Pregenerated sensors for GPR34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040229Ensembl transcript IDs: ENSMUST00000041708.10, ENSMUST00000096492.4
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGCCCTTAGTGCTGTACTaGGGCATTTTGACTGTCACG | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEPLVLY*GILTVT Trigger: CGTGACAGTCAAAATGCCCCAGTACAGCACTAAGGG...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGATAAAGTGCATTCCATaGGAGGAGCAAAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEIKCIP*EEQSQL Trigger: CAGCTGGCTTTGCTCCTCTCATGGAATGCACTTTAT...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGGATCCAGGCAACTGTTaGAAGAGGAGAAAACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEDPGNC*KRRKPA Trigger: TGCTGGTTTTCTCCTCTTTCAACAGTTGCCTGGATC...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTGTACTGGGGCATTTTaGCTGTCACGGACAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEECTGAF*LSRTDH Trigger: ATGATCTGTCCGTGACAGTCAAAATGCCCCAGTACA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR GCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGGTCACGGACAGATCATaGAAGGAATGTCCTGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEVTDRS*KECPGL Trigger: TAAGCCAGGACATTCCTTGCATGATCTGTCCGTGAC...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGCACATTGTGGAATTATaGCCTCCCTTCTTCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEHIVEL*PPFFSV Trigger: GACACTGAAGAAGGGAGGTCATAATTCCACAATGTG...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGACATCAGGAAATACATaGCAGGATCCAGGCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEETSGNT*QDPGNC Trigger: ACAGTTGCCTGGATCCTGTCATGTATTTCCTGATGT...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTTGTTTTGGTTGATGTaGTACATTATGCGGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEELFWLM*YIMRKG Trigger: CCCTTTCCGCATAATGTATCACATCAACCAAAACAA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTCCACTTGTTTTGGTTaGTGTGATACATTATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEESTCFG*CDTLCG Trigger: TCCGCATAATGTATCACATCAACCAAAACAAGTGGA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGGTGAAGAAATGTAAATaGACCGAAAGGCATGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEVKKCK*TERHGK Trigger: CTTACCATGCCTTTCGGTTCATTTACATTTCTTCAC...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR GCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTTCTTTTACGGTGAATaGCCAGAAATACATAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEFFYGE*PEIHRG Trigger: CCCTCTATGTATTTCTGGGCATTCACCGTAAAAGAA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR TCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGCTGCTTGCTTCACTTTaGAACCTTCTAAAAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEELLASL*NLLKRS Trigger: ACTTCTTTTTAGAAGGTTTCAAAGTGAAGCAAGCAG...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGAATGGAAACACATTGTaGAATTATGACCTCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEENGNTL*NYDLPS Trigger: AGAAGGGAGGTCATAATTCCACAATGTGTTTCCATT...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CCA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGCATAAATACTTTGCTTaGTGGTTATTGCCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGILGLCSIILPTSRNEEHKYFA*WLLPFF Trigger: AAAGAAGGGCAATAACCACCAAGCAAAGTATTTATG...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS TCA 90 bp | GACTGTCACGGACAGATCATGCAAGGAATGTCCTGGCTTAAATTCTaGAGTGCTTTCACTTCTGCTTGCTTCACTTTGAAACCTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: DCHGQIMQGMSWLKF*SAFTSACFTLKPSK Trigger: TTTAGAAGGTTTCAAAGTGAAGCAAGCAGAAGTGAAAGCACTTCAGAATTTAAGCCAGGACATTCCTTGCATGATCTGTCCGTGACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS TCA 90 bp | ACTTTACAAAGAATCACACCTAGTGTCCACTTGTTTTGGTTGATGTaGTACATTATGCGGAAAGGGAGGCAGAAGATGAGTAGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TLQRITPSVHLFWLM*YIMRKGRQKMSRRS Trigger: AGACCTTCTACTCATCTTCTGCCTCCCTTTCCGCATAATGTATCACATCAACCAAAACAAGTGGACACTAGGTGTGATTCTTTGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CAA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTGCTTTCACTTCTGCTaGCTTCACTTTGAAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGILGLCSIILPTSRNEECFHFC*LHFETF Trigger: GAAGGTTTCAAAGTGAAGCAAGCAGAAGTGAAAGCA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CAA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGGGTTATTGCCCTTCTTaGTTGTATAGACCGATTGAT | + |
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Preference number: 5 (lower is better) Translates to: LGILGLCSIILPTSRNEEGYCPS*LYRPID Trigger: ATCAATCGGTCTATACAACAAAGAAGGGCAATAACC...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CAA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGGCAAACATAAATACTTaGCTTGGTGGTTATTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LGILGLCSIILPTSRNEEANINT*LGGYCP Trigger: AGGGCAATAACCACCAAGCAAAGTATTTATGTTTGC...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CAA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGCATATTTGCCAGAGTTaGGAAATTTTGACCTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: LGILGLCSIILPTSRNEEHICQS*EILTSV Trigger: AACGGAGGTCAAAATTTCCAAACTCTGGCAAATATG...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS GCA 90 bp | CGTCCATACTATACAGCAAACATAAATACTTTGCTTGGTGGTTATTaGCCTTCTTTGTTGTATAGACCGATTGATTTTTATATAGCGATC | + |
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Preference number: 5 (lower is better) Translates to: RPYYTANINTLLGGY*PSLLYRPIDFYIAI Trigger: GATCGCTATATAAAAATCAATCGGTCTATACAACAAAGAAGGGCAATAACCACCAAGCAAAGTATTTATGTTTGCTGTATAGTATGGACG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS-3UTR CAA 90 bp | TTGGGCATATTAGGACTTTGTTCGATAATTTTACCAACCTCAAGAAATGAAGAGTCTGCTTGCTTCACTTaGAAACCTTCTAAAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LGILGLCSIILPTSRNEESACFT*KPSKKK Trigger: CTTCTTTTTAGAAGGTTTCAAAGTGAAGCAAGCAGA...CTCTTCATTTCTTGAGGTTGGTAAAATTATCGAACAAAGTCCTAATATGCCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS GCA 72 bp | CTGTACTGGGGCATTTTGACTGTCACGGACAGATCATaGAAGGAATGTCCTGGCTTAAATTCTGAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LYWGILTVTDRS*KECPGLNSEVL Trigger: AAGCACTTCAGAATTTAAGCCAGGACATTCCTTGCATGATCTGTCCGTGACAGTCAAAATGCCCCAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS TCA 72 bp | AGAATCACACCTAGTGTCCACTTGTTTTGGTTGATGTaGTACATTATGCGGAAAGGGAGGCAGAAGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: RITPSVHLFWLM*YIMRKGRQKMS Trigger: ACTCATCTTCTGCCTCCCTTTCCGCATAATGTATCACATCAACCAAAACAAGTGGACACTAGGTGTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS TCA 72 bp | TACAAAGAATCACACCTAGTGTCCACTTGTTTTGGTTaGTGTGATACATTATGCGGAAAGGGAGGCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: YKESHLVSTCFG*CDTLCGKGGRR Trigger: TCTTCTGCCTCCCTTTCCGCATAATGTATCACATCAACCAAAACAAGTGGACACTAGGTGTGATTCTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS CAA 72 bp | AGTACAATAAAGGAGTTCCGGGCTGTTGTAGCATATTaGCCAGAGTTTGGAAATTTTGACCTCCGTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: STIKEFRAVVAY*PEFGNFDLRLE Trigger: TTCTAAACGGAGGTCAAAATTTCCAAACTCTGGCAAATATGCTACAACAGCCCGGAACTCCTTTATTGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS CAA 90 bp | AAAATGATCAGTACAATAAAGGAGTTCCGGGCTGTTGTAGCATATTaGCCAGAGTTTGGAAATTTTGACCTCCGTTTAGAAATCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KMISTIKEFRAVVAY*PEFGNFDLRLEILS Trigger: ACTGAGGATTTCTAAACGGAGGTCAAAATTTCCAAACTCTGGCAAATATGCTACAACAGCCCGGAACTCCTTTATTGTACTGATCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS CAA 90 bp | GCTTTCACTTCTGCTTGCTTCACTTTGAAACCTTCTAAAAAGAAGTaGACACATGATTTTGCGAATATTACTGGACATCAGGAAATACAT | + |
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Preference number: 6 (lower is better) Translates to: AFTSACFTLKPSKKK*THDFANITGHQEIH Trigger: ATGTATTTCCTGATGTCCAGTAATATTCGCAAAATCATGTGTCAACTTCTTTTTAGAAGGTTTCAAAGTGAAGCAAGCAGAAGTGAAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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| CDS CAA 72 bp | TCTGCTTGCTTCACTTTGAAACCTTCTAAAAAGAAGTaGACACATGATTTTGCGAATATTACTGGACATCAG | + |
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Preference number: 6 (lower is better) Translates to: SACFTLKPSKKK*THDFANITGHQ Trigger: CTGATGTCCAGTAATATTCGCAAAATCATGTGTCAACTTCTTTTTAGAAGGTTTCAAAGTGAAGCAAGCAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041708.10 ENSMUST00000096492.4 |
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