Pregenerated sensors for GPR37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039904Ensembl transcript IDs: ENSMUST00000054867.8, ENSMUST00000200812.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCCATCTCATCTAGACATGTAACACACATGCCAAGCTCCATGTaGTCAACTGAATGGGCAGGGTTAGATTTGGGGGTGGGGGAATTT | + |
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Preference number: 1 (lower is better) Translates to: SAISSRHVTHMPSSM*STEWAGLDLGVGEF Trigger: AAATTCCCCCACCCCCAAATCTAACCCTGCCCATTCAGTTGAGCACATGGAGCTTGGCATGTGTGTTACATGTCTAGATGAGATGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 90 bp | GAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATaGCAAGTACACTGTTTCTCGGCTTTCAGTCAGCCTATAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: EPYNFRGYCSVDRIR*QVHCFSAFSQPIVP Trigger: AGGAACTATAGGCTGACTGAAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 90 bp | TTCAGTCAGCCTATAGTTCCTCCTGGGAACACCTGTGCCTCCATGTaGCAGATCAAAGGTACCTGTAAAATACAAAGAAAGAGAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: FSQPIVPPGNTCASM*QIKGTCKIQRKRTL Trigger: GAGAGTTCTCTTTCTTTGTATTTTACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAGGAACTATAGGCTGACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 90 bp | CACAGGCATTCAACCACCCACATTTTCTTGAAACTTAAAAGAAATTaGTTTGTCTCCAGGCCAGATTCTGCCATCTCATCTAGACATGTA | + |
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Preference number: 1 (lower is better) Translates to: HRHSTTHIFLKLKRN*FVSRPDSAISSRHV Trigger: TACATGTCTAGATGAGATGGCAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAAGTTTCAAGAAAATGTGGGTGGTTGAATGCCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR TCA 90 bp | CATTCCCACACCAATGTTTTCAAATGTCTTCCTGCTGTAGAGTTCTaGTATTTATCTATAACAACAGTACTCTTATTAGATGGCTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: HSHTNVFKCLPAVEF*YLSITTVLLLDGFS Trigger: ACTGAAGCCATCTAATAAGAGTACTGTTGTTATAGATAAATATCAGAACTCTACAGCAGGAAGACATTTGAAAACATTGGTGTGGGAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGAGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGCCTATAGTTCCTCCTaGGAACACCTGTGCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: NSEHCTYEPYNFRGYCSVAYSSS*EHLCLH Trigger: ATGGAGGCACAGGTGTTCCCAGGAGGAACTATAGGC...CACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCTCTGAATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAAGCCAGTTTTAAACTGTaGATAGGACCAGCAATTGTG | + |
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Preference number: 2 (lower is better) Translates to: STAHMSHTTSEATVLWTEASFKL*IGPAIV Trigger: CACAATTGCTGGTCCTATGCACAGTTTAAAACTGGC...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCATGCTGCCCCACCACATaGGAGAAGTGGGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NKQIRFYLGHPGLNNEVACCPTT*EKWEEE Trigger: TTCTTCCTCCCACTTCTCCCATGTGGTGGGGCAGCA...TGCCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR-3UTR GCA 90 bp | AAATTAGTTGAGTTGACTCTCTTAAGTTTTCAATCACTGCATTTGAGTGGCGTAATGCCAAGCTCCATGTaGTCAACTGAATGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KLVELTLLSFQSLHLSGVMPSSM*STEWAG Trigger: CCCTGCCCATTCAGTTGAGCACATGGAGCTTGGCAT...TACGCCACTCAAATGCAGTGATTGAAAACTTAAGAGAGTCAACTCAACTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGTACTTCCAATCACAACTCAAACACAAAATAACTAGCAAAATCCCGGGCATGTCTTCCTCTACTTaGTTTTCAAAATGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TMYFQSQLKHKITSKIPGMSSST*FSKCVH Trigger: ATGCACACATTTTGAAAAGCAAGTAGAGGAAGACAT...GCCCGGGATTTTGCTAGTTATTTTGTGTTTGAGTTGTGATTGGAAGTACATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 72 bp | ACTCATCCATCTGCCTGCTCTCCAGCCAGGCTTCCATaGTGCCCCACCACATGGGAGAAGTGGGAGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: THPSACSPARLP*CPTTWEKWEEE Trigger: TTCTTCCTCCCACTTCTCCCATGTGGTGGGGCAGCATGGAAGCCTGGCTGGAGAGCAGGCAGATGGATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR GCA 72 bp | AGATTTGGAGGTAAAAGTCTCACTCATCCATCTGCCTaGTCTCCAGCCAGGCTTCCATGCTGCCCCACCACA | + |
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Preference number: 3 (lower is better) Translates to: RFGGKSLTHPSA*SPARLPCCPTT Trigger: TGTGGTGGGGCAGCATGGAAGCCTGGCTGGAGAGCAGGCAGATGGATGAGTGAGACTTTTACCTCCAAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR TCA 72 bp | ACATGTAACACACATGCCAAGCTCCATGTGCTCAACTaGATGGGCAGGGTTAGATTTGGGGGTGGGGGAATT | + |
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Preference number: 3 (lower is better) Translates to: TCNTHAKLHVLN*MGRVRFGGGGI Trigger: AATTCCCCCACCCCCAAATCTAACCCTGCCCATTCAGTTGAGCACATGGAGCTTGGCATGTGTGTTACATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 72 bp | TCATCTAGACATGTAACACACATGCCAAGCTCCATGTaGTCAACTGAATGGGCAGGGTTAGATTTGGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: SSRHVTHMPSSM*STEWAGLDLGV Trigger: CACCCCCAAATCTAACCCTGCCCATTCAGTTGAGCACATGGAGCTTGGCATGTGTGTTACATGTCTAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 72 bp | AACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATaGCAAGTACACTGTTTCTCGGCTTTCAGTCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: NFRGYCSVDRIR*QVHCFSAFSQP Trigger: AGGCTGACTGAAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR GCA 72 bp | CCTATAGTTCCTCCTGGGAACACCTGTGCCTCCATGTaGCAGATCAAAGGTACCTGTAAAATACAAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PIVPPGNTCASM*QIKGTCKIQRK Trigger: CTTTCTTTGTATTTTACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAGGAACTATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR CCA 72 bp | CATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTaGACAGAATCAGATGCCAAGTACACTGTTTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: HMSHTTSEATVL*TESDAKYTVSR Trigger: CCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR TCA 72 bp | CAAGAAGGACTACTAGAATTCAGAGCACTGCACATATaGGCCATACAACTTCAGAGGCTACTGTTCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: QEGLLEFRALHI*AIQLQRLLFCG Trigger: TCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCTCTGAATTCTAGTAGTCCTTCTTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTaGGCATTAGCTACTGATTATTCTTTCAACTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVFLL*ALATDYSFNSY Trigger: GTAGGAGTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCAAAATGTGTGCATaGTTCCCCTGTAAGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: GRKHCANIIGLVLLKAQAFKMCA*FPCKEK Trigger: TTTTTCCTTACAGGGGAACAATGCACACATTTTGAA...TGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATTTAATCCATGAAGGTTaGAGAGAGACCTTTAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVFLLWALATDYLIHEG*RETFKS Trigger: TGACTTAAAGGTCTCTCTCAAACCTTCATGGATTAA...ATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR GCA 72 bp | TCAACCACCCACATTTTCTTGAAACTTAAAAGAAATTaGTTTGTCTCCAGGCCAGATTCTGCCATCTCATCT | + |
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Preference number: 3 (lower is better) Translates to: STTHIFLKLKRN*FVSRPDSAISS Trigger: AGATGAGATGGCAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAAGTTTCAAGAAAATGTGGGTGGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR CAA 90 bp | AACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCAATGACAGTATTTCCTTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: NKQIRFYLGHPGLNNEVAMTVFP*CVCVCV Trigger: CACACACACACACACACACAAAGGAAATACTGTCAT...TGCCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR TCA 72 bp | GTGGAAAACAAGACATTCCATGAACATCATAAGTCATaGCAGTATTTCCTTTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VENKTFHEHHKS*QYFLCVCVCVC Trigger: ACACACACACACACACACACAAAGGAAATACTGTCATGACTTATGATGTTCATGGAATGTCTTGTTTTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR CCA 72 bp | TATGAATTTGAGGGAGTTGGAAGGCGAAAGGAGTGCTaGAAATCATTTGAATGGAGTACTTCTAAGAAATTC | + |
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Preference number: 3 (lower is better) Translates to: YEFEGVGRRKEC*KSFEWSTSKKF Trigger: GAATTTCTTAGAAGTACTCCATTCAAATGATTTCCAGCACTCCTTTCGCCTTCCAACTCCCTCAAATTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR CAA 90 bp | AAATTAGTTGAGTTGACTCTCTTAAGTTTTCAATCACTGCATTTGAGTGGCGTATTAAAAGAAATTGCTTaGTCTCCAGGCCAGATTCTG | + |
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Preference number: 3 (lower is better) Translates to: KLVELTLLSFQSLHLSGVLKEIA*SPGQIL Trigger: CAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAA...TACGCCACTCAAATGCAGTGATTGAAAACTTAAGAGAGTCAACTCAACTAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| 3UTR-3UTR CAA 90 bp | AAAACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCCAAATCAAAGCAGTTaGTATGTACACACATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: KTNKSDFIWVTQVLTMKWPNQSS*YVHTLQ Trigger: TTGCAATGTGTGTACATACAAACTGCTTTGATTTGG...CCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| 3UTR TCA 72 bp | GTACTCTTATTAGATGGCTTCAGTGAATATTCACCATaGCTTTACACAAGTCTTCTGTATAGCTTTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VLLLDGFSEYSP*LYTSLLYSFLV Trigger: AACAAGAAAGCTATACAGAAGACTTGTGTAAAGTCATGGTGAATATTCACTGAAGCCATCTAATAAGAGTAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTCCTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTCGCCCCTCTCACCTCTaGTTCCAGTTTCTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IVPPGNTCASMCQIKGTCRPSHL*FQFLSG Trigger: CCCAGAGAGAAACTGGAAGCAGAGGTGAGAGGGGCG...ACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAGGAACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTAAAATACCACTGTGCTCCTGCCTaGTCTGGGGAATCCCATCGC | + |
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Preference number: 4 (lower is better) Translates to: LLGTPVPPCARSKVPVKYHCAPA*SGESHR Trigger: GCGATGGGATTCCCCAGAGCAGGCAGGAGCACAGTG...GTATTTTACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAAGCGGCGTTGGATCAGTaGGGAACAGCTCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STAHMSHTTSEATVLWTEAALDQ*GTALPQ Trigger: CTGGGGGAGAGCTGTTCCCCACTGATCCAACGCCGC...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | ATAGTTCCTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTGCTGAAGGCCTGTGTTaGGAATCCTGGAGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IVPPGNTCASMCQIKGTCAEGLC*ESWSCP Trigger: TGGACAACTCCAGGATTCCCAACACAGGCCTTCAGC...ACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAGGAACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR TCA 90 bp | AGATGCCAAGTACACTGTTTCTCGGCTTTCAGTCAGCCTATAGTTCCTCCTGGGTCCTTCGTGTACTGCTaGAGGCCTGTGTTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: RCQVHCFSAFSQPIVPPGSFVYC*RPVLGI Trigger: GATTCCCAACACAGGCCTTCAGCAGTACACGAAGGA...CCCAGGAGGAACTATAGGCTGACTGAAAGCCGAGAAACAGTGTACTTGGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCTGCAGACCCGTTTTaGGGTAGTGCCCTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: STAHMSHTTSEATVLWTESADPF*GSALPG Trigger: TCCAGGCAGGGCACTACCGCAAAACGGGTCTGCAGA...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | AGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACACTGTTTCTCGGCTTTTCCGTTTTCACACTGTaGTCCTGCCTGCTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RLLFCGQNQMPSTLFLGFSVFTL*SCLLWG Trigger: TCCCCAGAGCAGGCAGGAGCACAGTGTGAAAACGGA...AAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | GAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCAATTTGCGGTAGTGCCCTaGCTGGAGGAGCAAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ETLCKHNWACFAEGTGIQFAVVP*LEEQGS Trigger: GGACCCTTGCTCCTCCAGGCAGGGCACTACCGCAAA...TTGAATGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR TCA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAACTCATGGAAGATaGCCAGGGGGAGGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: STAHMSHTTSEATVLWTESTHGR*PGGGRR Trigger: TCTTCTGCCTCCCCCTGGTCATCTTCCATGAGTTGA...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | AATTCAGAGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGTCGGAAAGAAGAGTTaGGGATCCGTGGGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NSEHCTYEPYNFRGYCSVVGKKS*GSVGSL Trigger: AAGGGACCCCACGGATCCCCAACTCTTCTTTCCGAC...CACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCTCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTAAAATACCTGTGTTGGGAATCCTaGAGTTGTCCAGTTCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLGTPVPPCARSKVPVKYLCWES*SCPVLR Trigger: ACGAAGAACTGGACAACTCCAGGATTCCCAACACAG...GTATTTTACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | AGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACACTGTTTCTCGGCTTTTCCCTTCTCCTCAAATaGCCGGATGGTTCTTTACCC | + |
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Preference number: 4 (lower is better) Translates to: RLLFCGQNQMPSTLFLGFSLLLK*PDGSLP Trigger: GGGTAAAGAACCATCCGGGCATTTGAGGAGAAGGGA...AAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTCTCTGGGCATTAGCTACTGATTATTCTTTCAACTCCTACCACTACCACTCTGCAGACCCGTTTTaGGGTAGTGCCCTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLLWALATDYSFNSYHYHSADPF*GSALPG Trigger: TCCAGGCAGGGCACTACCGCAAAACGGGTCTGCAGA...GTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTACATTTTCGTTCAATGACATGTTACAGCTCTCTGATTTTTCCTGTTCAGCGGCGTTGGATCAGTaGGGAACAGCTCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MPTFSFNDMLQLSDFSCSAALDQ*GTALPQ Trigger: CTGGGGGAGAGCTGTTCCCCACTGATCCAACGCCGC...TGAACAGGAAAAATCAGAGAGCTGTAACATGTCATTGAACGAAAATGTAGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | AGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACTTCTCTCTGGGCACATaGACTCGCAGAGCGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SHTTSEATVLWTESDAKYFSLGT*TRRASF Trigger: AAAAGACGCTCTGCGAGTCCATGTGCCCAGAGAGAA...GTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGAAACTTAAAAGAAATTGCTTTGTCTCCAGGCCAGATTCTGCCATCTCAACTTGGTGGCTTGGTTaGAGGTCCCAAGGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLKLKRNCFVSRPDSAISTWWLG*RSQGPS Trigger: GCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGT...TGAGATGGCAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAAGTTTCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATGTCGGAAAGAAGAGTTaGGGATCCGTGGGGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVFLLWALATDYVGKKS*GSVGSL Trigger: AAGGGACCCCACGGATCCCCAACTCTTCTTTCCGAC...ATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR GCA 90 bp | AGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACCACGATGCACATCACTaGCAAGTTGCCAATAATGCC | + |
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Preference number: 4 (lower is better) Translates to: SHTTSEATVLWTESDAKYHDAHH*QVANNA Trigger: GGCATTATTGGCAACTTGGCAGTGATGTGCATCGTG...GTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCTTAGTCAACTCATaGAAGATGACCAGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKHCANIIGLVLLKAQAFLVNS*KMTRGR Trigger: CCTCCCCCTGGTCATCTTCCATGAGTTGACTAAGAA...TGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCACGTCACTGGTCACAGTaGAAGACTTCTGGATACACT | + |
|
Preference number: 4 (lower is better) Translates to: GRKHCANIIGLVLLKAQARHWSQ*KTSGYT Trigger: AGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACG...TGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAGAGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGACAGCTCCAGCTCTGTaGTGTACTCGTTGTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSEHCTYEPYNFRGYCSVTAPAL*CTRCRC Trigger: ACAACGACAACGAGTACACCACAGAGCTGGAGCTGT...CACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCTCTGAATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCTCTGGGCATTAGCTACTGATTATTCTTTCAACTCCTACCACTACCACTCAACTCATGGAAGATaGCCAGGGGGAGGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLWALATDYSFNSYHYHSTHGR*PGGGRR Trigger: TCTTCTGCCTCCCCCTGGTCATCTTCCATGAGTTGA...GTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGATGTTAAAGAACACAGAAGCCAACAGGTAGGAAACACTGTGCAAACACAGGAGAGATCTTTATaGCACACCGTTCTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRDVKEHRSQQVGNTVQTQERSL*HTVLQE Trigger: CTCCTGCAGAACGGTGTGTCATAAAGATCTCTCCTG...TGTTTGCACAGTGTTTCCTACCTGTTGGCTTCTGTGTTCTTTAACATCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR TCA 90 bp | AGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACTGGCCATGTAGGCAGTaGCAATGTTGCAGATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTTSEATVLWTESDAKYWPCRQ*QCCRYS Trigger: AGAATATCTGCAACATTGTCACTGCCTACATGGCCA...GTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR GCA 90 bp | TCAATGCCTACATTTTCGTTCAATGACATGTTACAGCTCTCTGATTTTTCCTGTCGCCCCTCTCACCTCTaGTTCCAGTTTCTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMPTFSFNDMLQLSDFSCRPSHL*FQFLSG Trigger: CCCAGAGAGAAACTGGAAGCAGAGGTGAGAGGGGCG...ACAGGAAAAATCAGAGAGCTGTAACATGTCATTGAACGAAAATGTAGGCATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR GCA 90 bp | CTACTGATTATTCTTTCAACTCCTACCACTACCACATTAGGACCGGCTTTTAATTCCGTTTTCACACTGTaGTCCTGCCTGCTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLIILSTPTTTTLGPAFNSVFTL*SCLLWG Trigger: TCCCCAGAGCAGGCAGGAGCACAGTGTGAAAACGGA...ATTAAAAGCCGGTCCTAATGTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGTTTGCGGTAGTGCCCTaGCTGGAGGAGCAAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTNKSDFIWVTQVLTMKWFAVVP*LEEQGS Trigger: GGACCCTTGCTCCTCCAGGCAGGGCACTACCGCAAA...CCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCTCTGGGCATTAGCTACTGATTATTCTTTCAACTCCTACCACTACCACAGCCCAAATCTTCCTTaGTCAGCTGGCGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLWALATDYSFNSYHYHSPNLP*SAGGGQ Trigger: TTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCT...GTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGATGTTAAAGAACACAGAAGCCAACAGGTAGGAAACACTGTGCAAACATCAGAGCCACCACTGTaGAGTTCATCTGGCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRDVKEHRSQQVGNTVQTSEPPL*SSSGSL Trigger: TAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGA...TGTTTGCACAGTGTTTCCTACCTGTTGGCTTCTGTGTTCTTTAACATCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | AAATTAGTTGAGTTGACTCTCTTAAGTTTTCAATCACTGCATTTGAGTGGCGTATGCTCCTGCCTGCTCTaGGGAATCCCATCGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLVELTLLSFQSLHLSGVCSCLL*GIPSRL Trigger: CAAGCGCGATGGGATTCCCCAGAGCAGGCAGGAGCA...TACGCCACTCAAATGCAGTGATTGAAAACTTAAGAGAGTCAACTCAACTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGACCTTTAAGTCAAATCCAAATCAAAGCAGTTTGTATGTACACACATTGTGCTCCTGCCTGCTCTaGGGAATCCCATCGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RETFKSNPNQSSLYVHTLCSCLL*GIPSRL Trigger: CAAGCGCGATGGGATTCCCCAGAGCAGGCAGGAGCA...CAATGTGTGTACATACAAACTGCTTTGATTTGGATTTGACTTAAAGGTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCAGGATTCTTGGGTCAATaGGTAGAAGGGGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRKHCANIIGLVLLKAQAGFLGQ*VEGVLQ Trigger: TTGAAGAACCCCTTCTACCCATTGACCCAAGAATCC...TGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | ACAATGTACTTCCAATCACAACTCAAACACAAAATAACTAGCAAAATCCCGGGCTCTTCCTTGCTCAGCTaGCGGAGGACAACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMYFQSQLKHKITSKIPGSSLLS*RRTTSG Trigger: TCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGA...GCCCGGGATTTTGCTAGTTATTTTGTGTTTGAGTTGTGATTGGAAGTACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATGCCAAACAGTGGAAGACTTCTaGATACACTCCTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YEPYNFRGYCSVDRIRCQTVEDF*IHSSQQ Trigger: CTGCTGTGAGGAGTGTATCCAGAAGTCTTCCACTGT...TTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CCA 90 bp | GAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCAAGATGGTTCTTTACCCTaGGCACTTTTCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETLCKHNWACFAEGTGIQDGSLP*ALFHLQ Trigger: CTGGAGATGGAAAAGTGCCCAGGGTAAAGAACCATC...TTGAATGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | GGTCACCCAGGTCTTAACAATGAAGTGGCAAGGGTAGGATTTAATAAAGGTCTACTGTGTTGGGAATCCTaGAGTTGTCCAGTTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GHPGLNNEVARVGFNKGLLCWES*SCPVLR Trigger: ACGAAGAACTGGACAACTCCAGGATTCCCAACACAG...TAGACCTTTATTAAATCCTACCCTTGCCACTTCATTGTTAAGACCTGGGTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CCA 90 bp | CTACTGATTATTCTTTCAACTCCTACCACTACCACATTAGGACCGGCTTTTAATGCTGAAGGCCTGTGTTaGGAATCCTGGAGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLIILSTPTTTTLGPAFNAEGLC*ESWSCP Trigger: TGGACAACTCCAGGATTCCCAACACAGGCCTTCAGC...ATTAAAAGCCGGTCCTAATGTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTACTGATTATTCTTTCAACTCCTACCACTACCACATTAGGACCGGCTTTCCCAGAAAGCCAGGTTaGCCAAGAGAGAATTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LATDYSFNSYHYHIRTGFPRKPG*PRENWR Trigger: TCTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGG...AAAGCCGGTCCTAATGTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATTTCTTAGTCAACTCATaGAAGATGACCAGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVFLLWALATDYFLVNS*KMTRGR Trigger: CCTCCCCCTGGTCATCTTCCATGAGTTGACTAAGAA...ATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACACACACACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| 3UTR CAA 72 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTaGCTGAAGGCACAGGCATTCAACCACCCACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRKHCANIIGLV*LKAQAFNHPHF Trigger: AAAATGTGGGTGGTTGAATGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR TCA 90 bp | AACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCATCCTTCGTGTACTGCTaGAGGCCTGTGTTGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NKQIRFYLGHPGLNNEVASFVYC*RPVLGI Trigger: GATTCCCAACACAGGCCTTCAGCAGTACACGAAGGA...TGCCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR GCA 90 bp | AGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACACTGTTTCTCGGCTTTTATAGGGCACGATCTTaGAGGAGAAATCTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLFCGQNQMPSTLFLGFYRARS*RRNLPK Trigger: TTTTGGAAGATTTCTCCTGCAAGATCGTGCCCTATA...AAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | TTAGCTACTGATTATTCTTTCAACTCCTACCACTACCACATTAGGACCGGCTTTGATGGTTCTTTACCCTaGGCACTTTTCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LATDYSFNSYHYHIRTGFDGSLP*ALFHLQ Trigger: CTGGAGATGGAAAAGTGCCCAGGGTAAAGAACCATC...AAAGCCGGTCCTAATGTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | GGTCACCCAGGTCTTAACAATGAAGTGGCAAGGGTAGGATTTAATAAAGGTCTATGGCCAAGAGAGAATTaGAGATGCTCCTCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHPGLNNEVARVGFNKGLWPREN*RCSSCS Trigger: ACTACATGAGGAGCATCTCCAATTCTCTCTTGGCCA...TAGACCTTTATTAAATCCTACCCTTGCCACTTCATTGTTAAGACCTGGGTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | ACAATGTACTTCCAATCACAACTCAAACACAAAATAACTAGCAAAATCCCGGGCCCCAGAAAGCCAGGTTaGCCAAGAGAGAATTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMYFQSQLKHKITSKIPGPRKPG*PRENWR Trigger: TCTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGG...GCCCGGGATTTTGCTAGTTATTTTGTGTTTGAGTTGTGATTGGAAGTACATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGTCTTCCTTGCTCAGCTaGCGGAGGACAACTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTNKSDFIWVTQVLTMKWSSLLS*RRTTSG Trigger: TCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGA...CCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | AATTCAGAGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGAAAACCCATATAAAATaGTCAGAGCCACCACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSEHCTYEPYNFRGYCSVKTHIK*SEPPLC Trigger: GCACAGTGGTGGCTCTGACCATTTTATATGGGTTTT...CACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCTCTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAGTTGAGTTGACTCTCTTAAGTTTTCAATCACTGCATTTGAGTGGCGTAAGCCCAAATCTTCCTTaGTCAGCTGGCGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KLVELTLLSFQSLHLSGVSPNLP*SAGGGQ Trigger: TTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCT...TACGCCACTCAAATGCAGTGATTGAAAACTTAAGAGAGTCAACTCAACTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CCA 90 bp | TCAATGCCTACATTTTCGTTCAATGACATGTTACAGCTCTCTGATTTTTCCTGTTTCTCTCTGGGCACATaGACTCGCAGAGCGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SMPTFSFNDMLQLSDFSCFSLGT*TRRASF Trigger: AAAAGACGCTCTGCGAGTCCATGTGCCCAGAGAGAA...ACAGGAAAAATCAGAGAGCTGTAACATGTCATTGAACGAAAATGTAGGCATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATTCTTTCAACGGATTCTTGGGTCAATaGGTAGAAGGGGTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVFLLWALATDYSFNGFLGQ*VEGVLQ Trigger: TTGAAGAACCCCTTCTACCCATTGACCCAAGAATCC...GTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGTCCCTTCTCCTCAAATaGCCGGATGGTTCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: KTNKSDFIWVTQVLTMKWSLLLK*PDGSLP Trigger: GGGTAAAGAACCATCCGGGCATTTGAGGAGAAGGGA...CCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR GCA 90 bp | ATGCCTACATTTTCGTTCAATGACATGTTACAGCTCTCTGATTTTTCCTGTTCACACGATGCACATCACTaGCAAGTTGCCAATAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: MPTFSFNDMLQLSDFSCSHDAHH*QVANNA Trigger: GGCATTATTGGCAACTTGGCAGTGATGTGCATCGTG...TGAACAGGAAAAATCAGAGAGCTGTAACATGTCATTGAACGAAAATGTAGGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CCA 90 bp | AACAGTAAGGCCAGTTTTAAACTGTGCATAGGACCAGCAATTGTGTTATTTAAGTGGCCAAGAGAGAATTaGAGATGCTCCTCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKASFKLCIGPAIVLFKWPREN*RCSSCS Trigger: ACTACATGAGGAGCATCTCCAATTCTCTCTTGGCCA...CTTAAATAACACAATTGCTGGTCCTATGCACAGTTTAAAACTGGCCTTACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR GCA 90 bp | CTACTGATTATTCTTTCAACTCCTACCACTACCACATTAGGACCGGCTTTTAATTATAGGGCACGATCTTaGAGGAGAAATCTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLIILSTPTTTTLGPAFNYRARS*RRNLPK Trigger: TTTTGGAAGATTTCTCCTGCAAGATCGTGCCCTATA...ATTAAAAGCCGGTCCTAATGTGGTAGTGGTAGGAGTTGAAAGAATAATCAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTGAAACTTAAAAGAAATTGCTTTGTCTCCAGGCCAGATTCTGCCATCTCAAAAAACAAAAGGAACTaGCTGATGATGTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLKRNCFVSRPDSAISKNKRN*LMMLSR Trigger: CCTGCTCAACATCATCAGCCAGTTCCTTTTGTTTTT...TGAGATGGCAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAAGTTTCAAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS GCA 90 bp | GGTCAGGAACCCAGTCATCTGCAGACCCGTTTTGCGGTAGTGCCCTaGCTGGAGGAGCAAGGGTCCTTCCTTCGTGTACTGCTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQEPSHLQTRFAVVP*LEEQGSFLRVLLKA Trigger: GGCCTTCAGCAGTACACGAAGGAAGGACCCTTGCTCCTCCAGGCAGGGCACTACCGCAAAACGGGTCTGCAGATGACTGGGTTCCTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 90 bp | GAGGTCGCCCCTCTCACCTCTGCTTCCAGTTTCTCTCTGGGCACATaGACTCGCAGAGCGTCTTTTGCCGAATTCCCAGGTCCACGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EVAPLTSASSFSLGT*TRRASFAEFPGPRA Trigger: TGCCCGTGGACCTGGGAATTCGGCAAAAGACGCTCTGCGAGTCCATGTGCCCAGAGAGAAACTGGAAGCAGAGGTGAGAGGGGCGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 90 bp | TTTACCCTGGGCACTTTTCCATCTCCAGGCACTTGGTGGCTTGGTTaGAGGTCCCAAGGGCCCAGCAGCCGCCGCTTCTTCAATCACACC | + |
|
Preference number: 5 (lower is better) Translates to: FTLGTFPSPGTWWLG*RSQGPSSRRFFNHT Trigger: GGTGTGATTGAAGAAGCGGCGGCTGCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGAAAAGTGCCCAGGGTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 90 bp | CTTGGGTCAATGGGTAGAAGGGGTTCTTCAATCTCACGCGCCGCGTaGTGTTTCCACGGCGTGGACCCCCTTGGTCAGGAACCCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGSMGRRGSSISRAA*CFHGVDPLGQEPSH Trigger: ATGACTGGGTTCCTGACCAAGGGGGTCCACGCCGTGGAAACACCACGCGGCGCGTGAGATTGAAGAACCCCTTCTACCCATTGACCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 90 bp | TCTGCAGGAGCCTGGCCACTAAAGCCCAAATCTTCCTTGCTCAGCTaGCGGAGGACAACTTCCGGAAGGGCCAAAAGCAGAGCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: SAGAWPLKPKSSLLS*RRTTSGRAKSRAPT Trigger: GGTTGGAGCTCTGCTTTTGGCCCTTCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTTTAGTGGCCAGGCTCCTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS GCA 90 bp | GTCAGAGCCACCACTGTGCAGTTCATCTGGCTCTCTAGATGGATCTaGCGCTTGTTTCCACGGGTACTGGCCTTCTCCGCTTTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VRATTVQFIWLSRWI*RLFPRVLAFSALRI Trigger: GATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | TCCGTGGGGTCCCTTCTCCTCAAATGCCCGGATGGTTCTTTACCCTaGGCACTTTTCCATCTCCAGGCACTTGGTGGCTTGGTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVGSLLLKCPDGSLP*ALFHLQALGGLVGG Trigger: ACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGAAAAGTGCCCAGGGTAAAGAACCATCCGGGCATTTGAGGAGAAGGGACCCCACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 90 bp | TCATCTGGCTCTCTAGATGGATCTGCCGCTTGTTTCCACGGGTACTaGCCTTCTCCGCTTTGCGGATCTTCCGAGCAGTCACTAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSLDGSAACFHGY*PSPLCGSSEQSLES Trigger: GCTCTCTAGTGACTGCTCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | GCGACAGCTCCAGCTCTGTGGTGTACTCGTTGTCGTTGTCGTCACTaGTCACAGTGGAAGACTTCTGGATACACTCCTCACAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATAPALWCTRCRCRH*SQWKTSGYTPHSSS Trigger: GCTGCTGCTGTGAGGAGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGGAGCTGTCGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | GTGTACTCGTTGTCGTTGTCGTCACTGGTCACAGTGGAAGACTTCTaGATACACTCCTCACAGCAGCAGCAGCAGCACTCCATGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYSLSLSSLVTVEDF*IHSSQQQQQHSMKA Trigger: GGCCTTCATGGAGTGCTGCTGCTGCTGCTGTGAGGAGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | CCAGCTCTGTGGTGTACTCGTTGTCGTTGTCGTCACTGGTCACAGTaGAAGACTTCTGGATACACTCCTCACAGCAGCAGCAGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PALWCTRCRCRHWSQ*KTSGYTPHSSSSST Trigger: AGTGCTGCTGCTGCTGCTGTGAGGAGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | AAAATGGTCAGAGCCACCACTGTGCAGTTCATCTGGCTCTCTAGATaGATCTGCCGCTTGTTTCCACGGGTACTGGCCTTCTCCGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KMVRATTVQFIWLSR*ICRLFPRVLAFSAL Trigger: CAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGACCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | AGATGCCAAGTACACTGTTTCTCGGCTTTCAGTCAGCCTATAGTTCCTCCTGGGTGTCGGAAAGAAGAGTaGGGGATCCGTGGGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCQVHCFSAFSQPIVPPGCRKEE*GIRGVP Trigger: AGGGACCCCACGGATCCCCAACTCTTCTTTCCGACA...CCCAGGAGGAACTATAGGCTGACTGAAAGCCGAGAAACAGTGTACTTGGCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CAA 90 bp | ATAGTTCCTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTGGCTCCGTAGGATTCTaGGGTCAATGGGTAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVPPGNTCASMCQIKGTCGSVGF*GQWVEG Trigger: CCCTTCTACCCATTGACCCAAGAATCCTACGGAGCC...ACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAGGAACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 90 bp | CAAAACCCATATAAAATGGTCAGAGCCACCACTGTGCAGTTCATCTaGCTCTCTAGATGGATCTGCCGCTTGTTTCCACGGGTACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QNPYKMVRATTVQFI*LSRWICRLFPRVLA Trigger: GGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGACCATTTTATATGGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | AGATTTGGAGGTAAAAGTCTCACTCATCCATCTGCCTGCTCTCCAGCCAGGCTTCACATCACTGCCAAGTaGCCAATAATGCCGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RFGGKSLTHPSACSPARLHITAK*PIMPVP Trigger: TGGGACCGGCATTATTGGCAACTTGGCAGTGATGTG...AAGCCTGGCTGGAGAGCAGGCAGATGGATGAGTGAGACTTTTACCTCCAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGGAACACCTGTGCCTCCATGTGCCAGATCAAAGGTACCTGTAAAATACTCCCAGAAAGCCAGGTaGGCCAAGAGAGAATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGTPVPPCARSKVPVKYSQKAR*AKRELE Trigger: CTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGGA...GTATTTTACAGGTACCTTTGATCTGGCACATGGAGGCACAGGTGTTCCCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGAAACTTAAAAGAAATTGCTTTGTCTCCAGGCCAGATTCTGCCATCTCACACTTGGTGGCTTGGTaGGAGGTCCCAAGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLKLKRNCFVSRPDSAISHLVAW*EVPRAQ Trigger: CTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTG...TGAGATGGCAGAATCTGGCCTGGAGACAAAGCAATTTCTTTTAAGTTTCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAACACATCACTGCCAAGTaGCCAATAATGCCGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STAHMSHTTSEATVLWTEHITAK*PIMPVP Trigger: TGGGACCGGCATTATTGGCAACTTGGCAGTGATGTG...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGGAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCAGTGTACTCGTTGTCGTaGTCGTCACTGGTCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRKHCANIIGLVLLKAQAVYSLS*SSLVTV Trigger: CACTGTGACCAGTGACGACAACGACAACGAGTACAC...TGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | AGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAATCAGATGCCAAGTACTCTGTGGTGTACTCGTaGTCGTTGTCGTCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SHTTSEATVLWTESDAKYSVVYS*SLSSLV Trigger: GACCAGTGACGACAACGACAACGAGTACACCACAGA...GTACTTGGCATCTGATTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | GGTCACCCAGGTCTTAACAATGAAGTGGCAAGGGTAGGATTTAATAAAGGTCTAGGCTCCGTAGGATTCTaGGGTCAATGGGTAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GHPGLNNEVARVGFNKGLGSVGF*GQWVEG Trigger: CCCTTCTACCCATTGACCCAAGAATCCTACGGAGCC...TAGACCTTTATTAAATCCTACCCTTGCCACTTCATTGTTAAGACCTGGGTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CAA 90 bp | GAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCAAAAGCCCAAATCTTCCTaGCTCAGCTGGCGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ETLCKHNWACFAEGTGIQKPKSS*LSWRRT Trigger: TGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTT...TTGAATGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATAAGCCCAAATCTTCCTaGCTCAGCTGGCGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVFLLWALATDYKPKSS*LSWRRT Trigger: TGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTT...ATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CAA 90 bp | AAAACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCACTTGGTGGCTTGGTaGGAGGTCCCAAGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KTNKSDFIWVTQVLTMKWHLVAW*EVPRAQ Trigger: CTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTG...CCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
||
| CDS-3UTR CAA 90 bp | ACAATGTACTTCCAATCACAACTCAAACACAAAATAACTAGCAAAATCCCGGGCTCCATCTCCAGGCACTaGGTGGCTTGGTTGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TMYFQSQLKHKITSKIPGSISRH*VAWLEV Trigger: GACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGA...GCCCGGGATTTTGCTAGTTATTTTGTGTTTGAGTTGTGATTGGAAGTACATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTTTCTTCTCTGGGCATTAGCTACTGATTATTCTTTCAACTCCCAGAAAGCCAGGTaGGCCAAGAGAGAATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVFLLWALATDYSFNSQKAR*AKRELE Trigger: CTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGGA...GTTGAAAGAATAATCAGTAGCTAATGCCCAGAGAAGAAACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CAA 90 bp | GAAACACTGTGCAAACATAATTGGGCTTGTTTTGCTGAAGGCACAGGCATTCAACAGATAACGGCAAGTTaGGCAGTGGTGGAAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETLCKHNWACFAEGTGIQQITAS*AVVEEQ Trigger: TTGCTCTTCCACCACTGCCAAACTTGCCGTTATCTG...TTGAATGCCTGTGCCTTCAGCAAAACAAGCCCAATTATGTTTGCACAGTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCACATATGAGCCATACAACTTCAGAGGCTACTGTTCTGTGGACAGAAGAGCCAAAACATAGATaGTGTCCGGTAAATCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STAHMSHTTSEATVLWTEEPKHR*CPVNQE Trigger: CTCCTGATTTACCGGACACAATCTATGTTTTGGCTC...TTCTGTCCACAGAACAGTAGCCTCTGAAGTTGTATGGCTCATATGTGCAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGACCTTTAAGTCAAATCCAAATCAAAGCAGTTTGTATGTACACACATTGTCCATCTCCAGGCACTaGGTGGCTTGGTTGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RETFKSNPNQSSLYVHTLSISRH*VAWLEV Trigger: GACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGA...CAATGTGTGTACATACAAACTGCTTTGATTTGGATTTGACTTAAAGGTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CAA 90 bp | AACAAACAAATCAGATTTTATTTGGGTCACCCAGGTCTTAACAATGAAGTGGCACAGATAACGGCAAGTTaGGCAGTGGTGGAAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKQIRFYLGHPGLNNEVAQITAS*AVVEEQ Trigger: TTGCTCTTCCACCACTGCCAAACTTGCCGTTATCTG...TGCCACTTCATTGTTAAGACCTGGGTGACCCAAATAAAATCTGATTTGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200812.2 |
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| CDS-3UTR CAA 90 bp | AAATTAGTTGAGTTGACTCTCTTAAGTTTTCAATCACTGCATTTGAGTGGCGTAAACTGGCTGATGATGTaGAGCAGGTCCATGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLVELTLLSFQSLHLSGVNWLMM*SRSMVC Trigger: GCAGACCATGGACCTGCTCAACATCATCAGCCAGTT...TACGCCACTCAAATGCAGTGATTGAAAACTTAAGAGAGTCAACTCAACTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | GGCACTTTTCCATCTCCAGGCACTTGGTGGCTTGGTTaGAGGTCCCAAGGGCCCAGCAGCCGCCGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTFPSPGTWWLG*RSQGPSSRRFF Trigger: GAAGAAGCGGCGGCTGCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGAAAAGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 72 bp | CGAATTCCCAGGTCCACGGGCATCCCTGCTGCGGCGTaGGATCAGTGGGGAACAGCTCTCCCCCAGACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RIPRSTGIPAAA*DQWGTALPQTS Trigger: ACTTGTCTGGGGGAGAGCTGTTCCCCACTGATCCAACGCCGCAGCAGGGATGCCCGTGGACCTGGGAATTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 72 bp | GGGCACTTTTCCATCTCCAGGCACTTGGTGGCTTGGTaGGAGGTCCCAAGGGCCCAGCAGCCGCCGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GHFSISRHLVAW*EVPRAQQPPLL Trigger: AAGAAGCGGCGGCTGCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGAAAAGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | AGGTCCACGGGCATCCCTGCTGCGGCGTTGGATCAGTaGGGAACAGCTCTCCCCCAGACAAGTTCCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSTGIPAAALDQ*GTALPQTSSIP Trigger: AGGAATGGAACTTGTCTGGGGGAGAGCTGTTCCCCACTGATCCAACGCCGCAGCAGGGATGCCCGTGGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | GAATTCCCAGGTCCACGGGCATCCCTGCTGCGGCGTTaGATCAGTGGGGAACAGCTCTCCCCCAGACAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EFPGPRASLLRR*ISGEQLSPRQV Trigger: AACTTGTCTGGGGGAGAGCTGTTCCCCACTGATCCAACGCCGCAGCAGGGATGCCCGTGGACCTGGGAATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS GCA 72 bp | CCCAGTCATCTGCAGACCCGTTTTGCGGTAGTGCCCTaGCTGGAGGAGCAAGGGTCCTTCCTTCGTGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSHLQTRFAVVP*LEEQGSFLRVL Trigger: CAGTACACGAAGGAAGGACCCTTGCTCCTCCAGGCAGGGCACTACCGCAAAACGGGTCTGCAGATGACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | ATGGGTAGAAGGGGTTCTTCAATCTCACGCGCCGCGTaGTGTTTCCACGGCGTGGACCCCCTTGGTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: MGRRGSSISRAA*CFHGVDPLGQE Trigger: TTCCTGACCAAGGGGGTCCACGCCGTGGAAACACCACGCGGCGCGTGAGATTGAAGAACCCCTTCTACCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 90 bp | CTTTACCCTGGGCACTTTTCCATCTCCAGGCACTTGGTGGCTTGGTaGGAGGTCCCAAGGGCCCAGCAGCCGCCGCTTCTTCAATCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LYPGHFSISRHLVAW*EVPRAQQPPLLQSH Trigger: GTGTGATTGAAGAAGCGGCGGCTGCTGGGCCCTTGGGACCTCCAACCAAGCCACCAAGTGCCTGGAGATGGAAAAGTGCCCAGGGTAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | CCCCCTCCGATGTCGGAAAGAAGAGTTGGGGATCCGTaGGGTCCCTTCTCCTCAAATGCCCGGATGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPPMSERRVGDP*GPFSSNARMVL Trigger: AAGAACCATCCGGGCATTTGAGGAGAAGGGACCCCACGGATCCCCAACTCTTCTTTCCGACATCGGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | CTGGGTTCCGTTTTCACACTGTGCTCCTGCCTGCTCTaGGGAATCCCATCGCGCTTGGAACTCATCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSVFTLCSCLL*GIPSRLELISP Trigger: GGGAGAGATGAGTTCCAAGCGCGATGGGATTCCCCAGAGCAGGCAGGAGCACAGTGTGAAAACGGAACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 72 bp | TGCCGCTTGTTTCCACGGGTACTGGCCTTCTCCGCTTaGCGGATCTTCCGAGCAGTCACTAGAGAGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRLFPRVLAFSA*RIFRAVTREQV Trigger: CACCTGCTCTCTAGTGACTGCTCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CAA 90 bp | ACACACCGTTCTGCAGGAGCCTGGCCACTAAAGCCCAAATCTTCCTaGCTCAGCTGGCGGAGGACAACTTCCGGAAGGGCCAAAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: THRSAGAWPLKPKSS*LSWRRTTSGRAKSR Trigger: TCTGCTTTTGGCCCTTCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTTTAGTGGCCAGGCTCCTGCAGAACGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 90 bp | GCCACCACTGTGCAGTTCATCTGGCTCTCTAGATGGATCTGCCGCTaGTTTCCACGGGTACTGGCCTTCTCCGCTTTGCGGATCTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ATTVQFIWLSRWICR*FPRVLAFSALRIFR Trigger: TCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS TCA 72 bp | GCCTGGAGGAGCAAGGGTCCTTCCTTCGTGTACTGCTaGAGGCCTGTGTTGGGAATCCTGGAGTTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AWRSKGPSFVYC*RPVLGILELSS Trigger: ACTGGACAACTCCAGGATTCCCAACACAGGCCTTCAGCAGTACACGAAGGAAGGACCCTTGCTCCTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 72 bp | GCCTGGCCACTAAAGCCCAAATCTTCCTTGCTCAGCTaGCGGAGGACAACTTCCGGAAGGGCCAAAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AWPLKPKSSLLS*RRTTSGRAKSR Trigger: TCTGCTTTTGGCCCTTCCGGAAGTTGTCCTCCGCCAGCTGAGCAAGGAAGATTTGGGCTTTAGTGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CAA 72 bp | GTGCAGTTCATCTGGCTCTCTAGATGGATCTGCCGCTaGTTTCCACGGGTACTGGCCTTCTCCGCTTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQFIWLSRWICR*FPRVLAFSALR Trigger: CCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS GCA 72 bp | GATCTCTGGGTTCCGTTTTCACACTGTGCTCCTGCCTaGTCTGGGGAATCCCATCGCGCTTGGAACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DLWVPFSHCAPA*SGESHRAWNSS Trigger: AGATGAGTTCCAAGCGCGATGGGATTCCCCAGAGCAGGCAGGAGCACAGTGTGAAAACGGAACCCAGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS GCA 72 bp | ACCACTGTGCAGTTCATCTGGCTCTCTAGATGGATCTaGCGCTTGTTTCCACGGGTACTGGCCTTCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TTVQFIWLSRWI*RLFPRVLAFSA Trigger: AGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 72 bp | AGGGTCCTTCCTTCGTGTACTGCTGAAGGCCTGTGTTaGGAATCCTGGAGTTGTCCAGTTCTTCGTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVLPSCTAEGLC*ESWSCPVLRGQ Trigger: CTGGCCACGAAGAACTGGACAACTCCAGGATTCCCAACACAGGCCTTCAGCAGTACACGAAGGAAGGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 72 bp | CATGACCGCATAGGCTCCGTAGGATTCTTGGGTCAATaGGTAGAAGGGGTTCTTCAATCTCACGCGCCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: HDRIGSVGFLGQ*VEGVLQSHAPR Trigger: ACGCGGCGCGTGAGATTGAAGAACCCCTTCTACCCATTGACCCAAGAATCCTACGGAGCCTATGCGGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
||
| CDS CCA 72 bp | TCTCTAGATGGATCTGCCGCTTGTTTCCACGGGTACTaGCCTTCTCCGCTTTGCGGATCTTCCGAGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLDGSAACFHGY*PSPLCGSSEQS Trigger: TGACTGCTCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CCA 72 bp | AGAGCCACCACTGTGCAGTTCATCTGGCTCTCTAGATaGATCTGCCGCTTGTTTCCACGGGTACTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RATTVQFIWLSR*ICRLFPRVLAF Trigger: GAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CAA 72 bp | CTGAAGGGCGACAGCTCCAGCTCTGTGGTGTACTCGTaGTCGTTGTCGTCACTGGTCACAGTGGAAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKGDSSSSVVYS*SLSSLVTVEDF Trigger: GAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGGAGCTGTCGCCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
||
| CDS CAA 90 bp | AGATGGATCTGCCGCTTGTTTCCACGGGTACTGGCCTTCTCCGCTTaGCGGATCTTCCGAGCAGTCACTAGAGAGCAGGTGATGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RWICRLFPRVLAFSA*RIFRAVTREQVMVK Trigger: TTTCACCATCACCTGCTCTCTAGTGACTGCTCGGAAGATCCGCAAAGCGGAGAAGGCCAGTACCCGTGGAAACAAGCGGCAGATCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | TTGTCGTTGTCGTCACTGGTCACAGTGGAAGACTTCTaGATACACTCCTCACAGCAGCAGCAGCAGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLSSLVTVEDF*IHSSQQQQQHS Trigger: GGAGTGCTGCTGCTGCTGCTGTGAGGAGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CAA 72 bp | GGCGACAGCTCCAGCTCTGTGGTGTACTCGTTGTCGTaGTCGTCACTGGTCACAGTGGAAGACTTCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: GDSSSSVVYSLS*SSLVTVEDFWI Trigger: TATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGGAGCTGTCGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | GGAGAGATCTTTATGACACACCGTTCTGCAGGAGCCTaGCCACTAAAGCCCAAATCTTCCTTGCTCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GEIFMTHRSAGA*PLKPKSSLLSW Trigger: CCAGCTGAGCAAGGAAGATTTGGGCTTTAGTGGCCAGGCTCCTGCAGAACGGTGTGTCATAAAGATCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CCA 72 bp | CCAGCTCTGTGGTGTACTCGTTGTCGTTGTCGTCACTaGTCACAGTGGAAGACTTCTGGATACACTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PALWCTRCRCRH*SQWKTSGYTPH Trigger: GTGAGGAGTGTATCCAGAAGTCTTCCACTGTGACCAGTGACGACAACGACAACGAGTACACCACAGAGCTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | TATAAAATGGTCAGAGCCACCACTGTGCAGTTCATCTaGCTCTCTAGATGGATCTGCCGCTTGTTTCCACGG | + |
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Preference number: 6 (lower is better) Translates to: YKMVRATTVQFI*LSRWICRLFPR Trigger: CCGTGGAAACAAGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGACCATTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS GCA 72 bp | TGCAAAACCCATATAAAATGGTCAGAGCCACCACTGTaGAGTTCATCTGGCTCTCTAGATGGATCTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: CKTHIKWSEPPL*SSSGSLDGSAA Trigger: AGCGGCAGATCCATCTAGAGAGCCAGATGAACTGCACAGTGGTGGCTCTGACCATTTTATATGGGTTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | GAAAGTCCCAGAAAGCCAGGTTGGCCAAGAGAGAATTaGAGATGCTCCTCATGTAGTAATTGTGACACACGA | + |
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Preference number: 6 (lower is better) Translates to: ESPRKPGWPREN*RCSSCSNCDTR Trigger: TCGTGTGTCACAATTACTACATGAGGAGCATCTCCAATTCTCTCTTGGCCAACCTGGCTTTCTGGGACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS CAA 72 bp | GCCAAAAGCAGAGCTCCAACCCAGATAACGGCAAGTTaGGCAGTGGTGGAAGAGCAATTTTCAATCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: AKSRAPTQITAS*AVVEEQFSIIS Trigger: TGAAATGATTGAAAATTGCTCTTCCACCACTGCCAAACTTGCCGTTATCTGGGTTGGAGCTCTGCTTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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| CDS TCA 72 bp | AGCCAAAATACCACCAAAGCCTTGCACCATCATAGGTaGGAGCCAAAACATAGATTGTGTCCGGTAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: SQNTTKALHHHR*EPKHRLCPVNQ Trigger: CTGATTTACCGGACACAATCTATGTTTTGGCTCTCACCTATGATGGTGCAAGGCTTTGGTGGTATTTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054867.8 |
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| CDS CCA 72 bp | AATTTTCAATCATTTCATAGTACATCTGGACGTTGGTaGCAGCCCGGAAGCGATCTATGCACAGTGCACATA | + |
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Preference number: 6 (lower is better) Translates to: NFQSFHSTSGRW*QPGSDLCTVHI Trigger: TATGTGCACTGTGCATAGATCGCTTCCGGGCTGCCACCAACGTCCAGATGTACTATGAAATGATTGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054867.8 ENSMUST00000200812.2 |
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