Pregenerated sensors for GPR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049649Ensembl transcript IDs: ENSMUST00000052090.9, ENSMUST00000105911.2, ENSMUST00000151025.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGGCTCTTGTCCCGCCTCCTCTCGGGCACCTCAGGGTAAGGCCTaGCCCCCAGGCCATGGCTGTGGCGCTGAAAGCCAGGCTGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: TGSCPASSRAPQGKA*PPGHGCGAESQAGV Trigger: CACTCCAGCCTGGCTTTCAGCGCCACAGCCATGGCCTGGGGGCCAGGCCTTACCCTGAGGTGCCCGAGAGGAGGCGGGACAAGAGCCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR CCA 90 bp | CATTTTACAATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATaGCCACCAGAGGGAAGCCGGGCCTCAGCGCAGAGGAATTCTCGG | + |
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Preference number: 1 (lower is better) Translates to: HFTIPTALSVCNSPK*PPEGSRASAQRNSR Trigger: CCGAGAATTCCTCTGCGCTGAGGCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATTGTAAAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR TCA 90 bp | ACTGTAAAATTCCCAGCCTTCTGGAACTGCAAACCACTTGGGCTGTaGGACATTTCCGAGTGGGACCCTGACCATCTGGAACATTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: TVKFPAFWNCKPLGL*DISEWDPDHLEHSR Trigger: TCTAGAATGTTCCAGATGGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTCCAGAAGGCTGGGAATTTTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR CCA 90 bp | AATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGGGGACCCTGACCATCTaGAACATTCTAGAGCCACGC | + |
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Preference number: 2 (lower is better) Translates to: NPDCLVGLQFPQMATRGKGTLTI*NILEPR Trigger: GCGTGGCTCTAGAATGTTCCAGATGGTCAGGGTCCC...CTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGAATTCAAAAGCGACATaGTCAAGGTCAAGTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PDCLVGLQFPQMATRGKPNSKAT*SRSSFW Trigger: CCAGAAACTTGACCTTGATCATGTCGCTTTTGAATT...CGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAAGATCAAGGACTTGGAATGGTACTGTAAAATTCCCAGCCTTCTGGAAAACTCCAGAACCAGCTaGGTCTTAAGGGCGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GRKIKDLEWYCKIPSLLENSRTS*VLRAWS Trigger: GCTCCACGCCCTTAAGACCCAGCTGGTTCTGGAGTT...TTCCAGAAGGCTGGGAATTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTCAAAAGCGACATGATCAAGGTCAAGTTTCTGGGAAGGAAGATCAAGGACGAACTGCAAACCACTTaGGCTGTGAGACATTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: KFKSDMIKVKFLGRKIKDELQTT*AVRHFR Trigger: TCGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTC...GTCCTTGATCTTCCTTCCCAGAAACTTGACCTTGATCATGTCGCTTTTGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAAGATCAAGGACTTGGAATGGTACTGTAAAATTCCCAGCCTTCTGGAAGTGGACCTAACACTCTaGAGTTCTATAGTAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRKIKDLEWYCKIPSLLEVDLTL*SSIVVK Trigger: TTTGACTACTATAGAACTCCAGAGTGTTAGGTCCAC...TTCCAGAAGGCTGGGAATTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR CCA 72 bp | TGTCCCGCCTCCTCTCGGGCACCTCAGGGTAAGGCCTaGCCCCCAGGCCATGGCTGTGGCGCTGAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: CPASSRAPQGKA*PPGHGCGAESQ Trigger: CTGGCTTTCAGCGCCACAGCCATGGCCTGGGGGCCAGGCCTTACCCTGAGGTGCCCGAGAGGAGGCGGGACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR GCA 72 bp | CAGAGGCTGGTGTGTTCTCCCTGCAAACCCGAGCAGTaGGGGCCTGGGGAGGAGGCTCTGGTTTCTATGATT | + |
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Preference number: 3 (lower is better) Translates to: QRLVCSPCKPEQ*GPGEEALVSMI Trigger: AATCATAGAAACCAGAGCCTCCTCCCCAGGCCCGCACTGCTCGGGTTTGCAGGGAGAACACACCAGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCCTCAGCGCAGAGGAATGGAACTGCAAACCACTaGGGCTGTGAGACATTTCCG | + |
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Preference number: 3 (lower is better) Translates to: CNSPKWPPEGSRASAQRNGTANH*GCETFP Trigger: CGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTCC...ATTCCTCTGCGCTGAGGCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR CCA 72 bp | AACTCCAGAACCAGCTGGGTCTTAAGGGCGTGGAGCTaGGGATTGGAATTAAGCCCTGGTGGACCTAACACT | + |
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Preference number: 3 (lower is better) Translates to: NSRTSWVLRAWS*GLELSPGGPNT Trigger: AGTGTTAGGTCCACCAGGGCTTAATTCCAATCCCCAGCTCCACGCCCTTAAGACCCAGCTGGTTCTGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| 3UTR CCA 72 bp | TCAAGGTCAAGTTTCTGGGAAGGAAGATCAAGGACTTaGAATGGTACTGTAAAATTCCCAGCCTTCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: SRSSFWEGRSRT*NGTVKFPAFWN Trigger: GTTCCAGAAGGCTGGGAATTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCCCAGAAACTTGACCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAAGCCGGGCCTCAGCGCAGAGGAATTCTCGGTTGCTCAGGTGATGGCCCACCAGCAGGAACATaGGGGCGCGGAAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QREAGPQRRGILGCSGDGPPAGT*GRGRQE Trigger: CTCCTGCCTTCCGCGCCCCCATGTTCCTGCTGGTGG...GCCATCACCTGAGCAACCGAGAATTCCTCTGCGCTGAGGCCCGGCTTCCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | GACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCCAGGAGTGCCCACAATaGTGGCCACCACCAGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: DCLVGLQFPQMATRGKPGQECPQ*WPPPAR Trigger: ACGCGCTGGTGGTGGCCATCATTGTGGGCACTCCTG...GCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | CCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGCCTGCCAGCAGGTCTaGTACGGCCAAGCTACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PDCLVGLQFPQMATRGKPACQQV*YGQATH Trigger: GTGGGTAGCTTGGCCGTAGCAGACCTGCTGGCAGGC...CGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCCTCAGCGCAGAGGAATCGATGCCCTTGCGGGTaGCCACGTAGTGAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSPKWPPEGSRASAQRNRCPCG*PRSERQ Trigger: CTGCCTCTCACTACGTGGCCACCCGCAAGGGCATCG...ATTCCTCTGCGCTGAGGCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | GACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCCATGGCGGCAGACGATaGGGCAGATCTGGGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: DCLVGLQFPQMATRGKPGHGGRR*GRSGHR Trigger: TCTATGCCCAGATCTGCCGCATCGTCTGCCGCCATG...GCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | CCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGTGCTCACGTTCACACTaGCTGAGCCAGCTGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: PDCLVGLQFPQMATRGKPCSRSH*LSQLRT Trigger: GGTTCTCAGCTGGCTCAGGCAGTGTGAACGTGAGCA...CGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACTGCAAACCACTTGGGCTGTGAGACATTTCCGAGTGGGACCCTGACCGGCAGCAGGTGTCGTTaGAGGGCGATCTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGTANHLGCETFPSGTLTGSRCR*RAICWA Trigger: TGCCCAGCAGATCGCCCTCCAACGACACCTGCTGCC...GGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | AATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGTGCCGATGCTGGCAGTaGAGGCCATTGCTAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: NPDCLVGLQFPQMATRGKCRCWQ*RPLLAR Trigger: GCGTGCTAGCAATGGCCTTCACTGCCAGCATCGGCA...CTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGGGCCTCAGCGCAGAGGAATTCTCGGTTGCTCAGGTGATGGCTTCTTAGGAGGCAGTAGACAGTaGAGGGCAACCAACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EAGPQRRGILGCSGDGFLGGSRQ*RATNRQ Trigger: CTGCCTGTTGGTTGCCCTTCACTGTCTACTGCCTCC...TAAGAAGCCATCACCTGAGCAACCGAGAATTCCTCTGCGCTGAGGCCCGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | AATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCAGGGTGCCTGAGATaGACAGCACCACATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NPDCLVGLQFPQMATRGKPGCLR*TAPHPR Trigger: CCTGGGATGTGGTGCTGTGCATCTCAGGCACCCTGG...CTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACTGCAAACCACTTGGGCTGTGAGACATTTCCGAGTGGGACCCTGACCAGACCACACCACACGTaGTCAGGCCATCCCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGTANHLGCETFPSGTLTRPHHT*SGHPGS Trigger: ACTGCCGGGATGGCCTGACCACGTGTGGTGTGGTCT...GGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | TTTTACAATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGACGTTGGAGGGCGATCTaGTGGGCATGGCGGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: FYNPDCLVGLQFPQMATRRWRAI*WAWRQT Trigger: CGTCTGCCGCCATGCCCAGCAGATCGCCCTCCAACG...TCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATTGTAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TTTTACAATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGATGGAGGGCGATCTGCTaGGCATGGCGGCAGACGATG | + |
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Preference number: 4 (lower is better) Translates to: FYNPDCLVGLQFPQMATRWRAIC*AWRQTM Trigger: CATCGTCTGCCGCCATGCCCAGCAGATCGCCCTCCA...TCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATTGTAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | TGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCCTCAGCGCAGAGGAATTCTCTGAGTAGTAAGTaGGAGCATTGTACAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CNSPKWPPEGSRASAQRNSLSSK*EHCTGK Trigger: TTTCCCTGTACAATGCTCTCACTTACTACTCAGAGA...ATTCCTCTGCGCTGAGGCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | AATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGACCGGAATGGAATCTTaGAAGTGGAACAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NPDCLVGLQFPQMATRGKTGMES*KWNSSS Trigger: GCTGCTGCTGTTCCACTTCCAAGATTCCATTCCGGT...CTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | TTGGGCTGTGAGACATTTCCGAGTGGGACCCTGACCATCTGGAACATTCTAGAGCAAGCTCATCTCTGGTaGGCCAATGCAGAAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGCETFPSGTLTIWNILEQAHLW*ANAEVS Trigger: GCTGACTTCTGCATTGGCTCACCAGAGATGAGCTTG...CTCTAGAATGTTCCAGATGGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGAAGATCAAGGACTTGGAATGGTACTGTAAAATTCCCAGCCTTCTGGAACAGCCAATGTGGCGATaGCCTTGCGGGTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: GRKIKDLEWYCKIPSLLEQPMWR*PCGWPR Trigger: ACGTGGCCACCCGCAAGGGCATCGCCACATTGGCTG...TTCCAGAAGGCTGGGAATTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TCTGGAACTGCAAACCACTTGGGCTGTGAGACATTTCCGAGTGGGACCCTGACCATGGAATCTTGGAAGTaGAACAGCAGCAGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SGTANHLGCETFPSGTLTMESWK*NSSSRW Trigger: CCATCTGCTGCTGCTGTTCCACTTCCAAGATTCCAT...GGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAAGTGGTTTGCAGTTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR TCA 90 bp | TTGGAATTAAGCCCTGGTGGACCTAACACTCTGGAGTTCTATAGTAGTCAAAGCGGACACCAGGGTGCCTaGGATGCACAGCACCACATC | + |
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Preference number: 4 (lower is better) Translates to: LELSPGGPNTLEFYSSQSGHQGA*DAQHHI Trigger: GATGTGGTGCTGTGCATCTCAGGCACCCTGGTGTCC...GCTTTGACTACTATAGAACTCCAGAGTGTTAGGTCCACCAGGGCTTAATTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACAATCCCGACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGGCCCACAGCACCTTCTaGACATCTTGGTTGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ILQSRLPCRFAIPPNGHQAHSTF*TSWLRK Trigger: CTTTCGCAACCAAGATGTGCAGAAGGTGCTGTGGGC...CTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTCGGGATTGTAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TTGGAATTAAGCCCTGGTGGACCTAACACTCTGGAGTTCTATAGTAGTCAAAGCGGGCAGCAGTGTAGCTaGGCCTGTGGGTTCCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LELSPGGPNTLEFYSSQSGQQCS*ACGFLY Trigger: GTAGAGGAACCCACAGGCCCAGCTACACTGCTGCCC...GCTTTGACTACTATAGAACTCCAGAGTGTTAGGTCCACCAGGGCTTAATTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | TTGGGCTGTGAGACATTTCCGAGTGGGACCCTGACCATCTGGAACATTCTAGAGCCACCAGATGGTTCTTaGAGAGTGGATAGACCACAC | + |
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Preference number: 4 (lower is better) Translates to: LGCETFPSGTLTIWNILEPPDGS*RVDRPH Trigger: GTGTGGTCTATCCACTCTCCAAGAACCATCTGGTGG...CTCTAGAATGTTCCAGATGGTCAGGGTCCCACTCGGAAATGTCTCACAGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCGAAATTCAAAAGCGACATGATCAAGGTCAAGTTTCTGGGAAGGAAGATAAGTCAGCCGCAAAGTaGAGGACCAGGCCCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SFEIQKRHDQGQVSGKEDKSAAK*RTRPRP Trigger: AGGCCTGGGCCTGGTCCTGCACTTTGCGGCTGACTT...ATCTTCCTTCCCAGAAACTTGACCTTGATCATGTCGCTTTTGAATTTCGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGAAGATCAAGGACTTGGAATGGTACTGTAAAATTCCCAGCCTTCTGGAAATGGTTCTTGGAGAGTaGATAGACCACACCACACGT | + |
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Preference number: 4 (lower is better) Translates to: GRKIKDLEWYCKIPSLLEMVLGE*IDHTTR Trigger: ACGTGTGGTGTGGTCTATCCACTCTCCAAGAACCAT...TTCCAGAAGGCTGGGAATTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCGAAATTCAAAAGCGACATGATCAAGGTCAAGTTTCTGGGAAGGAAGATGGAGTTGTAGGTGGCTaGGAGCAGGGTAAGATAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFEIQKRHDQGQVSGKEDGVVGG*EQGKIG Trigger: ACCTATCTTACCCTGCTCCCAGCCACCTACAACTCC...ATCTTCCTTCCCAGAAACTTGACCTTGATCATGTCGCTTTTGAATTTCGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR GCA 90 bp | AAATTCAAAAGCGACATGATCAAGGTCAAGTTTCTGGGAAGGAAGATCAAGGACTCTCTGGTGAGCCAATaGAGAAGTCAGCCGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KFKSDMIKVKFLGRKIKDSLVSQ*RSQPQS Trigger: ACTTTGCGGCTGACTTCTGCATTGGCTCACCAGAGA...GTCCTTGATCTTCCTTCCCAGAAACTTGACCTTGATCATGTCGCTTTTGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS CCA 90 bp | GCACAGCACCACATCCCAGGCCCTGGGAGAGGGCAGCAGTGTAGCTaGGCCTGTGGGTTCCTCTACTGGGTCCACGCTGCTCACGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: AQHHIPGPGRGQQCS*ACGFLYWVHAAHVH Trigger: GTGAACGTGAGCAGCGTGGACCCAGTAGAGGAACCCACAGGCCCAGCTACACTGCTGCCCTCTCCCAGGGCCTGGGATGTGGTGCTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 ENSMUST00000151025.2 |
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| CDS GCA 90 bp | TTGCTAGCACGCCGACCAGCATCAAGCTCATCTCTGGTGAGCCAATaGAGAAGTCAGCCGCAAAGTGCAGGACCAGGCCCAGGCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLARRPASSSSLVSQ*RSQPQSAGPGPGLP Trigger: TGGCAGGCCTGGGCCTGGTCCTGCACTTTGCGGCTGACTTCTGCATTGGCTCACCAGAGATGAGCTTGATGCTGGTCGGCGTGCTAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS-3UTR CAA 90 bp | GACTGCCTTGTCGGTTTGCAATTCCCCCAAATGGCCACCAGAGGGAAGCCGGGCGACCGGAATGGAATCTaGGAAGTGGAACAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: DCLVGLQFPQMATRGKPGDRNGI*EVEQQQ Trigger: CTGCTGCTGTTCCACTTCCAAGATTCCATTCCGGTC...GCCCGGCTTCCCTCTGGTGGCCATTTGGGGGAATTGCAAACCGACAAGGCAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS CCA 90 bp | CATGAAGAAGGCGATGGCCAGAACCACCAGATGGTTCTTGGAGAGTaGATAGACCACACCACACGTGGTCAGGCCATCCCGGCAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: HEEGDGQNHQMVLGE*IDHTTRGQAIPAVP Trigger: TGGAACTGCCGGGATGGCCTGACCACGTGTGGTGTGGTCTATCCACTCTCCAAGAACCATCTGGTGGTTCTGGCCATCGCCTTCTTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS CCA 90 bp | ACCGGGACCGGAATGGAATCTTGGAAGTGGAACAGCAGCAGCAGATaGCCCACAGCACCTTCTGCACATCTTGGTTGCGAAAGGCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TGTGMESWKWNSSSR*PTAPSAHLGCERRR Trigger: TCTACGCCTTTCGCAACCAAGATGTGCAGAAGGTGCTGTGGGCCATCTGCTGCTGCTGTTCCACTTCCAAGATTCCATTCCGGTCCCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS-3UTR CAA 90 bp | AGCTTCGAAATTCAAAAGCGACATGATCAAGGTCAAGTTTCTGGGAAGGAAGATAGGCAGCAGGTGTCGTaGGAGGGCGATCTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SFEIQKRHDQGQVSGKEDRQQVS*EGDLLG Trigger: GCCCAGCAGATCGCCCTCCAACGACACCTGCTGCCT...ATCTTCCTTCCCAGAAACTTGACCTTGATCATGTCGCTTTTGAATTTCGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGTCAAGTTTCTGGGAAGGAAGATCAAGGACTTGGAATGGTACTGTAAAACACCTTCTGCACATCTaGGTTGCGAAAGGCGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SRSSFWEGRSRTWNGTVKHLLHI*VAKGVD Trigger: ATCTACGCCTTTCGCAACCAAGATGTGCAGAAGGTG...TTTTACAGTACCATTCCAAGTCCTTGATCTTCCTTCCCAGAAACTTGACCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105911.2 |
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| CDS CCA 72 bp | GAGGCAGGCAGCAGGTGTCGTTGGAGGGCGATCTGCTaGGCATGGCGGCAGACGATGCGGCAGATCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EAGSRCRWRAIC*AWRQTMRQIWA Trigger: TGCCCAGATCTGCCGCATCGTCTGCCGCCATGCCCAGCAGATCGCCCTCCAACGACACCTGCTGCCTGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS GCA 72 bp | CAGCAAAGGCGCCAAGCACCACAGCCAATGTGGCGATaGCCTTGCGGGTGGCCACGTAGTGAGAGGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QQRRQAPQPMWR*PCGWPRSERQA Trigger: TGCCTGCCTCTCACTACGTGGCCACCCGCAAGGGCATCGCCACATTGGCTGTGGTGCTTGGCGCCTTTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS CCA 72 bp | GGAATGGAATCTTGGAAGTGGAACAGCAGCAGCAGATaGCCCACAGCACCTTCTGCACATCTTGGTTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GMESWKWNSSSR*PTAPSAHLGCE Trigger: TTCGCAACCAAGATGTGCAGAAGGTGCTGTGGGCCATCTGCTGCTGCTGTTCCACTTCCAAGATTCCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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| CDS TCA 72 bp | GGCCAGCATCACATAAGTCCGAGTTACCGTTGTCTCTaGGTAGTAAGTGAGAGCATTGTACAGGGAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GQHHISPSYRCL*VVSESIVQGKV Trigger: TACCTTTCCCTGTACAATGCTCTCACTTACTACTCAGAGACAACGGTAACTCGGACTTATGTGATGCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052090.9 ENSMUST00000105911.2 |
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