Pregenerated sensors for GPR21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053164Ensembl transcript IDs: ENSMUST00000065441.7
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATaGTCAGAAGCATGTCGTGAAAGCAGCTGGCTCTCACACACTGTA | + |
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Preference number: 1 (lower is better) Translates to: PRKSTVMSLLHTCSR*SEACRESSWLSHTV Trigger: TACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CCA 90 bp | GCTGGAAGTAGGGTAGGGTGGATCTTTAATCCCAGCAGAGACAGGTaGATTTTTGTGAGTTCAGTCCAGTCTGGTCTAGATAGTGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: AGSRVGWIFNPSRDR*IFVSSVQSGLDSEF Trigger: AAACTCACTATCTAGACCAGACTGGACTGAACTCACAAAAATCCACCTGTCTCTGCTGGGATTAAAGATCCACCCTACCCTACTTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 90 bp | AAGCAACTTCTGCAAACTATGAAGGTTATCTGGATAGTCTGTAGCTaGTCTTACTTCTCTAGTGAACTGGAAGCAGAGATGGAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: KQLLQTMKVIWIVCS*SYFSSELEAEMERK Trigger: TTTTCTCTCCATCTCTGCTTCCAGTTCACTAGAGAAGTAAGAGCAGCTACAGACTATCCAGATAACCTTCATAGTTTGCAGAAGTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 90 bp | TTTGGGTTTCCTCCATTGTCCACTTCACTAAATATAACTGTTGTATaGACACTACAACCTCTAGCCAAAGGCAGAGGCCAATTAATTTTT | + |
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Preference number: 1 (lower is better) Translates to: FGFPPLSTSLNITVV*TLQPLAKGRGQLIF Trigger: AAAAATTAATTGGCCTCTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTGGACAATGGAGGAAACCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR TCA 90 bp | AAGCTGAAATCCAACAAAGCTATTTCTAACCCTGCATTTTCAGCATaGGCTCTAAATTCTGAATCATCAGAGCCAAACTTGGCTAATACT | + |
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Preference number: 1 (lower is better) Translates to: KLKSNKAISNPAFSA*ALNSESSEPNLANT Trigger: AGTATTAGCCAAGTTTGGCTCTGATGATTCAGAATTTAGAGCTCATGCTGAAAATGCAGGGTTAGAAATAGCTTTGTTGGATTTCAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 90 bp | TGCTATGGATATACAAGTAAAATTTACTTGCCTTGTTTGCAAGGGTaGAATACCAGAATGGTGTGTGTGTGTAAGGAAAGAAACATGTCT | + |
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Preference number: 1 (lower is better) Translates to: CYGYTSKIYLPCLQG*NTRMVCVCKERNMS Trigger: AGACATGTTTCTTTCCTTACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 90 bp | ATAAATTCTGCTATGGATATACAAGTAAAATTTACTTGCCTTGTTTaGAAGGGTGCAATACCAGAATGGTGTGTGTGTGTAAGGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: INSAMDIQVKFTCLV*KGAIPEWCVCVRKE Trigger: TTCTTTCCTTACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGCAGAATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 90 bp | ACAGAACAAATAAATTCTGCTATGGATATACAAGTAAAATTTACTTaGCTTGTTTGCAAGGGTGCAATACCAGAATGGTGTGTGTGTGTA | + |
|
Preference number: 1 (lower is better) Translates to: TEQINSAMDIQVKFT*LVCKGAIPEWCVCV Trigger: TACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGCAGAATTTATTTGTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 90 bp | CAGCCACGCCAGTGGGGAGAGGTGTCAACTATGGCTTTACTCCTTTaGAATCTGAGAACTGTAGTCACTTCCATGACATTTCAAAAACTG | + |
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Preference number: 2 (lower is better) Translates to: QPRQWGEVSTMALLL*NLRTVVTSMTFQKL Trigger: CAGTTTTTGAAATGTCATGGAAGTGACTACAGTTCTCAGATTCAAAAGGAGTAAAGCCATAGTTGACACCTCTCCCCACTGGCGTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 90 bp | TGGAGAACTCAGAATCTATTTCTCTCTTCCTCTCAGCAGCTGACCTaGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: WRTQNLFLSSSQQLT*NSRDPPANRTWNLK Trigger: CTTCAGATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGAGGAAGAGAGAAATAGATTCTGAGTTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATTTTACTTGCCTTGTTTaGAAGGGTGCAATACCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SQQLTLNSRDPPANRTWNFTCLV*KGAIPE Trigger: TTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAA...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTAGCATGAAGGAGACTTaGCCCAACCAGAGTCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NIRVKSRGISAYFIKYLCSMKET*PNQSPL Trigger: AAGGGGACTCTGGTTGGGCCAAGTCTCCTTCATGCT...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATGCTCAGAAGCAACTTCTCTAGTGAACTaGAAGCAGAGATGGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RKSTVMSLLHTCSRCSEATSLVN*KQRWRE Trigger: TTCTCTCCATCTCTGCTTCCAGTTCACTAGAGAAGT...TGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR TCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTAAAAATAGGATAGCATaGAGGAGACTTGGCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: NIRVKSRGISAYFIKYLCKNRIA*RRLGPT Trigger: GGTTGGGCCAAGTCTCCTTCATGCTATCCTATTTTT...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATGCTCAGAAGCAGCTTCACTGCACAGTTaGTTCATTTCAAAACTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RKSTVMSLLHTCSRCSEAASLHS*FISKLY Trigger: ATAGAGTTTTGAAATGAAGCAACTGTGCAGTGAAGC...TGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 90 bp | CAGAGCCAAACTTGGCTAATACTACATATAAAGAACAAGCAAGATTaGGAGAACTCAGAATCTATTTCTCTCTTCCTCTCAGCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QSQTWLILHIKNKQD*ENSESISLFLSAAD Trigger: GTCAGCTGCTGAGAGGAAGAGAGAAATAGATTCTGAGTTCTCCAAATCTTGCTTGTTCTTTATATGTAGTATTAGCCAAGTTTGGCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR TCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGAACTGTGATGCTAGCTaGCTATTTAGAAGACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQNCDAS*LFRRQT Trigger: TGTCTGTCTTCTAAATAGTCAGCTAGCATCACAGTT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR TCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGACAAAACCAGACAAGTaGGGCAAGAAATGTATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQTKPDK*GKKCIS Trigger: TGAGATACATTTCTTGCCTCACTTGTCTGGTTTTGT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR GCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGACTGTATGGCTTCACTaGACAGTTGCTTCATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQTVWLH*TVASFQ Trigger: TTGAAATGAAGCAACTGTGCAGTGAAGCCATACAGT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTACATTACTCATCCTATaGAGATTGCTCTCAAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NIRVKSRGISAYFIKYLCTLLIL*RLLSKG Trigger: GCCTTTTGAGAGCAATCTCCATAGGATGAGTAATGT...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR TCA 72 bp | ACTGCACACATGCTCACGATGCTCAGAAGCATGTCGTaGAAGCAGCTGGCTCTCACACACTGTATGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAHMLTMLRSMS*KQLALTHCMAS Trigger: TGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTGAGCATCGTGAGCATGTGTGCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CCA 72 bp | GCTGATGCTTTTCACACCCAGATTCAGCCACGCCAGTaGGGAGAGGTGTCAACTATGGCTTTACTCCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: ADAFHTQIQPRQ*GEVSTMALLLL Trigger: CAAAAGGAGTAAAGCCATAGTTGACACCTCTCCCCACTGGCGTGGCTGAATCTGGGTGTGAAAAGCATCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CCA 72 bp | TGCTCACGATGCTCAGAAGCATGTCGTGAAAGCAGCTaGCTCTCACACACTGTATGGCTTCACTGCACAGTT | + |
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Preference number: 3 (lower is better) Translates to: CSRCSEACRESS*LSHTVWLHCTV Trigger: AACTGTGCAGTGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTGAGCATCGTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | CCCAGAAAGAGCACTGTAATGTCATTACTGCACACATaGTCACGATGCTCAGAAGCATGTCGTGAAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PRKSTVMSLLHT*SRCSEACRESS Trigger: GCTGCTTTCACGACATGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CCA 72 bp | AGGGTAGGGTGGATCTTTAATCCCAGCAGAGACAGGTaGATTTTTGTGAGTTCAGTCCAGTCTGGTCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: RVGWIFNPSRDR*IFVSSVQSGLD Trigger: ATCTAGACCAGACTGGACTGAACTCACAAAAATCCACCTGTCTCTGCTGGGATTAAAGATCCACCCTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | CCTCCATTGTCCACTTCACTAAATATAACTGTTGTATaGACACTACAACCTCTAGCCAAAGGCAGAGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: PPLSTSLNITVV*TLQPLAKGRGQ Trigger: TTGGCCTCTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTGGACAATGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATGCTCAGAAGCAGGCTTCACTGCACAGTaGCTTCATTTCAAAACTCTA | + |
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Preference number: 3 (lower is better) Translates to: RKSTVMSLLHTCSRCSEAGFTAQ*LHFKTL Trigger: TAGAGTTTTGAAATGAAGCAACTGTGCAGTGAAGCC...TGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATTTTGGGTTTCCTCCATaGTCCACTTCACTAAATATA | + |
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Preference number: 3 (lower is better) Translates to: SQQLTLNSRDPPANRTWNFGFPP*STSLNI Trigger: TATATTTAGTGAAGTGGACAATGGAGGAAACCCAAA...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR TCA 72 bp | TATTTAGAAGACAGACAGTTTACATTGACCCTGGGCTaGTTGCGTCAGTGGACTCAGTTCTCATTGAAGACT | + |
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Preference number: 3 (lower is better) Translates to: YLEDRQFTLTLG*LRQWTQFSLKT Trigger: AGTCTTCAATGAGAACTGAGTCCACTGACGCAATCAGCCCAGGGTCAATGTAAACTGTCTGTCTTCTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | CTGCAAACTATGAAGGTTATCTGGATAGTCTGTAGCTaGTCTTACTTCTCTAGTGAACTGGAAGCAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: LQTMKVIWIVCS*SYFSSELEAEM Trigger: CATCTCTGCTTCCAGTTCACTAGAGAAGTAAGAGCAGCTACAGACTATCCAGATAACCTTCATAGTTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | CTGGCTCTCACACACTGTATGGCTTCACTGCACAGTTaGTTCATTTCAAAACTCTATAAAGTAATATTCCGT | + |
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Preference number: 3 (lower is better) Translates to: LALTHCMASLHS*FISKLYKVIFR Trigger: ACGGAATATTACTTTATAGAGTTTTGAAATGAAGCAACTGTGCAGTGAAGCCATACAGTGTGTGAGAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CCA 72 bp | AACATAAAATCAAAATTGGCTGGAAGTAGGGTAGGGTaGATCTTTAATCCCAGCAGAGACAGGTGGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: NIKSKLAGSRVG*IFNPSRDRWIF Trigger: AAAAATCCACCTGTCTCTGCTGGGATTAAAGATCCACCCTACCCTACTTCCAGCCAATTTTGATTTTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGAGCCATCCTTTCTCCTaGAAAATAGAGCGACTGAAT | + |
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Preference number: 3 (lower is better) Translates to: FNIRVKSRGISAYFIKYLSHPFS*KIERLN Trigger: ATTCAGTCGCTCTATTTTCAAGGAGAAAGGATGGCT...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CAA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGATTTTCACATTACAATaGGACAGCTGTCCCTCTATT | + |
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Preference number: 3 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQIFTLQ*DSCPSI Trigger: AATAGAGGGACAGCTGTCCAATTGTAATGTGAAAAT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | GCTATGGATATACAAGTAAAATTTACTTGCCTTGTTTaGAAGGGTGCAATACCAGAATGGTGTGTGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: AMDIQVKFTCLV*KGAIPEWCVCV Trigger: TACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGATGGCTTTACTCCTTTaGAATCTGAGAACTGTAGTC | + |
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Preference number: 3 (lower is better) Translates to: FNIRVKSRGISAYFIKYLMALLL*NLRTVV Trigger: GACTACAGTTCTCAGATTCAAAAGGAGTAAAGCCAT...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR GCA 72 bp | TATACAAGTAAAATTTACTTGCCTTGTTTGCAAGGGTaGAATACCAGAATGGTGTGTGTGTGTAAGGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: YTSKIYLPCLQG*NTRMVCVCKER Trigger: TCTTTCCTTACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATCCAGTCTCCCCATTCTaGCTGCTGAATCGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNPVSPF*LLNRAC Trigger: GCAAGCCCGATTCAGCAGCCAGAATGGGGAGACTGG...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | CAGAAGCATGTCGTGAAAGCAGCTGGCTCTCACACACTGTATGGCTTCACTGCACCAAAAGACAGAACCTaGCAGTTTCCAAGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKHVVKAAGSHTLYGFTAPKDRT*QFPSSP Trigger: TGGGCTACTTGGAAACTGTCAGGTTCTGTCTTTTGG...TGCAGTGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | CAGAAGCATGTCGTGAAAGCAGCTGGCTCTCACACACTGTATGGCTTCACTGCAGCAGGAAGACCAGGGTaGAATACAGCCAAATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QKHVVKAAGSHTLYGFTAAGRPG*NTAKSE Trigger: TTCTGATTTGGCTGTATTCCACCCTGGTCTTCCTGC...TGCAGTGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATGACAGAAAGGATGGCTaGTCTGATTACCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNDRKDG*SDYHPR Trigger: CCTGGGATGGTAATCAGAGCAGCCATCCTTTCTGTC...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | CAGAAGCATGTCGTGAAAGCAGCTGGCTCTCACACACTGTATGGCTTCACTGCACTGCTGAATCGGGCTTaGCTTTCGCTGATTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QKHVVKAAGSHTLYGFTALLNRA*LSLISF Trigger: AAAAGAAATCAGCGAAAGGCAAGCCCGATTCAGCAG...TGCAGTGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATAAGGGTCCTTGGCTGTaGTGTGACTTGCACAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNKGPWL*CDLHKK Trigger: CTTCTTGTGCAAGTCACACCACAGCCAAGGACCCTT...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | CAGAAGCATGTCGTGAAAGCAGCTGGCTCTCACACACTGTATGGCTTCACTGCATATATCTATCAATGCTaGTACAGGCCAGAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKHVVKAAGSHTLYGFTAYIYQC*YRPEKP Trigger: TGGCTTCTCTGGCCTGTATCAGCATTGATAGATATA...TGCAGTGAAGCCATACAGTGTGTGAGAGCCAGCTGCTTTCACGACATGCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTCCCCATTCTGGCTGCTaGATCGGGCTTGCCTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: NIRVKSRGISAYFIKYLCPHSGC*IGLAFR Trigger: GCGAAAGGCAAGCCCGATTCAGCAGCCAGAATGGGG...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATTTCCAAGTAGCCCAGTaGCAGAAGACAGAAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNFQVAQ*QKTERM Trigger: CATCCTTTCTGTCTTCTGGCACTGGGCTACTTGGAA...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATTCTTTTGTGTGCTGCTaGCAGATGCGGAAGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNSFVCC*QMRKML Trigger: CAACATCTTCCGCATCTGCCAGCAGCACACAAAAGA...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | AGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATGCTCAGAAGCACTGTGTAAGGGTCCTTaGCTGTGGTGTGACTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RKSTVMSLLHTCSRCSEALCKGP*LWCDLH Trigger: GTGCAAGTCACACCACAGCCAAGGACCCTTACACAG...TGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTGGCATAGCGCTTATCTaGACAGGTCTGGGGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NIRVKSRGISAYFIKYLCGIALI*TGLGFP Trigger: GGGGAACCCCAGACCTGTCCAGATAAGCGCTATGCC...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGAAAGGATGGCTGCTCTaGTTACCATCCCAGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQKGWLL*LPSQVE Trigger: CTCCACCTGGGATGGTAATCAGAGCAGCCATCCTTT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | AGAAAGAGCACTGTAATGTCATTACTGCACACATGCTCACGATGCTCAGAAGCACCAGCAAGAAGTAGATaGTGTATGGCAACCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RKSTVMSLLHTCSRCSEAPARSR*CMATRG Trigger: TCCTCTGGTTGCCATACATCATCTACTTCTTGCTGG...TGCTTCTGAGCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGCAGCTGACCTTGAACTCAAGAGACCCACCTGCCAATAGAACTTGGAATACAAAACCAAATACTTaGCAAGTCATGGCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQQLTLNSRDPPANRTWNTKPNT*QVMASS Trigger: TGAGGAGGCCATGACTTGCCAAGTATTTGGTTTTGT...ATTCCAAGTTCTATTGGCAGGTGGGTCTCTTGAGTTCAAGGTCAGCTGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTCCGGGTTTACCCCAGTaGAAGAAGGAAGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NIRVKSRGISAYFIKYLCPGLPQ*KKEGRK Trigger: CTTCCTGCCTTCCTTCTTCCACTGGGGTAAACCCGG...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTTATCTGGACAGGTCTaGGGTTCCCCAGTCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: FNIRVKSRGISAYFIKYLLSGQV*GSPVSP Trigger: TGGGGAGACTGGGGAACCCCAGACCTGTCCAGATAA...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTGGTGTGCCAGGACTCTaGACACCACTGAAATACATC | + |
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Preference number: 4 (lower is better) Translates to: NIRVKSRGISAYFIKYLCGVPGL*TPLKYI Trigger: GATGTATTTCAGTGGTGTGCAGAGTCCTGGCACACC...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGCTGATTTCTTTTGTGTaGTGCTGGCAGATGCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQLISFV*CWQMRK Trigger: CTTCCGCATCTGCCAGCAGCACACAAAAGAAATCAG...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 72 bp | CAGTGGGGAGAGGTGTCAACTATGGCTTTACTCCTTTaGAATCTGAGAACTGTAGTCACTTCCATGACATTT | + |
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Preference number: 4 (lower is better) Translates to: QWGEVSTMALLL*NLRTVVTSMTF Trigger: AAATGTCATGGAAGTGACTACAGTTCTCAGATTCAAAAGGAGTAAAGCCATAGTTGACACCTCTCCCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGATTTCTTTTGTGTGCTaGTGGCAGATGCGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQISFVC*WQMRKM Trigger: CATCTTCCGCATCTGCCAGCAGCACACAAAAGAAAT...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGCCCTTTAGTCCTCGCTaGAAAACACTGTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FNIRVKSRGISAYFIKYLPFSPR*KTLLER Trigger: TCTCTCCAACAGTGTTTTCCAGCGAGGACTAAAGGG...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CCA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGGAAGTAGATGATGTATaGCAACCAGAGGACATAAAA | + |
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Preference number: 4 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQEVDDV*QPEDIK Trigger: TTTTATGTCCTCTGGTTGCCATACATCATCTACTTC...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 72 bp | TGCTATGGATATACAAGTAAAATTTACTTGCCTTGTTaGCAAGGGTGCAATACCAGAATGGTGTGTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CYGYTSKIYLPC*QGCNTRMVCVC Trigger: ACACACACACACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | AACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGTGATACTCTTCAGAACTaGCACTACAAAACCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: NIRVKSRGISAYFIKYLCDTLQN*HYKTKY Trigger: GTATTTGGTTTTGTAGTGTCAGTTCTGAAGAGTATC...ACACAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR TCA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGGAGAGACTGTAAATaGTACAGTTGCAGAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: FNIRVKSRGISAYFIKYLWRDCK*YSCRNC Trigger: ACAGTTTCTGCAACTGTATCATTTACAGTCTCTCCA...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR GCA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGCAAGAGGTCAGCATATaGCATTGTCTGAATAAAATA | + |
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Preference number: 4 (lower is better) Translates to: FNIRVKSRGISAYFIKYLQEVSI*HCLNKI Trigger: TATTTTATTCAGACAATGGCATATGCTGACCTCTTG...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 72 bp | CTGTTAGAAGATAACCAATTGCACATAAATTCCAACTaGCATTTAAGAATCCAGAAAGGGGCAAGAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: LLEDNQLHINSN*HLRIQKGARKW Trigger: CCATTTTCTTGCCCCTTTCTGGATTCTTAAATGCAAGTTGGAATTTATGTGCAATTGGTTATCTTCTAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| 3UTR CAA 72 bp | AATAAATTCTGCTATGGATATACAAGTAAAATTTACTaGCCTTGTTTGCAAGGGTGCAATACCAGAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: NKFCYGYTSKIY*PCLQGCNTRMV Trigger: CACCATTCTGGTATTGCACCCTTGCAAACAAGGCAAGTAAATTTTACTTGTATATCCATAGCAGAATTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS CCA 90 bp | TACTCTTCAGAACTGACACTACAAAACCAAATACTTGGCAAGTCATaGCCTCCTCAATCGGAAGAGGGTAGTAGAGGAGTGATAAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: YSSELTLQNQILGKS*PPQSEEGSRGVIRK Trigger: CTTCCTTATCACTCCTCTACTACCCTCTTCCGATTGAGGAGGCCATGACTTGCCAAGTATTTGGTTTTGTAGTGTCAGTTCTGAAGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CAA 90 bp | CACTTCACTAAATATAACTGTTGTATGCACACTACAACCTCTAGCCAAAGGCAGCAGATGCGGAAGATGTaGAAATACGTGAAGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: HFTKYNCCMHTTTSSQRQQMRKM*KYVKQT Trigger: TGTCTGCTTCACGTATTTCAACATCTTCCGCATCTG...CTGCCTTTGGCTAGAGGTTGTAGTGTGCATACAACAGTTATATTTAGTGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CAA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGGCTGCTGAATCGGGCTaGCCTTTCGCTGATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FNIRVKSRGISAYFIKYLAAESG*PFADFF Trigger: AAAGAAATCAGCGAAAGGCAAGCCCGATTCAGCAGC...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CAA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTGGCTGTGGTGTGACTaGCACAAGAAGTACACAGAG | + |
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Preference number: 5 (lower is better) Translates to: FNIRVKSRGISAYFIKYLWLWCD*HKKYTE Trigger: CTCTGTGTACTTCTTGTGCAAGTCACACCACAGCCA...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS-3UTR CAA 90 bp | TTTAACATCAGGGTGAAAAGCCGAGGCATATCTGCCTATTTTATAAAGTATCTGTACAAAACCAAATACTaGGCAAGTCATGGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: FNIRVKSRGISAYFIKYLYKTKY*ASHGLL Trigger: GAGGAGGCCATGACTTGCCAAGTATTTGGTTTTGTA...CAGATACTTTATAAAATAGGCAGATATGCCTCGGCTTTTCACCCTGATGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS CCA 72 bp | CGGGCTTGCCTTTCGCTGATTTCTTTTGTGTGCTGCTaGCAGATGCGGAAGATGTTGAAATACGTGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RACLSLISFVCC*QMRKMLKYVKQ Trigger: CTGCTTCACGTATTTCAACATCTTCCGCATCTGCCAGCAGCACACAAAAGAAATCAGCGAAAGGCAAGCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS GCA 72 bp | GAACAATGTGAAGTAGGAGTTGGTGTGCCAGGACTCTaGACACCACTGAAATACATCTCCATGATATCCGGG | + |
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Preference number: 6 (lower is better) Translates to: EQCEVGVGVPGL*TPLKYISMISG Trigger: CCCGGATATCATGGAGATGTATTTCAGTGGTGTGCAGAGTCCTGGCACACCAACTCCTACTTCACATTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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| CDS CCA 72 bp | GAACTGACACTACAAAACCAAATACTTGGCAAGTCATaGCCTCCTCAATCGGAAGAGGGTAGTAGAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ELTLQNQILGKS*PPQSEEGSRGV Trigger: CACTCCTCTACTACCCTCTTCCGATTGAGGAGGCCATGACTTGCCAAGTATTTGGTTTTGTAGTGTCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065441.7 |
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