Pregenerated sensors for GPR39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026343Ensembl transcript IDs: ENSMUST00000027581.7
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCCTCTTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTaGCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTCCTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: HPSLQWAEAQEERQL*LGHQARASHHSPVL Trigger: AAGAACAGGAGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | GGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTaGAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: GKLNSVCISCCNTPL*NGPRPKKRGSSASA Trigger: GGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | CCCTCTGCTTGGCACACTGCTGAAGCTAAAGGAGATGCCAACCCCTaGTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: PSAWHTAEAKGDANP*CLTCLALRLSPSRV Trigger: GACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAGCAGTGTGCCAAGCAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 90 bp | ACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATaGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAG | + |
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Preference number: 1 (lower is better) Translates to: TELRVHQLLQHPSLQ*AEAQEERQLCLGHQ Trigger: CTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | TCTGCTTGGCACACTGCTGAAGCTAAAGGAGATGCCAACCCCTGCTaGCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SAWHTAEAKGDANPC*LTCLALRLSPSRVS Trigger: AGAGACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAGCAGTGTGCCAAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 90 bp | CTGCTGAAGCTAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTaGCCCTTCGTCTCTCACCTTCCCGAGTCTCTTCTGGGTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LLKLKEMPTPAASPV*PFVSHLPESLLGVL Trigger: AAGGACACCCAGAAGAGACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 90 bp | AGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTaGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SLSHCFSWVPVLLFP*ETELRVHQLLQHPS Trigger: AGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR TCA 90 bp | TCATTGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTGGGAAACTaGACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCAATG | + |
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Preference number: 1 (lower is better) Translates to: SLLQLGTSPSVPLGN*TPCASAAATPLFAM Trigger: CATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | GATCATGTACCGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATTaGTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTGGGAAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: DHVPEVVCIVSSLSH*FSWVPVLLFPWETE Trigger: TTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACACGACTTCCGGTACATGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | ACTTCTCTGGGCCTGTGTTATAGGGATCATGTACCGGAAGTCGTGTaGATCGTCAGCAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTC | + |
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Preference number: 1 (lower is better) Translates to: TSLGLCYRDHVPEVV*IVSSLSHCFSWVPV Trigger: GACTGGTACCCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACACGACTTCCGGTACATGATCCCTATAACACAGGCCCAGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 90 bp | AGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTaGACAAATACTTTTGTAAGCTCTGAACCAATTCATTCTGAATTT | + |
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Preference number: 1 (lower is better) Translates to: RESFCSLLSSNARLP*TNTFVSSEPIHSEF Trigger: AAATTCAGAATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGACTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 90 bp | TGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTaGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: WETELRVHQLLQHPS*QWAEAQEERQLCLG Trigger: GCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGTCTCATTGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTGGGAAACGATGCCAACCCCTGCTaGCTCACCTGTCTGGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: QPVSLLQLGTSPSVPLGNDANPC*LTCLAL Trigger: AAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATC...GTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTCCTGTTCTTCAGAGACTGCTGCTaGGTGAAGGTAACTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RGSSASAIRPGLLTTLLFFRDCC*VKVTLL Trigger: AAGCAAAGTTACCTTCACGCAGCAGCAGTCTCTGAA...GAACAGGAGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCATTGAGATACGCATCTaGCTTTCCCAAAGCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: FAMGRGPRREAALPRPSGIEIRI*LSQSLE Trigger: CTCAAGGCTTTGGGAAAGGCAGATGCGTATCTCAAT...GCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTGCCTCCCATCCCAATCTaGTTAACCACCGCCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FPWETELRVHQLLQHPSLPPIPI*LTTAKA Trigger: AGCCTTGGCGGTGGTTAACCAGATTGGGATGGGAGG...CAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTTCTGTGGGAGGAGTTAAGGAAAGGTTATGCACTCAGATTTGGGCACAAGGAGATGCCAACCCCTaGTGCCTCACCTGTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: ALSVGGVKERLCTQIWAQGDANP*CLTCLA Trigger: GGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCC...TTGTGCCCAAATCTGAGTGCATAACCTTTCCTTAACTCCTCCCACAGAAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCTAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTTCCCGAGTCTCTTCTaGGTGTCCTTTTATTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LKLKEMPTPAASPVWPFVFPSLF*VSFYSG Trigger: CCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAA...GACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 90 bp | AGGAGTCACAGTCTATTCAGAGACTGCTGCTGCGTGAAGGTAACTTaGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RSHSLFRDCCCVKVT*LLREGRASFGSRLL Trigger: CAGAAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAGCAGTCTCTGAATAGACTGTGACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | ACCCCACTTCTCTGGGCCTGTGTTATAGGGATCATGTACCGGAAGTCGTGTGCAGTGTGCATCAGCTGCTaGAACACCCCTCTTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: TPLLWACVIGIMYRKSCAVCISC*NTPLCN Trigger: ATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACAC...TGCACACGACTTCCGGTACATGATCCCTATAACACAGGCCCAGAGAAGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGTTATAGGGATCATGTACCGGAAGTCGTGTGCATCGTCAGCAGCCTGTAAACTGAACTCCGTGTaGATCAGCTGCTGCAACACC | + |
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Preference number: 2 (lower is better) Translates to: ACVIGIMYRKSCASSAACKLNSV*ISCCNT Trigger: GGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTT...ACAGGCTGCTGACGATGCACACGACTTCCGGTACATGATCCCTATAACACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGCATGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCCCTTTCCCAAAGCCTTaGGCTTCCATTCTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KKHGAESPDPPIPIWLTTPFPKP*ASILSQ Trigger: CTGGGACAGAATGGAAGCTCAAGGCTTTGGGAAAGG...GGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCATGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCCAGATCAGGAGATAAGAGCCCTTTCTGTGGGAGGAGTTAAGGAAAGGTCTCATTGCTTCAGCTaGGTACCAGTCCTTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HLPDQEIRALSVGGVKERSHCFS*VPVLLF Trigger: GAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGA...CCTTTCCTTAACTCCTCCCACAGAAAGGGCTCTTATCTCCTGATCTGGGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 90 bp | ACTAAAATCTCTGTTGGAACAACATTCACCATAAGTTCTGTGTGTTaGGTGACCTCCATGCCCACCCAAAAGAACTCCCAGACTCCAATA | + |
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Preference number: 2 (lower is better) Translates to: TKISVGTTFTISSVC*VTSMPTQKNSQTPI Trigger: TATTGGAGTCTGGGAGTTCTTTTGGGTGGGCATGGAGGTCACCAAACACACAGAACTTATGGTGAATGTTGTTCCAACAGAGATTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | TCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTGCTaGAACACCCCTCTTTGCAATGGGCCGAGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SPGKLNSVCISC*NTPLCNGPRPK Trigger: CTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | TGTTCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTaGTGCAACACCCCTCTTTGCAATGGGCCGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: CSPGKLNSVCIS*CNTPLCNGPRP Trigger: GGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR TCA 72 bp | CAGCTGGGTACCAGTCCTTCTGTTCCCCTGGGAAACTaGACTCCGTGTGCATCAGCTGCTGCAACACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QLGTSPSVPLGN*TPCASAAATPL Trigger: GAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | CACACTGCTGAAGCTAAAGGAGATGCCAACCCCTGCTaGCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HTAEAKGDANPC*LTCLALRLSPS Trigger: GGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAGCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | TGGCACACTGCTGAAGCTAAAGGAGATGCCAACCCCTaGTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: WHTAEAKGDANP*CLTCLALRLSP Trigger: AGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAGCAGTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | AACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTTaGAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: NSVCISCCNTPL*NGPRPKKRGSS Trigger: AGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | CCGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATTaGTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PEVVCIVSSLSH*FSWVPVLLFPW Trigger: CCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACACGACTTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 72 bp | CTAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTaGCCCTTCGTCTCTCACCTTCCCGAGTCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LKEMPTPAASPV*PFVSHLPESLL Trigger: CAGAAGAGACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGCTAAAGGAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTGCGTGAAGGTAACTTaGCTTTTGCGGGAGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LKLKEMPTPAASPVWPFVCVKVT*LLREGR Trigger: TCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCA...GACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTCCTTTAGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CAA 90 bp | ACCCCACTTCTCTGGGCCTGTGTTATAGGGATCATGTACCGGAAGTCGTGTGCACTGCAACACCCCTCTTaGCAATGGGCCGAGGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TPLLWACVIGIMYRKSCALQHPS*QWAEAQ Trigger: TTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAG...TGCACACGACTTCCGGTACATGATCCCTATAACACAGGCCCAGAGAAGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | GGCCTGTGTTATAGGGATCATGTACCGGAAGTCGTGTaGATCGTCAGCAGCCTGTCTCATTGCTTCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GLCYRDHVPEVV*IVSSLSHCFSW Trigger: CCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACACGACTTCCGGTACATGATCCCTATAACACAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 72 bp | CATTGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTaGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: HCFSWVPVLLFP*ETELRVHQLLQ Trigger: TTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CCA 72 bp | GTGTGCATCGTCAGCAGCCTGTCTCATTGCTTCAGCTaGGTACCAGTCCTTCTGTTCCCCTGGGAAACTGAA | + |
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Preference number: 3 (lower is better) Translates to: VCIVSSLSHCFS*VPVLLFPWETE Trigger: TTCAGTTTCCCAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR-3UTR CAA 90 bp | TCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTGCCTTTCCCAAAGCCTaGAGCTTCCATTCTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SRVSSGCPFILGRQGSLFAFPKA*SFHSVP Trigger: TGGGACAGAATGGAAGCTCAAGGCTTTGGGAAAGGC...AAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | AGAGCCCTTTCTGTGGGAGGAGTTAAGGAAAGGTTATaGACTCAGATTTGGGCACAAAGAGATAGCTGGACT | + |
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Preference number: 3 (lower is better) Translates to: RALSVGGVKERL*TQIWAQRDSWT Trigger: AGTCCAGCTATCTCTTTGTGCCCAAATCTGAGTGCATAACCTTTCCTTAACTCCTCCCACAGAAAGGGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR GCA 72 bp | TTTTGTTCCCTCCTTTCAAGTAACGCAAGATTGCCGTaGACAAATACTTTTGTAAGCTCTGAACCAATTCAT | + |
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Preference number: 3 (lower is better) Translates to: FCSLLSSNARLP*TNTFVSSEPIH Trigger: ATGAATTGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | ATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTGTAGCGCTCAAAGCTaGGGGTCAGCACGTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MGRGPRREAALPRPSGQGCSAQS*GSARAA Trigger: TGCTGCACGTGCTGACCCTCAGCTTTGAGCGCTACA...GCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | CAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTGAGGGGGCTGCGGGCTaGGCTGGTGCTGTCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: QEERQLCLGHQARASHHSEGAAG*AGAVLG Trigger: ACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTC...AGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | TGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGCTCTCCTCACTCTCTaGCTTCCTCAGCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CNGPRPKKRGSSASAIRPALLTL*LPQLEL Trigger: CAGCTCCAGCTGAGGAAGTCAGAGAGTGAGGAGAGC...TGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | TGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCCACCAGGGCGGAGGTaGCCCATACAAAGCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: CQPLLPHLSGPSSLTFPSPPGRR*PIQSQS Trigger: TGATTGGCTTTGTATGGGTCACCTCCGCCCTGGTGG...ACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | CAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTCGGCAGCAGAGCACCTaGCAGAACACCTTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QEERQLCLGHQARASHHSRQQST*QNTFRN Trigger: GTTCCGGAAGGTGTTCTGGCAGGTGCTCTGCTGCCG...AGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTCCTGTTCCAAAGGCCCCAAAGATaGTGGACTGGAAGACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RGSSASAIRPGLLTTLLFQRPQR*WTGRPP Trigger: GGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTG...GAACAGGAGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | CAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTTCTTGGTTGGCATGCTaGAGAGTCAGGCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QEERQLCLGHQARASHHSSWLAC*RVRRQQ Trigger: CTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGA...AGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | GAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCTTCTCTTGGTTGGCATaGTGCAGAGTCAGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EMPTPAASPVWPFVSHLPFSWLA*CRVRRQ Trigger: CTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAA...GGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | GAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCAGACCTCCCAACGGTTaGAGAGGTTCGTGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EMPTPAASPVWPFVSHLPRPPNG*RGSCRW Trigger: CCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCT...GGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 72 bp | GAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTaGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ELRVHQLLQHPS*QWAEAQEERQL Trigger: GAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCAAAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | GATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGATCAGGGGGTTCCAAATaGTGCTGTAGAACTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DANPCCLTCLALRLSPSRSGGSK*CCRTPW Trigger: CCATGGAGTTCTACAGCATCATTTGGAACCCCCTGA...TCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | GAGATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCCCTGCAAGAGTGCCCTaGTTGCTCTTCATTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EMPTPAASPVWPFVSHLPPARVP*LLFIST Trigger: AGTGCTAATGAAGAGCAAGCAGGGCACTCTTGCAGG...GGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | GATGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGAGGTACTCGATACCCATaGCAAAGAGCAAAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DANPCCLTCLALRLSPSRGTRYP*QRAKAV Trigger: CACTGCCTTTGCTCTTTGCCATGGGTATCGAGTACC...TCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | TGCCAACCCCTGCTGCCTCACCTGTCTGGCCCTTCGTCTCTCACCTTCCCGAGTCTGAACAAGCCAAACTaGCCATGTGATCTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CQPLLPHLSGPSSLTFPSLNKPN*PCDLSP Trigger: AGGTGACAGATCACATGGTCAGTTTGGCTTGTTCAG...ACTCGGGAAGGTGAGAGACGAAGGGCCAGACAGGTGAGGCAGCAGGGGTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | AAAGCATGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCGCTCAGGACTCAAGGGCTaGGGCTTAGCCTCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAWSRKSRPSHPNLVNHRSGLKG*GLASPG Trigger: GCCTGGAGAGGCTAAGCCCCAGCCCTTGAGTCCTGA...GCGGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCATGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 72 bp | ACCGGAAGTCGTGTGCATCGTCAGCAGCCTGTCTCATaGCTTCAGCTGGGTACCAGTCCTTCTGTTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGSRVHRQQPVS*LQLGTSPSVPL Trigger: CAGGGGAACAGAAGGACTGGTACCCAGCTGAAGCAATGAGACAGGCTGCTGACGATGCACACGACTTCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | CTGCTGCGTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCGCCAAACTGACCATGTaGTCTGTCACCTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLREGNFAFAGGESQFRLAKLTM*SVTSFC Trigger: GCAGAAGGAGGTGACAGATCACATGGTCAGTTTGGC...GAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | TGCAATGGGCCGAGGCCCAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCATGCTGTAGAACTCCATaGGCATGCCAATCAAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNGPRPKKRGSSASAIRPCCRTP*ACQSKR Trigger: TCTTTTTGATTGGCATGCCCATGGAGTTCTACAGCA...TGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTGGGCCTCGGCCCATTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | AAAGCATGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCGCGGCGTTTCTCTTGGTTaGCATGCTGCAGAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAWSRKSRPSHPNLVNHRGVSLG*HAAESG Trigger: GCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCC...GCGGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCATGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTCCTGTTCAAAGACCAAGATATCTaGACAAGCCAAACTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSSASAIRPGLLTTLLFKDQDI*TSQTDH Trigger: ATGGTCAGTTTGGCTTGTTCAGATATCTTGGTCTTT...GAACAGGAGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | AAAAAGCATGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCGCACGTGCAGCAGTGTaGCGTAGCTGCACGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKHGAESPDPPIPIWLTTARAAV*RSCTSQ Trigger: TTGAGACGTGCAGCTACGCCACACTGCTGCACGTGC...GGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCATGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 72 bp | AGTCTATTCAGAGACTGCTGCTGCGTGAAGGTAACTTaGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFRDCCCVKVT*LLREGRASFGS Trigger: TGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAGCAGTCTCTGAATAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | TGTTCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTCAGGAGGATCATGTATaGCCTGAAGTACGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSPGKLNSVCISCCNTPLQEDHV*PEVRSG Trigger: ACCAGAACGTACTTCAGGGCATACATGATCCTCCTG...AAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | CTAGCCTGGAAGAACCAGCCCTTAGAAGTCATTGAGATACGCATCTGCCTTTCCATGATCCGTCGGATCTaGTTGGGCATCCAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: LAWKNQPLEVIEIRICLSMIRRI*LGIQHT Trigger: CGTGTGTTGGATGCCCAATCAGATCCGACGGATCAT...GGAAAGGCAGATGCGTATCTCAATGACTTCTAAGGGCTGGTTCTTCCAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | AAAGCATGGAGCAGAAAGTCCAGACCCTCCCATCCCAATCTGGTTAACCACCGCGGCTTGGCCTCAGTCTaGAAAGTGCTTAAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KAWSRKSRPSHPNLVNHRGLASV*KVLKKT Trigger: GGTTTTCTTAAGCACTTTTCAGACTGAGGCCAAGCC...GCGGTGGTTAACCAGATTGGGATGGGAGGGTCTGGACTTTCTGCTCCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | CTGCTGCGTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAGAACTCCATGGGCATaGCAATCAAAAAGACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLREGNFAFAGGESQFRLRTPWA*QSKRPR Trigger: TCTTGGTCTTTTTGATTGGCATGCCCATGGAGTTCT...GAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCACGCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | CATCTCCCAGATCAGGAGATAAGAGCCCTTTCTGTGGGAGGAGTTAAGGAAAGGGTCATGTTTGGGTTTTaGTGCAGCCATGATCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLPDQEIRALSVGGVKERVMFGF*CSHDPS Trigger: CGACGGATCATGGCTGCAGCAAAACCCAAACATGAC...CCTTTCCTTAACTCCTCCCACAGAAAGGGCTCTTATCTCCTGATCTGGGAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR TCA 90 bp | TGTTCCCCTGGGAAACTGAACTCCGTGTGCATCAGCTGCTGCAACACCCCTCTTACACTGCTTTATACTTaGAGGGATGACAAATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSPGKLNSVCISCCNTPLTLLYT*RDDKWQ Trigger: TTGCCATTTGTCATCCCTTCAAGTATAAAGCAGTGT...AAGAGGGGTGTTGCAGCAGCTGATGCACACGGAGTTCAGTTTCCCAGGGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | TCACCTTCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTTCAAAGAGGAACGTGTaGAGCTTACAGGACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSRVSSGCPFILGRQGSSKRNV*SLQDRA Trigger: TGCTCTGTCCTGTAAGCTCCACACGTTCCTCTTTGA...ACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGAAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | TTTATTCTGGGTAGACAAGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAATCTGACTTCCTCAGCTaGAGCTGTGGCCCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FILGRQGSLFVPSFQVTQSDFLS*SCGPVP Trigger: AGGGACCGGGCCACAGCTCCAGCTGAGGAAGTCAGA...TTGCGTTACTTGAAAGGAGGGAACAAAAAGACTCCCTTGTCTACCCAGAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 72 bp | TCTGTTGGAACAACATTCACCATAAGTTCTGTGTGTTaGGTGACCTCCATGCCCACCCAAAAGAACTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGTTFTISSVC*VTSMPTQKNSQ Trigger: CTGGGAGTTCTTTTGGGTGGGCATGGAGGTCACCAAACACACAGAACTTATGGTGAATGTTGTTCCAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CCA 90 bp | TCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTAGAGGTTCGTGCAGATaGACATATTGGAGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVSSGCPFILGRQGSLFRGSCR*TYWSFQ Trigger: CTGGAAACTCCAATATGTCCATCTGCACGAACCTCT...AAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | TTTATTCTGGGTAGACAAGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGCGAGGTCCAGACACTaGTTTATACTTGAAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FILGRQGSLFVPSFQVTQARSRH*FILEGM Trigger: CATCCCTTCAAGTATAAAGCAGTGTCTGGACCTCGC...TTGCGTTACTTGAAAGGAGGGAACAAAAAGACTCCCTTGTCTACCCAGAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR GCA 90 bp | TTTATTCTGGGTAGACAAGGGAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGGTTGGAGAGGTTCGTaGAGATGGACATATTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FILGRQGSLFVPSFQVTQGWRGS*RWTYWS Trigger: ACTCCAATATGTCCATCTGCACGAACCTCTCCAACC...TTGCGTTACTTGAAAGGAGGGAACAAAAAGACTCCCTTGTCTACCCAGAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| 3UTR CAA 72 bp | GAGTCTTTTTGTTCCCTCCTTTCAAGTAACGCAAGATaGCCGTGCACAAATACTTTTGTAAGCTCTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ESFCSLLSSNAR*PCTNTFVSSEP Trigger: TGGTTCAGAGCTTACAAAAGTATTTGTGCACGGCAATCTTGCGTTACTTGAAAGGAGGGAACAAAAAGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 90 bp | CGGGCTGAGCTGGTGCTGTCCTTGGTGGAGATGAAGCGGGCACGCTaGCGTTTCTCTTGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAELVLSLVEMKRAR*RFSWLACCRVRRQQ Trigger: CTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | GTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATGCTaGAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VEMKRARWRFSWLAC*RVRRQQSTCQNTFR Trigger: CCGGAAGGTGTTCTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 90 bp | GTGCTGTCCTTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTaGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSLVEMKRARWRFS*LACCRVRRQQSTCQ Trigger: CTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | TTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATaGTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAACACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVEMKRARWRFSWLA*CRVRRQQSTCQNTF Trigger: GAAGGTGTTCTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | CGATACCCATGGCAAAGAGCAAAGGCAGTGCCACCAGGGCGGAGGTaGCCCATACAAAGCCAATCAGCAGTTTCACCTGGCGAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RYPWQRAKAVPPGRR*PIQSQSAVSPGEVQ Trigger: CTGGACCTCGCCAGGTGAAACTGCTGATTGGCTTTGTATGGGTCACCTCCGCCCTGGTGGCACTGCCTTTGCTCTTTGCCATGGGTATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | GAATATGATGGTCTGTCTTCTTGCTGTCCGGCTCTCCTCACTCTCTaGCTTCCTCAGCTGGAGCTGTGGCCCGGTCCCTGCAAGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EYDGLSSCCPALLTL*LPQLELWPGPCKSA Trigger: GGCACTCTTGCAGGGACCGGGCCACAGCTCCAGCTGAGGAAGTCAGAGAGTGAGGAGAGCCGGACAGCAAGAAGACAGACCATCATATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | CCACAGACGCCAGGACCACCAGGTAAACAGCAAAGGCCCCAAAGATaGTGGACTGGAAGACCTCCCAACGGTTGGAGAGGTTCGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PQTPGPPGKQQRPQR*WTGRPPNGWRGSCR Trigger: TCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTGCTGTTTACCTGGTGGTCCTGGCGTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 90 bp | GGAAGACCTCCCAACGGTTGGAGAGGTTCGTGCAGATGGACATATTaGAGTTTCCAGGTTCATCGTGGTGGCGGGTGCGAGAGAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRPPNGWRGSCRWTY*SFQVHRGGGCERGC Trigger: GCAACCTCTCTCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 90 bp | TGCTGGACTGGAAGACCTCCCAACGGTTGGAGAGGTTCGTGCAGATaGACATATTGGAGTTTCCAGGTTCATCGTGGTGGCGGGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CWTGRPPNGWRGSCR*TYWSFQVHRGGGCE Trigger: CTCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAGAGGCAGCTCTGCCTCGGCCATCAGGCCAGGGCTTCTCACCACTCTGCAAGAGTGCCCTGCTaGCTCTTCATTAGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QEERQLCLGHQARASHHSARVPC*LFISTF Trigger: GAAAGTGCTAATGAAGAGCAAGCAGGGCACTCTTGC...AGAGTGGTGAGAAGCCCTGGCCTGATGGCCGAGGCAGAGCTGCCTCTCTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | TCATCGTGGTGGCGGGTGCGAGAGAGGTTGCAGTTGAGTCCCTTGTaGGTGGGTACGTTTACCAGAGGGTACTCGATACCCATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSWWRVRERLQLSPL*VGTFTRGYSIPMAK Trigger: CTTTGCCATGGGTATCGAGTACCCTCTGGTAAACGTACCCACTCACAAGGGACTCAACTGCAACCTCTCTCGCACCCGCCACCACGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | AGTTTCCAGGTTCATCGTGGTGGCGGGTGCGAGAGAGGTTGCAGTTaGGTCCCTTGTGAGTGGGTACGTTTACCAGAGGGTACTCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SFQVHRGGGCERGCS*VPCEWVRLPEGTRY Trigger: GTATCGAGTACCCTCTGGTAAACGTACCCACTCACAAGGGACTCAACTGCAACCTCTCTCGCACCCGCCACCACGATGAACCTGGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | CAAAGATGCTGGACTGGAAGACCTCCCAACGGTTGGAGAGGTTCGTaGAGATGGACATATTGGAGTTTCCAGGTTCATCGTGGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRCWTGRPPNGWRGS*RWTYWSFQVHRGGG Trigger: CCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | GTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTTGGCGTTTCTCTTGGTaGGCATGCTGCAGAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKVTLLLREGRASFGSRLWRFSW*ACCRVR Trigger: CCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCA...AAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | GTCCAGTCATGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTaGTTGGGCATCCAACACACGGCCAACGTCACCACAATCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VQSCLGFAAAMIRRI*LGIQHTANVTTISL Trigger: GAGACTGATTGTGGTGACGTTGGCCGTGTGTTGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | GTATGCCCTGAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTGCTaGAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACACGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCPEVRSGPVMFGFC*SHDPSDLIGHPTHG Trigger: GCCGTGTGTTGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGTACTTCAGGGCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | GCCCTTTCTGTGGGAGGAGTTAAGGAAAGGTTATGCACTCAGATTTGGGCACAAGAGCTGGTGCTGTCCTaGGTGGAGATGAAGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALSVGGVKERLCTQIWAQELVLS*VEMKRA Trigger: TGCCCGCTTCATCTCCACCAAGGACAGCACCAGCTC...TTGTGCCCAAATCTGAGTGCATAACCTTTCCTTAACTCCTCCCACAGAAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | TCTCTGACTTCCTCAGCTGGAGCTGTGGCCCGGTCCCTGCAAGAGTaGCCTGCTTGCTCTTCATTAGCACTTTCATCATATTCCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: SLTSSAGAVARSLQE*PACSSLALSSYSNT Trigger: TGTGTTGGAATATGATGAAAGTGCTAATGAAGAGCAAGCAGGGCACTCTTGCAGGGACCGGGCCACAGCTCCAGCTGAGGAAGTCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 90 bp | CAGCAAAGGCCCCAAAGATGCTGGACTGGAAGACCTCCCAACGGTTaGAGAGGTTCGTGCAGATGGACATATTGGAGTTTCCAGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QQRPQRCWTGRPPNG*RGSCRWTYWSFQVH Trigger: ATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | GACTTCCTCAGCTGGAGCTGTGGCCCGGTCCCTGCAAGAGTGCCCTaGTTGCTCTTCATTAGCACTTTCATCATATTCCAACACATGAAA | + |
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Preference number: 5 (lower is better) Translates to: DFLSWSCGPVPARVP*LLFISTFIIFQHMK Trigger: TTTCATGTGTTGGAATATGATGAAAGTGCTAATGAAGAGCAAGCAGGGCACTCTTGCAGGGACCGGGCCACAGCTCCAGCTGAGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 90 bp | CATGTATGCCCTGAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTaGTGCAGCCATGATCCGTCGGATCTGATTGGGCATCCAACACAC | + |
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Preference number: 5 (lower is better) Translates to: HVCPEVRSGPVMFGF*CSHDPSDLIGHPTH Trigger: GTGTGTTGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGTACTTCAGGGCATACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | GTGAAGGTAACTTTGCTTTTGCGGGAGGGGAGAGCCAGTTTCGGCTCAAGGCTTAAGATGAGGGTGATTTaGATCCAAGTGGCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: VKVTLLLREGRASFGSRLKMRVI*IQVATS Trigger: TGAGGTGGCCACTTGGATCAAAATCACCCTCATCTT...AAGCCTTGAGCCGAAACTGGCTCTCCCCTCCCGCAAAAGCAAAGTTACCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | TCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTGTTCCCTCCGTGGACCCAGCTGGTTaGGTCTCTGAGCCAGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSGCPFILGRQGSLFVPSVDPAG*VSEPVC Trigger: ACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCAC...GGAGGGAACAAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | GTGATTTTGATCCAAGTGGCCACCTCAAATTCAGGAACATGGCTGTaGTCGATGACACGGGAGCAGATGTGGTTGGAGCCACTGGATGAA | + |
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Preference number: 5 (lower is better) Translates to: VILIQVATSNSGTWL*SMTREQMWLEPLDE Trigger: TTCATCCAGTGGCTCCAACCACATCTGCTCCCGTGTCATCGATCACAGCCATGTTCCTGAATTTGAGGTGGCCACTTGGATCAAAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 90 bp | GGTAGAAGAAGGTATCAGAGAAGGGCAGGAGGATCATGTATGCCCTaGAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GRRRYQRRAGGSCMP*STFWSSHVWVLLQP Trigger: TGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGTACTTCAGGGCATACATGATCCTCCTGCCCTTCTCTGATACCTTCTTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | TCCCGAGTCTCTTCTGGGTGTCCTTTTATTCTGGGTAGACAAGGGAGTCTTTTTGTGCAGATGGACATATaGGAGTTTCCAGGTTCATCG | + |
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Preference number: 5 (lower is better) Translates to: SRVSSGCPFILGRQGSLFVQMDI*EFPGSS Trigger: CGATGAACCTGGAAACTCCAATATGTCCATCTGCAC...AAAAAGACTCCCTTGTCTACCCAGAATAAAAGGACACCCAGAAGAGACTCGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS-3UTR CAA 90 bp | CATCTCCCAGATCAGGAGATAAGAGCCCTTTCTGTGGGAGGAGTTAAGGAAAGGGTGCTTAAGAAAACCTaGTTAGTTCTCCTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLPDQEIRALSVGGVKERVLKKT*LVLLEE Trigger: TTCCTCCAGGAGAACTAACAAGGTTTTCTTAAGCAC...CCTTTCCTTAACTCCTCCCACAGAAAGGGCTCTTATCTCCTGATCTGGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 90 bp | GGTGCTGTCCTTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTaGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GAVLGGDEAGTLAFL*VGMLQSQAAAEHLP Trigger: TGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | AAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATGCTaGAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: KRARWRFSWLAC*RVRRQQSTCQN Trigger: GTTCTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | ATGAAGCGGGCACGCTGGCGTTTCTCTTGGTTGGCATaGTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MKRARWRFSWLA*CRVRRQQSTCQ Trigger: CTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | GTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTaGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: VEMKRARWRFSW*ACCRVRRQQST Trigger: GGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | AAGATGAGGGGGCTGCGGGCTGAGCTGGTGCTGTCCTaGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KMRGLRAELVLS*VEMKRARWRFS Trigger: AGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAGCACCAGCTCAGCCCGCAGCCCCCTCATCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 90 bp | CTGTCCTTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTGGTaGGCATGCTGCAGAGTCAGGCGGCAGCAGAGCACCTGCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LSLVEMKRARWRFSW*ACCRVRRQQSTCQN Trigger: GTTCTGGCAGGTGCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | TTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTTaGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVEMKRARWRFS*LACCRVRRQQS Trigger: GCTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | CTTGGTGGAGATGAAGCGGGCACGCTGGCGTTTCTCTaGGTTGGCATGCTGCAGAGTCAGGCGGCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGGDEAGTLAFL*VGMLQSQAAAE Trigger: CTCTGCTGCCGCCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | CTGGTGCTGTCCTTGGTGGAGATGAAGCGGGCACGCTaGCGTTTCTCTTGGTTGGCATGCTGCAGAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVLSLVEMKRAR*RFSWLACCRVR Trigger: CCTGACTCTGCAGCATGCCAACCAAGAGAAACGCCAGCGTGCCCGCTTCATCTCCACCAAGGACAGCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | GAGTGGGTACGTTTACCAGAGGGTACTCGATACCCATaGCAAAGAGCAAAGGCAGTGCCACCAGGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EWVRLPEGTRYP*QRAKAVPPGRR Trigger: CCTCCGCCCTGGTGGCACTGCCTTTGCTCTTTGCCATGGGTATCGAGTACCCTCTGGTAAACGTACCCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | TGGCAAAGAGCAAAGGCAGTGCCACCAGGGCGGAGGTaGCCCATACAAAGCCAATCAGCAGTTTCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: WQRAKAVPPGRR*PIQSQSAVSPG Trigger: GCCAGGTGAAACTGCTGATTGGCTTTGTATGGGTCACCTCCGCCCTGGTGGCACTGCCTTTGCTCTTTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | GTTCATCGTGGTGGCGGGTGCGAGAGAGGTTGCAGTTaGGTCCCTTGTGAGTGGGTACGTTTACCAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VHRGGGCERGCS*VPCEWVRLPEG Trigger: ACCCTCTGGTAAACGTACCCACTCACAAGGGACTCAACTGCAACCTCTCTCGCACCCGCCACCACGATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | CCAGGACCACCAGGTAAACAGCAAAGGCCCCAAAGATaGTGGACTGGAAGACCTCCCAACGGTTGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PGPPGKQQRPQR*WTGRPPNGWRG Trigger: ACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTGCTGTTTACCTGGTGGTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | GGACCACCAGGTAAACAGCAAAGGCCCCAAAGATGCTaGACTGGAAGACCTCCCAACGGTTGGAGAGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: GPPGKQQRPQRC*TGRPPNGWRGS Trigger: CGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTGCTGTTTACCTGGTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 90 bp | TGGAAGACCTCCCAACGGTTGGAGAGGTTCGTGCAGATGGACATATaGGAGTTTCCAGGTTCATCGTGGTGGCGGGTGCGAGAGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WKTSQRLERFVQMDI*EFPGSSWWRVRERL Trigger: CAACCTCTCTCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | GTGCAGATGGACATATTGGAGTTTCCAGGTTCATCGTaGTGGCGGGTGCGAGAGAGGTTGCAGTTGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VQMDILEFPGSS*WRVRERLQLSP Trigger: GGGACTCAACTGCAACCTCTCTCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | TCCCAACGGTTGGAGAGGTTCGTGCAGATGGACATATaGGAGTTTCCAGGTTCATCGTGGTGGCGGGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: SQRLERFVQMDI*EFPGSSWWRVR Trigger: TCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 90 bp | ACTTCCTGCTCCTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTaGGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCAAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TSCSCKLFSGVDPAG*VSEPVCGDSGLKGW Trigger: CCAGCCCTTGAGTCCTGAGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGGAGCAGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | TGGCCACCTCAAATTCAGGAACATGGCTGTGATCGATaGCACGGGAGCAGATGTGGTTGGAGCCACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: WPPQIQEHGCDR*HGSRCGWSHWM Trigger: CATCCAGTGGCTCCAACCACATCTGCTCCCGTGTCATCGATCACAGCCATGTTCCTGAATTTGAGGTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | TGTTTGGGTTTTGCTGCAGCCATGATCCGTCGGATCTaGTTGGGCATCCAACACACGGCCAACGTCACCACA | + |
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Preference number: 6 (lower is better) Translates to: CLGFAAAMIRRI*LGIQHTANVTT Trigger: TGTGGTGACGTTGGCCGTGTGTTGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | CAGATGGACATATTGGAGTTTCCAGGTTCATCGTGGTaGCGGGTGCGAGAGAGGTTGCAGTTGAGTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QMDILEFPGSSW*RVRERLQLSPL Trigger: CAAGGGACTCAACTGCAACCTCTCTCGCACCCGCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | GGAAGACCTCCCAACGGTTGGAGAGGTTCGTGCAGATaGACATATTGGAGTTTCCAGGTTCATCGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRPPNGWRGSCR*TYWSFQVHRGG Trigger: GCCACCACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | ATCCAAGTGGCCACCTCAAATTCAGGAACATGGCTGTaGTCGATGACACGGGAGCAGATGTGGTTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IQVATSNSGTWL*SMTREQMWLEP Trigger: TGGCTCCAACCACATCTGCTCCCGTGTCATCGATCACAGCCATGTTCCTGAATTTGAGGTGGCCACTTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | ACACGGCCAACGTCACCACAATCAGTCTCAGGAATATaGTGGTCTGTCTTCTTGCTGTCCGGCTCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: TRPTSPQSVSGI*WSVFLLSGSPH Trigger: GTGAGGAGAGCCGGACAGCAAGAAGACAGACCATCATATTCCTGAGACTGATTGTGGTGACGTTGGCCGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | TTCTGGTCCAGTCATGTTTGGGTTTTGCTGCAGCCATaGTCCGTCGGATCTGATTGGGCATCCAACACACGG | + |
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Preference number: 6 (lower is better) Translates to: FWSSHVWVLLQP*SVGSDWASNTR Trigger: CCGTGTGTTGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | AGCTGGAGCTGTGGCCCGGTCCCTGCAAGAGTGCCCTaGTTGCTCTTCATTAGCACTTTCATCATATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SWSCGPVPARVP*LLFISTFIIFQ Trigger: TTGGAATATGATGAAAGTGCTAATGAAGAGCAAGCAGGGCACTCTTGCAGGGACCGGGCCACAGCTCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | CCCCAAAGATGCTGGACTGGAAGACCTCCCAACGGTTaGAGAGGTTCGTGCAGATGGACATATTGGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PQRCWTGRPPNG*RGSCRWTYWSF Trigger: GAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CCA 72 bp | CCTGTAAACTATTTTCTGGGGTGGACCCAGCTGGTTTaGTCTCTGAGCCAGTCTGTGGTGACTCAGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: PVNYFLGWTQLV*SLSQSVVTQDS Trigger: TGAGTCCTGAGTCACCACAGACTGGCTCAGAGACCAAACCAGCTGGGTCCACCCCAGAAAATAGTTTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | GCCCCAAAGATGCTGGACTGGAAGACCTCCCAACGGTaGGAGAGGTTCGTGCAGATGGACATATTGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: APKMLDWKTSQR*ERFVQMDILEF Trigger: AAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 90 bp | ACAGCAAAGGCCCCAAAGATGCTGGACTGGAAGACCTCCCAACGGTaGGAGAGGTTCGTGCAGATGGACATATTGGAGTTTCCAGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TAKAPKMLDWKTSQR*ERFVQMDILEFPGS Trigger: TGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCAGCATCTTTGGGGCCTTTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | TGGACTGGAAGACCTCCCAACGGTTGGAGAGGTTCGTaGAGATGGACATATTGGAGTTTCCAGGTTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: WTGRPPNGWRGS*RWTYWSFQVHR Trigger: ACGATGAACCTGGAAACTCCAATATGTCCATCTGCACGAACCTCTCCAACCGTTGGGAGGTCTTCCAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | GAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTGCTaGAGCCATGATCCGTCGGATCTGATTGGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: EVRSGPVMFGFC*SHDPSDLIGHP Trigger: TGGATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGTACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | CCTGAAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTaGTGCAGCCATGATCCGTCGGATCTGATTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PEVRSGPVMFGF*CSHDPSDLIGH Trigger: ATGCCCAATCAGATCCGACGGATCATGGCTGCAGCAAAACCCAAACATGACTGGACCAGAACGTACTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS GCA 72 bp | GAAGAAGGTATCAGAGAAGGGCAGGAGGATCATGTATaGCCTGAAGTACGTTCTGGTCCAGTCATGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: EEGIREGQEDHV*PEVRSGPVMFG Trigger: CCCAAACATGACTGGACCAGAACGTACTTCAGGGCATACATGATCCTCCTGCCCTTCTCTGATACCTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS CAA 72 bp | TTCTGCAATACCTGCGTAACCCTGATGGTGACGCTGTaGCCCAAGATGCCTACCACAAAGATGATCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: FCNTCVTLMVTL*PKMPTTKMIRY Trigger: GTACCTGATCATCTTTGTGGTAGGCATCTTGGGCAACAGCGTCACCATCAGGGTTACGCAGGTATTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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| CDS TCA 72 bp | AGGTATCAGAGAAGGGCAGGAGGATCATGTATGCCCTaGAGTACGTTCTGGTCCAGTCATGTTTGGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RYQRRAGGSCMP*STFWSSHVWVL Trigger: CAAAACCCAAACATGACTGGACCAGAACGTACTTCAGGGCATACATGATCCTCCTGCCCTTCTCTGATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027581.7 |
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