGGAGCCGATGAAGGTTCCCACGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: VRLSAVAGSSFS*ARGADEGSHAG Trigger: ACCAGCGTGGGAACCTTCATCGGCTCCTCTGGCTCAGGAGAAGGAGCTCCCAGCGACAGCTGAAAGCCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 72 bp | CGCTGGGAGCTCCTTCTCCTGAGCCAGAGGAGCCGATaGAGGTTCCCACGCTGGTTCAGCTGTCTGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: RWELLLLSQRSR*RFPRWFSCLPF Trigger: AAATGGCAGACAGCTGAACCAGCGTGGGAACCTTCATCGGCTCCTCTGGCTCAGGAGAAGGAGCTCCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR TCA 72 bp | CCCCACCCCCAATCTCCTGGTCCAGGGTCACCAATCTaGGACACAGCTGTACAACTCCAGGAGCCCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PHPQSPGPGSPI*DTAVQLQEPCP Trigger: AGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGACCCTGGACCAGGAGATTGGGGGTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 72 bp | ATTTCTCAGGTCTGCATAGCCCTGAATCGCCACCAATaGGTCCCTGGAGGCCCAGCCCTGAGATGGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: ISQVCIALNRHQ*VPGGPALRWGS Trigger: AGAGCCCCATCTCAGGGCTGGGCCTCCAGGGACCCATTGGTGGCGATTCAGGGCTATGCAGACCTGAGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 72 bp | GGCCCTACCACCTTCCTCAAATGCAGACCTTTGTGCTaGTTGGTGAAGATAGCCTTTCCCAGCCCCCAATCC | + |
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Preference number: 3 (lower is better) Translates to: GPTTFLKCRPLC*LVKIAFPSPQS Trigger: GGATTGGGGGCTGGGAAAGGCTATCTTCACCAAGCAGCACAAAGGTCTGCATTTGAGGAAGGTGGTAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR GCA 72 bp | ACAGCATCCAAGGCTGGGAACCTCATTTCTCAGGTCTaGATAGCCCTGAATCGCCACCAATGGGTCCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TASKAGNLISQV*IALNRHQWVPG Trigger: TCCAGGGACCCATTGGTGGCGATTCAGGGCTATGCAGACCTGAGAAATGAGGTTCCCAGCCTTGGATGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| 3UTR CCA 72 bp | TGGCTCCACACTGAACACTGCCACAGCCACCATGCCTaGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLHTEHCHSHHA*KCLPFIGFQWS Trigger: ACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAGTGTGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | CTCTGGGTCATCTTGCCTGGCAGACACACTTGCACATaGAGGGGACCACTTGACTCTGTTGGATGGGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LWVILPGRHTCT*RGPLDSVGWVN Trigger: GTTCACCCATCCAACAGAGTCAAGTGGTCCCCTCCATGTGCAAGTGTGTCTGCCAGGCAAGATGACCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | GCCTGGCAGACACACTTGCACATGGAGGGGACCACTTaGCTCTGTTGGATGGGTGAACAGCTCCTTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: AWQTHLHMEGTT*LCWMGEQLLLQ Trigger: CTGTAAAAGGAGCTGTTCACCCATCCAACAGAGTCAAGTGGTCCCCTCCATGTGCAAGTGTGTCTGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR GCA 72 bp | CACACTGAACACTGCCACAGCCACCATGCCTGGAAGTaGCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTEHCHSHHAWK*LPFIGFQWSGS Trigger: ACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGCAGTGTTCAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | GCACATGGAGGGGACCACTTGACTCTGTTGGATGGGTaGACAGCTCCTTTTACAGAGAGAACACAGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AHGGDHLTLLDG*TAPFTERTQRR Trigger: CCTCCTCTGTGTTCTCTCTGTAAAAGGAGCTGTTCACCCATCCAACAGAGTCAAGTGGTCCCCTCCATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR GCA 72 bp | CAGTGGAGTGGAAGTGCTAGACTCACAGGAGGAAGCTaGTCTCCCTACTTAACTTTCCTATCCCCTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: QWSGSARLTGGS*SPYLTFLSPPC Trigger: GCATGGAGGGGATAGGAAAGTTAAGTAGGGAGAGCAGCTTCCTCCTGTGAGTCTAGCACTTCCACTCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACAGCATCCAAGGCTGGGAACCTCATTTCTCAGGTCTGCATAGCCCTGAATCCACTGTGTCCCCATaGGCTCTGTCATGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QNSIQGWEPHFSGLHSPESTVSP*ALSCLL Trigger: CAGGAGACATGACAGAGCCAATGGGGACACAGTGGA...TTCAGGGCTATGCAGACCTGAGAAATGAGGTTCCCAGCCTTGGATGCTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | ACACCAGGCAAGTCTCCTTCACTCACTATTTTGGGATaGATCAGTGGGTTCTCAAACCCTATCCCCACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TPGKSPSLTILG*ISGFSNPIPTP Trigger: GGGGGTGGGGATAGGGTTTGAGAACCCACTGATTCATCCCAAAATAGTGAGTGAAGGAGACTTGCCTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | AACACTAACAGTGATCCTCCCCATTTCTGGTACTGCTaGGCCAACTGCCACTTGAGCCACCATTGGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NTNSDPPHFWYC*ANCHLSHHWTG Trigger: ACCAGTCCAATGGTGGCTCAAGTGGCAGTTGGCTCAGCAGTACCAGAAATGGGGAGGATCACTGTTAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | CTTCTAATTATTTTACTCTCTCCTACGGCTGAGCCATaGAGAGTGAGGCTTTCAGCTGTCGCTGGGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLIILLSPTAEP*RVRLSAVAGSS Trigger: GGAGCTCCCAGCGACAGCTGAAAGCCTCACTCTCCATGGCTCAGCCGTAGGAGAGAGTAAAATAATTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | GTCCTTAACTCTCTCTTCCTTAACTATTCCTTCAGGTaGCTCCACACTGAACACTGCCACAGCCACCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLNSLFLNYSFR*LHTEHCHSHHA Trigger: GGCATGGTGGCTGTGGCAGTGTTCAGTGTGGAGCCACCTGAAGGAATAGTTAAGGAAGAGAGAGTTAAGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | ACACCAGGTTTTAGCTCTGGTCATCCATGGGGAAGGTaGCTATTCAGCCTACTAAAGCCTTTGCTCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TPGFSSGHPWGR*LFSLLKPLLWV Trigger: GACCCAGAGCAAAGGCTTTAGTAGGCTGAATAGCCACCTTCCCCATGGATGACCAGAGCTAAAACCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTCTTTTCCCCTACATCTTGCCACACCTCCATCTTCTGCTCTGTGGACAGCCCACTCCTTCCGTCTaGCAAAAACACCCCACAATT | + |
|
Preference number: 3 (lower is better) Translates to: IPLFPYILPHLHLLLCGQPTPSV*QKHPTI Trigger: AATTGTGGGGTGTTTTTGCAAGACGGAAGGAGTGGG...CTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAAGAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR GCA 72 bp | CTCTTTTCCCCTACATCTTGCCACACCTCCATCTTCTaGTCTGTGGACAGCTCCCAGATTCTAGCTACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LFSPTSCHTSIF*SVDSSQILATV Trigger: AACTGTAGCTAGAATCTGGGAGCTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | CAAGTGAAGACCAGCTCTTCCTCATCCCCTTCATACTaGTGTAATGCACTCCTTCCTAGGCTGTCCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QVKTSSSSSPSY*CNALLPRLSKS Trigger: TGACTTGGACAGCCTAGGAAGGAGTGCATTACACCAGTATGAAGGGGATGAGGAAGAGCTGGTCTTCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | ACTTGCACATGGAGGGGACCACTTGACTCTGTTGGATaGGTGAACAGCTCCTTTTACAGAGAGAACACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TCTWRGPLDSVG*VNSSFYRENTE Trigger: CTCTGTGTTCTCTCTGTAAAAGGAGCTGTTCACCCATCCAACAGAGTCAAGTGGTCCCCTCCATGTGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | CGGTGTCACAGGTATTATCTCTGTCCAAGACAGCAATaGGACAAAACAGCATCCAAGGCTGGGAACCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RCHRYYLCPRQQ*DKTASKAGNLI Trigger: AATGAGGTTCCCAGCCTTGGATGCTGTTTTGTCCCATTGCTGTCTTGGACAGAGATAATACCTGTGACACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CCA 72 bp | GCTATACACACACCAGGTTTTAGCTCTGGTCATCCATaGGGAAGGTGGCTATTCAGCCTACTAAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AIHTPGFSSGHP*GRWLFSLLKPL Trigger: CAAAGGCTTTAGTAGGCTGAATAGCCACCTTCCCCATGGATGACCAGAGCTAAAACCTGGTGTGTGTATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCTCTTTTCCCCTACATCTTGCCACACCTCCATCTTCTGCTCTGTGGACAGCTCAAATGCAGACCTTaGTGCTGCTTGGTGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: IPLFPYILPHLHLLLCGQLKCRP*CCLVKI Trigger: TATCTTCACCAAGCAGCACAAAGGTCTGCATTTGAG...CTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAAGAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTACAGAGAGAACACAGAGGAGGTGGTTCCAAGACCTACCCCACTCATGCAAGCTTGCTCCATCTaGAAGACATATTTCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SFYRENTEEVVPRPTPLMQACSI*KTYFFP Trigger: AGGGAAGAAATATGTCTTCAAGATGGAGCAAGCTTG...CATGAGTGGGGTAGGTCTTGGAACCACCTCCTCTGTGTTCTCTCTGTAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGGTACTCAGTGCCTACCCTTCATaGGTTTCCAGTGGAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TFPQFMALDFLPSLVMVLSAYPS*VSSGVE Trigger: TTCCACTCCACTGGAAACCAATGAAGGGTAGGCACT...GAGTACCATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | TCAGCCCTTAAAAAGCCCTCTTTGTCCTCATTTCTGTaGGGTAATCGCCAAGAGAGCTTCAGAAGAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SALKKPSLSSFL*GNRQESFRRDW Trigger: CCAGTCTCTTCTGAAGCTCTCTTGGCGATTACCTCACAGAAATGAGGACAAAGAGGGCTTTTTAAGGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | CCAGGCACAATAAGGACAACTTCATTCTGTTACCGTTaGGCTGAACCAAGTGAAGACCAGCTCTTCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PGTIRTTSFCYR*AEPSEDQLFLI Trigger: GATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTCAACGGTAACAGAATGAAGTTGTCCTTATTGTGCCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR TCA 72 bp | ATTTATCCTTCTAATTATTTTACTCTCTCCTACGGCTaGGCCATGGAGAGTGAGGCTTTCAGCTGTCGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IYPSNYFTLSYG*AMESEAFSCRW Trigger: CCAGCGACAGCTGAAAGCCTCACTCTCCATGGCTCAGCCGTAGGAGAGAGTAAAATAATTAGAAGGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR GCA 72 bp | AGAGCTTCAGAAGAGACTGGAAAAATAGTACAAGCTTaGTCCATCTTGAAGACATATTTCTTCCCTAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RASEETGKIVQA*SILKTYFFPSP Trigger: AGGGCTAGGGAAGAAATATGTCTTCAAGATGGAGCAAGCTTGTACTATTTTTCCAGTCTCTTCTGAAGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAGGGCACTCCACCAGAGTaGAGAAGGACGGCAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSAYPSLVSSGVEVLDSQGTPPE*RRTARG Trigger: CCCCCTTGCCGTCCTTCTGCACTCTGGTGGAGTGCC...CTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CAA 72 bp | GCCACAGCCACCATGCCTGGAAGTGCCTACCCTTCATaGGTTTCCAGTGGAGTGGAAGTGCTAGACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ATATMPGSAYPS*VSSGVEVLDSQ Trigger: CTGTGAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGCATGGTGGCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTACTAAAGCCTTTGCTCTGGGTCATCTTGCCTGGCAGACACACTTGCACAAGGGCCGGTGGGCCTTaGTGCGCATGCGAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLKPLLWVILPGRHTCTRAGGP*CACEIL Trigger: AAGAATTTCGCATGCGCATCAAGGCCCACCGGCCCT...TGTGCAAGTGTGTCTGCCAGGCAAGATGACCCAGAGCAAAGGCTTTAGTAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAAGTGCCTACCCTTCATTGGTTTCCAGTGGAGTGGAAGTGCTAGACTCGGTGGGGATATGGACTaGCAGCTGCAAGGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWKCLPFIGFQWSGSARLGGDMD*QLQGSG Trigger: ACCAGAACCTTGCAGCTGGCAGTCCATATCCCCACC...GAGTCTAGCACTTCCACTCCACTGGAAACCAATGAAGGGTAGGCACTTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CAA 72 bp | CCTACCACCTTCCTCAAATGCAGACCTTTGTGCTGCTaGGTGAAGATAGCCTTTCCCAGCCCCCAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTTFLKCRPLCC*VKIAFPSPQSL Trigger: CAGGGATTGGGGGCTGGGAAAGGCTATCTTCACCAAGCAGCACAAAGGTCTGCATTTGAGGAAGGTGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | CCCATTCCTCTTTTCCCCTACATCTTGCCACACCTCCATCTTCTGCTCTGTGGACAGGACCATCTTGAATaGGAGGGAGAGCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIPLFPYILPHLHLLLCGQDHLE*EGEHQQ Trigger: CTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTG...TCCACAGAGCAGAAGATGGAGGTGTGGCAAGATGTAGGGGAAAAGAGGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | GTCACCAATCTGAGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCGGGGGACTCCACTTGTaGCAGGACCATCTTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VTNLRHSCTTPGALSLPFGGLHL*QDHLEW Trigger: CCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCC...GAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | CTTCATTCTGTTACCGTTGAGCTGAACCAAGTGAAGACCAGCTCTTCCTCATCCGCCAGGATCGGGTACTaGATGGCCAGGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSVTVELNQVKTSSSSSARIGY*MARNLS Trigger: GGACAGGTTCCTGGCCATCCAGTACCCGATCCTGGC...GGATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTCAACGGTAACAGAATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTATACACACACCAGGTTTTAGCTCTGGTCATCCATGGGGAAGGTGGCTATGGCCAAGGAGGAAGGTaGGGATATGGACTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLYTHQVLALVIHGEGGYGQGGR*GYGLPA Trigger: AGCTGGCAGTCCATATCCCCACCTTCCTCCTTGGCC...ATAGCCACCTTCCCCATGGATGACCAGAGCTAAAACCTGGTGTGTGTATAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGTTCCAACTCTAGCATGTCTCTTTCCTTCCCGGGGTATACTTTACTCCACTGGCACTCCAGGTaGCATCCGACATGTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTSSNSSMSLSFPGYTLLHWHSR*HPTCCE Trigger: TTCACAACATGTCGGATGTCACCTGGAGTGCCAGTG...GAGTAAAGTATACCCCGGGAAGGAAAGAGACATGCTAGAGTTGGAACTGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR TCA 90 bp | CTTCATTCTGTTACCGTTGAGCTGAACCAAGTGAAGACCAGCTCTTCCTCATCCAGGAACAGAAGCCCATaGTGCCCATGGGAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSVTVELNQVKTSSSSSRNRSP*CPWEGG Trigger: TCCTCCTTCCCATGGGCATCATGGGCTTCTGTTCCT...GGATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTCAACGGTAACAGAATGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCACACCTCCATCTTCTGCTCTGTGGACAGCTCCCAGATTCTAGCTACATGTGGAAGGTGTAGATaGGGATGCTTCCGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCHTSIFCSVDSSQILATCGRCR*GCFRSR Trigger: TCTGGATCGGAAGCATCCCCATCTACACCTTCCACA...TGTAGCTAGAATCTGGGAGCTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR TCA 90 bp | GTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGGGATGGCCAGTAGGTTaGGAACCAGGCCAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTFPQFMALDFLPSLVMGWPVG*EPGQGG Trigger: TCCTCCTTGGCCTGGTTCTCAACCTACTGGCCATCC...CATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTACAGAGAGAACACAGAGGAGGTGGTTCCAAGACCTACCCCACTCATGGAAGCCCAAGTGCACTaGGAGAAAGGAGACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFYRENTEEVVPRPTPLMEAQVH*EKGDHK Trigger: TTTGTGGTCTCCTTTCTCCCAGTGCACTTGGGCTTC...CATGAGTGGGGTAGGTCTTGGAACCACCTCCTCTGTGTTCTCTCTGTAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGTTCCTCACCAGATACTaGAGGAAGAAGCCCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSRSPVLTFPQFMALDFLFLTRY*RKKPKC Trigger: GCACTTGGGCTTCTTCCTGCAGTATCTGGTGAGGAA...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR TCA 90 bp | ACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGGTACTCAGACCAGCATCCAGATaGTGCAGCAGATCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFPQFMALDFLPSLVMVLRPASR*CSRSQR Trigger: CCTTTGGGATCTGCTGCATCATCTGGATGCTGGTCT...GAGTACCATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGAAACACAGAGACAACTaGAGGAACAAGCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSRSPVLTFPQFMALDFLKHRDN*RNKLMP Trigger: GGGCATCAGCTTGTTCCTGCAGTTGTCTCTGTGTTT...CAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR GCA 90 bp | CTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCCCCAGTTTATGGCTTTAGATATATGGACTGCCAGCTaGAAGGTTCTGGTAAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYNSRSPVLTFPQFMALDIWTAS*KVLVSL Trigger: TAAGCTTACCAGAACCTTGCAGCTGGCAGTCCATAT...ATCTAAAGCCATAAACTGGGGAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| 3UTR CAA 72 bp | GAAGAGACTGGAAAAATAGTACAAGCTTGCTCCATCTaGAAGACATATTTCTTCCCTAGCCCTGAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EETGKIVQACSI*KTYFFPSPESP Trigger: TGGTGATTCAGGGCTAGGGAAGAAATATGTCTTCAAGATGGAGCAAGCTTGTACTATTTTTCCAGTCTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS CCA 90 bp | CAGATGATGCAGCAGATCCCAAAGGTCTTCCTGGGCGACCGGAGATaGCTAGCCAGGATCGGGTACTGGATGGCCAGGAACCTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QMMQQIPKVFLGDRR*LARIGYWMARNLSR Trigger: CCTGGACAGGTTCCTGGCCATCCAGTACCCGATCCTGGCTAGCCATCTCCGGTCGCCCAGGAAGACCTTTGGGATCTGCTGCATCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS CCA 90 bp | CCAGCCCTTAGTGTCTCTCTGTTGGACCCAGTCCTCAGTGCTGTCTaGACGGCGCAGCAGGATGTGAATACTCCTATAGGAACAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PALSVSLLDPVLSAV*TAQQDVNTPIGTEA Trigger: GGCTTCTGTTCCTATAGGAGTATTCACATCCTGCTGCGCCGTCCAGACAGCACTGAGGACTGGGTCCAACAGAGAGACACTAAGGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS-3UTR CAA 90 bp | TCTTGCCACACCTCCATCTTCTGCTCTGTGGACAGCTCCCAGATTCTAGCTACACGGATGGCCAGTAGGTaGAGAACCAGGCCAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCHTSIFCSVDSSQILATRMASR*RTRPRR Trigger: CCTCCTTGGCCTGGTTCTCAACCTACTGGCCATCCG...TGTAGCTAGAATCTGGGAGCTGTCCACAGAGCAGAAGATGGAGGTGTGGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS TCA 90 bp | TGCAGAAGGACGGCAAGGGGGACTCCACTTGTGGCAGGACCATCTTaGATGGGAGGGAGAGCACCAGCAGTAAATCGAAAACAGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CRRTARGTPLVAGPS*MGGRAPAVNRKQPS Trigger: ACTTGGCTGTTTTCGATTTACTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTGCCGTCCTTCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
||
| CDS TCA 90 bp | GACGGCGCAGCAGGATGTGAATACTCCTATAGGAACAGAAGCCCATaGTGCCCATGGGAAGGAGGAAGCCAAAGATCTCCAGGGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DGAAGCEYSYRNRSP*CPWEGGSQRSPGGR Trigger: TCTTCCCCCTGGAGATCTTTGGCTTCCTCCTTCCCATGGGCATCATGGGCTTCTGTTCCTATAGGAGTATTCACATCCTGCTGCGCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | CTTCATTCTGTTACCGTTGAGCTGAACCAAGTGAAGACCAGCTCTTCCTCATCCGAGGGCCGGTGGGCCTaGATGCGCATGCGAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LHSVTVELNQVKTSSSSSEGRWA*MRMRNS Trigger: AGAATTTCGCATGCGCATCAAGGCCCACCGGCCCTC...GGATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTCAACGGTAACAGAATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS TCA 90 bp | GGAAGCCAAAGATCTCCAGGGGGAAGAAGACACTGGCACTCCAGGTaGCATCCGACATGTTGTGAAAGCACTTGTATCTCTCCACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GSQRSPGGRRHWHSR*HPTCCESTCISPLP Trigger: GGGAAGTGGAGAGATACAAGTGCTTTCACAACATGTCGGATGTCACCTGGAGTGCCAGTGTCTTCTTCCCCCTGGAGATCTTTGGCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 90 bp | TTGAGAACCAGGCCAAGGAGGAAGGTGGGGATATGGACTGCCAGCTaGAAGGTTCTGGTAAGCTTATCCACGGAATCGAATGAGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LRTRPRRKVGIWTAS*KVLVSLSTESNEQL Trigger: CAACTGCTCATTCGATTCCGTGGATAAGCTTACCAGAACCTTGCAGCTGGCAGTCCATATCCCCACCTTCCTCCTTGGCCTGGTTCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | CTTCATTCTGTTACCGTTGAGCTGAACCAAGTGAAGACCAGCTCTTCCTCATCCCAAGGGGGACTCCACTaGTGGCAGGACCATCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LHSVTVELNQVKTSSSSSQGGLH*WQDHLE Trigger: TTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTG...GGATGAGGAAGAGCTGGTCTTCACTTGGTTCAGCTCAACGGTAACAGAATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | ACCCCACAATTTATCCTTCTAATTATTTTACTCTCTCCTACGGCTGAGCCATGGTCCTGGTTGACCAGCTaGATTGTGGAGGGCCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TPQFILLIILLSPTAEPWSWLTS*IVEGRW Trigger: CCACCGGCCCTCCACAATCAAGCTGGTCAACCAGGA...CCATGGCTCAGCCGTAGGAGAGAGTAAAATAATTAGAAGGATAAATTGTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | GTCACCAATCTGAGACACAGCTGTACAACTCCAGGAGCCCTGTCCTTACCTTTCACATCAAGGCAGCAGTaGATGTTGGAGAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: VTNLRHSCTTPGALSLPFTSRQQ*MLEKHR Trigger: TCTGTGTTTCTCCAACATCAACTGCTGCCTTGATGT...GAAAGGTAAGGACAGGGCTCCTGGAGTTGTACAGCTGTGTCTCAGATTGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 90 bp | ATGTTGGAGAAACACAGAGACAACTGCAGGAACAAGCTGATGCCCTaGTTCATTCTGCAGTCCAAGATAAAGCGGTTCCTCACCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: MLEKHRDNCRNKLMP*FILQSKIKRFLTRY Trigger: GTATCTGGTGAGGAACCGCTTTATCTTGGACTGCAGAATGAAGCAGGGCATCAGCTTGTTCCTGCAGTTGTCTCTGTGTTTCTCCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | GTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGCTTAGTGTCTCTCTGTaGGACCCAGTCCTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VLTFPQFMALDFLPSLVMLSVSL*DPVLSA Trigger: AGCACTGAGGACTGGGTCCAACAGAGAGACACTAAG...CATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 90 bp | AAAACATCAAGGCAGCAGTTGATGTTGGAGAAACACAGAGACAACTaGAGGAACAAGCTGATGCCCTGCTTCATTCTGCAGTCCAAGATA | + |
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Preference number: 5 (lower is better) Translates to: KTSRQQLMLEKHRDN*RNKLMPCFILQSKI Trigger: TATCTTGGACTGCAGAATGAAGCAGGGCATCAGCTTGTTCCTGCAGTTGTCTCTGTGTTTCTCCAACATCAACTGCTGCCTTGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS-3UTR CAA 90 bp | GTCCTTACCTTTCCCCAGTTTATGGCTTTAGATTTCCTGCCCTCTTTGGTAATGAGGCAGCAGTTGATGTaGGAGAAACACAGAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: VLTFPQFMALDFLPSLVMRQQLM*EKHRDN Trigger: GTTGTCTCTGTGTTTCTCCAACATCAACTGCTGCCT...CATTACCAAAGAGGGCAGGAAATCTAAAGCCATAAACTGGGGAAAGGTAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CCA 72 bp | CTGGGCGACCGGAGATGGCTAGCCAGGATCGGGTACTaGATGGCCAGGAACCTGTCCAGGCTGATGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LGDRRWLARIGY*MARNLSRLMKQ Trigger: CTGCTTCATCAGCCTGGACAGGTTCCTGGCCATCCAGTACCCGATCCTGGCTAGCCATCTCCGGTCGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CCA 72 bp | CAGCAGATCCCAAAGGTCTTCCTGGGCGACCGGAGATaGCTAGCCAGGATCGGGTACTGGATGGCCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QQIPKVFLGDRR*LARIGYWMARN Trigger: GTTCCTGGCCATCCAGTACCCGATCCTGGCTAGCCATCTCCGGTCGCCCAGGAAGACCTTTGGGATCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CCA 72 bp | CAGAGTGCAGAAGGACGGCAAGGGGGACTCCACTTGTaGCAGGACCATCTTGAATGGGAGGGAGAGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: QSAEGRQGGLHL*QDHLEWEGEHQ Trigger: CTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTGCCGTCCTTCTGCACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 90 bp | CCAGATGCAGGCTCTCTTTTGTACCCAGCCCTTAGTGTCTCTCTGTaGGACCCAGTCCTCAGTGCTGTCTGGACGGCGCAGCAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: PDAGSLLYPALSVSL*DPVLSAVWTAQQDV Trigger: CACATCCTGCTGCGCCGTCCAGACAGCACTGAGGACTGGGTCCAACAGAGAGACACTAAGGGCTGGGTACAAAAGAGAGCCTGCATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 72 bp | GGCTCTCTTTTGTACCCAGCCCTTAGTGTCTCTCTGTaGGACCCAGTCCTCAGTGCTGTCTGGACGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSLLYPALSVSL*DPVLSAVWTAQ Trigger: CTGCGCCGTCCAGACAGCACTGAGGACTGGGTCCAACAGAGAGACACTAAGGGCTGGGTACAAAAGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 90 bp | TTCCTCTTCTTTAGGAAGGCACTGAAGCCTCGGATGGCCAGTAGGTaGAGAACCAGGCCAAGGAGGAAGGTGGGGATATGGACTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLFFRKALKPRMASR*RTRPRRKVGIWTAS Trigger: GCTGGCAGTCCATATCCCCACCTTCCTCCTTGGCCTGGTTCTCAACCTACTGGCCATCCGAGGCTTCAGTGCCTTCCTAAAGAAGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 90 bp | GTGCAGAAGGACGGCAAGGGGGACTCCACTTGTGGCAGGACCATCTaGAATGGGAGGGAGAGCACCAGCAGTAAATCGAAAACAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VQKDGKGDSTCGRTI*NGRESTSSKSKTAK Trigger: CTTGGCTGTTTTCGATTTACTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTGCCGTCCTTCTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 72 bp | TTTAGGAAGGCACTGAAGCCTCGGATGGCCAGTAGGTaGAGAACCAGGCCAAGGAGGAAGGTGGGGATATGG | + |
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Preference number: 6 (lower is better) Translates to: FRKALKPRMASR*RTRPRRKVGIW Trigger: CCATATCCCCACCTTCCTCCTTGGCCTGGTTCTCAACCTACTGGCCATCCGAGGCTTCAGTGCCTTCCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CAA 72 bp | GACGGCAAGGGGGACTCCACTTGTGGCAGGACCATCTaGAATGGGAGGGAGAGCACCAGCAGTAAATCGAAA | + |
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Preference number: 6 (lower is better) Translates to: DGKGDSTCGRTI*NGRESTSSKSK Trigger: TTTCGATTTACTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTGCCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS TCA 72 bp | ACGGCAAGGGGGACTCCACTTGTGGCAGGACCATCTTaGATGGGAGGGAGAGCACCAGCAGTAAATCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: TARGTPLVAGPS*MGGRAPAVNRK Trigger: TTTTCGATTTACTGCTGGTGCTCTCCCTCCCATTCAAGATGGTCCTGCCACAAGTGGAGTCCCCCTTGCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 72 bp | AGGCCAAGGAGGAAGGTGGGGATATGGACTGCCAGCTaGAAGGTTCTGGTAAGCTTATCCACGGAATCGAAT | + |
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Preference number: 6 (lower is better) Translates to: RPRRKVGIWTAS*KVLVSLSTESN Trigger: ATTCGATTCCGTGGATAAGCTTACCAGAACCTTGCAGCTGGCAGTCCATATCCCCACCTTCCTCCTTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 72 bp | CTGCAGTCCAAGATAAAGCGGTTCCTCACCAGATACTaGAGGAAGAAGCCCAAGTGCACTGGGAGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQSKIKRFLTRY*RKKPKCTGRKE Trigger: CTCCTTTCTCCCAGTGCACTTGGGCTTCTTCCTGCAGTATCTGGTGAGGAACCGCTTTATCTTGGACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS CCA 72 bp | GTATCCTGGTTGACCAGCTTGATTGTGGAGGGCCGGTaGGCCTTGATGCGCATGCGAAATTCTTTGATGACA | + |
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Preference number: 6 (lower is better) Translates to: VSWLTSLIVEGR*ALMRMRNSLMT Trigger: TGTCATCAAAGAATTTCGCATGCGCATCAAGGCCCACCGGCCCTCCACAATCAAGCTGGTCAACCAGGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 72 bp | CGGTTCCTCACCAGATACTGCAGGAAGAAGCCCAAGTaGACTGGGAGAAAGGAGACCACAAAGATGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: RFLTRYCRKKPK*TGRKETTKMTR Trigger: TCTTGTCATCTTTGTGGTCTCCTTTCTCCCAGTGCACTTGGGCTTCTTCCTGCAGTATCTGGTGAGGAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 72 bp | AGGCAGCAGTTGATGTTGGAGAAACACAGAGACAACTaGAGGAACAAGCTGATGCCCTGCTTCATTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RQQLMLEKHRDN*RNKLMPCFILQ Trigger: CTGCAGAATGAAGCAGGGCATCAGCTTGTTCCTGCAGTTGTCTCTGTGTTTCTCCAACATCAACTGCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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| CDS GCA 72 bp | AAACACAGAGACAACTGCAGGAACAAGCTGATGCCCTaGTTCATTCTGCAGTCCAAGATAAAGCGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KHRDNCRNKLMP*FILQSKIKRFL Trigger: GAGGAACCGCTTTATCTTGGACTGCAGAATGAAGCAGGGCATCAGCTTGTTCCTGCAGTTGTCTCTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086975.7 |
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