RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR26 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040125

Ensembl transcript IDs: ENSMUST00000045840.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCAATCGCCGCAGCGCTGGCTAGTGCCCATTGCCAGTGGAGCTaGTCTCTCCTCACCTCCCTTGGGTTTTCAAGCTTGGGTCTAAGT +
Preference number: 1 (lower is better)
Translates to: EAIAAALASAHCQWS*SLLTSLGFSSLGLS
Trigger: ACTTAGACCCAAGCTTGAAAACCCAAGGGAGGTGAGGAGAGAGCAGCTCCACTGGCAATGGGCACTAGCCAGCGCTGCGGCGATTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp GATATCCCTGCTGAACCTGTAAGAGCAGGCTGGAGGGAGATGCTGTaGCCTTCCACCCTCTCCCTACCGCAAACCCCGCCCTTCATCTCT +
Preference number: 1 (lower is better)
Translates to: DIPAEPVRAGWREML*PSTLSLPQTPPFIS
Trigger: AGAGATGAAGGGCGGGGTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTTACAGGTTCAGCAGGGATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp ACAGGGAGGAAGGGTGTACCTTACCAGGTCCCCCAGAAGGCTACCTaGGGAGAGCTGGAGACAAAGTCCAGACAAGTGTCCTGGCAGTCC +
Preference number: 1 (lower is better)
Translates to: TGRKGVPYQVPQKAT*GELETKSRQVSWQS
Trigger: GGACTGCCAGGACACTTGTCTGGACTTTGTCTCCAGCTCTCCCCAGGTAGCCTTCTGGGGGACCTGGTAAGGTACACCCTTCCTCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp CCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTaGACTTTCGCCCTAGGTAGTGTGCATTCGTGGGCATGCACACGG +
Preference number: 1 (lower is better)
Translates to: PSAPCVWYPGFSCLG*TFALGSVHSWACTR
Trigger: CCGTGTGCATGCCCACGAATGCACACTACCTAGGGCGAAAGTTCAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp AACATTTATGGGGAGGCAATCGCCGCAGCGCTGGCTAGTGCCCATTaGCAGTGGAGCTGCTCTCTCCTCACCTCCCTTGGGTTTTCAAGC +
Preference number: 1 (lower is better)
Translates to: NIYGEAIAAALASAH*QWSCSLLTSLGFSS
Trigger: GCTTGAAAACCCAAGGGAGGTGAGGAGAGAGCAGCTCCACTGGCAATGGGCACTAGCCAGCGCTGCGGCGATTGCCTCCCCATAAATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CCTAGCTCCCTAGGTGACAACGGGCTGCTTGAGCTTGGGAGGAAGTaGGAACTGTCAGGGAGGTGGGGAAATTACAAAGCAGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PSSLGDNGLLELGRK*ELSGRWGNYKAGSS
Trigger: GGAGGAGCCTGCTTTGTAATTTCCCCACCTCCCTGACAGTTCCCACTTCCTCCCAAGCTCAAGCAGCCCGTTGTCACCTAGGGAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp CCTTCCACCCTCTCCCTACCGCAAACCCCGCCCTTCATCTCTGTGTaGGTCCTGGGGCTTCAGGAAATGCGAAGCCTTATTTGGATCCCA +
Preference number: 1 (lower is better)
Translates to: PSTLSLPQTPPFISV*VLGLQEMRSLIWIP
Trigger: TGGGATCCAAATAAGGCTTCGCATTTCCTGAAGCCCCAGGACTCACACAGAGATGAAGGGCGGGGTTTGCGGTAGGGAGAGGGTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGAGATACTaGCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACAC +
Preference number: 1 (lower is better)
Translates to: HPSGHKWHSPYLGRY*PLLSTLWTVFLDAH
Trigger: GTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp AGGTTAACTGCCCCAGGTGGCAGGGAGAGCAAAACCAGGTACCTTTaGGGATGGCTGCTTGCAACTCAGAGCAACTGGGTTTCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: RLTAPGGRESKTRYL*GWLLATQSNWVSCR
Trigger: CCTGCAGGAAACCCAGTTGCTCTGAGTTGCAAGCAGCCATCCCCAAAGGTACCTGGTTTTGCTCTCCCTGCCACCTGGGGCAGTTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp TGCACCGTGCTTCTTTGGGGAGGGAGGGAGCATGAGTATAGCCGATaGCGTCTGTTGTCACCTGCCACACTGGACAAAAGAGCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: CTVLLWGGREHEYSR*RLLSPATLDKRAEG
Trigger: TCCCTCTGCTCTTTTGTCCAGTGTGGCAGGTGACAACAGACGCCATCGGCTATACTCATGCTCCCTCCCTCCCCAAAGAAGCACGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp CCAAGCAAGCACAGTGCTTGCTGTGCATCTAAACCTGGGGACAGGTaGCAACCAGTCCACAGGCTTGGCTCTACCCTGTCTGCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: PSKHSACCASKPGDR*QPVHRLGSTLSAFS
Trigger: AGAGAAGGCAGACAGGGTAGAGCCAAGCCTGTGGACTGGTTGTCACCTGTCCCCAGGTTTAGATGCACAGCAAGCACTGTGCTTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GTGGGGAAATTACAAAGCAGGCTCCTCCCACACAGATATCCCTGCTaGACCTGTAAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: VGKLQSRLLPHRYPC*TCKSRLEGDAVPFH
Trigger: GTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTTACAGGTTCAGCAGGGATATCTGTGTGGGAGGAGCCTGCTTTGTAATTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp TTCCTGCAGGAGACCCTGATGAGCCTGGCGGGGTACCGGATCCCATaGATGCCTCTGTTCTCCAGGAGGGACTGTGTTTACACGTTTCTT +
Preference number: 1 (lower is better)
Translates to: FLQETLMSLAGYRIP*MPLFSRRDCVYTFL
Trigger: AAGAAACGTGTAAACACAGTCCCTCCTGGAGAACAGAGGCATTCATGGGATCCGGTACCCCGCCAGGCTCATCAGGGTCTCCTGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp ATGAACAGTGCAGTATCCCCCACCCCACCAAGGGATGCTGTGGAATaGCTAAGAGGTGTGAGGACAGCCTTTGTATTGTGGCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: MNSAVSPTPPRDAVE*LRGVRTAFVLWLPC
Trigger: GCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTCCACAGCATCCCTTGGTGGGGTGGGGGATACTGCACTGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CCCAGATCTTGTTCAGACGTCAGCATCACGGCAATCACCAGGCAATaGTGGCAGTTATTGTCCACCCAGGAGTCCCAGACCACCTCCCTT +
Preference number: 1 (lower is better)
Translates to: PRSCSDVSITAITRQ*WQLLSTQESQTTSL
Trigger: AAGGGAGGTGGTCTGGGACTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGACGTCTGAACAAGATCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp AACGGGCTGCTTGAGCTTGGGAGGAAGTGGGAACTGTCAGGGAGGTaGGGAAATTACAAAGCAGGCTCCTCCCACACAGATATCCCTGCT +
Preference number: 1 (lower is better)
Translates to: NGLLELGRKWELSGR*GNYKAGSSHTDIPA
Trigger: AGCAGGGATATCTGTGTGGGAGGAGCCTGCTTTGTAATTTCCCCACCTCCCTGACAGTTCCCACTTCCTCCCAAGCTCAAGCAGCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp AGATCTTGTTCAGACGTCAGCATCACGGCAATCACCAGGCAATGGTaGCAGTTATTGTCCACCCAGGAGTCCCAGACCACCTCCCTTTGC +
Preference number: 1 (lower is better)
Translates to: RSCSDVSITAITRQW*QLLSTQESQTTSLC
Trigger: GCAAAGGGAGGTGGTCTGGGACTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGACGTCTGAACAAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp GTACCCACCAGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATaGCCTAGTCGGCCATCATTGGGAAAAGAGGCCCCTTGGTCTTGC +
Preference number: 1 (lower is better)
Translates to: VPTRARVSSCICSRR*PSRPSLGKEAPWSC
Trigger: GCAAGACCAAGGGGCCTCTTTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCTGGTGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GCCCACTGCCTCTTCAAAGAATTTCAGGGGCTCCTGAAGCACCCCTaGACAGCATTGAACAACACCCTTAAGCTAGGCCCACCTAGACAC +
Preference number: 1 (lower is better)
Translates to: AHCLFKEFQGLLKHP*TALNNTLKLGPPRH
Trigger: GTGTCTAGGTGGGCCTAGCTTAAGGGTGTTGTTCAATGCTGTTCAGGGGTGCTTCAGGAGCCCCTGAAATTCTTTGAAGAGGCAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp GAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAATaGACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCA +
Preference number: 1 (lower is better)
Translates to: EILPTSEHPLDSVPE*TLSSTPLYPYQAGP
Trigger: TGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp GAATGCCTAAGAGGTGTGAGGACAGCCTTTGTATTGTGGCTGCCCTaGTGTGTTGATTCTTCCATTTGTCCCTGGGACTGGGTAGTGGTG +
Preference number: 1 (lower is better)
Translates to: ECLRGVRTAFVLWLP*CVDSSICPWDWVVV
Trigger: CACCACTACCCAGTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CACTGCAAGAATGAACAGTGCAGTATCCCCCACCCCACCAAGGGATaGTGTGGAATGCCTAAGAGGTGTGAGGACAGCCTTTGTATTGTG +
Preference number: 1 (lower is better)
Translates to: HCKNEQCSIPHPTKG*CGMPKRCEDSLCIV
Trigger: CACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTCCACAGCATCCCTTGGTGGGGTGGGGGATACTGCACTGTTCATTCTTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CTGGGCATGACACTGACCCACTGTACACATGAGCTCACAGTGGCTTaGCTGAATTCACGAAGACTGCTTAAGCTCAAGCCAGTTGGCCTT +
Preference number: 1 (lower is better)
Translates to: LGMTLTHCTHELTVA*LNSRRLLKLKPVGL
Trigger: AAGGCCAACTGGCTTGAGCTTAAGCAGTCTTCGTGAATTCAGCCAAGCCACTGTGAGCTCATGTGTACAGTGGGTCAGTGTCATGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp GATGCTGTGGAATGCCTAAGAGGTGTGAGGACAGCCTTTGTATTGTaGCTGCCCTGCTGTGTTGATTCTTCCATTTGTCCCTGGGACTGG +
Preference number: 1 (lower is better)
Translates to: DAVECLRGVRTAFVL*LPCCVDSSICPWDW
Trigger: CCAGTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTCCACAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp TCACTTTCAGCATCACTAAGATGTCCCTTGGAGCATGGAGCCCCATaGGCAGTAGTTAGTAGACAGGTGGATATCATGCCCACACCTGCC +
Preference number: 1 (lower is better)
Translates to: SLSASLRCPLEHGAP*AVVSRQVDIMPTPA
Trigger: GGCAGGTGTGGGCATGATATCCACCTGTCTACTAACTACTGCTCATGGGGCTCCATGCTCCAAGGGACATCTTAGTGATGCTGAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp TTAGAGGGCTCAGACACAACTGCTCTGAGCATTCTCAAGCGCCTCTaGAATGATAATGAGACAGTGAGTAGGCATGGGCCGAGTGTGCTC +
Preference number: 1 (lower is better)
Translates to: LEGSDTTALSILKRL*NDNETVSRHGPSVL
Trigger: GAGCACACTCGGCCCATGCCTACTCACTGTCTCATTATCATTTCAGAGGCGCTTGAGAATGCTCAGAGCAGTTGTGTCTGAGCCCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp ACACAGCTTAAGCTCCAGCTGGGTCCCCTCTATGTGCTGGATCACTaGTGTTTCACAATTCCATTCCTTAGGTCCTATGGCTCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: TQLKLQLGPLYVLDH*CFTIPFLRSYGSSL
Trigger: GAGGGAGGAGCCATAGGACCTAAGGAATGGAATTGTGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTTAAGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp AAGTGCCTTAGCAAAGACTGTGATCCATTCAACAGCAAGGTTAACTaGCCCAGGTGGCAGGGAGAGCAAAACCAGGTACCTTTGGGGATG +
Preference number: 1 (lower is better)
Translates to: KCLSKDCDPFNSKVN*PRWQGEQNQVPLGM
Trigger: CATCCCCAAAGGTACCTGGTTTTGCTCTCCCTGCCACCTGGGGCAGTTAACCTTGCTGTTGAATGGATCACAGTCTTTGCTAAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GCCTTAGATTCAAATCTCTTGAGTCCTATTTCATCAGCTTACAGCTaGCGGCAGGTGTGTCACAGGGAAGGCAATGTTGCCACGTCGGGA +
Preference number: 1 (lower is better)
Translates to: ALDSNLLSPISSAYS*RQVCHREGNVATSG
Trigger: TCCCGACGTGGCAACATTGCCTTCCCTGTGACACACCTGCCGTCAGCTGTAAGCTGATGAAATAGGACTCAAGAGATTTGAATCTAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp TTCAAATCGACAAGCAGACATTTGTCTGCCTTTAACTACGGGGGCTaGCTGGCAGGGAAAATCAACATTCTTTGGGTTGGTCCCTGGTGG +
Preference number: 1 (lower is better)
Translates to: FKSTSRHLSAFNYGG*LAGKINILWVGPWW
Trigger: CCACCAGGGACCAACCCAAAGAATGTTGATTTTCCCTGCCAGGCAGCCCCCGTAGTTAAAGGCAGACAAATGTCTGCTTGTCGATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CAGGCTGAGAGACACAGCTTAAGCTCCAGCTGGGTCCCCTCTATGTaGTGGATCACTGATGTTTCACAATTCCATTCCTTAGGTCCTATG +
Preference number: 1 (lower is better)
Translates to: QAERHSLSSSWVPSM*WITDVSQFHSLGPM
Trigger: CATAGGACCTAAGGAATGGAATTGTGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTTAAGCTGTGTCTCTCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CTACAGGAAGTGATGCTTTTTCTAATGGGTACTGGGCAAGGTAAATaGACCGTGCTTCTTTGGGGAGGGAGGGAGCATGAGTATAGCCGA +
Preference number: 1 (lower is better)
Translates to: LQEVMLFLMGTGQGK*TVLLWGGREHEYSR
Trigger: TCGGCTATACTCATGCTCCCTCCCTCCCCAAAGAAGCACGGTGCATTTACCTTGCCCAGTACCCATTAGAAAAAGCATCACTTCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp GTGTGTGTGAGACCTGAACTGAACGCTCTGAGTGGATTTGAGATCTaGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCTTCACAAAA +
Preference number: 1 (lower is better)
Translates to: VCVRPELNALSGFEI*KSSPLQAPLSSFTK
Trigger: TTTTGTGAAGCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAGAGCGTTCAGTTCAGGTCTCACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp AAACACAAGGTGAGAGGTTTATTGCACAGTGATGGGGGCCTGAGCTaGGTCCGGAAAGAAAAGATCAGAAATGAGCCAAGGAGGCTACTG +
Preference number: 1 (lower is better)
Translates to: KHKVRGLLHSDGGLS*VRKEKIRNEPRRLL
Trigger: CAGTAGCCTCCTTGGCTCATTTCTGATCTTTTCTTTCCGGACTCAGCTCAGGCCCCCATCACTGTGCAATAAACCTCTCACCTTGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp TCATCAGTGGCACAGAGCACTTTTGTGGTGACCTTGGATAGCTGCTaGTTTCTCAGGACAAAGTTGCAGAATGTGGGTAATGAGCCACCA +
Preference number: 1 (lower is better)
Translates to: SSVAQSTFVVTLDSC*FLRTKLQNVGNEPP
Trigger: TGGTGGCTCATTACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGCCACTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CTCTCATCAGTGGCACAGAGCACTTTTGTGGTGACCTTGGATAGCTaGTGCTTTCTCAGGACAAAGTTGCAGAATGTGGGTAATGAGCCA +
Preference number: 1 (lower is better)
Translates to: LSSVAQSTFVVTLDS*CFLRTKLQNVGNEP
Trigger: TGGCTCATTACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGCCACTGATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp CAGTGTACATCCTTCCGGATATGTGGTATCGTGGGTGGCAGATCCTaGTTCTTGGCTAAGGAAGGGACAAGGAGATCTCAATTCAACTCA +
Preference number: 1 (lower is better)
Translates to: QCTSFRICGIVGGRS*FLAKEGTRRSQFNS
Trigger: TGAGTTGAATTGAGATCTCCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCGGAAGGATGTACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp ATAGAATCCCAAGTCCTGCCAGCTTGCCTGAATTGGCCTTTGAAGTaGAGGACTCTGGAGCTTATATTGAACACCTCCCTTGGTGACAGT +
Preference number: 1 (lower is better)
Translates to: IESQVLPACLNWPLK*RTLELILNTSLGDS
Trigger: ACTGTCACCAAGGGAGGTGTTCAATATAAGCTCCAGAGTCCTCCACTTCAAAGGCCAATTCAGGCAAGCTGGCAGGACTTGGGATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp ACACAGGATGTGGGAAAATCAAGACTGATCAGGAAGCTTCCTCTATaGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGC +
Preference number: 1 (lower is better)
Translates to: TQDVGKSRLIRKLPL*LANSHRTGMCYAGC
Trigger: GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAGCTTCCTGATCAGTCTTGATTTTCCCACATCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CTGCCTAGGTTTGGTTTCTTGGAAGTGAACTGTAGCTGTATATGGTaGTTCATGCCTATAATACTAGCACCCAGGAGGCTGAGGCATGGG +
Preference number: 1 (lower is better)
Translates to: LPRFGFLEVNCSCIW*FMPIILAPRRLRHG
Trigger: CCCATGCCTCAGCCTCCTGGGTGCTAGTATTATAGGCATGAACCACCATATACAGCTACAGTTCACTTCCAAGAAACCAAACCTAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GTACTAACTGCACTCTCTCATCAGTGGCACAGAGCACTTTTGTGGTaGCCTTGGATAGCTGCTGCTTTCTCAGGACAAAGTTGCAGAATG +
Preference number: 1 (lower is better)
Translates to: VLTALSHQWHRALLW*PWIAAAFSGQSCRM
Trigger: CATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGCCACTGATGAGAGAGTGCAGTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp ACAGACCAGCCACCATCTTCCTACTTTCCTGGGCTCCTTTACCTATaGCATGCAAATCAGAAGGTGACTTCCTGCTCAGATTTCATGGAA +
Preference number: 1 (lower is better)
Translates to: TDQPPSSYFPGLLYL*HANQKVTSCSDFME
Trigger: TTCCATGAAATCTGAGCAGGAAGTCACCTTCTGATTTGCATGCCATAGGTAAAGGAGCCCAGGAAAGTAGGAAGATGGTGGCTGGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CCTCCAGTGATGGATGGCATGACTCTGCTCACCCTCCGTGGCAGATaGCAAAAACAAAAGCAATATAGGAAGATGCAGGAGTATGAAGTA +
Preference number: 1 (lower is better)
Translates to: PPVMDGMTLLTLRGR*QKQKQYRKMQEYEV
Trigger: TACTTCATACTCCTGCATCTTCCTATATTGCTTTTGTTTTTGCCATCTGCCACGGAGGGTGAGCAGAGTCATGCCATCCATCACTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp TCTGGGTCCCCATTCATCCTTTGCCCAACTTTAGCAGTAGTTGTGTaGAAGGAGGAGTTATTTTGTCTGTGCTGTCTTAGCCTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: SGSPFILCPTLAVVV*KEELFCLCCLSLLL
Trigger: AAGCAGGAGGCTAAGACAGCACAGACAAAATAACTCCTCCTTTCACACAACTACTGCTAAAGTTGGGCAAAGGATGAATGGGGACCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GCTGAGTCCGGAAAGAAAAGATCAGAAATGAGCCAAGGAGGCTACTaGGCCATGCTTGGTAAATACAGACAAATGTCTACAGGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: AESGKKRSEMSQGGY*AMLGKYRQMSTGGE
Trigger: CTCACCTCCTGTAGACATTTGTCTGTATTTACCAAGCATGGCTCAGTAGCCTCCTTGGCTCATTTCTGATCTTTTCTTTCCGGACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp TATTTTCTGATTGGATTTAAGGCCTACTACACAGGAGGAAATACATaGCTGGGTCTGTACATCCACCCAAGAATCCATGGCTGGGGAGCT +
Preference number: 1 (lower is better)
Translates to: YFLIGFKAYYTGGNT*LGLYIHPRIHGWGA
Trigger: AGCTCCCCAGCCATGGATTCTTGGGTGGATGTACAGACCCAGGCATGTATTTCCTCCTGTGTAGTAGGCCTTAAATCCAATCAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp AAATGTGAAGTGTGTATTTACATGACACACTGCAAGAATGAACAGTaGAGTATCCCCCACCCCACCAAGGGATGCTGTGGAATGCCTAAG +
Preference number: 1 (lower is better)
Translates to: KCEVCIYMTHCKNEQ*SIPHPTKGCCGMPK
Trigger: CTTAGGCATTCCACAGCATCCCTTGGTGGGGTGGGGGATACTGCACTGTTCATTCTTGCAGTGTGTCATGTAAATACACACTTCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp CATAGTGAAAATTACAGTGTACATCCTTCCGGATATGTGGTATCGTaGGTGGCAGATCCTGCTTCTTGGCTAAGGAAGGGACAAGGAGAT +
Preference number: 1 (lower is better)
Translates to: HSENYSVHPSGYVVS*VADPASWLRKGQGD
Trigger: ATCTCCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCGGAAGGATGTACACTGTAATTTTCACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp AGTCTGCCTAGGTTTGGTTTCTTGGAAGTGAACTGTAGCTGTATATaGTGGTTCATGCCTATAATACTAGCACCCAGGAGGCTGAGGCAT +
Preference number: 1 (lower is better)
Translates to: SLPRFGFLEVNCSCI*WFMPIILAPRRLRH
Trigger: ATGCCTCAGCCTCCTGGGTGCTAGTATTATAGGCATGAACCACCATATACAGCTACAGTTCACTTCCAAGAAACCAAACCTAGGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp TTTGTATTGTGGCTGCCCTGCTGTGTTGATTCTTCCATTTGTCCCTaGGACTGGGTAGTGGTGTCTCACCTTGTAACTCATCACATTTAC +
Preference number: 1 (lower is better)
Translates to: FVLWLPCCVDSSICP*DWVVVSHLVTHHIY
Trigger: GTAAATGTGATGAGTTACAAGGTGAGACACCACTACCCAGTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GTCGAACTACAGAGAGTAAGAGACTTTAGAGTACACAGCCCTAACTaGGACATCGATATTACGCCTTCTTCACCAAGACTCAGCAGCCAT +
Preference number: 1 (lower is better)
Translates to: VELQRVRDFRVHSPN*DIDITPSSPRLSSH
Trigger: ATGGCTGCTGAGTCTTGGTGAAGAAGGCGTAATATCGATGTCTCAGTTAGGGCTGTGTACTCTAAAGTCTCTTACTCTCTGTAGTTCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp AGGGCACTGACTCCACAAGTGTTTCTGTTCATTTTCCTAAGAATCTaGTATCGAGGAACTGAAGCACTGCAGAAACCAACCAAGTGTCGT +
Preference number: 1 (lower is better)
Translates to: RALTPQVFLFIFLRI*YRGTEALQKPTKCR
Trigger: ACGACACTTGGTTGGTTTCTGCAGTGCTTCAGTTCCTCGATAGCAGATTCTTAGGAAAATGAACAGAAACACTTGTGGAGTCAGTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp AAAACCACTAATCAGATAGTGTCTCTGCAGGTGAGCTATCACTGCTaGGAACAAAGGCGGCTGTTATGCACTGTCCTTCAGTATTCACTA +
Preference number: 1 (lower is better)
Translates to: KTTNQIVSLQVSYHC*EQRRLLCTVLQYSL
Trigger: TAGTGAATACTGAAGGACAGTGCATAACAGCCGCCTTTGTTCCCAGCAGTGATAGCTCACCTGCAGAGACACTATCTGATTAGTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp TTGTGGCTGCCCTGCTGTGTTGATTCTTCCATTTGTCCCTGGGACTaGGTAGTGGTGTCTCACCTTGTAACTCATCACATTTACAAAATA +
Preference number: 1 (lower is better)
Translates to: LWLPCCVDSSICPWD*VVVSHLVTHHIYKI
Trigger: TATTTTGTAAATGTGATGAGTTACAAGGTGAGACACCACTACCCAGTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GAAGATACTATACACATCAGACACAGGATGTGGGAAAATCAAGACTaGTCAGGAAGCTTCCTCTATGGCTGGCTAACTCTCATAGGACTG +
Preference number: 1 (lower is better)
Translates to: EDTIHIRHRMWENQD*SGSFLYGWLTLIGL
Trigger: CAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAGCTTCCTGATCAGTCTTGATTTTCCCACATCCTGTGTCTGATGTGTATAGTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 90 bp ATCAGCTTACAGCTGACGGCAGGTGTGTCACAGGGAAGGCAATGTTaGCACGTCGGGAGAGCTAGTAGTGATATTTTATTTAAGAATAAT +
Preference number: 1 (lower is better)
Translates to: ISLQLTAGVSQGRQC*HVGRASSDILFKNN
Trigger: ATTATTCTTAAATAAAATATCACTACTAGCTCTCCCGACGTGGCAACATTGCCTTCCCTGTGACACACCTGCCGTCAGCTGTAAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp CCTACTTTCCTGGGCTCCTTTACCTATGGCATGCAAATCAGAAGGTaGCTTCCTGCTCAGATTTCATGGAATCTAACATTATCTAAGACC +
Preference number: 1 (lower is better)
Translates to: PTFLGSFTYGMQIRR*LPAQISWNLTLSKT
Trigger: GGTCTTAGATAATGTTAGATTCCATGAAATCTGAGCAGGAAGTCACCTTCTGATTTGCATGCCATAGGTAAAGGAGCCCAGGAAAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GAATGCCTCTGTTCTCCAGGAGGGACTGTGTTTACACGTTTCTTGTaGAACAGGATTGCTGAGGTTTGGAATCATTTCAGTTTGCAAAGA +
Preference number: 1 (lower is better)
Translates to: ECLCSPGGTVFTRFL*NRIAEVWNHFSLQR
Trigger: TCTTTGCAAACTGAAATGATTCCAAACCTCAGCAATCCTGTTTCACAAGAAACGTGTAAACACAGTCCCTCCTGGAGAACAGAGGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 90 bp TTTCACGCTAGGGGAGTAAATATAATGGTGACTATGCAGACTTATTaGGCATGTGTGAGGGCAAAAGGGAAATACCATGTCTCAGTGTTC +
Preference number: 1 (lower is better)
Translates to: FHARGVNIMVTMQTY*ACVRAKGKYHVSVF
Trigger: GAACACTGAGACATGGTATTTCCCTTTTGCCCTCACACATGCCCAATAAGTCTGCATAGTCACCATTATATTTACTCCCCTAGCGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp GATTTGATTCACATTTGGCCTTTAAATGTGAAGTGTGTATTTACATaGCACACTGCAAGAATGAACAGTGCAGTATCCCCCACCCCACCA +
Preference number: 1 (lower is better)
Translates to: DLIHIWPLNVKCVFT*HTARMNSAVSPTPP
Trigger: TGGTGGGGTGGGGGATACTGCACTGTTCATTCTTGCAGTGTGTCATGTAAATACACACTTCACATTTAAAGGCCAAATGTGAATCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 90 bp ACAAGTGTTTCTGTTCATTTTCCTAAGAATCTGCTATCGAGGAACTaGAGCACTGCAGAAACCAACCAAGTGTCGTCAGAAATAACTTTT +
Preference number: 1 (lower is better)
Translates to: TSVSVHFPKNLLSRN*STAETNQVSSEITF
Trigger: AAAAGTTATTTCTGACGACACTTGGTTGGTTTCTGCAGTGCTTCAGTTCCTCGATAGCAGATTCTTAGGAAAATGAACAGAAACACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTGCGCTGGTAGGTAGATaGCAACCAGCTCTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSALVGR*QPALGG
Trigger: TCCCCCGAGAGCTGGTTGTCATCTACCTACCAGCGC...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp ATGGTGGCAGTTATTGTCCACCCAGGAGTCCCAGACCACCTCCCTTaGCTCTGGCCACCTCGTTCTGAACTCCCCATCAGGAGAGTGGTC +
Preference number: 2 (lower is better)
Translates to: MVAVIVHPGVPDHLP*LWPPRSELPIRRVV
Trigger: GACCACTCTCCTGATGGGGAGTTCAGAACGAGGTGGCCAGAGCAAAGGGAGGTGGTCTGGGACTCCTGGGTGGACAATAACTGCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTGAGTGGATTTGAGATCTGGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCCCTTTGCCTGTCTACTaGCCCCACCCTCTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LSGFEIWKSSPLQAPLSSPLPVY*PHPLGP
Trigger: GGGACCCAGAGGGTGGGGTCAGTAGACAGGCAAAGG...GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTCAGACCACCTCCCTTTaGTCTGGCCACCTCGTTCTG +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSQTTSL*SGHLVL
Trigger: CAGAACGAGGTGGCCAGAGCAAAGGGAGGTGGTCTG...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACTATCATGCCCACACCTaGCACCAGCACTCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANYHAHT*HQHSVS
Trigger: AGACACAGAGTGCTGGTGGCAGGTGTGGGCATGATA...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACGCCCAATGCCTCTCATaGGCAAGTGCAGTGAATGTG +
Preference number: 2 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANAQCLS*ASAVNV
Trigger: CACATTCACTGCACTTGCGCATGAGAGGCATTGGGC...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGGAGCTTGGGAGGAAGTaGGAACTGTCAGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMELGRK*ELSGRW
Trigger: CCACCTCCCTGACAGTTCCCACTTCCTCCCAAGCTC...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGAATGTCTACAGGAGGTaGGCTAGCCATGCAACACCC +
Preference number: 2 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLNVYRR*ASHATP
Trigger: GGGTGTTGCATGGCTAGCTCACCTCCTGTAGACATT...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTCATTGCCAGTGGAGCTaGTCTCTCCTCACCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSHCQWS*SLLTSL
Trigger: AAGGGAGGTGAGGAGAGAGCAGCTCCACTGGCAATG...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGTGGAGGGAGATGCTGTaGCCTTCCACCCTCTCCCTA +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLWREML*PSTLSL
Trigger: TAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCA...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGCAGGCTGGAGGGAGATaGTGTGCCCTTCCACCCTCT +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGQAGGR*CALPPS
Trigger: AGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTG...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACAGATCTGGAGCCAGATaGCCACAGACAACCTCACTT +
Preference number: 2 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANRSGAR*PQTTSL
Trigger: AAGTGAGGTTGTCTGTGGCCATCTGGCTCCAGATCT...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTGAGTGGATTTGAGATCTGGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCCTGGCCACCTCGTTCTaGACTCCCCATCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: LSGFEIWKSSPLQAPLSSLATSF*TPHQES
Trigger: ACTCTCCTGATGGGGAGTTCAGAACGAGGTGGCCAG...GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGAAGTCCTCTCCTCTaGAGGCACCACTCTCAAGCT +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLGSPLL*RHHSQA
Trigger: AGCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCC...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGGCACTCTCTCATCAGTaGCACAGAGCACTTTTGTGG +
Preference number: 2 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLALSHQ*HRALLW
Trigger: CCACAAAAGTGCTCTGTGCCACTGATGAGAGAGTGC...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGCCTGGCAGTCCCCTCTaGTGCCCAGGTTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLPGSPL*CPGSFS
Trigger: AGAAAAAGAACCTGGGCACCAGAGGGGACTGCCAGG...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGAGTGGATTTGAGATCTGGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCAGTGCCCATTGCCAGTaGAGCTGCTCTCTCCTCACC +
Preference number: 2 (lower is better)
Translates to: LSGFEIWKSSPLQAPLSSSAHCQ*SCSLLT
Trigger: GGTGAGGAGAGAGCAGCTCCACTGGCAATGGGCACT...GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTACCAGGGCCAAGAAGTaGGAGTGGTTGGGTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSTRAKK*EWLGRK
Trigger: TTTCCTACCCAACCACTCCCACTTCTTGGCCCTGGT...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGCATTCTCCAGACCTCTaGGATAGCACAGTCCTTGAC +
Preference number: 2 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLHSPDL*DSTVLD
Trigger: GTCAAGGACTGTGCTATCCCAGAGGTCTGGAGAATG...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp CACACTCTCAGAAAGAAAGGCCAGGGCGTGGCCTATGGCCATCCTTaGGCGACAAATAGGGACAGTCTGACATCTACCCTGGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HTLRKKGQGVAYGHP*ATNRDSLTSTLEEP
Trigger: TGGCTCTTCCAGGGTAGATGTCAGACTGTCCCTATTTGTCGCCAAAGGATGGCCATAGGCCACGCCCTGGCCTTTCTTTCTGAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGGAGCTCTGCTGCTGTTaGTTTGATTCACATTTGGCC +
Preference number: 2 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLELCCC*FDSHLA
Trigger: GGCCAAATGTGAATCAAATCAACAGCAGCAGAGCTC...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGTTTAACTACGGGGGCTaGCTGGCAGGGAAAATCAAC +
Preference number: 2 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMFNYGG*LAGKIN
Trigger: GTTGATTTTCCCTGCCAGGCAGCCCCCGTAGTTAAA...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACATCTTCCTACTTTCCTaGGCTCCTTTACCTATGGCA +
Preference number: 2 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANIFLLS*APLPMA
Trigger: TGCCATAGGTAAAGGAGCCCAGGAAAGTAGGAAGAT...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp AGGCCTGTAAGCACACAGCAGCTTCTGAAGAGAGGCAAAAATGGCTaGTGTTTCCTGTCACCTCCCTTAGGTCAGGCGAGGGGCAAACAC +
Preference number: 2 (lower is better)
Translates to: RPVSTQQLLKRGKNG*CFLSPPLGQARGKH
Trigger: GTGTTTGCCCCTCGCCTGACCTAAGGGAGGTGACAGGAAACACAAGCCATTTTTGCCTCTCTTCAGAAGCTGCTGTGTGCTTACAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTCTACCTGGGGAGAGCTaGAGACAAAGTCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: LQAVLARLAQSPLPLQRILPGES*RQSPDK
Trigger: CTTGTCTGGACTTTGTCTCCAGCTCTCCCCAGGTAG...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACATAGATGGAACCAAATaGATTCTGAGCCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANIDGTK*ILSQES
Trigger: ACTCTCCTGGCTCAGAATCCATTTGGTTCCATCTAT...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCACTGACCCCACCCTCTaGGTCCCCATTCATCCTTTG +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCTDPTL*VPIHPL
Trigger: CAAAGGATGAATGGGGACCCAGAGGGTGGGGTCAGT...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAACCAGATCTCTCCCCATaGTGTTCATGGGGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: ISREILPTSEHPLDSVPEPDLSP*CSWGEG
Trigger: CCCTTCACCCCATGAACACCATGGGGAGAGATCTGG...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp AGGGATGCTGTGGAATGCCTAAGAGGTGTGAGGACAGCCTTTGTATaGTGGCTGCCCTGCTGTGTTGATTCTTCCATTTGTCCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RDAVECLRGVRTAFV*WLPCCVDSSICPWD
Trigger: GTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTCCACAGCATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCGGGGAGTGGATGTCATaGCTTGCCTTTGCCTGTCTA +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCGEWMS*LAFACL
Trigger: TAGACAGGCAAAGGCAAGTCATGACATCCACTCCCC...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTAGATGGGGGCCTGAGCTaGGTCCGGAAAGAAAAGATC +
Preference number: 2 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLDGGLS*VRKEKI
Trigger: GATCTTTTCTTTCCGGACTCAGCTCAGGCCCCCATC...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCAGGTTTATTGCACAGTaGTGGGGGCCTGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCRFIAQ*WGPELS
Trigger: ACTCAGCTCAGGCCCCCATCACTGTGCAATAAACCT...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGACTCAGCAGCCATCTTaGAGATGCAGTAGAAAGATT +
Preference number: 2 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLTQQPS*RCSRKI
Trigger: AATCTTTCTACTGCATCTTCAAGATGGCTGCTGAGT...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCGTCATGACTTGCCTTTaGCTGTCTACTGACCCCACC +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCVMTCL*LSTDPT
Trigger: GGTGGGGTCAGTAGACAGGCAAAGGCAAGTCATGAC...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGGAACTGTCAGGGAGGTaGGGAAATTACAAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGELSGR*GNYKAG
Trigger: GCCTGCTTTGTAATTTCCCCACCTCCCTGACAGTTC...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTGTCCCCTCTATGTGCTaGATCACTGATGTTTCACAA +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSVPSMC*ITDVSQ
Trigger: TTGTGAAACATCAGTGATCCAGCACATAGAGGGGAC...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGTTGACTTGTGACATGTaGGTCAGGCTGAGAGACACA +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLLTCDM*VRLRDT
Trigger: TGTGTCTCTCAGCCTGACCCACATGTCACAAGTCAA...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCAGAGCACTTTTGTGGTaGCCTTGGATAGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCRALLW*PWIAAA
Trigger: AGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCT...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGGAACCAAATGGATTCTaGGCCAGGAGAGTTTCGTTC +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGEPNGF*ARRVSF
Trigger: GAACGAAACTCTCCTGGCTCAGAATCCATTTGGTTC...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGCTCTGGAGCTTATATTaGACACCTCCCTTGGTGACA +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGLWSLY*TPPLVT
Trigger: TGTCACCAAGGGAGGTGTTCAATATAAGCTCCAGAG...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGGATTGGGAGCTGACCTaGGTGATACATTTTGATGGG +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGDWELT*VIHFDG
Trigger: CCCATCAAAATGTATCACTCAGGTCAGCTCCCAATC...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCTGGCCCAAAGTTTCCTaGAAGCACAGGTTGACAAGG +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCWPKVS*KHRLTR
Trigger: CCTTGTCAACCTGTGCTTTCAGGAAACTTTGGGCCA...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGAAGCCCCACTCTGATTaGGGAGTTATTGGTAGTGAT +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLKPHSD*GVIGSD
Trigger: ATCACTACCAATAACTCCTCAATCAGAGTGGGGCTT...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGAGTGGATTTGAGATCTGGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCGGGCTCCTTTACCTATaGCATGCAAATCAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: LSGFEIWKSSPLQAPLSSGLLYL*HANQKV
Trigger: CACCTTCTGATTTGCATGCCATAGGTAAAGGAGCCC...GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGAGTGGATTTGAGATCTaGAAGTCCTCTCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGSGFEI*KSSPLQ
Trigger: CTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACT...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp ACATCCTTCCGGATATGTGGTATCGTGGGTGGCAGATCCTGCTTCTaGGCTAAGGAAGGGACAAGGAGATCTCAATTCAACTCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: TSFRICGIVGGRSCF*AKEGTRRSQFNSGY
Trigger: GTACCCTGAGTTGAATTGAGATCTCCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCGGAAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp TCTTCACCAAGACTCAGCAGCCATCTTGAAGATGCAGTAGAAAGATaGTCAGAGCCAGAAGCTGGGAGGATTGCAGCACAGTCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SSPRLSSHLEDAVER*SEPEAGRIAAQSGH
Trigger: ATGCCCAGACTGTGCTGCAATCCTCCCAGCTTCTGGCTCTGACAATCTTTCTACTGCATCTTCAAGATGGCTGCTGAGTCTTGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGATGCAAATCAGAAGGTaGCTTCCTGCTCAGATTTCA +
Preference number: 2 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLMQIRR*LPAQIS
Trigger: TGAAATCTGAGCAGGAAGTCACCTTCTGATTTGCAT...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAACAAGGGGAAAAGAGATaGCATAGTAGATCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ISREILPTSEHPLDSVPEQGEKR*HSRSGA
Trigger: GGCTCCAGATCTACTATGGCATCTCTTTTCCCCTTG...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCCAACTATCCCCATTCTaGTCTCCATGGAAACTCTGG +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCQLSPF*SPWKLW
Trigger: CCAGAGTTTCCATGGAGACCAGAATGGGGATAGTTG...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTGGACATCTGGGATTGTaGACATATAATCCAGACATT +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSGHLGL*TYNPDI
Trigger: AATGTCTGGATTATATGTCCACAATCCCAGATGTCC...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCCCCAGGCTGGACATCTaGGATTGTGGACATATAATC +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCPRLDI*DCGHII
Trigger: GATTATATGTCCACAATCCCAGATGTCCAGCCTGGG...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp TCTGTGTCTTTGACACTAACTGGCCTACCGTCCTCTGAGAGGCCTTaGGTGAGTCTAAGCTCTCAATACACACTCTCAGAAAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: SVSLTLTGLPSSERP*VSLSSQYTLSERKA
Trigger: GGCCTTTCTTTCTGAGAGTGTGTATTGAGAGCTTAGACTCACCAAAGGCCTCTCAGAGGACGGTAGGCCAGTTAGTGTCAAAGACACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp AACTGCACTCTCTCATCAGTGGCACAGAGCACTTTTGTGGTGACCTaGGATAGCTGCTGCTTTCTCAGGACAAAGTTGCAGAATGTGGGT +
Preference number: 2 (lower is better)
Translates to: NCTLSSVAQSTFVVT*DSCCFLRTKLQNVG
Trigger: ACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGCCACTGATGAGAGAGTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp GTCTCTAGCTGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCATaGGGAAAAGAGGCCCCTTGGTCTTGCAAACTTTATATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: VSSCICSRRWPSRPS*GKEAPWSCKLYMSQ
Trigger: CTGGGACATATAAAGTTTGCAAGACCAAGGGGCCTCTTTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp TTTGTGATGGCCTCTGATGTGCTTTCTGCTGTAAACCTGTTCTCATaGGGTATTAGTGAGTGTGGCCTAAGCCTGAGTCTGCCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: FVMASDVLSAVNLFS*GISECGLSLSLPVS
Trigger: GGAGACAGGCAGACTCAGGCTTAGGCCACACTCACTAATACCCAATGAGAACAGGTTTACAGCAGAAAGCACATCAGAGGCCATCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTTTAGCAGTAGTTGTGTaGAAGGAGGAGTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSLAVVV*KEELFC
Trigger: ACAAAATAACTCCTCCTTTCACACAACTACTGCTAA...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ACTAGCACCCAGGAGGCTGAGGCATGGGGATTGCTTATCACTACCAGATCTACTATTAGATTACCAGAATaGGGTAGAGTGCTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: TSTQEAEAWGLLITTRSTIRLPE*GRVLRW
Trigger: CCACCTGAGCACTCTACCTCATTCTGGTAATCTAAT...AGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTCAGGGTACAATATGTTaGCTATACAGAGCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIQGTIC*LYRASR
Trigger: TCTGCTTGCTCTGTATAGGCAACATATTGTACCCTG...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGAGTTTGCTTTTAATTTaGGCTCTTGGGGTTGGACTC +
Preference number: 2 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGSLLLI*ALGVGL
Trigger: GAGTCCAACCCCAAGAGCCCAAATTAAAAGCAAACT...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCGAAGAGAGGCAAAAATaGCTTGTGTTTCCTGTCACC +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCEERQK*LVFPVT
Trigger: GGTGACAGGAAACACAAGCCATTTTTGCCTCTCTTC...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp AAGTTGACTGCCCAAAGTGTTCATCTTTTGTTCTTTACTCTGTGCTaGGGGAAGGAGCTAAGGAGGCCTGTAAGCACACAGCAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: KLTAQSVHLLFFTLC*GKELRRPVSTQQLL
Trigger: CAGAAGCTGCTGTGTGCTTACAGGCCTCCTTAGCTCCTTCCCCAAGCACAGAGTAAAGAACAAAAGATGAACACTTTGGGCAGTCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp GTTCATGCCTATAATACTAGCACCCAGGAGGCTGAGGCATGGGGATaGCTTATCACTACCAGATCTACTGCAAGTTTGAGACCAATGTGG +
Preference number: 2 (lower is better)
Translates to: VHAYNTSTQEAEAWG*LITTRSTASLRPMW
Trigger: CCACATTGGTCTCAAACTTGCAGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGTATTATAGGCATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp CTGAGTGGATTTGAGATCTGGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGCAAGAGGGACAAAAGGTaGGTCCAATTTATCATTCCT +
Preference number: 2 (lower is better)
Translates to: LSGFEIWKSSPLQAPLSSKRDKR*VQFIIP
Trigger: AGGAATGATAAATTGGACTCACCTTTTGTCCCTCTT...GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTAAAACACAGAAGTGGATaGTCACAGTCAGCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLKHRSG*SQSASG
Trigger: TCCACTAGCTGACTGTGAGCATCCACTTCTGTGTTT...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTAAAATCAACATTCTTTaGGTTGGTCCCTGGTGGATA +
Preference number: 2 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIKINIL*VGPWWI
Trigger: TATCCACCAGGGACCAACCCAAAGAATGTTGATTTT...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCAATTGGCCTTTGAAGTaGAGGACTCTGGAGCTTATA +
Preference number: 2 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCNWPLK*RTLELI
Trigger: TATAAGCTCCAGAGTCCTCCACTTCAAAGGCCAATT...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp ACTCACATACGCAGGCATGTGGAGGCCAGAGGTCAACCTCACGTGTaGTTTCTAAGCTGGCATCTACTTTGTTCTTTTCTTTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: THIRRHVEARGQPHV*FLSWHLLCSFLFSG
Trigger: TCCTGAGAAAAGAAAAGAACAAAGTAGATGCCAGCTTAGAAACAACACGTGAGGTTGACCTCTGGCCTCCACATGCCTGCGTATGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTATTCTCAGGACAAAGTTaGAGAATGTGGGTAATGAGC +
Preference number: 2 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLFSGQS*RMWVMS
Trigger: GCTCATTACCCACATTCTGCAACTTTGTCCTGAGAA...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp ATCCAGACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTGACTCAGCCAGAACACCTCCCTTGGTaGCAGTTGAGGATGAGGAAG +
Preference number: 2 (lower is better)
Translates to: IQTFKTIFLQLEDHLTQPEHLPW*QLRMRK
Trigger: CTTCCTCATCCTCAACTGTCACCAAGGGAGGTGTTC...TGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGTCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR TCA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTAATCTTCTCTATAAAGTaGAGAAGCCTAGTAGGATCG +
Preference number: 2 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLIFSIK*RSLVGS
Trigger: CGATCCTACTAGGCTTCTTCACTTTATAGAGAAGAT...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTGTGTTGTTTCTAAGCTaGCATCTACTTTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIVLFLS*HLLCSF
Trigger: AAAAGAACAAAGTAGATGCCAGCTTAGAAACAACAC...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp TGTACAGCTCTTGCAAGAGAGAGAATCAGTTTGTTTTTAAACACGTaGCCAGATAGGTTGACCATGCTCCAATGGCCCCACTCCTGTATA +
Preference number: 2 (lower is better)
Translates to: CTALARERISLFLNT*PDRLTMLQWPHSCI
Trigger: TATACAGGAGTGGGGCCATTGGAGCATGGTCAACCTATCTGGCAACGTGTTTAAAAACAAACTGATTCTCTCTCTTGCAAGAGCTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp TTCCCTACCAACTCAGATCCCAGATATGGAGGTAGGACAGACCAGCCACCATCTCCTGCTCAGATTTCATaGAATCTAACATTATCTAAG +
Preference number: 2 (lower is better)
Translates to: FPTNSDPRYGGRTDQPPSPAQIS*NLTLSK
Trigger: CTTAGATAATGTTAGATTCCATGAAATCTGAGCAGG...AGATGGTGGCTGGTCTGTCCTACCTCCATATCTGGGATCTGAGTTGGTAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp TCATTAGAAGAGGTACCCTGGGCAAGTCTGCCTAGGTTTGGTTTCTaGGAAGTGAACTGTAGCTGTATATGGTGGTTCATGCCTATAATA +
Preference number: 2 (lower is better)
Translates to: SLEEVPWASLPRFGF*EVNCSCIWWFMPII
Trigger: TATTATAGGCATGAACCACCATATACAGCTACAGTTCACTTCCAAGAAACCAAACCTAGGCAGACTTGCCCAGGGTACCTCTTCTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp GTCTCACCTTGTAACTCATCACATTTACAAAATAAAGACACACTTTaGCCCCCACTCAGAATATCATTAGAAGAGGTACCCTGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: VSPCNSSHLQNKDTL*PPLRISLEEVPWAS
Trigger: ACTTGCCCAGGGTACCTCTTCTAATGATATTCTGAGTGGGGGCAAAAGTGTGTCTTTATTTTGTAAATGTGATGAGTTACAAGGTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR GCA 90 bp ATCCAGACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTGACTCAGCCAGAGTTATTTTGTCTGTaGTGTCTTAGCCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: IQTFKTIFLQLEDHLTQPELFCL*CLSLLL
Trigger: AAGCAGGAGGCTAAGACAGCACAGACAAAATAACTC...TGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGTCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CCA 90 bp ATCCAGACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTGACTCAGCCAATGAGACTAAGACAATaGCTCCCAATGGATTGGCAT +
Preference number: 2 (lower is better)
Translates to: IQTFKTIFLQLEDHLTQPMRLRQ*LPMDWH
Trigger: ATGCCAATCCATTGGGAGCCATTGTCTTAGTCTCAT...TGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGTCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 90 bp CTTATCTTAGTTTTCAATGAGACTAAGACAATGGCTCCCAATGGATaGGCATGTATATTACAGGAACAGCATCTTGTACTAACTGCACTC +
Preference number: 2 (lower is better)
Translates to: LILVFNETKTMAPNG*ACILQEQHLVLTAL
Trigger: GAGTGCAGTTAGTACAAGATGCTGTTCCTGTAATATACATGCCAATCCATTGGGAGCCATTGTCTTAGTCTCATTGAAAACTAAGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GGGGAGGCAATCGCCGCAGCGCTGGCTAGTGCCCATTaGCAGTGGAGCTGCTCTCTCCTCACCTCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: GEAIAAALASAH*QWSCSLLTSLG
Trigger: CCCAAGGGAGGTGAGGAGAGAGCAGCTCCACTGGCAATGGGCACTAGCCAGCGCTGCGGCGATTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GCTGAACCTGTAAGAGCAGGCTGGAGGGAGATGCTGTaGCCTTCCACCCTCTCCCTACCGCAAACCCCGCCC +
Preference number: 3 (lower is better)
Translates to: AEPVRAGWREML*PSTLSLPQTPP
Trigger: GGGCGGGGTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTTACAGGTTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GCCAAGAAGTGGGAGTGGTTGGGTAGGAAAGTGGGGTaGGGAGGAGGGAGGGAGGGGGACTTTCGGGATAGC +
Preference number: 3 (lower is better)
Translates to: AKKWEWLGRKVG*GGGREGDFRDS
Trigger: GCTATCCCGAAAGTCCCCCTCCCTCCCTCCTCCCCACCCCACTTTCCTACCCAACCACTCCCACTTCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GCCGCAGCGCTGGCTAGTGCCCATTGCCAGTGGAGCTaGTCTCTCCTCACCTCCCTTGGGTTTTCAAGCTTG +
Preference number: 3 (lower is better)
Translates to: AAALASAHCQWS*SLLTSLGFSSL
Trigger: CAAGCTTGAAAACCCAAGGGAGGTGAGGAGAGAGCAGCTCCACTGGCAATGGGCACTAGCCAGCGCTGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GTCCACCCAGGAGTCCCAGACCACCTCCCTTTGCTCTaGCCACCTCGTTCTGAACTCCCCATCAGGAGAGTG +
Preference number: 3 (lower is better)
Translates to: VHPGVPDHLPLL*PPRSELPIRRV
Trigger: CACTCTCCTGATGGGGAGTTCAGAACGAGGTGGCCAGAGCAAAGGGAGGTGGTCTGGGACTCCTGGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGCCAGACCACCTCCCTTaGCTCTGGCCACCTCGTTCT +
Preference number: 3 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLPDHLP*LWPPRS
Trigger: AGAACGAGGTGGCCAGAGCAAAGGGAGGTGGTCTGG...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGGTTGGGAGGGAGAGCTaGTGTCAGGAGAGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLVGRES*CQEREG
Trigger: TCCCTCCCTCTCCTGACACAAGCTCTCCCTCCCAAC...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CTTACCAGGTCCCCCAGAAGGCTACCTGGGGAGAGCTaGAGACAAAGTCCAGACAAGTGTCCTGGCAGTCCC +
Preference number: 3 (lower is better)
Translates to: LTRSPRRLPGES*RQSPDKCPGSP
Trigger: GGGACTGCCAGGACACTTGTCTGGACTTTGTCTCCAGCTCTCCCCAGGTAGCCTTCTGGGGGACCTGGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACGCCAGCTTGCCTGAATaGGCCTTTGAAGTGGAGGAC +
Preference number: 3 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANASLPE*AFEVED
Trigger: GTCCTCCACTTCAAAGGCCAATTCAGGCAAGCTGGC...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGAGCAGGCCCCAGATCTaGTTCAGACGTCAGCATCAC +
Preference number: 3 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLSRPQI*FRRQHH
Trigger: GTGATGCTGACGTCTGAACAAGATCTGGGGCCTGCT...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGTGACAACGGGCTGCTaGAGCTTGGGAGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLVTTGC*SLGGSG
Trigger: CCCACTTCCTCCCAAGCTCAAGCAGCCCGTTGTCAC...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GAGACCCTGATGAGCCTGGCGGGGTACCGGATCCCATaGATGCCTCTGTTCTCCAGGAGGGACTGTGTTTAC +
Preference number: 3 (lower is better)
Translates to: ETLMSLAGYRIP*MPLFSRRDCVY
Trigger: GTAAACACAGTCCCTCCTGGAGAACAGAGGCATTCATGGGATCCGGTACCCCGCCAGGCTCATCAGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TGCCTGGGTCTGTACATCCACCCAAGAATCCATGGCTaGGGAGCTCGCAGGCTCCAGAGGCGAATGTGTTCT +
Preference number: 3 (lower is better)
Translates to: CLGLYIHPRIHG*GARRLQRRMCS
Trigger: AGAACACATTCGCCTCTGGAGCCTGCGAGCTCCCCAGCCATGGATTCTTGGGTGGATGTACAGACCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GGGAGTGGATGTCATGACTTGCCTTTGCCTGTCTACTaGCCCCACCCTCTGGGTCCCCATTCATCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: GSGCHDLPLPVY*PHPLGPHSSFA
Trigger: GGCAAAGGATGAATGGGGACCCAGAGGGTGGGGTCAGTAGACAGGCAAAGGCAAGTCATGACATCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTaGACTTTCGCCCTAGGTAGTGTGCATTCGTGGGCA +
Preference number: 3 (lower is better)
Translates to: PCVWYPGFSCLG*TFALGSVHSWA
Trigger: TGCCCACGAATGCACACTACCTAGGGCGAAAGTTCAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp TTATTGTCCACCCAGGAGTCCCAGACCACCTCCCTTTaGTCTGGCCACCTCGTTCTGAACTCCCCATCAGGA +
Preference number: 3 (lower is better)
Translates to: LLSTQESQTTSL*SGHLVLNSPSG
Trigger: TCCTGATGGGGAGTTCAGAACGAGGTGGCCAGAGCAAAGGGAGGTGGTCTGGGACTCCTGGGTGGACAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TCAGACGTCAGCATCACGGCAATCACCAGGCAATGGTaGCAGTTATTGTCCACCCAGGAGTCCCAGACCACC +
Preference number: 3 (lower is better)
Translates to: SDVSITAITRQW*QLLSTQESQTT
Trigger: GGTGGTCTGGGACTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGACGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AAGGGTGTACCTTACCAGGTCCCCCAGAAGGCTACCTaGGGAGAGCTGGAGACAAAGTCCAGACAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: KGVPYQVPQKAT*GELETKSRQVS
Trigger: GGACACTTGTCTGGACTTTGTCTCCAGCTCTCCCCAGGTAGCCTTCTGGGGGACCTGGTAAGGTACACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CACACAGATATCCCTGCTGAACCTGTAAGAGCAGGCTaGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTA +
Preference number: 3 (lower is better)
Translates to: HTDIPAEPVRAG*REMLCPSTLSL
Trigger: TAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTTACAGGTTCAGCAGGGATATCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGCAATGGTGGCAGTTATaGTCCACCCAGGAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLQWWQL*STQESQ
Trigger: CTGGGACTCCTGGGTGGACAATAACTGCCACCATTG...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGGGGATAGCACAGTCCTaGACTTGTGACATGTGGGTC +
Preference number: 3 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMGIAQS*TCDMWV
Trigger: GACCCACATGTCACAAGTCAAGGACTGTGCTATCCC...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CCTATGGCCATCCTTTGGCGACAAATAGGGACAGTCTaGCATCTACCCTGGAAGAGCCAAGAAGCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: PMAILWRQIGTV*HLPWKSQEAGP
Trigger: GGGGCCTGCTTCTTGGCTCTTCCAGGGTAGATGTCAGACTGTCCCTATTTGTCGCCAAAGGATGGCCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GGCATTCACCATATCTCGGGAGATACTGCCCACTTCTaGGCACCCTCTGGACAGTGTTCCTGGACGCACACT +
Preference number: 3 (lower is better)
Translates to: GIHHISGDTAHF*APSGQCSWTHT
Trigger: AGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATATGGTGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GCAGTATCCCCCACCCCACCAAGGGATGCTGTGGAATaGCTAAGAGGTGTGAGGACAGCCTTTGTATTGTGG +
Preference number: 3 (lower is better)
Translates to: AVSPTPPRDAVE*LRGVRTAFVLW
Trigger: CCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTCCACAGCATCCCTTGGTGGGGTGGGGGATACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TGTTCAGACGTCAGCATCACGGCAATCACCAGGCAATaGTGGCAGTTATTGTCCACCCAGGAGTCCCAGACC +
Preference number: 3 (lower is better)
Translates to: CSDVSITAITRQ*WQLLSTQESQT
Trigger: GGTCTGGGACTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGACGTCTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CAAAGGTTTGGCAACAGAAGAGCTGAAGGAAGGCAATaGGGACCTGGGTATGTGCAGACTGGGTGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: QRFGNRRAEGRQ*GPGYVQTGCWG
Trigger: CCCCCAACACCCAGTCTGCACATACCCAGGTCCCCATTGCCTTCCTTCAGCTCTTCTGTTGCCAAACCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ATGGGTACTGGGCAAGGTAAATGCACCGTGCTTCTTTaGGGAGGGAGGGAGCATGAGTATAGCCGATGGCGT +
Preference number: 3 (lower is better)
Translates to: MGTGQGKCTVLL*GGREHEYSRWR
Trigger: ACGCCATCGGCTATACTCATGCTCCCTCCCTCCCCAAAGAAGCACGGTGCATTTACCTTGCCCAGTACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CCTAGTAACCTGGAGCCTCCAGGACAGCATGCTAGGTaGCCTTCAACCAACTTCCCTCTCACCTACAGGAAG +
Preference number: 3 (lower is better)
Translates to: PSNLEPPGQHAR*PSTNFPLTYRK
Trigger: CTTCCTGTAGGTGAGAGGGAAGTTGGTTGAAGGCCACCTAGCATGCTGTCCTGGAGGCTCCAGGTTACTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GGGAGAGCTGGAGACAAAGTCCAGACAAGTGTCCTGGCAGTCCCCTCTGGTGCCGAAAATCAACATTCTTaGGGTTGGTCCCTGGTGGAT +
Preference number: 3 (lower is better)
Translates to: GRAGDKVQTSVLAVPSGAENQHS*GWSLVD
Trigger: ATCCACCAGGGACCAACCCAAAGAATGTTGATTTTC...GGCACCAGAGGGGACTGCCAGGACACTTGTCTGGACTTTGTCTCCAGCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTGGCAGATCCTGCTTCTaGGCTAAGGAAGGGACAAGG +
Preference number: 3 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIGRSCF*AKEGTR
Trigger: CCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCC...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CTGGCCTGTAGCTCACCCATTCAGCTAAGTCTTGGCTaGCCTAAGTCCTGTGGAGTCGCCTCTCTCGATTCT +
Preference number: 3 (lower is better)
Translates to: LACSSPIQLSLG*PKSCGVASLDS
Trigger: AGAATCGAGAGAGGCGACTCCACAGGACTTAGGTCAGCCAAGACTTAGCTGAATGGGTGAGCTACAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TTACAAAGCAGGCTCCTCCCACACAGATATCCCTGCTaGACCTGTAAGAGCAGGCTGGAGGGAGATGCTGTG +
Preference number: 3 (lower is better)
Translates to: LQSRLLPHRYPC*TCKSRLEGDAV
Trigger: CACAGCATCTCCCTCCAGCCTGCTCTTACAGGTTCAGCAGGGATATCTGTGTGGGAGGAGCCTGCTTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GGCCACAAATGGCATTCACCATATCTCGGGAGATACTaGCCACTTCTGAGCACCCTCTGGACAGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: GHKWHSPYLGRY*PLLSTLWTVFL
Trigger: CAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATATGGTGAATGCCATTTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TCTCCTCTGCAGGCACCACTCTCAAGCTTCACAAAATaGTCTCACCTGCCCAATGCCTCTCATGCGCAAGTG +
Preference number: 3 (lower is better)
Translates to: SPLQAPLSSFTK*SHLPNASHAQV
Trigger: CACTTGCGCATGAGAGGCATTGGGCAGGTGAGACCATTTTGTGAAGCTTGAGAGTGGTGCCTGCAGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CGTCTCCATTCAAAGCCTCAGACCTCGGGAAGGCAATaGAAGAAACCCCATAGCCTCCAGATCTCTCCCCAT +
Preference number: 3 (lower is better)
Translates to: RLHSKPQTSGRQ*KKPHSLQISPH
Trigger: ATGGGGAGAGATCTGGAGGCTATGGGGTTTCTTCCATTGCCTTCCCGAGGTCTGAGGCTTTGAATGGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GTGGGTCAGGCTGAGAGACACAGCTTAAGCTCCAGCTaGGTCCCCTCTATGTGCTGGATCACTGATGTTTCA +
Preference number: 3 (lower is better)
Translates to: VGQAERHSLSSS*VPSMCWITDVS
Trigger: TGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTTAAGCTGTGTCTCTCAGCCTGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CTTCTTTGGGGAGGGAGGGAGCATGAGTATAGCCGATaGCGTCTGTTGTCACCTGCCACACTGGACAAAAGA +
Preference number: 3 (lower is better)
Translates to: LLWGGREHEYSR*RLLSPATLDKR
Trigger: TCTTTTGTCCAGTGTGGCAGGTGACAACAGACGCCATCGGCTATACTCATGCTCCCTCCCTCCCCAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CCGTGGAAGACCTCTATGTCATCTACTGGCCCTATCTaGATGCCTCCAGTGATGGATGGCATGACTCTGCTC +
Preference number: 3 (lower is better)
Translates to: PWKTSMSSTGPI*MPPVMDGMTLL
Trigger: GAGCAGAGTCATGCCATCCATCACTGGAGGCATCCAGATAGGGCCAGTAGATGACATAGAGGTCTTCCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGCTCAGGCCTTCATGCTaGCACAGTAAGCACTTTACT +
Preference number: 3 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMLRPSC*HSKHFT
Trigger: AGTAAAGTGCTTACTGTGCAAGCATGAAGGCCTGAG...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TCTCCAGACCTCTGGGATAGCACAGTCCTTGACTTGTaGCATGTGGGTCAGGCTGAGAGACACAGCTTAAGC +
Preference number: 3 (lower is better)
Translates to: SPDLWDSTVLDL*HVGQAERHSLS
Trigger: GCTTAAGCTGTGTCTCTCAGCCTGACCCACATGTCACAAGTCAAGGACTGTGCTATCCCAGAGGTCTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GCACAGTCTGGGCATGACACTGACCCACTGTACACATaGGCTCACAGTGGCTTGGCTGAATTCACGAAGACT +
Preference number: 3 (lower is better)
Translates to: AQSGHDTDPLYT*AHSGLAEFTKT
Trigger: AGTCTTCGTGAATTCAGCCAAGCCACTGTGAGCTCATGTGTACAGTGGGTCAGTGTCATGCCCAGACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAATaGACACTAAGCTCTACCCCACTGTATCCTTACCAG +
Preference number: 3 (lower is better)
Translates to: PTSEHPLDSVPE*TLSSTPLYPYQ
Trigger: CTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CCCCTGATAGATAGATCACCATATCTCGGGAGATACTaGCCACTTCTGAGCACCCTCTGGACAGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: PLIDRSPYLGRY*PLLSTLWTVFL
Trigger: CAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATATGGTGATCTATCTATCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp AGAGGTGTGAGGACAGCCTTTGTATTGTGGCTGCCCTaGTGTGTTGATTCTTCCATTTGTCCCTGGGACTGG +
Preference number: 3 (lower is better)
Translates to: RGVRTAFVLWLP*CVDSSICPWDW
Trigger: CCAGTCCCAGGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGACCTGAACTGAACGCTCTGAGTGGATTTGAGATCTaGAAGTCCTCTCCTCTGCAGGCACCACTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: RPELNALSGFEI*KSSPLQAPLSS
Trigger: GCTTGAGAGTGGTGCCTGCAGAGGAGAGGACTTCCAGATCTCAAATCCACTCAGAGCGTTCAGTTCAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGAGCTCGTGTCTCTAGCTGCATATGTAGCAGAAGATaGCCTAGTCGGCCATCATTGGGAAAAGAGGCCCCT +
Preference number: 3 (lower is better)
Translates to: RARVSSCICSRR*PSRPSLGKEAP
Trigger: AGGGGCCTCTTTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGTCCTCTGAGAGGCCTTaGGTGAGTCTAAGCTCTCAA +
Preference number: 3 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGSSERP*VSLSSQ
Trigger: TTGAGAGCTTAGACTCACCAAAGGCCTCTCAGAGGA...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGAGAGGCAAAAATGGCTaGTGTTTCCTGTCACCTCCC +
Preference number: 3 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGRGKNG*CFLSPP
Trigger: GGGAGGTGACAGGAAACACAAGCCATTTTTGCCTCT...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGTTCTTTACTCTGTGCTaGGGGAAGGAGCTAAGGAGG +
Preference number: 3 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGFFTLC*GKELRR
Trigger: CCTCCTTAGCTCCTTCCCCAAGCACAGAGTAAAGAA...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAAAGCCTCCTGCTTGACTaGAACTTCCTAAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: ISREILPTSEHPLDSVPESLLLD*NFLSPL
Trigger: CAAAGGGCTTAGGAAGTTCAAGTCAAGCAGGAGGCT...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGGCTACTGAGCCATGCTaGGTAAATACAGACAAATGT +
Preference number: 3 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMATEPC*VNTDKC
Trigger: ACATTTGTCTGTATTTACCAAGCATGGCTCAGTAGC...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTAAAGGTGAGAGGTTTATaGCACAGTGATGGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLKVRGL*HSDGGL
Trigger: CAGGCCCCCATCACTGTGCAATAAACCTCTCACCTT...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp TCCTTCCGGATATGTGGTATCGTGGGTGGCAGATCCTaGTTCTTGGCTAAGGAAGGGACAAGGAGATCTCAA +
Preference number: 3 (lower is better)
Translates to: SFRICGIVGGRS*FLAKEGTRRSQ
Trigger: TTGAGATCTCCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp TTGTTGGATTCATTAGATTACCAGAATGAGGTAGAGTaGTCAGGTGGGAACGGGGATCCCAGGGGGCTTGCT +
Preference number: 3 (lower is better)
Translates to: LLDSLDYQNEVE*SGGNGDPRGLA
Trigger: AGCAAGCCCCCTGGGATCCCCGTTCCCACCTGAGCACTCTACCTCATTCTGGTAATCTAATGAATCCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp AGGCACCACTCTCAAGCTTCACAAAATGGTCTCACCTaGCCAATGCCTCTCATGCGCAAGTGCAGTGAATGT +
Preference number: 3 (lower is better)
Translates to: RHHSQASQNGLT*PMPLMRKCSEC
Trigger: ACATTCACTGCACTTGCGCATGAGAGGCATTGGGCAGGTGAGACCATTTTGTGAAGCTTGAGAGTGGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CAGGAAATGCGAAGCCTTATTTGGATCCCAGAGGAATaGTGCTTGCCACTAATCCTCATGCAGACCATGGCC +
Preference number: 3 (lower is better)
Translates to: QEMRSLIWIPEE*CLPLILMQTMA
Trigger: GGCCATGGTCTGCATGAGGATTAGTGGCAAGCAGCATTCCTCTGGGATCCAAATAAGGCTTCGCATTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp AGCAAAGACTGTGATCCATTCAACAGCAAGGTTAACTaGCCCAGGTGGCAGGGAGAGCAAAACCAGGTACCT +
Preference number: 3 (lower is better)
Translates to: SKDCDPFNSKVN*PRWQGEQNQVP
Trigger: AGGTACCTGGTTTTGCTCTCCCTGCCACCTGGGGCAGTTAACCTTGCTGTTGAATGGATCACAGTCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CAGGTGCACACCACCATGTCCAGTTTGCTTTTAATTTaGGCTCTTGGGGTTGGACTCAGGCCTTCATGCTTG +
Preference number: 3 (lower is better)
Translates to: QVHTTMSSLLLI*ALGVGLRPSCL
Trigger: CAAGCATGAAGGCCTGAGTCCAACCCCAAGAGCCCAAATTAAAAGCAAACTGGACATGGTGGTGTGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CTGGCAGGGAAAATCAACATTCTTTGGGTTGGTCCCTaGTGGATAGTTCCCCCTATGCTCCTGAGACTAGGA +
Preference number: 3 (lower is better)
Translates to: LAGKINILWVGP*WIVPPMLLRLG
Trigger: TCCTAGTCTCAGGAGCATAGGGGGAACTATCCACCAGGGACCAACCCAAAGAATGTTGATTTTCCCTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GCAGACATTTGTCTGCCTTTAACTACGGGGGCTGCCTaGCAGGGAAAATCAACATTCTTTGGGTTGGTCCCT +
Preference number: 3 (lower is better)
Translates to: ADICLPLTTGAA*QGKSTFFGLVP
Trigger: AGGGACCAACCCAAAGAATGTTGATTTTCCCTGCCAGGCAGCCCCCGTAGTTAAAGGCAGACAAATGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TCTGGCTTCACAAACATCCACCCCAGTGGCCACAAATaGCATTCACCATATCTCGGGAGATACTGCCCACTT +
Preference number: 3 (lower is better)
Translates to: SGFTNIHPSGHK*HSPYLGRYCPL
Trigger: AAGTGGGCAGTATCTCCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GAGTATGAAGTATTGATTGTTGGGGCCCTAGTAACCTaGAGCCTCCAGGACAGCATGCTAGGTGGCCTTCAA +
Preference number: 3 (lower is better)
Translates to: EYEVLIVGALVT*SLQDSMLGGLQ
Trigger: TTGAAGGCCACCTAGCATGCTGTCCTGGAGGCTCCAGGTTACTAGGGCCCCAACAATCAATACTTCATACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTATTAAACATGTTCCCATaGAGTGCAGGGCCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLLNMFP*SAGPKG
Trigger: ACCCTTGGGCCCTGCACTCAATGGGAACATGTTTAA...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGCTTGGGTTTTCAAGCTaGGGTCTAAGTGAAAATGAA +
Preference number: 3 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMLGFSS*GLSENE
Trigger: TTCATTTTCACTTAGACCCAAGCTTGAAAACCCAAG...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGAGAGAGAGAATCAGTTaGTTTTTAAACACGTTGCCA +
Preference number: 3 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLRERIS*FLNTLP
Trigger: TGGCAACGTGTTTAAAAACAAACTGATTCTCTCTCT...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GCACTCTCTCATCAGTGGCACAGAGCACTTTTGTGGTaGCCTTGGATAGCTGCTGCTTTCTCAGGACAAAGT +
Preference number: 3 (lower is better)
Translates to: ALSHQWHRALLW*PWIAAAFSGQS
Trigger: ACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGCCACTGATGAGAGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TCAGACACAACTGCTCTGAGCATTCTCAAGCGCCTCTaGAATGATAATGAGACAGTGAGTAGGCATGGGCCG +
Preference number: 3 (lower is better)
Translates to: SDTTALSILKRL*NDNETVSRHGP
Trigger: CGGCCCATGCCTACTCACTGTCTCATTATCATTTCAGAGGCGCTTGAGAATGCTCAGAGCAGTTGTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GGGCCTGAGCTGAGTCCGGAAAGAAAAGATCAGAAATaGGCCAAGGAGGCTACTGAGCCATGCTTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: GPELSPERKDQK*AKEATEPCLVN
Trigger: ATTTACCAAGCATGGCTCAGTAGCCTCCTTGGCTCATTTCTGATCTTTTCTTTCCGGACTCAGCTCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GTGAGAGGTTTATTGCACAGTGATGGGGGCCTGAGCTaGGTCCGGAAAGAAAAGATCAGAAATGAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: VRGLLHSDGGLS*VRKEKIRNEPR
Trigger: CCTTGGCTCATTTCTGATCTTTTCTTTCCGGACTCAGCTCAGGCCCCCATCACTGTGCAATAAACCTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp AAGCTCCAGCTGGGTCCCCTCTATGTGCTGGATCACTaGTGTTTCACAATTCCATTCCTTAGGTCCTATGGC +
Preference number: 3 (lower is better)
Translates to: KLQLGPLYVLDH*CFTIPFLRSYG
Trigger: GCCATAGGACCTAAGGAATGGAATTGTGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CTCTTCAAAGAATTTCAGGGGCTCCTGAAGCACCCCTaGACAGCATTGAACAACACCCTTAAGCTAGGCCCA +
Preference number: 3 (lower is better)
Translates to: LFKEFQGLLKHP*TALNNTLKLGP
Trigger: TGGGCCTAGCTTAAGGGTGTTGTTCAATGCTGTTCAGGGGTGCTTCAGGAGCCCCTGAAATTCTTTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CCAGACTCATGGCAGGAAAGCCTTTGTGATGGCCTCTaGTGTGCTTTCTGCTGTAAACCTGTTCTCATTGGG +
Preference number: 3 (lower is better)
Translates to: PDSWQESLCDGL*CAFCCKPVLIG
Trigger: CCCAATGAGAACAGGTTTACAGCAGAAAGCACATCAGAGGCCATCACAAAGGCTTTCCTGCCATGAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GGTTACAGCAGCAAACACTACCAAGGGGAAAAGAGATaGCATAGTAGATCTGGAGCCAGATGGCCACAGACA +
Preference number: 3 (lower is better)
Translates to: GYSSKHYQGEKR*HSRSGARWPQT
Trigger: TGTCTGTGGCCATCTGGCTCCAGATCTACTATGGCATCTCTTTTCCCCTTGGTAGTGTTTGCTGCTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GAAATGCGAAGCCTTATTTGGATCCCAGAGGAATGCTaGTTGCCACTAATCCTCATGCAGACCATGGCCCAA +
Preference number: 3 (lower is better)
Translates to: EMRSLIWIPEEC*LPLILMQTMAQ
Trigger: TTGGGCCATGGTCTGCATGAGGATTAGTGGCAAGCAGCATTCCTCTGGGATCCAAATAAGGCTTCGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GTGTGTATTTACATGACACACTGCAAGAATGAACAGTaGAGTATCCCCCACCCCACCAAGGGATGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: VCIYMTHCKNEQ*SIPHPTKGCCG
Trigger: TCCACAGCATCCCTTGGTGGGGTGGGGGATACTGCACTGTTCATTCTTGCAGTGTGTCATGTAAATACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GCAGGGAAAATCAACATTCTTTGGGTTGGTCCCTGGTaGATAGTTCCCCCTATGCTCCTGAGACTAGGATGT +
Preference number: 3 (lower is better)
Translates to: AGKINILWVGPW*IVPPMLLRLGC
Trigger: ACATCCTAGTCTCAGGAGCATAGGGGGAACTATCCACCAGGGACCAACCCAAAGAATGTTGATTTTCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGACAAAGTCCAGACAAGTGTCCTGGCAGTCCCCTCTaGTGCCCAGGTTCTTTTTCTCTAACAAGGCAAGTA +
Preference number: 3 (lower is better)
Translates to: RQSPDKCPGSPL*CPGSFSLTRQV
Trigger: TACTTGCCTTGTTAGAGAAAAAGAACCTGGGCACCAGAGGGGACTGCCAGGACACTTGTCTGGACTTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CAAGTCCTGCCAGCTTGCCTGAATTGGCCTTTGAAGTaGAGGACTCTGGAGCTTATATTGAACACCTCCCTT +
Preference number: 3 (lower is better)
Translates to: QVLPACLNWPLK*RTLELILNTSL
Trigger: AAGGGAGGTGTTCAATATAAGCTCCAGAGTCCTCCACTTCAAAGGCCAATTCAGGCAAGCTGGCAGGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AATCAGATAGTGTCTCTGCAGGTGAGCTATCACTGCTaGGAACAAAGGCGGCTGTTATGCACTGTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: NQIVSLQVSYHC*EQRRLLCTVLQ
Trigger: CTGAAGGACAGTGCATAACAGCCGCCTTTGTTCCCAGCAGTGATAGCTCACCTGCAGAGACACTATCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ACACTGACCCACTGTACACATGAGCTCACAGTGGCTTaGCTGAATTCACGAAGACTGCTTAAGCTCAAGCCA +
Preference number: 3 (lower is better)
Translates to: TLTHCTHELTVA*LNSRRLLKLKP
Trigger: TGGCTTGAGCTTAAGCAGTCTTCGTGAATTCAGCCAAGCCACTGTGAGCTCATGTGTACAGTGGGTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GATTTAAGGCCTACTACACAGGAGGAAATACATGCCTaGGTCTGTACATCCACCCAAGAATCCATGGCTGGG +
Preference number: 3 (lower is better)
Translates to: DLRPTTQEEIHA*VCTSTQESMAG
Trigger: CCCAGCCATGGATTCTTGGGTGGATGTACAGACCCAGGCATGTATTTCCTCCTGTGTAGTAGGCCTTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GAATGCCTAAGAGGTGTGAGGACAGCCTTTGTATTGTaGCTGCCCTGCTGTGTTGATTCTTCCATTTGTCCC +
Preference number: 3 (lower is better)
Translates to: ECLRGVRTAFVL*LPCCVDSSICP
Trigger: GGGACAAATGGAAGAATCAACACAGCAGGGCAGCCACAATACAAAGGCTGTCCTCACACCTCTTAGGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CAGACTGGGTGTTGGGGGCTTTTAGCAATTATGACCTaGTTTCATTCACCCAGACTCATGGCAGGAAAGCCT +
Preference number: 3 (lower is better)
Translates to: QTGCWGLLAIMT*FHSPRLMAGKP
Trigger: AGGCTTTCCTGCCATGAGTCTGGGTGAATGAAACCAGGTCATAATTGCTAAAAGCCCCCAACACCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGTATAGCCGATGGCGTCTGTTGTCACCTGCCACACTaGACAAAAGAGCAGAGGGAGATTTTTATCTACCCC +
Preference number: 3 (lower is better)
Translates to: SIADGVCCHLPH*TKEQREIFIYP
Trigger: GGGGTAGATAAAAATCTCCCTCTGCTCTTTTGTCCAGTGTGGCAGGTGACAACAGACGCCATCGGCTATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp ACTAGCACCCAGGAGGCTGAGGCATGGGGATTGCTTATCACTACCAGATCTACTCAGTTTGCTTTTAATTaGGGCTCTTGGGGTTGGACT +
Preference number: 3 (lower is better)
Translates to: TSTQEAEAWGLLITTRSTQFAFN*GSWGWT
Trigger: AGTCCAACCCCAAGAGCCCAAATTAAAAGCAAACTG...AGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR-3UTR CAA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTGGTCAAATCCATTTTTaGCCATCTGCCAATCAGCAT +
Preference number: 3 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIGQIHF*PSANQH
Trigger: ATGCTGATTGGCAGATGGCAAAAAATGGATTTGACC...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TCAAATCTCTTGAGTCCTATTTCATCAGCTTACAGCTaGCGGCAGGTGTGTCACAGGGAAGGCAATGTTGCC +
Preference number: 3 (lower is better)
Translates to: SNLLSPISSAYS*RQVCHREGNVA
Trigger: GGCAACATTGCCTTCCCTGTGACACACCTGCCGTCAGCTGTAAGCTGATGAAATAGGACTCAAGAGATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp ACAAGCAGACATTTGTCTGCCTTTAACTACGGGGGCTaGCTGGCAGGGAAAATCAACATTCTTTGGGTTGGT +
Preference number: 3 (lower is better)
Translates to: TSRHLSAFNYGG*LAGKINILWVG
Trigger: ACCAACCCAAAGAATGTTGATTTTCCCTGCCAGGCAGCCCCCGTAGTTAAAGGCAGACAAATGTCTGCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp AATGGTCTCACCTGCCCAATGCCTCTCATGCGCAAGTaGAGTGAATGTGACTCTTTAACTAGCAGGAGTCAA +
Preference number: 3 (lower is better)
Translates to: NGLTCPMPLMRK*SECDSLTSRSQ
Trigger: TTGACTCCTGCTAGTTAAAGAGTCACATTCACTGCACTTGCGCATGAGAGGCATTGGGCAGGTGAGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTaGTATGCAGGGTGCCTGGAAAATGTCACTAACAGT +
Preference number: 3 (lower is better)
Translates to: PLWLANSHRTGM*YAGCLENVTNS
Trigger: ACTGTTAGTGACATTTTCCAGGCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GGGGAAAAGAGATGCCATAGTAGATCTGGAGCCAGATaGCCACAGACAACCTCACTTTCAGCATCACTAAGA +
Preference number: 3 (lower is better)
Translates to: GEKRCHSRSGAR*PQTTSLSASLR
Trigger: TCTTAGTGATGCTGAAAGTGAGGTTGTCTGTGGCCATCTGGCTCCAGATCTACTATGGCATCTCTTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CCACCATCTTCCTACTTTCCTGGGCTCCTTTACCTATaGCATGCAAATCAGAAGGTGACTTCCTGCTCAGAT +
Preference number: 3 (lower is better)
Translates to: PPSSYFPGLLYL*HANQKVTSCSD
Trigger: ATCTGAGCAGGAAGTCACCTTCTGATTTGCATGCCATAGGTAAAGGAGCCCAGGAAAGTAGGAAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AATTACAGTGTACATCCTTCCGGATATGTGGTATCGTaGGTGGCAGATCCTGCTTCTTGGCTAAGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: NYSVHPSGYVVS*VADPASWLRKG
Trigger: TCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCGGAAGGATGTACACTGTAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GGTCAAATCCTGACAACACATAACCTTTGGTTCATCTaGCAGCCACACCATAGCCAAGCAAGCACAGTGCTT +
Preference number: 3 (lower is better)
Translates to: GQILTTHNLWFI*QPHHSQASTVL
Trigger: AAGCACTGTGCTTGCTTGGCTATGGTGTGGCTGCCAGATGAACCAAAGGTTATGTGTTGTCAGGATTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CACAGCTTAAGCTCCAGCTGGGTCCCCTCTATGTGCTaGATCACTGATGTTTCACAATTCCATTCCTTAGGT +
Preference number: 3 (lower is better)
Translates to: HSLSSSWVPSMC*ITDVSQFHSLG
Trigger: ACCTAAGGAATGGAATTGTGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTTAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CATGCCTATAATACTAGCACCCAGGAGGCTGAGGCATaGGGATTGCTTATCACTACCAGATCTACTGCAAGT +
Preference number: 3 (lower is better)
Translates to: HAYNTSTQEAEA*GLLITTRSTAS
Trigger: ACTTGCAGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGTATTATAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp TTGCCCCCACTCAGAATATCATTAGAAGAGGTACCCTaGGCAAGTCTGCCTAGGTTTGGTTTCTTGGAAGTG +
Preference number: 3 (lower is better)
Translates to: LPPLRISLEEVP*ASLPRFGFLEV
Trigger: CACTTCCAAGAAACCAAACCTAGGCAGACTTGCCCAGGGTACCTCTTCTAATGATATTCTGAGTGGGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ATGGATGGCATGACTCTGCTCACCCTCCGTGGCAGATaGCAAAAACAAAAGCAATATAGGAAGATGCAGGAG +
Preference number: 3 (lower is better)
Translates to: MDGMTLLTLRGR*QKQKQYRKMQE
Trigger: CTCCTGCATCTTCCTATATTGCTTTTGTTTTTGCCATCTGCCACGGAGGGTGAGCAGAGTCATGCCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GAGGACTCTGGAGCTTATATTGAACACCTCCCTTGGTaGCAGTTGAGGATGAGGAAGTTTAAGAGTCACCGT +
Preference number: 3 (lower is better)
Translates to: EDSGAYIEHLPW*QLRMRKFKSHR
Trigger: ACGGTGACTCTTAAACTTCCTCATCCTCAACTGTCACCAAGGGAGGTGTTCAATATAAGCTCCAGAGTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp AAAGGGGTCTGCAACCCTATAGGTGGAACAACAATATaGACTAACCAGTACCCACCAGAGCTCGTGTCTCTA +
Preference number: 3 (lower is better)
Translates to: KGVCNPIGGTTI*TNQYPPELVSL
Trigger: TAGAGACACGAGCTCTGGTGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGACCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GGGGATTGCTTATCACTACCAGATCTACTGCAAGTTTaGGACCAATGTGGGCTCGGTGGTGAATTAAAGGTC +
Preference number: 3 (lower is better)
Translates to: GDCLSLPDLLQV*DQCGLGGELKV
Trigger: GACCTTTAATTCACCACCGAGCCCACATTGGTCTCAAACTTGCAGTAGATCTGGTAGTGATAAGCAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GCACAGAGCACTTTTGTGGTGACCTTGGATAGCTGCTaGTTTCTCAGGACAAAGTTGCAGAATGTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: AQSTFVVTLDSC*FLRTKLQNVGN
Trigger: ATTACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTATCCAAGGTCACCACAAAAGTGCTCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp AGACACAGCTTAAGCTCCAGCTGGGTCCCCTCTATGTaGTGGATCACTGATGTTTCACAATTCCATTCCTTA +
Preference number: 3 (lower is better)
Translates to: RHSLSSSWVPSM*WITDVSQFHSL
Trigger: TAAGGAATGGAATTGTGAAACATCAGTGATCCAGCACATAGAGGGGACCCAGCTGGAGCTTAAGCTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp ATTGGATTTAAGGCCTACTACACAGGAGGAAATACATaGCTGGGTCTGTACATCCACCCAAGAATCCATGGC +
Preference number: 3 (lower is better)
Translates to: IGFKAYYTGGNT*LGLYIHPRIHG
Trigger: GCCATGGATTCTTGGGTGGATGTACAGACCCAGGCATGTATTTCCTCCTGTGTAGTAGGCCTTAAATCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ATCATAGAATCCCAAGTCCTGCCAGCTTGCCTGAATTaGCCTTTGAAGTGGAGGACTCTGGAGCTTATATTG +
Preference number: 3 (lower is better)
Translates to: IIESQVLPACLN*PLKWRTLELIL
Trigger: CAATATAAGCTCCAGAGTCCTCCACTTCAAAGGCCAATTCAGGCAAGCTGGCAGGACTTGGGATTCTATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp CAGAGGTCAAAGGAAACACTGCCCAGGCTGGACATCTaGGATTGTGGACATATAATCCAGACATTTAAGACC +
Preference number: 3 (lower is better)
Translates to: QRSKETLPRLDI*DCGHIIQTFKT
Trigger: GGTCTTAAATGTCTGGATTATATGTCCACAATCCCAGATGTCCAGCCTGGGCAGTGTTTCCTTTGACCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCCTaGAAAATGTCACTAACAGTCTTAGCCAGCTGTGAA +
Preference number: 3 (lower is better)
Translates to: TLIGLECAMQGA*KMSLTVLASCE
Trigger: TTCACAGCTGGCTAAGACTGTTAGTGACATTTTCCAGGCACCCTGCATAGCACATTCCAGTCCTATGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp AAAACACACATTGTTGGATTCATTAGATTACCAGAATaGGGTAGAGTGCTCAGGTGGGAACGGGGATCCCAG +
Preference number: 3 (lower is better)
Translates to: KTHIVGFIRLPE*GRVLRWERGSQ
Trigger: CTGGGATCCCCGTTCCCACCTGAGCACTCTACCTCATTCTGGTAATCTAATGAATCCAACAATGTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp ATACACATCAGACACAGGATGTGGGAAAATCAAGACTaGTCAGGAAGCTTCCTCTATGGCTGGCTAACTCTC +
Preference number: 3 (lower is better)
Translates to: IHIRHRMWENQD*SGSFLYGWLTL
Trigger: GAGAGTTAGCCAGCCATAGAGGAAGCTTCCTGATCAGTCTTGATTTTCCCACATCCTGTGTCTGATGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CTTAGGTCCTATGGCTCCTCCCTCCTAGAAGTTGACTaGCCAAAGTGTTCATCTTTTGTTCTTTACTCTGTG +
Preference number: 3 (lower is better)
Translates to: LRSYGSSLLEVD*PKCSSFVLYSV
Trigger: CACAGAGTAAAGAACAAAAGATGAACACTTTGGGCAGTCAACTTCTAGGAGGGAGGAGCCATAGGACCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp ATAGCTGCTGCTTTCTCAGGACAAAGTTGCAGAATGTaGGTAATGAGCCACCAGGATAATAGAGCCCAGTAT +
Preference number: 3 (lower is better)
Translates to: IAAAFSGQSCRM*VMSHQDNRAQY
Trigger: ATACTGGGCTCTATTATCCTGGTGGCTCATTACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGCAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp GTGGGAAAATCAAGACTGATCAGGAAGCTTCCTCTATaGCTGGCTAACTCTCATAGGACTGGAATGTGCTAT +
Preference number: 3 (lower is better)
Translates to: VGKSRLIRKLPL*LANSHRTGMCY
Trigger: ATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAGCTTCCTGATCAGTCTTGATTTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TGGTGCCCAGGTTCTTTTTCTCTAACAAGGCAAGTATaGGCATACCTCTCCCAGCAATGGGAGGATATTAAA +
Preference number: 3 (lower is better)
Translates to: WCPGSFSLTRQV*AYLSQQWEDIK
Trigger: TTTAATATCCTCCCATTGCTGGGAGAGGTATGCTCATACTTGCCTTGTTAGAGAAAAAGAACCTGGGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CAGAGAGTAAGAGACTTTAGAGTACACAGCCCTAACTaGGACATCGATATTACGCCTTCTTCACCAAGACTC +
Preference number: 3 (lower is better)
Translates to: QRVRDFRVHSPN*DIDITPSSPRL
Trigger: GAGTCTTGGTGAAGAAGGCGTAATATCGATGTCTCAGTTAGGGCTGTGTACTCTAAAGTCTCTTACTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGGTTTGGTTTCTTGGAAGTGAACTGTAGCTGTATATaGTGGTTCATGCCTATAATACTAGCACCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: RFGFLEVNCSCI*WFMPIILAPRR
Trigger: CCTCCTGGGTGCTAGTATTATAGGCATGAACCACCATATACAGCTACAGTTCACTTCCAAGAAACCAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CTGGGCTCCTTTACCTATGGCATGCAAATCAGAAGGTaGCTTCCTGCTCAGATTTCATGGAATCTAACATTA +
Preference number: 3 (lower is better)
Translates to: LGSFTYGMQIRR*LPAQISWNLTL
Trigger: TAATGTTAGATTCCATGAAATCTGAGCAGGAAGTCACCTTCTGATTTGCATGCCATAGGTAAAGGAGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CCATTCATCCTTTGCCCAACTTTAGCAGTAGTTGTGTaGAAGGAGGAGTTATTTTGTCTGTGCTGTCTTAGC +
Preference number: 3 (lower is better)
Translates to: PFILCPTLAVVV*KEELFCLCCLS
Trigger: GCTAAGACAGCACAGACAAAATAACTCCTCCTTTCACACAACTACTGCTAAAGTTGGGCAAAGGATGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GTGGGTGTACATGGTAAAGCAGAGCTCTGCTGCTGTTaGTTTGATTCACATTTGGCCTTTAAATGTGAAGTG +
Preference number: 3 (lower is better)
Translates to: VGVHGKAELCCC*FDSHLAFKCEV
Trigger: CACTTCACATTTAAAGGCCAAATGTGAATCAAATCAACAGCAGCAGAGCTCTGCTTTACCATGTACACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp TGTTCTCCAGGAGGGACTGTGTTTACACGTTTCTTGTaGAACAGGATTGCTGAGGTTTGGAATCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: CSPGGTVFTRFL*NRIAEVWNHFS
Trigger: ACTGAAATGATTCCAAACCTCAGCAATCCTGTTTCACAAGAAACGTGTAAACACAGTCCCTCCTGGAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp ATTACCCTGTTTACCTTCTTCCCTCAAGTCTCTGTGTaGCCAGGACTCAACAATCTTCTCTATAAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: ITLFTFFPQVSV*PGLNNLLYKVK
Trigger: CTTCACTTTATAGAGAAGATTGTTGAGTCCTGGGCACACAGAGACTTGAGGGAAGAAGGTAAACAGGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp ACTCCACAAGTGTTTCTGTTCATTTTCCTAAGAATCTaGTATCGAGGAACTGAAGCACTGCAGAAACCAACC +
Preference number: 3 (lower is better)
Translates to: TPQVFLFIFLRI*YRGTEALQKPT
Trigger: GGTTGGTTTCTGCAGTGCTTCAGTTCCTCGATAGCAGATTCTTAGGAAAATGAACAGAAACACTTGTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CCA 72 bp AGGGGAGTAAATATAATGGTGACTATGCAGACTTATTaGGCATGTGTGAGGGCAAAAGGGAAATACCATGTC +
Preference number: 3 (lower is better)
Translates to: RGVNIMVTMQTY*ACVRAKGKYHV
Trigger: GACATGGTATTTCCCTTTTGCCCTCACACATGCCCAATAAGTCTGCATAGTCACCATTATATTTACTCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GGAAAGAAAAGATCAGAAATGAGCCAAGGAGGCTACTaGGCCATGCTTGGTAAATACAGACAAATGTCTACA +
Preference number: 3 (lower is better)
Translates to: GKKRSEMSQGGY*AMLGKYRQMST
Trigger: TGTAGACATTTGTCTGTATTTACCAAGCATGGCTCAGTAGCCTCCTTGGCTCATTTCTGATCTTTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CACATTTGGCCTTTAAATGTGAAGTGTGTATTTACATaGCACACTGCAAGAATGAACAGTGCAGTATCCCCC +
Preference number: 3 (lower is better)
Translates to: HIWPLNVKCVFT*HTARMNSAVSP
Trigger: GGGGGATACTGCACTGTTCATTCTTGCAGTGTGTCATGTAAATACACACTTCACATTTAAAGGCCAAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp CAAGGAGATCTCAATTCAACTCAGGGTACAATATGTTaGCTATACAGAGCAAGCAGAGATTTTCCAGGGTTA +
Preference number: 3 (lower is better)
Translates to: QGDLNSTQGTIC*LYRASRDFPGL
Trigger: TAACCCTGGAAAATCTCTGCTTGCTCTGTATAGGCAACATATTGTACCCTGAGTTGAATTGAGATCTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR GCA 72 bp GAGATAGCATTAAACTGCCCCCTAAATTTATATTTCTaGCCAGACATTGATGTATCTTTGAAACCTCGTCAG +
Preference number: 3 (lower is better)
Translates to: EIALNCPLNLYF*PDIDVSLKPRQ
Trigger: CTGACGAGGTTTCAAAGATACATCAATGTCTGGGCAGAAATATAAATTTAGGGGGCAGTTTAATGCTATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTaGCTCAGCCACCTGAACACCAATATATACATCATA +
Preference number: 3 (lower is better)
Translates to: HLRPSFYSWKIT*LSHLNTNIYII
Trigger: TATGATGTATATATTGGTGTTCAGGTGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp GACTGTGTTTACACGTTTCTTGTGAAACAGGATTGCTaGGGTTTGGAATCATTTCAGTTTGCAAAGAAACTT +
Preference number: 3 (lower is better)
Translates to: DCVYTFLVKQDC*GLESFQFAKKL
Trigger: AAGTTTCTTTGCAAACTGAAATGATTCCAAACCTCAGCAATCCTGTTTCACAAGAAACGTGTAAACACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR TCA 72 bp CTTTCTACAGTTGGAAGATCACTTGACTCAGCCACCTaGACACCAATATATACATCATATATAGATCATAGA +
Preference number: 3 (lower is better)
Translates to: LSTVGRSLDSAT*TPIYTSYIDHR
Trigger: TCTATGATCTATATATGATGTATATATTGGTGTTCAGGTGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp AAGAGCAGGCTGGAGGGAGATGCTGTGCCCTTCCACCCTCTCCCTACCGCAAACAAGAGCGCCGGCGCCTaGCGGCGGATGTCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KSRLEGDAVPFHPLPTANKSAGA*RRMSAL
Trigger: CAGCGCTGACATCCGCCGCCAGGCGCCGGCGCTCTT...GTTTGCGGTAGGGAGAGGGTGGAAGGGCACAGCATCTCCCTCCAGCCTGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp GTCAGCATCACGGCAATCACCAGGCAATGGTGGCAGTTATTGTCCACCCAGGAGGGCCGGCTGCCGTTGTaGCACGACGCCGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: VSITAITRQWWQLLSTQEGRLPL*HDAGQC
Trigger: ACACTGGCCGGCGTCGTGGCACAACGGCAGCCGGCC...CTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTCGTCCGGCCGCCGGCTaGACAGTGTGCACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSRPAAG*TVCTRH
Trigger: ATGCCTCGTGCACACTGTGCAGCCGGCGGCCGGACG...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGGCAGCACCAGCCCGTTaGACAGCAGCGACACGCCGA +
Preference number: 4 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMAAPAR*TAATRR
Trigger: TCGGCGTGTCGCTGCTGTCCAACGGGCTGGTGCTGC...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp TTCCCTACCAACTCAGATCCCAGATATGGAGGTAGGACAGACCAGCCACCATCTCGGTGGCCGGGAAGGTaGGCGCGTGCAGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: FPTNSDPRYGGRTDQPPSRWPGR*ARAATC
Trigger: ACACGTGGCTGCACGCGCTCACCTTCCCGGCCACCG...AGATGGTGGCTGGTCTGTCCTACCTCCATATCTGGGATCTGAGTTGGTAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp GTCAGCATCACGGCAATCACCAGGCAATGGTGGCAGTTATTGTCCACCCAGGAGAGGAGAGCAGGAAGCTaGGCGCATGGAAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VSITAITRQWWQLLSTQERRAGS*AHGRRW
Trigger: CCAGCGCCTTCCATGCGCTCAGCTTCCTGCTCTCCT...CTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGGCTCCTTGCAGCTCCTaGGGTATTGGTGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLAPCSS*GIGVAA
Trigger: TGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGC...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp ACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGGCTGGAGGCATATAGCTGGTaGAAGCCGAGCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: TVAFCSLCLVPRVQLFGLEAYSW*KPSQDR
Trigger: CCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTC...CAGCCCAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp ACAAGACAGTGGCCTTCTGCTCCCTGTGTCTGGTACCCAGGGTTCAGCTGTTTGGCCGGCTGCACAGTGTaGACGAGGCATATAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRQWPSAPCVWYPGFSCLAGCTV*TRHIAG
Trigger: ACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGC...CAAACAGCTGAACCCTGGGTACCAGACACAGGGAGCAGAAGGCCACTGTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGTCACGTCGATGCGCTTaGAGTGGAAGCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGSRRCA*SGSGPP
Trigger: AGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGA...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp CTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGGACGCACACTAAGCTCTTGTAGGCCAAGCACTTaGACAGCACTCCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LPTSEHPLDSVPGRTLSSCRPST*TALPSE
Trigger: CTCACTGGGGAGTGCTGTCCAAGTGCTTGGCCTACA...AGAGCTTAGTGTGCGTCCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GGAGGGAGGGAGCATGAGTATAGCCGATGGCGTCTGTaGTCACCTGCCACACTGGACAAAAGAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGREHEYSRWRL*SPATLDKRAEG
Trigger: TCCCTCTGCTCTTTTGTCCAGTGTGGCAGGTGACAACAGACGCCATCGGCTATACTCATGCTCCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCCATGGAAGGCGCTGGTaGAGACAGCAAAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCHGRRW*RQQSAG
Trigger: GCCTGCGCTTTGCTGTCTTCACCAGCGCCTTCCATG...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp TTCCCTACCAACTCAGATCCCAGATATGGAGGTAGGACAGACCAGCCACCATCTTCGATGCGCTTGCAGTaGAAGCGGGCCACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FPTNSDPRYGGRTDQPPSSMRLQ*KRATLS
Trigger: GCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGA...AGATGGTGGCTGGTCTGTCCTACCTCCATATCTGGGATCTGAGTTGGTAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GGGAGAGCAAAACCAGGTACCTTTGGGGATGGCTGCTaGCAACTCAGAGCAACTGGGTTTCCTGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GRAKPGTFGDGC*QLRATGFPAGD
Trigger: GTCTCCTGCAGGAAACCCAGTTGCTCTGAGTTGCAAGCAGCCATCCCCAAAGGTACCTGGTTTTGCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp ACTAGCACCCAGGAGGCTGAGGCATGGGGATTGCTTATCACTACCAGATCTACTCAAGCGTCTGCATGGTaGTCACGTCGATGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TSTQEAEAWGLLITTRSTQASAW*SRRCAC
Trigger: GCAAGCGCATCGACGTGATCACCATGCAGACGCTTG...AGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTAGACAGCACTCCCCAGTaGGAGCCAATGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLDSTPQ*EPMGAV
Trigger: CACAGCACCCATTGGCTCTCACTGGGGAGTGCTGTC...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp CTGCAGGCTGTACTAGCACGTCTGGCCCAAAGCCCACTGCCTCTTCAAAGAATTAGAATGTTCTGGCTGTaGGAGTCACCTGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LQAVLARLAQSPLPLQRIRMFWL*ESPVRP
Trigger: GGGCCTCACAGGTGACTCTCACAGCCAGAACATTCT...AATTCTTTGAAGAGGCAGTGGGCTTTGGGCCAGACGTGCTAGTACAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp CTTCCTCTATGGCTGGCTAACTCTCATAGGACTGGAATGTGCTATGCAGGGTGCGGTCAGAAGCGGCCTTaGTGTAGGCCAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LPLWLANSHRTGMCYAGCGQKRP*CRPSTW
Trigger: CCAAGTGCTTGGCCTACAGCAAGGCCGCTTCTGACC...GCACCCTGCATAGCACATTCCAGTCCTATGAGAGTTAGCCAGCCATAGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp TTCCCTACCAACTCAGATCCCAGATATGGAGGTAGGACAGACCAGCCACCATCTCACGAGGCATATAGCTaGTGGAAGCCGAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FPTNSDPRYGGRTDQPPSHEAYS*WKPSQD
Trigger: GTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTG...AGATGGTGGCTGGTCTGTCCTACCTCCATATCTGGGATCTGAGTTGGTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGAAAGAAAGGCCAGGGCGTGGCCTATGGCCATCCTTaGGCGACAAATAGGGACAGTCTGACATCTACCCTG +
Preference number: 4 (lower is better)
Translates to: RKKGQGVAYGHP*ATNRDSLTSTL
Trigger: CAGGGTAGATGTCAGACTGTCCCTATTTGTCGCCAAAGGATGGCCATAGGCCACGCCCTGGCCTTTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp CTAAACCTGGGGACAGGTGACAACCAGTCCACAGGCTaGGCTCTACCCTGTCTGCCTTCTCTCAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LNLGTGDNQSTG*ALPCLPSLKDK
Trigger: TTTGTCCTTGAGAGAAGGCAGACAGGGTAGAGCCAAGCCTGTGGACTGGTTGTCACCTGTCCCCAGGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GAGCCCATTCTCCAGACCTCTGGGATAGCACAGTCCTaGACTTGTGACATGTGGGTCAGGCTGAGAGACACA +
Preference number: 4 (lower is better)
Translates to: EPILQTSGIAQS*TCDMWVRLRDT
Trigger: TGTGTCTCTCAGCCTGACCCACATGTCACAAGTCAAGGACTGTGCTATCCCAGAGGTCTGGAGAATGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp GGCTTCACAAACATCCACCCCAGTGGCCACAAATGGCATTCACCATATCTCGGGCCCAGTGAGAGCCAATaGGTGCTGTGGAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GFTNIHPSGHKWHSPYLGPSESQ*VLWRRV
Trigger: AACTCTTCTCCACAGCACCCATTGGCTCTCACTGGG...CCCGAGATATGGTGAATGCCATTTGTGGCCACTGGGGTGGATGTTTGTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGCACACAGCAGCTTCTGAAGAGAGGCAAAAATGGCTaGTGTTTCCTGTCACCTCCCTTAGGTCAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: STQQLLKRGKNG*CFLSPPLGQAR
Trigger: CCTCGCCTGACCTAAGGGAGGTGACAGGAAACACAAGCCATTTTTGCCTCTCTTCAGAAGCTGCTGTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp GCTCCCAATGGATTGGCATGTATATTACAGGAACAGCATCTTGTACTAACTGCAACGTGTAGGCCACCATaGAGGCGGCATCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: APNGLACILQEQHLVLTATCRPP*RRHLGG
Trigger: GCCTCCGAGATGCCGCCTTCATGGTGGCCTACACGT...TGCAGTTAGTACAAGATGCTGTTCCTGTAATATACATGCCAATCCATTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TCTACTGACCCCACCCTCTGGGTCCCCATTCATCCTTaGCCCAACTTTAGCAGTAGTTGTGTGAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: STDPTLWVPIHP*PNFSSSCVKGG
Trigger: TCCTCCTTTCACACAACTACTGCTAAAGTTGGGCAAAGGATGAATGGGGACCCAGAGGGTGGGGTCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp ACAGGTGCACACCACCATGTCCAGTTTGCTTTTAATTaGGGCTCTTGGGGTTGGACTCAGGCCTTCATGCTT +
Preference number: 4 (lower is better)
Translates to: TGAHHHVQFAFN*GSWGWTQAFML
Trigger: AAGCATGAAGGCCTGAGTCCAACCCCAAGAGCCCAAATTAAAAGCAAACTGGACATGGTGGTGTGCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp CGGATATGTGGTATCGTGGGTGGCAGATCCTGCTTCTaGGCTAAGGAAGGGACAAGGAGATCTCAATTCAAC +
Preference number: 4 (lower is better)
Translates to: RICGIVGGRSCF*AKEGTRRSQFN
Trigger: GTTGAATTGAGATCTCCTTGTCCCTTCCTTAGCCAAGAAGCAGGATCTGCCACCCACGATACCACATATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGGGGATCACAAAGCCCCACTCTGATTGAGGAGTTATaGGTAGTGATGGCTGCTGGAGAAGGAGTATCAGTG +
Preference number: 4 (lower is better)
Translates to: RGSQSPTLIEEL*VVMAAGEGVSV
Trigger: CACTGATACTCCTTCTCCAGCAGCCATCACTACCAATAACTCCTCAATCAGAGTGGGGCTTTGTGATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGACTCAGCAGCCATCTTGAAGATGCAGTAGAAAGATaGTCAGAGCCAGAAGCTGGGAGGATTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: RLSSHLEDAVER*SEPEAGRIAAQ
Trigger: CTGTGCTGCAATCCTCCCAGCTTCTGGCTCTGACAATCTTTCTACTGCATCTTCAAGATGGCTGCTGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR GCA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAAGGTAATCACATAGGGTaGAAAGCACACAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: ISREILPTSEHPLDSVPEGNHIG*KAHKEG
Trigger: ACCTTCCTTGTGTGCTTTGCACCCTATGTGATTACC...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CCA 90 bp ATCCAGACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTGACTCAGCCACTCGGAGGCGCATCTTaGCACGGTAGCTCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: IQTFKTIFLQLEDHLTQPLGGAS*HGSSAE
Trigger: TTCCGCTGAGCTACCGTGCCAAGATGCGCCTCCGAG...TGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGTCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TTGACACTAACTGGCCTACCGTCCTCTGAGAGGCCTTaGGTGAGTCTAAGCTCTCAATACACACTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LTLTGLPSSERP*VSLSSQYTLSE
Trigger: TTCTGAGAGTGTGTATTGAGAGCTTAGACTCACCAAAGGCCTCTCAGAGGACGGTAGGCCAGTTAGTGTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp CGCAGGCATGTGGAGGCCAGAGGTCAACCTCACGTGTaGTTTCTAAGCTGGCATCTACTTTGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RRHVEARGQPHV*FLSWHLLCSFL
Trigger: AAGAAAAGAACAAAGTAGATGCCAGCTTAGAAACAACACGTGAGGTTGACCTCTGGCCTCCACATGCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GCCTCTGATGTGCTTTCTGCTGTAAACCTGTTCTCATaGGGTATTAGTGAGTGTGGCCTAAGCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASDVLSAVNLFS*GISECGLSLSL
Trigger: CAGACTCAGGCTTAGGCCACACTCACTAATACCCAATGAGAACAGGTTTACAGCAGAAAGCACATCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR TCA 90 bp ATCCAGACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTTGACTCAGCCATGTGAGAGTCACCTGTaGGGCCCACAGAGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: IQTFKTIFLQLEDHLTQPCESHL*GPQSEG
Trigger: CCCTTCACTCTGTGGGCCTCACAGGTGACTCTCACA...TGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGTCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TCAAGCCAGTCAATGAGGCCCTTTGCCTCGGCTCTGTaGTTGTTTTTATGCCTGGAACCTGAGAAAAACACA +
Preference number: 4 (lower is better)
Translates to: SSQSMRPFASAL*LFLCLEPEKNT
Trigger: TGTGTTTTTCTCAGGTTCCAGGCATAAAAACAACAACAGAGCCGAGGCAAAGGGCCTCATTGACTGGCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GATCATAGAATCCCAAGTCCTGCCAGCTTGCCTGAATaGGCCTTTGAAGTGGAGGACTCTGGAGCTTATATT +
Preference number: 4 (lower is better)
Translates to: DHRIPSPASLPE*AFEVEDSGAYI
Trigger: AATATAAGCTCCAGAGTCCTCCACTTCAAAGGCCAATTCAGGCAAGCTGGCAGGACTTGGGATTCTATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TGCATATGTAGCAGAAGATGGCCTAGTCGGCCATCATaGGGAAAAGAGGCCCCTTGGTCTTGCAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: CICSRRWPSRPS*GKEAPWSCKLY
Trigger: ATAAAGTTTGCAAGACCAAGGGGCCTCTTTTCCCAATGATGGCCGACTAGGCCATCTTCTGCTACATATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp ACGAACACACAGCAAAGGTCATGGACCATCATGAGGTaGGGGAGAATCAGACTGAAAATCTTTGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TNTQQRSWTIMR*GRIRLKIFVSS
Trigger: AGAAGACACAAAGATTTTCAGTCTGATTCTCCCCAACCTCATGATGGTCCATGACCTTTGCTGTGTGTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TTATTTTGTCTGTGCTGTCTTAGCCTCCTGCTTGACTaGAACTTCCTAAGCCCTTTGAGTGTTGCGATAACA +
Preference number: 4 (lower is better)
Translates to: LFCLCCLSLLLD*NFLSPLSVAIT
Trigger: TGTTATCGCAACACTCAAAGGGCTTAGGAAGTTCAAGTCAAGCAGGAGGCTAAGACAGCACAGACAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGAATCAGTTTGTTTTTAAACACGTTGCCAGATAGGTaGACCATGCTCCAATGGCCCCACTCCTGTATATGT +
Preference number: 4 (lower is better)
Translates to: RISLFLNTLPDR*TMLQWPHSCIC
Trigger: ACATATACAGGAGTGGGGCCATTGGAGCATGGTCAACCTATCTGGCAACGTGTTTAAAAACAAACTGATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGACAGTGTACAGCTCTTGCAAGAGAGAGAATCAGTTaGTTTTTAAACACGTTGCCAGATAGGTTGACCATG +
Preference number: 4 (lower is better)
Translates to: RQCTALARERIS*FLNTLPDRLTM
Trigger: CATGGTCAACCTATCTGGCAACGTGTTTAAAAACAAACTGATTCTCTCTCTTGCAAGAGCTGTACACTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp AGACCTGTCTACCGAGAGACCACTTTCATGCTAAGATaGTCAATACACGCAAACATTAGTTTGATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RPVYRETTFMLR*SIHANISLMKE
Trigger: CTCTTTCATCAAACTAATGTTTGCGTGTATTGACAATCTTAGCATGAAAGTGGTCTCTCGGTAGACAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp GAGGGACTGTGTTTACACGTTTCTTGTGAAACAGGATaGCTGAGGTTTGGAATCATTTCAGTTTGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EGLCLHVSCETG*LRFGIISVCKE
Trigger: TTCTTTGCAAACTGAAATGATTCCAAACCTCAGCAATCCTGTTTCACAAGAAACGTGTAAACACAGTCCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp ACATTTAAGACCATCTTTCTACAGTTGGAAGATCACTaGACTCAGCCACCTGAACACCAATATATACATCAT +
Preference number: 4 (lower is better)
Translates to: TFKTIFLQLEDH*TQPPEHQYIHH
Trigger: ATGATGTATATATTGGTGTTCAGGTGGCTGAGTCAAGTGATCTTCCAACTGTAGAAAGATGGTCTTAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
3UTR CAA 72 bp TGTAACTCATCACATTTACAAAATAAAGACACACTTTaGCCCCCACTCAGAATATCATTAGAAGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: CNSSHLQNKDTL*PPLRISLEEVP
Trigger: GGGTACCTCTTCTAATGATATTCTGAGTGGGGGCAAAAGTGTGTCTTTATTTTGTAAATGTGATGAGTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp GTGTCGAGGAAGGCGGCCAGGCGGCACAGGCGGTCCCCGGCCGGCTaGCGTTGTGCCACGACGCCGGCCAGTGTTAGTGGCATGTTGACC +
Preference number: 5 (lower is better)
Translates to: VSRKAARRHRRSPAG*RCATTPASVSGMLT
Trigger: GGTCAACATGCCACTAACACTGGCCGGCGTCGTGGCACAACGGCAGCCGGCCGGGGACCGCCTGTGCCGCCTGGCCGCCTTCCTCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 90 bp CGCTCGTCCGGCCGCCGGCTGCACAGTGTGCACGAGGCATATAGCTaGTGGAAGCCGAGCCAGGACAGGGCGAGCGCGGTGGCCGGGAAG +
Preference number: 5 (lower is better)
Translates to: RSSGRRLHSVHEAYS*WKPSQDRASAVAGK
Trigger: CTTCCCGGCCACCGCGCTCGCCCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCGGCCGGACGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 90 bp TCGTCCGGCCGCCGGCTGCACAGTGTGCACGAGGCATATAGCTGGTaGAAGCCGAGCCAGGACAGGGCGAGCGCGGTGGCCGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSGRRLHSVHEAYSW*KPSQDRASAVAGKV
Trigger: CACCTTCCCGGCCACCGCGCTCGCCCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCGGCCGGACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp AGACAGCAAAGCGCAGGCGCTCGTCCGGCCGCCGGCTGCACAGTGTaGACGAGGCATATAGCTGGTGGAAGCCGAGCCAGGACAGGGCGA +
Preference number: 5 (lower is better)
Translates to: RQQSAGARPAAGCTV*TRHIAGGSRARTGR
Trigger: TCGCCCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCGGCCGGACGAGCGCCTGCGCTTTGCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 90 bp AGCAGGTTGCCACACGTGAGGTTGAGAGTGAAGAGCGCCGGCGCCTaGCGGCGGATGTCAGCGCTGTGCAGGAGGCAGAGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SRLPHVRLRVKSAGA*RRMSALCRRQSSTS
Trigger: GCTGGTGCTGCTCTGCCTCCTGCACAGCGCTGACATCCGCCGCCAGGCGCCGGCGCTCTTCACTCTCAACCTCACGTGTGGCAACCTGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp CGTTCCCTCACACTGGGGTGTATGTCCACCAACAGCACAAGCGTCTaGATGGTGATCACGTCGATGCGCTTGCAGTGGAAGCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RSLTLGCMSTNSTSV*MVITSMRLQWKRAT
Trigger: GGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCTTGTGCTGTTGGTGGACATACACCCCAGTGTGAGGGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 90 bp AACAGCACAAGCGTCTGCATGGTGATCACGTCGATGCGCTTGCAGTaGAAGCGGGCCACCTTGAGCACCTTGAGGTACGTGAAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: NSTSVCMVITSMRLQ*KRATLSTLRYVKQS
Trigger: GCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCTTGTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp GTAGGCCAAGCACTTGGACAGCACTCCCCAGTGAGAGCCAATGGGTaGTGTGGAGAAGAGTTCCACCAGCCTGGTAATCACATAGGGTGC +
Preference number: 5 (lower is better)
Translates to: VGQALGQHSPVRANG*CGEEFHQPGNHIGC
Trigger: GCACCCTATGTGATTACCAGGCTGGTGGAACTCTTCTCCACAGCACCCATTGGCTCTCACTGGGGAGTGCTGTCCAAGTGCTTGGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp ATTGGTGTCGCAGCAAGGAATACACGAAGGGGTCAGAAGCGGCCTTaGTGTAGGCCAAGCACTTGGACAGCACTCCCCAGTGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: IGVAARNTRRGQKRP*CRPSTWTALPSESQ
Trigger: TTGGCTCTCACTGGGGAGTGCTGTCCAAGTGCTTGGCCTACAGCAAGGCCGCTTCTGACCCCTTCGTGTATTCCTTGCTGCGACACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp GTCAGCATCACGGCAATCACCAGGCAATGGTGGCAGTTATTGTCCACCCAGGAGAAGGTGCTGATCTTCTaGGTGGCACGCTGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: VSITAITRQWWQLLSTQEKVLIF*VARCRL
Trigger: GAGGCGACAGCGTGCCACCAAGAAGATCAGCACCTT...CTCCTGGGTGGACAATAACTGCCACCATTGCCTGGTGATTGCCGTGATGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 90 bp CTGTTGAAGATCCTGTTCAGGAGCTCCTTGCAGCTCCTGCGGTATTaGTGTCGCAGCAAGGAATACACGAAGGGGTCAGAAGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LLKILFRSSLQLLRY*CRSKEYTKGSEAAL
Trigger: CAAGGCCGCTTCTGACCCCTTCGTGTATTCCTTGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAGGATCTTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp ACTAGCACCCAGGAGGCTGAGGCATGGGGATTGCTTATCACTACCAGATCTACTTTGCCACACGTGAGGTaGAGAGTGAAGAGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: TSTQEAEAWGLLITTRSTLPHVR*RVKSAG
Trigger: GCCGGCGCTCTTCACTCTCAACCTCACGTGTGGCAA...AGTAGATCTGGTAGTGATAAGCAATCCCCATGCCTCAGCCTCCTGGGTGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp AGACACTCATCTCCCCTGGGGCCTAGCACAGGAAGCTCTGGCTTACGGGATATGAGTGTTAGTGGCATGTaGACCACGGTACACAGCAGG +
Preference number: 5 (lower is better)
Translates to: RHSSPLGPSTGSSGLRDMSVSGM*TTVHSR
Trigger: CCTGCTGTGTACCGTGGTCAACATGCCACTAACACT...CATATCCCGTAAGCCAGAGCTTCCTGTGCTAGGCCCCAGGGGAGATGAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAAGCCACCTTGAGCACCTaGAGGTACGTGAAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ISREILPTSEHPLDSVPEATLST*RYVKQS
Trigger: GCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGC...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp GAATGCACACTAAGCTCTACCCCACTGTATCCTTACCAGGCTGGTCCACTTCTATGGAAGCGGGCCACCTaGAGCACCTTGAGGTACGTG +
Preference number: 5 (lower is better)
Translates to: ECTLSSTPLYPYQAGPLLWKRAT*STLRYV
Trigger: CACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCA...TAGAAGTGGACCAGCCTGGTAAGGATACAGTGGGGTAGAGCTTAGTGTGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp ACAGGAACAGCATCTTGTACTAACTGCACTCTCTCATCAGTGGCACAGAGCACTATCACGTCGATGCGCTaGCAGTGGAAGCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TGTASCTNCTLSSVAQSTITSMR*QWKRAT
Trigger: GGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGAT...AGTGCTCTGTGCCACTGATGAGAGAGTGCAGTTAGTACAAGATGCTGTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp ATATCTCGGGAGATACTGCCCACTTCTGAGCACCCTCTGGACAGTGTTCCTGAACTGTTCAGGAGCTCCTaGCAGCTCCTGCGGTATTGG +
Preference number: 5 (lower is better)
Translates to: ISREILPTSEHPLDSVPELFRSS*QLLRYW
Trigger: CCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAG...TTCAGGAACACTGTCCAGAGGGTGCTCAGAAGTGGGCAGTATCTCCCGAGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 90 bp GGGTGCTGTGGAGAAGAGTTCCACCAGCCTGGTAATCACATAGGGTaGAAAGCACACAAGGAAGGTCCCTATGAAGGTGCTGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: GCCGEEFHQPGNHIG*KAHKEGPYEGADLL
Trigger: AAGAAGATCAGCACCTTCATAGGGACCTTCCTTGTGTGCTTTGCACCCTATGTGATTACCAGGCTGGTGGAACTCTTCTCCACAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS-3UTR CAA 90 bp GCTCCCAATGGATTGGCATGTATATTACAGGAACAGCATCTTGTACTAACTGCAACGGTACACAGCAGGTaGCCACACGTGAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: APNGLACILQEQHLVLTATVHSR*PHVRLR
Trigger: TCTCAACCTCACGTGTGGCAACCTGCTGTGTACCGT...TGCAGTTAGTACAAGATGCTGTTCCTGTAATATACATGCCAATCCATTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 72 bp AAGGCGGCCAGGCGGCACAGGCGGTCCCCGGCCGGCTaGCGTTGTGCCACGACGCCGGCCAGTGTTAGTGGC +
Preference number: 6 (lower is better)
Translates to: KAARRHRRSPAG*RCATTPASVSG
Trigger: GCCACTAACACTGGCCGGCGTCGTGGCACAACGGCAGCCGGCCGGGGACCGCCTGTGCCGCCTGGCCGCCTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp GCCACCCAGCGGTCGATGCTGAGCGCGGCCATGCTGAGCATGGAGTaGGCGGCCAGAAAGGTGTCGAGGAAGGCGGCCAGGCGGCACAGG +
Preference number: 6 (lower is better)
Translates to: ATQRSMLSAAMLSME*AARKVSRKAARRHR
Trigger: CCTGTGCCGCCTGGCCGCCTTCCTCGACACCTTTCTGGCCGCCAACTCCATGCTCAGCATGGCCGCGCTCAGCATCGACCGCTGGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp CGCCGGCTGCACAGTGTGCACGAGGCATATAGCTGGTaGAAGCCGAGCCAGGACAGGGCGAGCGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: RRLHSVHEAYSW*KPSQDRASAVA
Trigger: GGCCACCGCGCTCGCCCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp GGCCGCCGGCTGCACAGTGTGCACGAGGCATATAGCTaGTGGAAGCCGAGCCAGGACAGGGCGAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: GRRLHSVHEAYS*WKPSQDRASAV
Trigger: CACCGCGCTCGCCCTGTCCTGGCTCGGCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp CCACACGTGAGGTTGAGAGTGAAGAGCGCCGGCGCCTaGCGGCGGATGTCAGCGCTGTGCAGGAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PHVRLRVKSAGA*RRMSALCRRQS
Trigger: GCTCTGCCTCCTGCACAGCGCTGACATCCGCCGCCAGGCGCCGGCGCTCTTCACTCTCAACCTCACGTGTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp CGGTCGATGCTGAGCGCGGCCATGCTGAGCATGGAGTaGGCGGCCAGAAAGGTGTCGAGGAAGGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RSMLSAAMLSME*AARKVSRKAAR
Trigger: CCTGGCCGCCTTCCTCGACACCTTTCTGGCCGCCAACTCCATGCTCAGCATGGCCGCGCTCAGCATCGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 72 bp AGACAGCAAAGCGCAGGCGCTCGTCCGGCCGCCGGCTaGACAGTGTGCACGAGGCATATAGCTGGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: RQQSAGARPAAG*TVCTRHIAGGS
Trigger: GCTTCCACCAGCTATATGCCTCGTGCACACTGTGCAGCCGGCGGCCGGACGAGCGCCTGCGCTTTGCTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp TTGACCACGGTACACAGCAGGTTGCCACACGTGAGGTaGAGAGTGAAGAGCGCCGGCGCCTGGCGGCGGATG +
Preference number: 6 (lower is better)
Translates to: LTTVHSRLPHVR*RVKSAGAWRRM
Trigger: CATCCGCCGCCAGGCGCCGGCGCTCTTCACTCTCAACCTCACGTGTGGCAACCTGCTGTGTACCGTGGTCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp AGTGGCATGTTGACCACGGTACACAGCAGGTTGCCACACGTGAGGTaGAGAGTGAAGAGCGCCGGCGCCTGGCGGCGGATGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: SGMLTTVHSRLPHVR*RVKSAGAWRRMSAL
Trigger: CAGCGCTGACATCCGCCGCCAGGCGCCGGCGCTCTTCACTCTCAACCTCACGTGTGGCAACCTGCTGTGTACCGTGGTCAACATGCCACT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp ACGCCGGCCAGTGTTAGTGGCATGTTGACCACGGTACACAGCAGGTaGCCACACGTGAGGTTGAGAGTGAAGAGCGCCGGCGCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: TPASVSGMLTTVHSR*PHVRLRVKSAGAWR
Trigger: CCGCCAGGCGCCGGCGCTCTTCACTCTCAACCTCACGTGTGGCAACCTGCTGTGTACCGTGGTCAACATGCCACTAACACTGGCCGGCGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp GCCGGCTGCCGTTGTGCCACGACGCCGGCCAGTGTTAGTGGCATGTaGACCACGGTACACAGCAGGTTGCCACACGTGAGGTTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: AGCRCATTPASVSGM*TTVHSRLPHVRLRV
Trigger: CACTCTCAACCTCACGTGTGGCAACCTGCTGTGTACCGTGGTCAACATGCCACTAACACTGGCCGGCGTCGTGGCACAACGGCAGCCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp AGGGGTCAGAAGCGGCCTTGCTGTAGGCCAAGCACTTaGACAGCACTCCCCAGTGAGAGCCAATGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RGQKRPCCRPST*TALPSESQWVL
Trigger: CAGCACCCATTGGCTCTCACTGGGGAGTGCTGTCCAAGTGCTTGGCCTACAGCAAGGCCGCTTCTGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp CGTTGTGCCACGACGCCGGCCAGTGTTAGTGGCATGTaGACCACGGTACACAGCAGGTTGCCACACGTGAGG +
Preference number: 6 (lower is better)
Translates to: RCATTPASVSGM*TTVHSRLPHVR
Trigger: CCTCACGTGTGGCAACCTGCTGTGTACCGTGGTCAACATGCCACTAACACTGGCCGGCGTCGTGGCACAACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp AGCGTCTGCATGGTGATCACGTCGATGCGCTTGCAGTaGAAGCGGGCCACCTTGAGCACCTTGAGGTACGTG +
Preference number: 6 (lower is better)
Translates to: SVCMVITSMRLQ*KRATLSTLRYV
Trigger: CACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp AGCACAAGCGTCTGCATGGTGATCACGTCGATGCGCTaGCAGTGGAAGCGGGCCACCTTGAGCACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: STSVCMVITSMR*QWKRATLSTLR
Trigger: CCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCTTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp ATCACGTCGATGCGCTTGCAGTGGAAGCGGGCCACCTTGAGCACCTaGAGGTACGTGAAGCAGAGCACGATGAAGGAGAGCAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: ITSMRLQWKRATLST*RYVKQSTMKESRKL
Trigger: CAGCTTCCTGCTCTCCTTCATCGTGCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp TGCATGGTGATCACGTCGATGCGCTTGCAGTGGAAGCGGGCCACCTaGAGCACCTTGAGGTACGTGAAGCAGAGCACGATGAAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: CMVITSMRLQWKRAT*STLRYVKQSTMKES
Trigger: GCTCTCCTTCATCGTGCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp TCCACCAACAGCACAAGCGTCTGCATGGTGATCACGTCGATGCGCTaGCAGTGGAAGCGGGCCACCTTGAGCACCTTGAGGTACGTGAAG +
Preference number: 6 (lower is better)
Translates to: STNSTSVCMVITSMR*QWKRATLSTLRYVK
Trigger: CTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCTTGTGCTGTTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS TCA 72 bp GGTGTATGTCCACCAACAGCACAAGCGTCTGCATGGTaGTCACGTCGATGCGCTTGCAGTGGAAGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: GVCPPTAQASAW*SRRCACSGSGP
Trigger: TGGCCCGCTTCCACTGCAAGCGCATCGACGTGATCACCATGCAGACGCTTGTGCTGTTGGTGGACATACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 72 bp GCAGCAAGGAATACACGAAGGGGTCAGAAGCGGCCTTaGTGTAGGCCAAGCACTTGGACAGCACTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: AARNTRRGQKRP*CRPSTWTALPS
Trigger: ACTGGGGAGTGCTGTCCAAGTGCTTGGCCTACAGCAAGGCCGCTTCTGACCCCTTCGTGTATTCCTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp ATGCGCTTGCAGTGGAAGCGGGCCACCTTGAGCACCTaGAGGTACGTGAAGCAGAGCACGATGAAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: MRLQWKRATLST*RYVKQSTMKES
Trigger: GCTCTCCTTCATCGTGCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp ATCACGTCGATGCGCTTGCAGTGGAAGCGGGCCACCTaGAGCACCTTGAGGTACGTGAAGCAGAGCACGATG +
Preference number: 6 (lower is better)
Translates to: ITSMRLQWKRAT*STLRYVKQSTM
Trigger: CATCGTGCTCTGCTTCACGTACCTCAAGGTGCTCAAGGTGGCCCGCTTCCACTGCAAGCGCATCGACGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp GGTGCAAAGCACACAAGGAAGGTCCCTATGAAGGTGCTGATCTTCTaGGTGGCACGCTGTCGCCTCCGCTTCTGTTCCTCCAGACACCGT +
Preference number: 6 (lower is better)
Translates to: GAKHTRKVPMKVLIF*VARCRLRFCSSRHR
Trigger: ACGGTGTCTGGAGGAACAGAAGCGGAGGCGACAGCGTGCCACCAAGAAGATCAGCACCTTCATAGGGACCTTCCTTGTGTGCTTTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp TCCGCTTCTGTTCCTCCAGACACCGTTCCCTCACACTaGGGTGTATGTCCACCAACAGCACAAGCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SASVPPDTVPSH*GVCPPTAQASA
Trigger: TGCAGACGCTTGTGCTGTTGGTGGACATACACCCCAGTGTGAGGGAACGGTGTCTGGAGGAACAGAAGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp CACACAAGGAAGGTCCCTATGAAGGTGCTGATCTTCTaGGTGGCACGCTGTCGCCTCCGCTTCTGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: HTRKVPMKVLIF*VARCRLRFCSS
Trigger: GGAGGAACAGAAGCGGAGGCGACAGCGTGCCACCAAGAAGATCAGCACCTTCATAGGGACCTTCCTTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp GATCCTGTTCAGGAGCTCCTTGCAGCTCCTGCGGTATaGGTGTCGCAGCAAGGAATACACGAAGGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: DPVQELLAAPAV*VSQQGIHEGVR
Trigger: TCTGACCCCTTCGTGTATTCCTTGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 72 bp AGGGAGCGTCTGTTGAAGATCCTGTTCAGGAGCTCCTaGCAGCTCCTGCGGTATTGGTGTCGCAGCAAGGAA +
Preference number: 6 (lower is better)
Translates to: RERLLKILFRSS*QLLRYWCRSKE
Trigger: TTCCTTGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAGGATCTTCAACAGACGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CAA 90 bp TCTGTTGAAGATCCTGTTCAGGAGCTCCTTGCAGCTCCTGCGGTATaGGTGTCGCAGCAAGGAATACACGAAGGGGTCAGAAGCGGCCTT +
Preference number: 6 (lower is better)
Translates to: SVEDPVQELLAAPAV*VSQQGIHEGVRSGL
Trigger: AAGGCCGCTTCTGACCCCTTCGTGTATTCCTTGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAGGATCTTCAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS CCA 72 bp ATCCTGTTCAGGAGCTCCTTGCAGCTCCTGCGGTATTaGTGTCGCAGCAAGGAATACACGAAGGGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: ILFRSSLQLLRY*CRSKEYTKGSE
Trigger: TTCTGACCCCTTCGTGTATTCCTTGCTGCGACACCAATACCGCAGGAGCTGCAAGGAGCTCCTGAACAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5
CDS GCA 72 bp GGAGAAGAGTTCCACCAGCCTGGTAATCACATAGGGTaGAAAGCACACAAGGAAGGTCCCTATGAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: GEEFHQPGNHIG*KAHKEGPYEGA
Trigger: AGCACCTTCATAGGGACCTTCCTTGTGTGCTTTGCACCCTATGTGATTACCAGGCTGGTGGAACTCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045840.5