Pregenerated sensors for GPR27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072875Ensembl transcript IDs: ENSMUST00000101122.3
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAGTAGAACAGCACCACCTAACTTAGCAAACACCGCAGGAAAATaGTTGTCTCCTGGGAGAGGCACCGTTATATCCCATATCTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: MSRTAPPNLANTAGK*LSPGRGTVISHIFL Trigger: TAAGAAGATATGGGATATAACGGTGCCTCTCCCAGGAGACAAGCATTTTCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR CCA 90 bp | TACTGTTTAAAAGTCACAGTCTCACAGAAAGTTTCCATCCAAGACTaGTCTACAGAGCAGCTGTTTGCTGATGCATTGTTTTATAATAAC | + |
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Preference number: 1 (lower is better) Translates to: YCLKVTVSQKVSIQD*STEQLFADALFYNN Trigger: GTTATTATAAAACAATGCATCAGCAAACAGCTGCTCTGTAGACCAGTCTTGGATGGAAACTTTCTGTGAGACTGTGACTTTTAAACAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAACAGCCATGAGTAGAACAGCACCACCTAACTTAGCAAACACCGCAGGATGTGGCCTGCAGTTCTaGGGGGACTTTAGACAACTC | + |
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Preference number: 2 (lower is better) Translates to: LKTAMSRTAPPNLANTAGCGLQF*GDFRQL Trigger: GAGTTGTCTAAAGTCCCCTCAGAACTGCAGGCCACA...TCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACTCATGGCTGTTTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCCCTCTCTTCCATCTCCAACATCTCCTAGCTCGCTCTCCTTCACTGCAGTAGAAAACTGGCCATaGTCTCTAGGAAACTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LCPSLPSPTSPSSLSFTAVENWP*SLGNFA Trigger: TGCAAAGTTTCCTAGAGACCATGGCCAGTTTTCTAC...TGCAGTGAAGGAGAGCGAGCTAGGAGATGTTGGAGATGGAAGAGAGGGACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR CAA 90 bp | AGTAGAACAGCACCACCTAACTTAGCAAACACCGCAGGAAAATGCTaGTCTCCTGGGAGAGGCACCGTTATATCCCATATCTTCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: SRTAPPNLANTAGKC*SPGRGTVISHIFLT Trigger: GGTTAAGAAGATATGGGATATAACGGTGCCTCTCCCAGGAGACAAGCATTTTCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR CAA 90 bp | TCTCACAGAAAGTTTCCATCCAAGACTGGTCTACAGAGCAGCTGTTaGCTGATGCATTGTTTTATAATAACTTACACAGGGCCCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: SHRKFPSKTGLQSSC*LMHCFIITYTGPQT Trigger: GGTCTGGGGCCCTGTGTAAGTTATTATAAAACAATGCATCAGCAAACAGCTGCTCTGTAGACCAGTCTTGGATGGAAACTTTCTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR GCA 72 bp | CCAAACAAGGCACACAGCTCACCTGGCCCTGTGGCCTaGAGTTCTGAGGGGACTTTAGACAACTCTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: PNKAHSSPGPVA*SSEGTLDNSVP Trigger: AGGGACAGAGTTGTCTAAAGTCCCCTCAGAACTGCAGGCCACAGGGCCAGGTGAGCTGTGTGCCTTGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR TCA 72 bp | CAGAGAAAAACCAGACAACGGGACAGAAGGGAAAGATaGGCGGTCACAATCGAAGCCAGAGGGAGCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: QRKTRQRDRRER*AVTIEARGSLG Trigger: ACCCAGGCTCCCTCTGGCTTCGATTGTGACCGCTCATCTTTCCCTTCTGTCCCGTTGTCTGGTTTTTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR GCA 72 bp | ACAGCACCACCTAACTTAGCAAACACCGCAGGAAAATaGTTGTCTCCTGGGAGAGGCACCGTTATATCCCAT | + |
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Preference number: 3 (lower is better) Translates to: TAPPNLANTAGK*LSPGRGTVISH Trigger: ATGGGATATAACGGTGCCTCTCCCAGGAGACAAGCATTTTCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | CTCTGTCCCTCTCTTCCATCTCCAACATCTCCTAGCTCGCTCTCCTTCACTGCATGGCCAGGTAGCGGGTaGCGCCCACGCCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCPSLPSPTSPSSLSFTAWPGSG*RPRPAA Trigger: TGCTGCTGGGCGTGGGCGTCACCCGCTACCTGGCCA...TGCAGTGAAGGAGAGCGAGCTAGGAGATGTTGGAGATGGAAGAGAGGGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | CTCTGTCCCTCTCTTCCATCTCCAACATCTCCTAGCTCGCTCTCCTTCACTGCAGTGGCGCCCGGGCCGTaGAAGGTCCAGTCGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LCPSLPSPTSPSSLSFTAVAPGP*KVQSWL Trigger: CAGCCACGACTGGACCTTCCACGGCCCGGGCGCCAC...TGCAGTGAAGGAGAGCGAGCTAGGAGATGTTGGAGATGGAAGAGAGGGACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGCCCTCCAGAGCCCACCCCATCCGCAAATCACAATCGGTACAAACACGGAGGGTGGCCTGCGTaGCCTGGGGGCTCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FFCPPEPTPSANHNRYKHGGWPA*PGGSGS Trigger: GCTGCCAGAGCCCCCAGGCCACGCAGGCCACCCTCC...GTGTTTGTACCGATTGTGATTTGCGGATGGGGTGGGCTCTGGAGGGCAGAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR GCA 90 bp | AACAGGGGTCTATACAATCCAAGTGCGTGTCCACTTTCAGAGTCTCCTGAAGGCGGAAGGCCAGCAGCTTaGAGCCCAGCGCGCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: NRGLYNPSACPLSESPEGGRPAA*SPARPA Trigger: CGCCGGGCGCGCTGGGCTGCAAGCTGCTGGCCTTCC...GCCTTCAGGAGACTCTGAAAGTGGACACGCACTTGGATTGTATAGACCCCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGCCCTCCAGAGCCCACCCCATCCGCAAATCACAATCGGTACAAACACGGTAGACGAGGTGCGTaGCGCCCACCACCGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFCPPEPTPSANHNRYKHGRRGA*RPPPRP Trigger: TGGCCGCGGTGGTGGGCGCCACGCACCTCGTCTACC...GTGTTTGTACCGATTGTGATTTGCGGATGGGGTGGGCTCTGGAGGGCAGAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | CCCAAACCCCTAACCCAAACAAACCTGTATTTTTCTGCCCTCCAGAGCCCACCCTGCGCTCCCGCACGATaGGCAGCGCGAACAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: PKPLTQTNLYFSALQSPPCAPAR*AARTAR Trigger: ACGTGCTGTTCGCGCTGCTCATCGTGCGGGAGCGCA...GGGTGGGCTCTGGAGGGCAGAAAAATACAGGTTTGTTTGGGTTAGGGGTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR GCA 90 bp | CTCTGTCCCTCTCTTCCATCTCCAACATCTCCTAGCTCGCTCTCCTTCACTGCAGCGCGAACAGCACGTTaGCCGCCAGGCTCACGCACA | + |
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Preference number: 4 (lower is better) Translates to: LCPSLPSPTSPSSLSFTAARTAR*PPGSRT Trigger: TGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGC...TGCAGTGAAGGAGAGCGAGCTAGGAGATGTTGGAGATGGAAGAGAGGGACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | CCCAAACCCCTAACCCAAACAAACCTGTATTTTTCTGCCCTCCAGAGCCCACCCGTGGCCTGGGGGCTCTaGCAGCAGGGAAACTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PKPLTQTNLYFSALQSPPVAWGL*QQGNWA Trigger: AGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCAC...GGGTGGGCTCTGGAGGGCAGAAAAATACAGGTTTGTTTGGGTTAGGGGTTTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | TTGAAAACAGCCATGAGTAGAACAGCACCACCTAACTTAGCAAACACCGCAGGAAGGTCCAGTCGTGGCTaGCGGCGGGCACCAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LKTAMSRTAPPNLANTAGRSSRG*RRAPGA Trigger: CGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCT...TCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACTCATGGCTGTTTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | CTCCTTCACTGCAACGCAAAGGTAATGCCACTTGAGGTTGTCAAAAATAGCCTCAGCCCGCCGTCCAGTTaGCGGCCGCCTGACCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLHCNAKVMPLEVVKNSLSPPSS*RPPDRW Trigger: CCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCT...GAGGCTATTTTTGACAACCTCAAGTGGCATTACCTTTGCGTTGCAGTGAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGCCCTCCAGAGCCCACCCCATCCGCAAATCACAATCGGTACAAACACAGCAGGAAGGCCGCGTaGAAGCAGAAGAGTGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: FFCPPEPTPSANHNRYKHSRKAA*KQKSAA Trigger: GGCCGCACTCTTCTGCTTCCACGCGGCCTTCCTGCT...GTGTTTGTACCGATTGTGATTTGCGGATGGGGTGGGCTCTGGAGGGCAGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGCCCTCCAGAGCCCACCCCATCCGCAAATCACAATCGGTACAAACACATCTTGCGGCGGTCGTaGATGAAGAAGAGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FFCPPEPTPSANHNRYKHILRRS*MKKSRR Trigger: CCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGAT...GTGTTTGTACCGATTGTGATTTGCGGATGGGGTGGGCTCTGGAGGGCAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | TTACTGTTTAAAAGTCACAGTCTCACAGAAAGTTTCCATCCAAGACTGGTCTACCCGGGCCTGCAGGCCTaGTGCCCACGAGCGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLFKSHSLTESFHPRLVYPGLQA*CPRAQV Trigger: CACCTGCGCTCGTGGGCATCAGGCCTGCAGGCCCGG...GTAGACCAGTCTTGGATGGAAACTTTCTGTGAGACTGTGACTTTTAAACAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | TTGAAAACAGCCATGAGTAGAACAGCACCACCTAACTTAGCAAACACCGCAGGAAACACACCACGGGGTTaGTGCCGGCCTGCGCGAATG | + |
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Preference number: 4 (lower is better) Translates to: LKTAMSRTAPPNLANTAGNTPRG*CRPARM Trigger: CATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTT...TCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACTCATGGCTGTTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR GCA 90 bp | GAAGTCGGTACCAGTACAAAAAGACTGCAGGGCCTACTGTCAGGAAGAAAGTATGGGTTGATGCCGGCCTaGGCGAATGTCAGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: EVGTSTKRLQGLLSGRKYGLMPA*ANVSHT Trigger: GGTGTGGCTGACATTCGCGCAGGCCGGCATCAACCC...ATACTTTCTTCCTGACAGTAGGCCCTGCAGTCTTTTTGTACTGGTACCGACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TACAGTACTTGCAATGAAGTCCTTCGGTGTCAAGTGACAATGTCTAACAAAGAGTGGAAGGTCCAGTCGTaGCTGACGGCGGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: YSTCNEVLRCQVTMSNKEWKVQS*LTAGTR Trigger: CCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCA...CTCTTTGTTAGACATTGTCACTTGACACCGAAGGACTTCATTGCAAGTACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR CAA 72 bp | GCACCACCTAACTTAGCAAACACCGCAGGAAAATGCTaGTCTCCTGGGAGAGGCACCGTTATATCCCATATC | + |
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Preference number: 4 (lower is better) Translates to: APPNLANTAGKC*SPGRGTVISHI Trigger: GATATGGGATATAACGGTGCCTCTCCCAGGAGACAAGCATTTTCCTGCGGTGTTTGCTAAGTTAGGTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | TTACTGTTTAAAAGTCACAGTCTCACAGAAAGTTTCCATCCAAGACTGGTCTACTGCGGCGGTCGTGGATaGAGAAGAGCAGGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLFKSHSLTESFHPRLVYCGGRG*RRAGGG Trigger: ACCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCA...GTAGACCAGTCTTGGATGGAAACTTTCTGTGAGACTGTGACTTTTAAACAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CCA 90 bp | TTACTGTTTAAAAGTCACAGTCTCACAGAAAGTTTCCATCCAAGACTGGTCTACTGGCAGCAGGGAAACTaGGCTCGGAAACAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLFKSHSLTESFHPRLVYWQQGN*ARKQSL Trigger: GAGGGACTGTTTCCGAGCCCAGTTTCCCTGCTGCCA...GTAGACCAGTCTTGGATGGAAACTTTCTGTGAGACTGTGACTTTTAAACAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| 3UTR CAA 72 bp | CAAGACTGGTCTACAGAGCAGCTGTTTGCTGATGCATaGTTTTATAATAACTTACACAGGGCCCCAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: QDWSTEQLFADA*FYNNLHRAPDL Trigger: AAGGTCTGGGGCCCTGTGTAAGTTATTATAAAACAATGCATCAGCAAACAGCTGCTCTGTAGACCAGTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR TCA 90 bp | ATACAGAGTAAAACTGGGCTTATCAAAGCACAAGCCATTTCCACAAAAGTATTTGCAGGAAGAGCAGCGTaGTGGCGTAGAACATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IQSKTGLIKAQAISTKVFAGRAA*WRRTSC Trigger: GCAAGATGTTCTACGCCATCACGCTGCTCTTCCTGC...AAATACTTTTGTGGAAATGGCTTGTGCTTTGATAAGCCCAGTTTTACTCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS TCA 90 bp | GGCGTGGGCCCGCGGCCGAAGCCCGCCGTCCAGTTGGCGGCCGCCTaGCCGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCGTGGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: GVGPRPKPAVQLAAA*PVAPGPWKVQSWLT Trigger: CGTCAGCCACGACTGGACCTTCCACGGCCCGGGCGCCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 90 bp | CGAGCGCAGGTGGCGTGGGCCCGCGGCCGAAGCCCGCCGTCCAGTTaGCGGCCGCCTGACCGGTGGCGCCCGGGCCGTGGAAGGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: RAQVAWARGRSPPSS*RPPDRWRPGRGRSS Trigger: ACTGGACCTTCCACGGCCCGGGCGCCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCCACCTGCGCTCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS GCA 90 bp | AGGAGCAGCAGGAAGCCTAGCGCACCCGGGGCGCCGTCGGGTCGCTaGTCCAGGGCGCACGGCGCGTCCTCGTCGTCCGCGCCACCGCCG | + |
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Preference number: 5 (lower is better) Translates to: RSSRKPSAPGAPSGR*SRAHGASSSSAPPP Trigger: CGGCGGTGGCGCGGACGACGAGGACGCGCCGTGCGCCCTGGAGCAGCGACCCGACGGCGCCCCGGGTGCGCTAGGCTTCCTGCTGCTCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS TCA 90 bp | CCGCCTGACCGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCGTGGCTaGCGGCGGGCACCAGGCGCGCGGGTCGCATCTTGCGGCGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: PPDRWRPGRGRSSRG*RRAPGARVASCGGR Trigger: ACGACCGCCGCAAGATGCGACCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCACGGCCCGGGCGCCACCGGTCAGGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS TCA 90 bp | CGGCGGGCACCAGGCGCGCGGGTCGCATCTTGCGGCGGTCGTGGATaGAGAAGAGCAGGCGGAGGTAGACGAGGTGCGTGGCGCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: RRAPGARVASCGGRG*RRAGGGRRGAWRPP Trigger: TGGTGGGCGCCACGCACCTCGTCTACCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGATGCGACCCGCGCGCCTGGTGCCCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 90 bp | CCTTTCAGGTCGCAGGGGAGGGTGGCCTGCGTGGCCTGGGGGCTCTaGCAGCAGGGAAACTGGGCTCGGAAACAGTCCCTCAGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PFRSQGRVACVAWGL*QQGNWARKQSLSSR Trigger: CCGGGAGCTGAGGGACTGTTTCCGAGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCACGCAGGCCACCCTCCCCTGCGACCTGAAAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CAA 90 bp | AACAGGGGTCTATACAATCCAAGTGCGTGTCCACTTTCAGAGTCTCCTGAAGGCCGCGCGGGTCGCATCTaGCGGCGGTCGTGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: NRGLYNPSACPLSESPEGRAGRI*RRSWMK Trigger: CTTCATCCACGACCGCCGCAAGATGCGACCCGCGCG...GCCTTCAGGAGACTCTGAAAGTGGACACGCACTTGGATTGTATAGACCCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CAA 90 bp | AAAAATAGCCTCTGTAGAAAACTGGCCATGGTCTCTAGGAAACTTTGCATGAATAGGAAGGCCAGCAGCTaGCAGCCCAGCGCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: KNSLCRKLAMVSRKLCMNRKASS*QPSAPG Trigger: GCCGGGCGCGCTGGGCTGCAAGCTGCTGGCCTTCCT...ATTCATGCAAAGTTTCCTAGAGACCATGGCCAGTTTTCTACAGAGGCTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CAA 90 bp | GAAGTCGGTACCAGTACAAAAAGACTGCAGGGCCTACTGTCAGGAAGAAAGTATAAACACACCACGGGGTaGATGCCGGCCTGCGCGAAT | + |
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Preference number: 5 (lower is better) Translates to: EVGTSTKRLQGLLSGRKYKHTTG*MPACAN Trigger: ATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTTT...ATACTTTCTTCCTGACAGTAGGCCCTGCAGTCTTTTTGTACTGGTACCGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS-3UTR CAA 90 bp | ATACAGAGTAAAACTGGGCTTATCAAAGCACAAGCCATTTCCACAAAAGTATTTAGCGCGAACAGCACGTaGCCCGCCAGGCTCACGCAC | + |
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Preference number: 5 (lower is better) Translates to: IQSKTGLIKAQAISTKVFSANST*PARLTH Trigger: GTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCT...AAATACTTTTGTGGAAATGGCTTGTGCTTTGATAAGCCCAGTTTTACTCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS TCA 72 bp | CCGCGGCCGAAGCCCGCCGTCCAGTTGGCGGCCGCCTaGCCGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: PRPKPAVQLAAA*PVAPGPWKVQS Trigger: CGACTGGACCTTCCACGGCCCGGGCGCCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS GCA 72 bp | AGGAAGCCTAGCGCACCCGGGGCGCCGTCGGGTCGCTaGTCCAGGGCGCACGGCGCGTCCTCGTCGTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RKPSAPGAPSGR*SRAHGASSSSA Trigger: CGCGGACGACGAGGACGCGCCGTGCGCCCTGGAGCAGCGACCCGACGGCGCCCCGGGTGCGCTAGGCTTCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 72 bp | GCCCGGGCCTGCAGGCCTGATGCCCACGAGCGCAGGTaGCGTGGGCCCGCGGCCGAAGCCCGCCGTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ARACRPDAHERR*RGPAAEARRPV Trigger: AACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCCACCTGCGCTCGTGGGCATCAGGCCTGCAGGCCCGGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS TCA 72 bp | CGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCGTGGCTaGCGGCGGGCACCAGGCGCGCGGGTCGCATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RWRPGRGRSSRG*RRAPGARVASC Trigger: GCAAGATGCGACCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCACGGCCCGGGCGCCACCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CAA 90 bp | CGGTGCAGGCTGCGCTCCCGCACGATGAGCAGCGCGAACAGCACGTaGCCCGCCAGGCTCACGCACAGCAGCAGGCTGAGCGTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RCRLRSRTMSSANST*PARLTHSSRLSVAS Trigger: GCTGGCCACGCTCAGCCTGCTGCTGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCTGCTCATCGTGCGGGAGCGCAGCCTGCACCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CAA 72 bp | TGGCTGACGGCGGGCACCAGGCGCGCGGGTCGCATCTaGCGGCGGTCGTGGATGAAGAAGAGCAGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WLTAGTRRAGRI*RRSWMKKSRRR Trigger: CCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGATGCGACCCGCGCGCCTGGTGCCCGCCGTCAGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 72 bp | TCGCAGGGGAGGGTGGCCTGCGTGGCCTGGGGGCTCTaGCAGCAGGGAAACTGGGCTCGGAAACAGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQGRVACVAWGL*QQGNWARKQSL Trigger: GAGGGACTGTTTCCGAGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCACGCAGGCCACCCTCCCCTGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CAA 72 bp | CTGCGCTCCCGCACGATGAGCAGCGCGAACAGCACGTaGCCCGCCAGGCTCACGCACAGCAGCAGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRSRTMSSANST*PARLTHSSRLS Trigger: GCTCAGCCTGCTGCTGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCTGCTCATCGTGCGGGAGCGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 72 bp | GGACAGCTCCCGGGCGCACCAGGACGCGCAGGTAACTaGCCACCACATAGGGGCCCCAGAGGAGCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GQLPGAPGRAGN*PPHRGPRGAGR Trigger: TCTTCCTGCTCCTCTGGGGCCCCTATGTGGTGGCCAGTTACCTGCGCGTCCTGGTGCGCCCGGGAGCTGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CCA 72 bp | CAATGCCTTTCAGGTCGCAGGGGAGGGTGGCCTGCGTaGCCTGGGGGCTCTGGCAGCAGGGAAACTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QCLSGRRGGWPA*PGGSGSRETGL Trigger: GAGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCACGCAGGCCACCCTCCCCTGCGACCTGAAAGGCATTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CAA 72 bp | CTCAGCTCCCGGTTGAAGAGGAAACACACCACGGGGTaGATGCCGGCCTGCGCGAATGTCAGCCACACCGAG | + |
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Preference number: 6 (lower is better) Translates to: LSSRLKRKHTTG*MPACANVSHTE Trigger: CTCGGTGTGGCTGACATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTTTCCTCTTCAACCGGGAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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| CDS CAA 90 bp | AAACAGTCCCTCAGCTCCCGGTTGAAGAGGAAACACACCACGGGGTaGATGCCGGCCTGCGCGAATGTCAGCCACACCGAGGCTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KQSLSSRLKRKHTTG*MPACANVSHTEAVR Trigger: CCTGACAGCCTCGGTGTGGCTGACATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTTTCCTCTTCAACCGGGAGCTGAGGGACTGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101122.3 |
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