Pregenerated sensors for GPR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044317Ensembl transcript IDs: ENSMUST00000060225.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAATGGATGCTCTTCCTGTCCTGGGCCTCCTTTCTAAACCAGCCCTaGTTACGATTCCTTCAGGCAGGCTGCTCAGATTGGCTCTTACCT | + |
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Preference number: 1 (lower is better) Translates to: EWMLFLSWASFLNQP*LRFLQAGCSDWLLP Trigger: AGGTAAGAGCCAATCTGAGCAGCCTGCCTGAAGGAATCGTAAGCAGGGCTGGTTTAGAAAGGAGGCCCAGGACAGGAAGAGCATCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 90 bp | CTAAACCAGCCCTGCTTACGATTCCTTCAGGCAGGCTGCTCAGATTaGCTCTTACCTGCTCTTGACAGTCCCTGTCCTCCTTCACCATCT | + |
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Preference number: 1 (lower is better) Translates to: LNQPCLRFLQAGCSD*LLPALDSPCPPSPS Trigger: AGATGGTGAAGGAGGACAGGGACTGTCAAGAGCAGGTAAGAGCCAATCTGAGCAGCCTGCCTGAAGGAATCGTAAGCAGGGCTGGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 90 bp | CCGGGCTTTGTTGTATTTAATATTTTGAGACAGGGCTTCACTTTGTaGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PGFVVFNILRQGFTL*SKWVLNFQIFPRPP Trigger: GGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAATATTAAATACAACAAAGCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGCTTAATTATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGATGATGACAAACTCCTaGCTGTGTTGTTCCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SWLNYPLIPNSPWLAPHLMMTNS*LCCSPF Trigger: GAAGGGGGAACAACACAGCCAGGAGTTTGTCATCAT...CAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAATTAAGCCAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTGGAATCACACACTTGTAGCATCTGATCAGACTCGTCTGTCCTTATCTATCCCAAACTCTCCATaGCTGGCTCCCCATCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSWNHTLVASDQTRLSLSIPNSP*LAPHLG Trigger: GCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGAT...AGATAAGGACAGACGAGTCTGATCAGATGCTACAAGTGTGTGATTCCAGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGGATTAAGTGAATCATTGGGGATCATAGTGGAAGAAGATGACAGAGAGATACAACCGGAAGGGTaGAGGATGACAGTTGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLGLSESLGIIVEEDDREIQPEG*RMTVGH Trigger: ATGCCCAACTGTCATCCTGCACCCTTCCGGTTGTAT...CTCTCTGTCATCTTCTTCCACTATGATCCCCAATGATTCACTTAATCCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CAA 90 bp | TCCCCGGGCTTTGTTGTATTTAATATTTTGAGACAGGGCTTCACTTaGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SPGFVVFNILRQGFT*WSKWVLNFQIFPRP Trigger: AGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAATATTAAATACAACAAAGCCCGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGATATTTACACACATTTaGATACAACCGGAAGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: QGFTLWSKWVLNFQIFPRIFTHI*IQPEGC Trigger: GCACCCTTCCGGTTGTATGCAAATGTGTGTAAATAT...CCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR CCA 90 bp | AATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTATTACCCAGAAACCAAGCAGTTaGCTTAATTATCCCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: NSFPKYKQEGITSMLGITQKPSS*LNYPLI Trigger: GATGAGGGGATAATTAAGCCAACTGCTTGGTTTCTG...GGTAATACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 72 bp | CCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTaGGCGCCCATGATGACAAACTCCTGGCTGTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: PSSQTLHGWLPI*APMMTNSWLCC Trigger: ACAACACAGCCAGGAGTTTGTCATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 72 bp | GGCTTAATTATCCCCTCATCCCAAACTCTCCATGGCTaGCTCCCCATCTGGGCGCCCATGATGACAAACTCC | + |
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Preference number: 3 (lower is better) Translates to: GLIIPSSQTLHG*LPIWAPMMTNS Trigger: GGAGTTTGTCATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAATTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 72 bp | CCCTGCTTACGATTCCTTCAGGCAGGCTGCTCAGATTaGCTCTTACCTGCTCTTGACAGTCCCTGTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PCLRFLQAGCSD*LLPALDSPCPP Trigger: AGGAGGACAGGGACTGTCAAGAGCAGGTAAGAGCCAATCTGAGCAGCCTGCCTGAAGGAATCGTAAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CCA 72 bp | AATATTTTGAGACAGGGCTTCACTTTGTGGTCCAAGTaGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: NILRQGFTLWSK*VLNFQIFPRPP Trigger: GGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR-3UTR CAA 90 bp | AATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTATTACCCATATTTACACACATTaGCATACAACCGGAAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: NSFPKYKQEGITSMLGITHIYTH*HTTGRV Trigger: CACCCTTCCGGTTGTATGCAAATGTGTGTAAATATG...GGTAATACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | TATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGATCCAGCACAATGGCGATaGGGCTCAGGGCCAGACGTT | + |
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Preference number: 4 (lower is better) Translates to: YPLIPNSPWLAPHLGAHDPAQWR*GSGPDV Trigger: AACGTCTGGCCCTGAGCCTCATCGCCATTGTGCTGG...ATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | TATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGATGCATTGGCCATCTCCTaGGGCTTGTTGCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YPLIPNSPWLAPHLGAHDALAIS*GLLLAR Trigger: CCTGGCCAGCAACAAGCCCCAGGAGATGGCCAATGC...ATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | AGTTGGCTTAATTATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGCACCTGCCGGTAGGCTaGCCACAGGGCCAGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SWLNYPLIPNSPWLAPHLHLPVG*PQGQAV Trigger: AACTGCCTGGCCCTGTGGGCAGCCTACCGGCAGGTG...CAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAATTAAGCCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | TATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGATCCCACAGCGGCAAAGTaGAGATGTACAGCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: YPLIPNSPWLAPHLGAHDPTAAK*RCTAGL Trigger: CAGACCTGCTGTACATCTGCACTTTGCCGCTGTGGG...ATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | ATTATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGGATGTAGAGAGATGGTaGGAAGAGGTGGTCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: IIPSSQTLHGWLPIWAPMDVERW*EEVVHS Trigger: CGAGTGGACCACCTCTTCCCACCATCTCTCTACATC...CATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | ATTATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGATCTTGACTTTCTCCTaGCGCTCGGTGGACACACTG | + |
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Preference number: 4 (lower is better) Translates to: IIPSSQTLHGWLPIWAPMILTFS*RSVDTL Trigger: CAGTGTGTCCACCGAGCGCCAGGAGAAAGTCAAGAT...CATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | CAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGTGCGGGCACCCTCGTTaGCCAGGCAGTAGAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QGFTLWSKWVLNFQIFPRCGHPR*PGSRGW Trigger: CCATCCTCTACTGCCTGGTCAACGAGGGTGCCCGCA...CCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | GTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCCAAGTAGCTGGAAGGGTGTCTCCAGGGTaGGGGAAGCATTGGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: VQVGLELPNLSSASQVAGRVSPG*GKHWPS Trigger: AGATGGCCAATGCTTCCCTCACCCTGGAGACACCCT...TCCAGCTACTTGGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | GTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCCAAGTAGCTGGACACACTGCTCTGCACTaGCCTCAGGATGCCACGGTA | + |
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Preference number: 4 (lower is better) Translates to: VQVGLELPNLSSASQVAGHTALH*PQDATV Trigger: TACCGTGGCATCCTGAGGGCAGTGCAGAGCAGTGTG...TCCAGCTACTTGGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | CAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCAGGTAGACGGCGCTaGGAGACAGCAGGAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QGFTLWSKWVLNFQIFPRPGRRR*ETAGEH Trigger: ATGCTCTCCTGCTGTCTCGCAGCGCCGTCTACCTGG...CCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CAA 72 bp | TTCAGGCAGGCTGCTCAGATTGGCTCTTACCTGCTCTaGACAGTCCCTGTCCTCCTTCACCATCTGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: FRQAAQIGSYLL*TVPVLLHHLRL Trigger: CAGTCTCAGATGGTGAAGGAGGACAGGGACTGTCAAGAGCAGGTAAGAGCCAATCTGAGCAGCCTGCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | CAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGGCACAGCAACATGAGTaGCCAGGGGAAGAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGFTLWSKWVLNFQIFPRAQQHE*PGEEEA Trigger: GGCTTCCTCTTCCCCTGGGCACTCATGTTGCTGTGC...CCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGATTAAGTGAATCATTGGGGATCATAGTGGAAGAAGATGACAGAGAGAGAGCGGTGCTGAATTaGCGCCCAGCTCCGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLGLSESLGIIVEEDDRERAVLN*RPAPWP Trigger: GGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCT...CTCTCTGTCATCTTCTTCCACTATGATCCCCAATGATTCACTTAATCCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | AGTTGGCTTAATTATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGAAGATGTAGAGAGATaGTGGGAAGAGGTGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SWLNYPLIPNSPWLAPHLEDVER*WEEVVH Trigger: GTGGACCACCTCTTCCCACCATCTCTCTACATCTTC...CAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATAATTAAGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGAATCACACACTTGTAGCATCTGATCAGACTCGTCTGTCCTTATCTCAGGAGCCAGGGCCGTaGATCCAGTTGTCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSWNHTLVASDQTRLSLSQEPGP*IQLSWW Trigger: CCACCATGACAACTGGATCCACGGCCCTGGCTCCTG...AGATAAGGACAGACGAGTCTGATCAGATGCTACAAGTGTGTGATTCCAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | TCAGAATATCTGCTTGACATAGCAGTTAACATCTGTAAGCCTAGCACTTGGGAATGGCGCCCAGCTCCGTaGCCCAGACCACAGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SEYLLDIAVNICKPSTWEWRPAP*PRPQSS Trigger: TGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCA...TTCCCAAGTGCTAGGCTTACAGATGTTAACTGCTATGTCAAGCAGATATTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | ATTTTGAGACAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCGCAGCCCCACCCCGATaGCGAAGATGTAGAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: ILRQGFTLWSKWVLNFQIAAPPR*RRCREM Trigger: CATCTCTCTACATCTTCGTCATCGGGGTGGGGCTGC...GATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | TCAGAATATCTGCTTGACATAGCAGTTAACATCTGTAAGCCTAGCACTTGGGAAGGTTGTGCAGGGCCTTaGCCACATCACTGCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SEYLLDIAVNICKPSTWEGCAGP*PHHCGH Trigger: GTGCCCGCAGTGATGTGGCCAAGGCCCTGCACAACC...TTCCCAAGTGCTAGGCTTACAGATGTTAACTGCTATGTCAAGCAGATATTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | GTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCCAAGTAGCTGGAACAGGAAGGCGATGCTaGTATAGATGTTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VQVGLELPNLSSASQVAGTGRRC*YRCCCR Trigger: TCTACAGCAACATCTATATCAGCATCGCCTTCCTGT...TCCAGCTACTTGGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | GTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCCAAGTAGCTGGAGATGTACAGCAGGTCTaGAATGCTCAAGTTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: VQVGLELPNLSSASQVAGDVQQV*NAQVHQ Trigger: CTGATGAACTTGAGCATTGCAGACCTGCTGTACATC...TCCAGCTACTTGGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGAATCACACACTTGTAGCATCTGATCAGACTCGTCTGTCCTTATCTCCACCCAACGCTCCATaGGGAACTTCTCAAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSWNHTLVASDQTRLSLSPPNAP*GTSQSR Trigger: TCTGCTTTGAGAAGTTCCCCATGGAGCGTTGGGTGG...AGATAAGGACAGACGAGTCTGATCAGATGCTACAAGTGTGTGATTCCAGCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | GTGGTAAATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTCCTGGGGCTTGTTGCTaGCCAGGAAGCGGAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VVNSFPKYKQEGITSMLGPGACC*PGSGGG Trigger: ACCTCCTCCGCTTCCTGGCCAGCAACAAGCCCCAGG...ACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATTTACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | GTGGTAAATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTACCTTCAGTGGCACCTaGTCCCCCTGGGCAGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: VVNSFPKYKQEGITSMLGTFSGT*SPWAVG Trigger: TCCGACTGCCCAGGGGGACCAGGTGCCACTGAAGGT...ACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATTTACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR TCA 90 bp | AGTAGCTGGAATCACACACTTGTAGCATCTGATCAGACTCGTCTGTCCTTATCTTGTTGCTGTAGAAGATaGAGCCAAAGAGCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSWNHTLVASDQTRLSLSCCCRR*SQRACR Trigger: CCTGCAAGCTCTTTGGCTTCATCTTCTACAGCAACA...AGATAAGGACAGACGAGTCTGATCAGATGCTACAAGTGTGTGATTCCAGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | GTGGTAAATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTAAGCGGAGGAGGTTGTaGAGGGCCTTGGCCACATCA | + |
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Preference number: 4 (lower is better) Translates to: VVNSFPKYKQEGITSMLGKRRRL*RALATS Trigger: TGATGTGGCCAAGGCCCTGCACAACCTCCTCCGCTT...ACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CAA 72 bp | TTCCCCCTTCAGACCCTGCTGGGATTAAGTGAATCATaGGGGATCATAGTGGAAGAAGATGACAGAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FPLQTLLGLSES*GIIVEEDDREK Trigger: TTTCTCTCTGTCATCTTCTTCCACTATGATCCCCAATGATTCACTTAATCCCAGCAGGGTCTGAAGGGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGATTAAGTGAATCATTGGGGATCATAGTGGAAGAAGATGACAGAGAGACAGCAGGTCTGCAATaGTCAAGTTCATCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LLGLSESLGIIVEEDDRETAGLQ*SSSSGR Trigger: TCTACCTGATGAACTTGAGCATTGCAGACCTGCTGT...CTCTCTGTCATCTTCTTCCACTATGATCCCCAATGATTCACTTAATCCCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| 3UTR CAA 72 bp | GTCCTCCTTCACCATCTGAGACTGAGAGAATGCTGTTaGTGTAGAATCTCAGAATATCTGCTTGACATAGCA | + |
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Preference number: 4 (lower is better) Translates to: VLLHHLRLRECC*CRISEYLLDIA Trigger: TGCTATGTCAAGCAGATATTCTGAGATTCTACACAAACAGCATTCTCTCAGTCTCAGATGGTGAAGGAGGAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CCA 90 bp | AATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTATTACCCGAAACAGCTCATCATaGAAGAGCGGTGCTGAATTG | + |
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Preference number: 4 (lower is better) Translates to: NSFPKYKQEGITSMLGITRNSSS*KSGAEL Trigger: CAATTCAGCACCGCTCTTCCATGATGAGCTGTTTCG...GGTAATACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 90 bp | CAGCACCTTCAGTGGCACCTGGTCCCCCTGGGCAGTCGGAGGCACTaGCCAGACAGCCCCGGACGACTTGCCGGTGGTGCTCCTCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: QHLQWHLVPLGSRRH*PDSPGRLAGGAPLG Trigger: TCCAAGAGGAGCACCACCGGCAAGTCGTCCGGGGCTGTCTGGGCAGTGCCTCCGACTGCCCAGGGGGACCAGGTGCCACTGAAGGTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 90 bp | ATTGGCGCCCAGCTCCGTGGCCCAGACCACAGAGCTCACAGCCACTaGTGTCTTGACCCGGCGCAGGCGTGCAAAGCGCAGAGGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: IGAQLRGPDHRAHSH*CLDPAQACKAQRMS Trigger: GCTCATCCTCTGCGCTTTGCACGCCTGCGCCGGGTCAAGACAGCAGTGGCTGTGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCAAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 90 bp | GTTGGTGGGCAGCCCCACCCCGATGACGAAGATGTAGAGAGATGGTaGGAAGAGGTGGTCCACTCGAGAGTCCACATGGCAGCCCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VGGQPHPDDEDVERW*EEVVHSRVHMAALP Trigger: GGGGAGGGCTGCCATGTGGACTCTCGAGTGGACCACCTCTTCCCACCATCTCTCTACATCTTCGTCATCGGGGTGGGGCTGCCCACCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | TATCCCCTCATCCCAAACTCTCCATGGCTGGCTCCCCATCTGGGCGCCCATGATGCCATCTCCTGGGGCTaGTTGCTGGCCAGGAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: YPLIPNSPWLAPHLGAHDAISWG*LLARKR Trigger: CCGCTTCCTGGCCAGCAACAAGCCCCAGGAGATGGC...ATCATGGGCGCCCAGATGGGGAGCCAGCCATGGAGAGTTTGGGATGAGGGGATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 90 bp | GCAGTTGGTGGGCAGCCCCACCCCGATGACGAAGATGTAGAGAGATaGTGGGAAGAGGTGGTCCACTCGAGAGTCCACATGGCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: AVGGQPHPDDEDVER*WEEVVHSRVHMAAL Trigger: GAGGGCTGCCATGTGGACTCTCGAGTGGACCACCTCTTCCCACCATCTCTCTACATCTTCGTCATCGGGGTGGGGCTGCCCACCAACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS TCA 90 bp | GTGGTTGTAGCGATCACGAAACAGCTCATCATGGAAGAGCGGTGCTaGATTGGCGCCCAGCTCCGTGGCCCAGACCACAGAGCTCACAGC | + |
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Preference number: 5 (lower is better) Translates to: VVVAITKQLIMEERC*IGAQLRGPDHRAHS Trigger: GCTGTGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTTCCATGATGAGCTGTTTCGTGATCGCTACAACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 90 bp | TGTAGCGATCACGAAACAGCTCATCATGGAAGAGCGGTGCTGAATTaGCGCCCAGCTCCGTGGCCCAGACCACAGAGCTCACAGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: CSDHETAHHGRAVLN*RPAPWPRPQSSQPL Trigger: CAGTGGCTGTGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTTCCATGATGAGCTGTTTCGTGATCGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | GTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGCCTCCCAAGTAGCTGGAGGGTCAGCCACACAATaGAGGCTGGTGAAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VQVGLELPNLSSASQVAGGSATQ*RLVKAR Trigger: CCTGGCCTTCACCAGCCTCAATTGTGTGGCTGACCC...TCCAGCTACTTGGGAGGCCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCTTTCCTCGGATCTCCTGGGGCTTGTaGCTGGCCAGGAAGCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QGFTLWSKWVLNFQIFPRISWGL*LARKRR Trigger: CCTCCGCTTCCTGGCCAGCAACAAGCCCCAGGAGAT...CCGAGGAAAGATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 90 bp | CCACAAAGACGCGGTACAGATTCATCCAGGCCACCCAACGCTCCATaGGGAACTTCTCAAAGCAGAAGGTGTGGTTGTAGCGATCACGAA | + |
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Preference number: 5 (lower is better) Translates to: PQRRGTDSSRPPNAP*GTSQSRRCGCSDHE Trigger: TTCGTGATCGCTACAACCACACCTTCTGCTTTGAGAAGTTCCCCATGGAGCGTTGGGTGGCCTGGATGAATCTGTACCGCGTCTTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGATTAAGTGAATCATTGGGGATCATAGTGGAAGAAGATGACAGAGAGACAGCCACTGCTGTCTaGACCCGGCGCAGGCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLGLSESLGIIVEEDDRETATAV*TRRRRA Trigger: TGCACGCCTGCGCCGGGTCAAGACAGCAGTGGCTGT...CTCTCTGTCATCTTCTTCCACTATGATCCCCAATGATTCACTTAATCCCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | ATTTTGAGACAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCAAGAGCGGTGCTGAATaGGCGCCCAGCTCCGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ILRQGFTLWSKWVLNFQIKSGAE*APSSVA Trigger: GGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTT...GATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 90 bp | GAAGTAGTCGACCCACAGCGGCAAAGTGCAGATGTACAGCAGGTCTaGAATGCTCAAGTTCATCAGGTAGACGCCCAGCTCATTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: EVVDPQRQSADVQQV*NAQVHQVDAQLIVL Trigger: CAACACAATGAGCTGGGCGTCTACCTGATGAACTTGAGCATTGCAGACCTGCTGTACATCTGCACTTTGCCGCTGTGGGTCGACTACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | ATTTTGAGACAGGGCTTCACTTTGTGGTCCAAGTGGGTCTTGAACTTCCAAATCAGGAAGCGGAGGAGGTaGTGCAGGGCCTTGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: ILRQGFTLWSKWVLNFQIRKRRR*CRALAT Trigger: TGTGGCCAAGGCCCTGCACAACCTCCTCCGCTTCCT...GATTTGGAAGTTCAAGACCCACTTGGACCACAAAGTGAAGCCCTGTCTCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 90 bp | TCCAGTTGTCATGGTGGAGGAAGTAGTCGACCCACAGCGGCAAAGTaGAGATGTACAGCAGGTCTGCAATGCTCAAGTTCATCAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SSCHGGGSSRPTAAK*RCTAGLQCSSSSGR Trigger: TCTACCTGATGAACTTGAGCATTGCAGACCTGCTGTACATCTGCACTTTGCCGCTGTGGGTCGACTACTTCCTCCACCATGACAACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | TCAGAATATCTGCTTGACATAGCAGTTAACATCTGTAAGCCTAGCACTTGGGAAAGGGTGAGGGAAGCATaGGCCATCTCCTGGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SEYLLDIAVNICKPSTWERVREA*AISWGL Trigger: CAAGCCCCAGGAGATGGCCAATGCTTCCCTCACCCT...TTCCCAAGTGCTAGGCTTACAGATGTTAACTGCTATGTCAAGCAGATATTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS-3UTR CAA 90 bp | AATAGCTTTCCAAAATACAAACAAGAAGGAATTACCAGCATGCTAGGTATTACCGCCAGACGTTTGATCTaGACTTTCTCCTGGCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: NSFPKYKQEGITSMLGITARRLI*TFSWRS Trigger: CGAGCGCCAGGAGAAAGTCAAGATCAAACGTCTGGC...GGTAATACCTAGCATGCTGGTAATTCCTTCTTGTTTGTATTTTGGAAAGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 72 bp | CAGTGGCACCTGGTCCCCCTGGGCAGTCGGAGGCACTaGCCAGACAGCCCCGGACGACTTGCCGGTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QWHLVPLGSRRH*PDSPGRLAGGA Trigger: AGCACCACCGGCAAGTCGTCCGGGGCTGTCTGGGCAGTGCCTCCGACTGCCCAGGGGGACCAGGTGCCACTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 72 bp | GCCCAGCTCATTGTGTTGGCGCACCTGCCGGTAGGCTaGCCACAGGGCCAGGCAGTTGGTGGGCAGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: AQLIVLAHLPVG*PQGQAVGGQPH Trigger: GTGGGGCTGCCCACCAACTGCCTGGCCCTGTGGGCAGCCTACCGGCAGGTGCGCCAACACAATGAGCTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CAA 90 bp | TCCCCCTGGGCAGTCGGAGGCACTGCCCAGACAGCCCCGGACGACTaGCCGGTGGTGCTCCTCTTGGAGGTCAAGGGTGTCTCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPWAVGGTAQTAPDD*PVVLLLEVKGVSRV Trigger: CACCCTGGAGACACCCTTGACCTCCAAGAGGAGCACCACCGGCAAGTCGTCCGGGGCTGTCTGGGCAGTGCCTCCGACTGCCCAGGGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 72 bp | CAGCTCCGTGGCCCAGACCACAGAGCTCACAGCCACTaGTGTCTTGACCCGGCGCAGGCGTGCAAAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLRGPDHRAHSH*CLDPAQACKAQ Trigger: CTGCGCTTTGCACGCCTGCGCCGGGTCAAGACAGCAGTGGCTGTGAGCTCTGTGGTCTGGGCCACGGAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | GAGGCACTGCCCAGACAGCCCCGGACGACTTGCCGGTaGTGCTCCTCTTGGAGGTCAAGGGTGTCTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: EALPRQPRTTCR*CSSWRSRVSPG Trigger: CCCTGGAGACACCCTTGACCTCCAAGAGGAGCACCACCGGCAAGTCGTCCGGGGCTGTCTGGGCAGTGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS TCA 72 bp | TGGCCCAGACCACAGAGCTCACAGCCACTGCTGTCTTaGCCCGGCGCAGGCGTGCAAAGCGCAGAGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: WPRPQSSQPLLS*PGAGVQSAEDE Trigger: CTCATCCTCTGCGCTTTGCACGCCTGCGCCGGGTCAAGACAGCAGTGGCTGTGAGCTCTGTGGTCTGGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | CATGGAAGAGCGGTGCTGAATTGGCGCCCAGCTCCGTaGCCCAGACCACAGAGCTCACAGCCACTGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: HGRAVLNWRPAP*PRPQSSQPLLS Trigger: AGACAGCAGTGGCTGTGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTTCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CAA 72 bp | GCTCAAGTTCATCAGGTAGACGCCCAGCTCATTGTGTaGGCGCACCTGCCGGTAGGCTGCCCACAGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AQVHQVDAQLIV*AHLPVGCPQGQ Trigger: CTGGCCCTGTGGGCAGCCTACCGGCAGGTGCGCCAACACAATGAGCTGGGCGTCTACCTGATGAACTTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS TCA 72 bp | ACAGGGCCAGGCAGTTGGTGGGCAGCCCCACCCCGATaGCGAAGATGTAGAGAGATGGTGGGAAGAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: TGPGSWWAAPPR*RRCREMVGRGG Trigger: ACCACCTCTTCCCACCATCTCTCTACATCTTCGTCATCGGGGTGGGGCTGCCCACCAACTGCCTGGCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CAA 90 bp | GTCTGCAATGCTCAAGTTCATCAGGTAGACGCCCAGCTCATTGTGTaGGCGCACCTGCCGGTAGGCTGCCCACAGGGCCAGGCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VCNAQVHQVDAQLIV*AHLPVGCPQGQAVG Trigger: ACCAACTGCCTGGCCCTGTGGGCAGCCTACCGGCAGGTGCGCCAACACAATGAGCTGGGCGTCTACCTGATGAACTTGAGCATTGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | GGGCAGCCCCACCCCGATGACGAAGATGTAGAGAGATaGTGGGAAGAGGTGGTCCACTCGAGAGTCCACATG | + |
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Preference number: 6 (lower is better) Translates to: GQPHPDDEDVER*WEEVVHSRVHM Trigger: CATGTGGACTCTCGAGTGGACCACCTCTTCCCACCATCTCTCTACATCTTCGTCATCGGGGTGGGGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | CACGAAACAGCTCATCATGGAAGAGCGGTGCTGAATTaGCGCCCAGCTCCGTGGCCCAGACCACAGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: HETAHHGRAVLN*RPAPWPRPQSS Trigger: TGAGCTCTGTGGTCTGGGCCACGGAGCTGGGCGCCAATTCAGCACCGCTCTTCCATGATGAGCTGTTTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | CAGCCCCACCCCGATGACGAAGATGTAGAGAGATGGTaGGAAGAGGTGGTCCACTCGAGAGTCCACATGGCA | + |
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Preference number: 6 (lower is better) Translates to: QPHPDDEDVERW*EEVVHSRVHMA Trigger: TGCCATGTGGACTCTCGAGTGGACCACCTCTTCCCACCATCTCTCTACATCTTCGTCATCGGGGTGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 72 bp | GACCCACAGCGGCAAAGTGCAGATGTACAGCAGGTCTaGAATGCTCAAGTTCATCAGGTAGACGCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: DPQRQSADVQQV*NAQVHQVDAQL Trigger: GAGCTGGGCGTCTACCTGATGAACTTGAGCATTGCAGACCTGCTGTACATCTGCACTTTGCCGCTGTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS CCA 72 bp | CGCGGTACAGATTCATCCAGGCCACCCAACGCTCCATaGGGAACTTCTCAAAGCAGAAGGTGTGGTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RGTDSSRPPNAP*GTSQSRRCGCS Trigger: GCTACAACCACACCTTCTGCTTTGAGAAGTTCCCCATGGAGCGTTGGGTGGCCTGGATGAATCTGTACCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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| CDS GCA 72 bp | CATGGTGGAGGAAGTAGTCGACCCACAGCGGCAAAGTaGAGATGTACAGCAGGTCTGCAATGCTCAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HGGGSSRPTAAK*RCTAGLQCSSS Trigger: TGAACTTGAGCATTGCAGACCTGCTGTACATCTGCACTTTGCCGCTGTGGGTCGACTACTTCCTCCACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060225.6 |
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