Pregenerated sensors for GPR22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044067Ensembl transcript IDs: ENSMUST00000057783.6, ENSMUST00000174480.3, ENSMUST00000176710.2, ENSMUST00000236002.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAATCAGGCCAAATGAGGAAGGAGGAATAAGGCTGGTGTTACTGTaGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: RIRPNEEGGIRLVLL*LSSLPLLLVPLYSR Trigger: CCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAGCCTTATTCCTCCTTCCTCATTTGGCCTGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CCA 90 bp | GTGACAGAAATGGTTCTCATCTTCTTCTCAGTCTCCCTATTTGTGTaGTTAACGTCTTGTATACAAAATAGTGTAGAGTTAAGTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: VTEMVLIFFSVSLFV*LTSCIQNSVELSEK Trigger: TTTTTCACTTAACTCTACACTATTTTGTATACAAGACGTTAACCACACAAATAGGGAGACTGAGAAGAAGATGAGAACCATTTCTGTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGACTGGAGACAGAGCTaGTGTATTTTGAAGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SCSITFIPPGTRQVSEVDDWRQS*CILKAW Trigger: CCAAGCCTTCAAAATACAGCAGCTCTGTCTCCAGTC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATAGGCTGGTGTTACTGTaGCTTTCTTCCCTCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SCSITFIPPGTRQVSEVDRLVLL*LSSLPL Trigger: TAAAGGGAGGGAAGAAAGCCACAGTAACACCAGCCT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATCCCTCCCTTTATTGTTaGTTCCTTTGTATAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SCSITFIPPGTRQVSEVDPSLYC*FLCIVG Trigger: GCCTACTATACAAAGGAACCAACAATAAAGGGAGGG...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGCTGTTGCTAAGTTTTaGTATTACTATGCATTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SCSITFIPPGTRQVSEVDAVAKF*YYYALP Trigger: TGGCAATGCATAGTAATACCAAAACTTAGCAACAGC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CAA 90 bp | CTGGTGTTACTGTGGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTaGTATAGTAGGCATATTACCCTTGTAATAGAATTCAGTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVLLWLSSLPLLLVP*YSRHITLVIEFSLF Trigger: GAAGAGACTGAATTCTATTACAAGGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CAA 90 bp | GGAATAAGGCTGGTGTTACTGTGGCTTTCTTCCCTCCCTTTATTGTaGGTTCCTTTGTATAGTAGGCATATTACCCTTGTAATAGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: GIRLVLLWLSSLPLL*VPLYSRHITLVIEF Trigger: GAATTCTATTACAAGGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAGCCTTATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTCCCTCCCTTTATTGTaGGTTCCTTTGTATAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: SCSITFIPPGTRQVSEVDSLPLL*VPLYSR Trigger: CCTACTATACAAAGGAACCAACAATAAAGGGAGGGA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTCTTCCCTCCCTTTATaGTTGGTTCCTTTGTATAGT | + |
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Preference number: 3 (lower is better) Translates to: SCSITFIPPGTRQVSEVDSSLPL*LVPLYS Trigger: ACTATACAAAGGAACCAACAATAAAGGGAGGGAAGA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CCA 72 bp | CCAAATGAGGAAGGAGGAATAAGGCTGGTGTTACTGTaGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PNEEGGIRLVLL*LSSLPLLLVPL Trigger: CAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAGCCTTATTCCTCCTTCCTCATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CCA 72 bp | ATGGTTCTCATCTTCTTCTCAGTCTCCCTATTTGTGTaGTTAACGTCTTGTATACAAAATAGTGTAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: MVLIFFSVSLFV*LTSCIQNSVEL Trigger: TAACTCTACACTATTTTGTATACAAGACGTTAACCACACAAATAGGGAGACTGAGAAGAAGATGAGAACCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATCCCACCACTGCTTTGTaGCATGTCTGTGGTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDPTTAL*HVCGLM Trigger: CATGAGACCACAGACATGTCACAAAGCAGTGGTGGG...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTGTCATCTCGCACCGTaGCGTTTGATTCAGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDCHLAP*RLIQTA Trigger: TGCAGTCTGAATCAAACGTCACGGTGCGAGATGACA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTCTCGTCGTTCCCGGTaGCGTTTCACGGCTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPSRRSR*RFTARR Trigger: CCGGCGAGCCGTGAAACGCCACCGGGAACGACGAGA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTCGCACCGTGACGTTTaGTTCAGACTGCATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDSHRDV*FRLHVD Trigger: ATCAACATGCAGTCTGAATCAAACGTCACGGTGCGA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATCCAGTGAGAGACACTTaGAAGCTTAGTGGGTATGAC | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDPVRDT*KLSGYD Trigger: GTCATACCCACTAAGCTTTCAAGTGTCTCTCACTGG...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATCTTCTTCTGTCCTGTTaGGAATCTAGTGCCTATGCG | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLLLSC*ESSAYA Trigger: CGCATAGGCACTAGATTCTCAACAGGACAGAAGAAG...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTGCCTGTTTACTGTTaGTTTATGGGCCTTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLPVYC*FMGLWA Trigger: AGCCCAAAGGCCCATAAAGCAACAGTAAACAGGCAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGGGTATGACAGTGGTTaGTACATATTGGTGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDGYDSG*YILVSM Trigger: CATCGACACCAATATGTACCAACCACTGTCATACCC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTGCTGTCGAAACACTTaGAAAGGAAACACAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDCCRNT*KGNTSF Trigger: GAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATCAGCAGTGTCTTGTTTaGCCATGTATTTCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDQQCLV*PCISTL Trigger: CAAAGTGGAAATACATGGGCAAACAAGACACTGCTG...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTAAGTTGGATTTCATaGAGTAAAGTACCAGGACGG | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLSWIS*SKVPGR Trigger: CCGTCCTGGTACTTTACTGCATGAAATCCAACTTAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTAGCATTACAGCTCTaGCCATTGTCAGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLALQL*PLSEFC Trigger: ACAGAATTCTGACAATGGGCAGAGCTGTAATGCTAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGAGCAGTTGGTGTTTTaGCTGTTTACTGTTGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDEQLVF*LFTVAL Trigger: TAAAGCAACAGTAAACAGGCAAAACACCAACTGCTC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGTGGTTGGTACATATTaGTGTCGATGTCATCAATGT | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDVVGTY*CRCHQC Trigger: ACATTGATGACATCGACACCAATATGTACCAACCAC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTTAGGATCTATCCATaGGTTGTGTATTACAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDFRIYP*VVYYSV Trigger: AACGCTGTAATACACAACTCATGGATAGATCCTAAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATAGCAAAAACGTTGATTaGTGTCGAAACACTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDSKNVD*CRNTCK Trigger: TTTGCAAGTGTTTCGACAGCAATCAACGTTTTTGCT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTGTCAGAATTCTGTTTaGAGGTTTTACAGAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SCSITFIPPGTRQVSEVDCQNSV*RFYRDV Trigger: GACATCTCTGTAAAACCTGCAAACAGAATTCTGACA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTGTCATCTCGCACCGTaGCGTTTGATTCAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPCHLAP*RLIQTA Trigger: TGCAGTCTGAATCAAACGTCACGGTGCGAGATGACA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCCGTGGAAACAGCAGATaGGAGCAGTGTTACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPRGNSR*EQCYSP Trigger: TGGAGAGTAACACTGCTCTCATCTGCTGTTTCCACG...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCCATTCCTCCCACCACTaGTTTGTGACATGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPHSSHH*FVTCLW Trigger: CCACAGACATGTCACAAAGCAGTGGTGGGAGGAATG...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTGAAGACTCTTTTCTaGCGTTCTCGTCGTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLKTLF*RSRRSR Trigger: CCGGGAACGACGAGAACGGCAGAAAAGAGTCTTCAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCCTTCTTCTGTCCTGTTaGGAATCTAGTGCCTATGCG | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLLLSC*ESSAYA Trigger: CGCATAGGCACTAGATTCTCAACAGGACAGAAGAAG...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCAGTGTTACTCTCCAGTaGGAGCAGAAGGATCACTAT | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPSVTLQ*EQKDHY Trigger: ATAGTGATCCTTCTGCTCTCACTGGAGAGTAACACT...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTGCTTTATGGGCCTTTaGGCTCACCATGGTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPCFMGL*AHHGSF Trigger: AAAACTACCATGGTGAGCCCAAAGGCCCATAAAGCA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| 3UTR CAA 72 bp | AGGCTGGTGTTACTGTGGCTTTCTTCCCTCCCTTTATaGTTGGTTCCTTTGTATAGTAGGCATATTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: RLVLLWLSSLPL*LVPLYSRHITL Trigger: AAGGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCGAAACTTTTGTCTGGTaGATGCATACAAGAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPETFVW*MHTREG Trigger: ACCCTCTCTTGTATGCATTCACCAGACAAAAGTTTC...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTGCTGTCGAAACACTTaGAAAGGAAACACAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPCCRNT*KGNTSF Trigger: GAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCCAGCAGTGTCTTGTTTaGCCATGTATTTCCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPQQCLV*PCISTL Trigger: CAAAGTGGAAATACATGGGCAAACAAGACACTGCTG...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CAA 72 bp | CTGGTGTTACTGTGGCTTTCTTCCCTCCCTTTATTGTaGGTTCCTTTGTATAGTAGGCATATTACCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LVLLWLSSLPLL*VPLYSRHITLV Trigger: TACAAGGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAGTAACACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCATCCCACACAAATTATaGCATCAAGTACATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPIPHKL*HQVHGG Trigger: ACCTCCATGTACTTGATGTCATAATTTGTGTGGGAT...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTAGCATTACAGCTCTaGCCATTGTCAGAATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLALQL*PLSEFC Trigger: ACAGAATTCTGACAATGGGCAGAGCTGTAATGCTAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCGTGGTTGGTACATATTaGTGTCGATGTCATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPVVGTY*CRCHQC Trigger: ACATTGATGACATCGACACCAATATGTACCAACCAC...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTCTTTTGGAGCAGTTaGTGTTTTGCCTGTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPFFWSS*CFACLL Trigger: CAGTAAACAGGCAAAACACCAACTGCTCCAAAAGAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTTAGGATCTATCCATaGGTTGTGTATTACAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPFRIYP*VVYYSV Trigger: AACGCTGTAATACACAACTCATGGATAGATCCTAAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCAGCAAAAACGTTGATTaGTGTCGAAACACTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPSKNVD*CRNTCK Trigger: TTTGCAAGTGTTTCGACAGCAATCAACGTTTTTGCT...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTGTCAGAATTCTGTTTaGAGGTTTTACAGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFLPSLYCWFLCIVGILPCQNSV*RFYRDV Trigger: GACATCTCTGTAAAACCTGCAAACAGAATTCTGACA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| 3UTR CAA 72 bp | CTGTGGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTaGTATAGTAGGCATATTACCCTTGTAATAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LWLSSLPLLLVP*YSRHITLVIEF Trigger: GAATTCTATTACAAGGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCCACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATACCAGGACGGTAAGGTaGCTGCCAAGCCCCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDTRTVR*LPSPST Trigger: CGTGCTGGGGCTTGGCAGCAACCTTACCGTCCTGGT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS TCA 90 bp | CCGGTGGCGTTTCACGGCTCGCCGGAGGGCAATTATTACAGAAACTaGAGTTCTCACACCAAACACGACATTCCTCCCACCACTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVAFHGSPEGNYYRN*SSHTKHDIPPTTAL Trigger: CAAAGCAGTGGTGGGAGGAATGTCGTGTTTGGTGTGAGAACTTCAGTTTCTGTAATAATTGCCCTCCGGCGAGCCGTGAAACGCCACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTTGCCTGTTTACTGTaGCTTTATGGGCCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDFACLL*LYGPLG Trigger: GCCCAAAGGCCCATAAAGCAACAGTAAACAGGCAAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
||
| CDS CCA 90 bp | AACGACATTTTGAAGACTCTTTTCTGCCGTTCTCGTCGTTCCCGGTaGCGTTTCACGGCTCGCCGGAGGGCAATTATTACAGAAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NDILKTLFCRSRRSR*RFTARRRAIITETE Trigger: TTCAGTTTCTGTAATAATTGCCCTCCGGCGAGCCGTGAAACGCCACCGGGAACGACGAGAACGGCAGAAAAGAGTCTTCAAAATGTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTACAGCTCTGCCCATaGTCAGAATTCTGTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLQLCP*SEFCLQ Trigger: CTGCAAACAGAATTCTGACAATGGGCAGAGCTGTAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGATTCAGACTGCATGTaGATTTCCAGAACAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDDSDCM*ISRTGE Trigger: TTCTCCTGTTCTGGAAATCAACATGCAGTCTGAATC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATAGTGGTTGGTACATATaGGTGTCGATGTCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDSGWYI*VSMSSM Trigger: CATTGATGACATCGACACCAATATGTACCAACCACT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTGCTGTCGAAACACTaGCAAAGGAAACACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLLSKH*QRKHKL Trigger: AAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATACAGCAGTGTCTTGTTaGCCCATGTATTTCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDTAVSC*PMYFHF Trigger: AAAGTGGAAATACATGGGCAAACAAGACACTGCTGT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS GCA 90 bp | AGAAATGTAGAAATAATCAATAACGACATTTTGAAGACTCTTTTCTaGCGTTCTCGTCGTTCCCGGTGGCGTTTCACGGCTCGCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNVEIINNDILKTLF*RSRRSRWRFTARRR Trigger: CCTCCGGCGAGCCGTGAAACGCCACCGGGAACGACGAGAACGGCAGAAAAGAGTCTTCAAAATGTCGTTATTGATTATTTCTACATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATATTCTTTTGGAGCAGTaGGTGTTTTGCCTGTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDILLEQ*VFCLFT Trigger: AGTAAACAGGCAAAACACCAACTGCTCCAAAAGAAT...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGAAAAACACATTCTTTaGGAGCAGTTGGTGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDEKHIL*EQLVFC Trigger: GCAAAACACCAACTGCTCCAAAAGAATGTGTTTTTC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS TCA 90 bp | AGCCCCAGCACGATCTCTAACATGAGAAATCCAGTGAGAGACACTTaGAAGCTTAGTGGGTATGACAGTGGTTGGTACATATTGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSTISNMRNPVRDT*KLSGYDSGWYILVS Trigger: CGACACCAATATGTACCAACCACTGTCATACCCACTAAGCTTTCAAGTGTCTCTCACTGGATTTCTCATGTTAGAGATCGTGCTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS CCA 90 bp | ACGTTGATTGCTGTCGAAACACTTGCAAAGGAAACACAAGCTTCGTaGAAACAGCAGATGAGAGCAGTGTTACTCTCCAGTGAGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLIAVETLAKETQAS*KQQMRAVLLSSESR Trigger: TCTGCTCTCACTGGAGAGTAACACTGCTCTCATCTGCTGTTTCCACGAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCAATCAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGTAATAGCAAAAACGTaGATTGCTGTCGAAACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDVIAKT*IAVETL Trigger: AAGTGTTTCGACAGCAATCAACGTTTTTGCTATTAC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATTTGTCAGAATTCTGTTaGCAGGTTTTACAGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDLSEFC*QVLQRC Trigger: ACATCTCTGTAAAACCTGCAAACAGAATTCTGACAA...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGACCTTTTGAAACTTTaGTCTGGTGAATGCATACAA | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDDLLKL*SGECIQ Trigger: TTGTATGCATTCACCAGACAAAAGTTTCAAAAGGTC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGTATCACATTCATTCCCCCAGGGACGAGGCAGGTCAGTGAGGTTGATGGATCTATCCATGAGTaGTGTATTACAGCGTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: SCSITFIPPGTRQVSEVDGSIHE*CITALL Trigger: TAATAACGCTGTAATACACAACTCATGGATAGATCC...ATCAACCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS GCA 90 bp | TCTGTCCAGAGTAATAGCAAAAACGTTGATTGCTGTCGAAACACTTaGAAAGGAAACACAAGCTTCGTGGAAACAGCAGATGAGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVQSNSKNVDCCRNT*KGNTSFVETADESS Trigger: ACTGCTCTCATCTGCTGTTTCCACGAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCAATCAACGTTTTTGCTATTACTCTGGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTACAGCTCTGCCCATaGTCAGAATTCTGTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLQLCP*SEFCLQ Trigger: CTGCAAACAGAATTCTGACAATGGGCAGAGCTGTAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCGGAGCAGTTGGTGTTTaGCCTGTTTACTGTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPGAVGV*PVYCCF Trigger: AAAGCAACAGTAAACAGGCAAAACACCAACTGCTCC...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS GCA 90 bp | TCGATGTCATCAATGTCATCTCGCACCGTGACGTTTGATTCAGACTaGATGTTGATTTCCAGAACAGGAGAAAAACACATTCTTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMSSMSSRTVTFDSD*MLISRTGEKHILLE Trigger: CTCCAAAAGAATGTGTTTTTCTCCTGTTCTGGAAATCAACATGCAGTCTGAATCAAACGTCACGGTGCGAGATGACATTGATGACATCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCGATTCAGACTGCATGTaGATTTCCAGAACAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPDSDCM*ISRTGE Trigger: TTCTCCTGTTCTGGAAATCAACATGCAGTCTGAATC...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCAGTGGTTGGTACATATaGGTGTCGATGTCATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPSGWYI*VSMSSM Trigger: CATTGATGACATCGACACCAATATGTACCAACCACT...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTGCTGTCGAAACACTaGCAAAGGAAACACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLLSKH*QRKHKL Trigger: AAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS TCA 90 bp | AAAGGTGATAGTACATCCCGAGCTCAGTATAGTATTCACTTGTACTaGCACACAGCAGTGTCTTGTTTGCCCATGTATTTCCACTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KGDSTSRAQYSIHLY*HTAVSCLPMYFHFE Trigger: TTCAAAGTGGAAATACATGGGCAAACAAGACACTGCTGTGTGTCAGTACAAGTGAATACTATACTGAGCTCGGGATGTACTATCACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS CCA 90 bp | TTCTGTCCTGTTGAGAATCTAGTGCCTATGCGGATGTTAAGAGCCTaGAGTATCTTAGTGTATGTGATCAACATGACTATAACTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FCPVENLVPMRMLRA*SILVYVINMTITVK Trigger: CTTCACAGTTATAGTCATGTTGATCACATACACTAAGATACTCCAGGCTCTTAACATCCGCATAGGCACTAGATTCTCAACAGGACAGAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTACTAAAAGGTCACTaGGGCCTAAACATAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLLKGH*GLNIEW Trigger: CCATTCTATGTTTAGGCCCAAGTGACCTTTTAGTAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS GCA 90 bp | TACAGAGATGTCATATCTGTCCAGAGTAATAGCAAAAACGTTGATTaGTGTCGAAACACTTGCAAAGGAAACACAAGCTTCGTGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: YRDVISVQSNSKNVD*CRNTCKGNTSFVET Trigger: TGTTTCCACGAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGCAATCAACGTTTTTGCTATTACTCTGGACAGATATGACATCTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCTTGTCAGAATTCTGTTaGCAGGTTTTACAGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPLSEFC*QVLQRC Trigger: ACATCTCTGTAAAACCTGCAAACAGAATTCTGACAA...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCCCTCCCTTTATTGTTGGTTCCTTTGTATAGTAGGCATATTACCCGACCTTTTGAAACTTTaGTCTGGTGAATGCATACAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLPSLYCWFLCIVGILPDLLKL*SGECIQ Trigger: TTGTATGCATTCACCAGACAAAAGTTTCAAAAGGTC...GGGTAATATGCCTACTATACAAAGGAACCAACAATAAAGGGAGGGAAGAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057783.6 ENSMUST00000236002.2 |
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| CDS TCA 90 bp | ACTGTCTTCATAGGTAACCTTTTTGTTTCTTTTAGGATCTATCCATaGGTTGTGTATTACAGCGTTATTAGGCATGGGATCAGCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVFIGNLFVSFRIYP*VVYYSVIRHGISFN Trigger: GTTGAAGCTGATCCCATGCCTAATAACGCTGTAATACACAACTCATGGATAGATCCTAAAAGAAACAAAAAGGTTACCTATGAAGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS CCA 72 bp | TTGAAGACTCTTTTCTGCCGTTCTCGTCGTTCCCGGTaGCGTTTCACGGCTCGCCGGAGGGCAATTATTACA | + |
|
Preference number: 6 (lower is better) Translates to: LKTLFCRSRRSR*RFTARRRAIIT Trigger: TGTAATAATTGCCCTCCGGCGAGCCGTGAAACGCCACCGGGAACGACGAGAACGGCAGAAAAGAGTCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
||
| CDS TCA 72 bp | TTTCACGGCTCGCCGGAGGGCAATTATTACAGAAACTaGAGTTCTCACACCAAACACGACATTCCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FHGSPEGNYYRN*SSHTKHDIPPT Trigger: GGTGGGAGGAATGTCGTGTTTGGTGTGAGAACTTCAGTTTCTGTAATAATTGCCCTCCGGCGAGCCGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
||
| CDS CCA 72 bp | GCTGTCGAAACACTTGCAAAGGAAACACAAGCTTCGTaGAAACAGCAGATGAGAGCAGTGTTACTCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AVETLAKETQAS*KQQMRAVLLSS Trigger: ACTGGAGAGTAACACTGCTCTCATCTGCTGTTTCCACGAAGCTTGTGTTTCCTTTGCAAGTGTTTCGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS GCA 72 bp | GAAATAATCAATAACGACATTTTGAAGACTCTTTTCTaGCGTTCTCGTCGTTCCCGGTGGCGTTTCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EIINNDILKTLF*RSRRSRWRFTA Trigger: AGCCGTGAAACGCCACCGGGAACGACGAGAACGGCAGAAAAGAGTCTTCAAAATGTCGTTATTGATTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
||
| CDS TCA 72 bp | AGTACATCCCGAGCTCAGTATAGTATTCACTTGTACTaGCACACAGCAGTGTCTTGTTTGCCCATGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: STSRAQYSIHLY*HTAVSCLPMYF Trigger: GAAATACATGGGCAAACAAGACACTGCTGTGTGTCAGTACAAGTGAATACTATACTGAGCTCGGGATGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS CAA 90 bp | TCATCAATGTCATCTCGCACCGTGACGTTTGATTCAGACTGCATGTaGATTTCCAGAACAGGAGAAAAACACATTCTTTTGGAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSMSSRTVTFDSDCM*ISRTGEKHILLEQL Trigger: CAACTGCTCCAAAAGAATGTGTTTTTCTCCTGTTCTGGAAATCAACATGCAGTCTGAATCAAACGTCACGGTGCGAGATGACATTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236002.2 |
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| CDS CCA 72 bp | GTTGAGAATCTAGTGCCTATGCGGATGTTAAGAGCCTaGAGTATCTTAGTGTATGTGATCAACATGACTATA | + |
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Preference number: 6 (lower is better) Translates to: VENLVPMRMLRA*SILVYVINMTI Trigger: TATAGTCATGTTGATCACATACACTAAGATACTCCAGGCTCTTAACATCCGCATAGGCACTAGATTCTCAAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057783.6 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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| CDS CAA 72 bp | TCCAAATGGATGTCATTAGCATTACAGCTCTGCCCATaGTCAGAATTCTGTTTGCAGGTTTTACAGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: SKWMSLALQLCP*SEFCLQVLQRC Trigger: ACATCTCTGTAAAACCTGCAAACAGAATTCTGACAATGGGCAGAGCTGTAATGCTAATGACATCCATTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057783.6 ENSMUST00000174480.3 ENSMUST00000176710.2 ENSMUST00000236002.2 |
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